>ISPG_PARUW (Q6MD85) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 654

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 364 RQKYCESIHQTRRRKTRTVMVGNVALG 444
           ++KYCE+IHQT RR TR V VGNV +G
Sbjct: 3   QKKYCEAIHQTERRPTRIVNVGNVGIG 29

>IF2_STIAU (P55875) Translation initiation factor IF-2|
          Length = 1054

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -1

Query: 284 SALPLA-DPILSAPGTERILAKSTLLV*PTPPSRT-LTYGSGAGATPVAMAMPMPKLRKL 111
           +A P+A +P + AP TE  +A + +   PTPP+RT +   SG  A     A P+P   K 
Sbjct: 166 AAAPVAPEPTVEAPKTEAPVAAAPIAEAPTPPARTEVPVTSGRRAASCRGAAPLPCSGKD 225

Query: 110 AYAILQTPRST 78
             A+  +P+S+
Sbjct: 226 PLALNSSPQSS 236

>ISPG_PROMA (Q7VBS7) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 407

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 391 QTRRRKTRTVMVGNVALGS 447
           Q +RRKTR+VMVGN+ +GS
Sbjct: 21  QIQRRKTRSVMVGNIGIGS 39

>NPW_HUMAN (Q8N729) Neuropeptide W precursor (Preproprotein L8) (hPPL8)|
           [Contains: Neuropeptide W-23 (NPW23) (hL8); Neuropeptide
           W-30 (NPW30) (hL8C)]
          Length = 165

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +1

Query: 277 RALVVKSSSTESDTMELEPASEGSPLLVPRQKYCESIHQTRRRKTR 414
           RAL   +     DT+  EPA+  +PLL+P   + + + +TRRR ++
Sbjct: 64  RALRAAAGPLARDTLSPEPAAREAPLLLP--SWVQELWETRRRSSQ 107

>MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)|
          Length = 344

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -1

Query: 293 LTTSALPLADPILSAPGTERILAKSTLLV*PTPPSRTLTYGSGAGAT 153
           +T +  P+AD   S PG + I   +T LV PTP    +   SG+ +T
Sbjct: 108 VTNTQKPVADNETSEPGVDSIEQNATPLVVPTPIPEKVPNSSGSEST 154

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 9   PASLPSAGRPATRDEGGGEAPRDGAAR 89
           P   P AG+P +   GGG+ P  GAAR
Sbjct: 26  PGPGPGAGKPPSAPAGGGQLPAAGAAR 52

>PIV6_ADE12 (P35988) Minor capsid protein 6 precursor (Minor capsid protein VI)|
           [Contains: Protease cofactor]
          Length = 265

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
 Frame = -1

Query: 293 LTTSALPLADPILSAPGTERILAKS-----TLLV*PTP-PSRTLTYGS-GAGATPVAMAM 135
           L+ +  P+  PIL  P   R+  K+     TL + P P P+     GS    + PVA  +
Sbjct: 166 LSPTTYPMTKPIL--PMATRVYGKNENVPMTLELPPLPEPTIADPVGSVPVASVPVASTV 223

Query: 134 PMPKLRKLAYAILQTPRST 78
             P +R +A A L+ PRS+
Sbjct: 224 SRPAVRPVAVASLRNPRSS 242

>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (AD56)
          Length = 864

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -1

Query: 203 PTPPSRTLTYGSGAGATPVAMAMPMPKLRKLAYAILQTPRSTVPRRLSSALVPRRGPPSR 24
           P PP R         A+ V+   P+P  R L       P + VP++L +AL  R  PP+R
Sbjct: 747 PGPPQRAQQMTGTKQASVVSF--PVPPSRPL-------PPNPVPKKLQAALADRSNPPTR 797

>ISPG_SYNPX (Q7U712) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 398

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 391 QTRRRKTRTVMVGNVALGS 447
           Q  RR TRTVMVG+VA+GS
Sbjct: 11  QIHRRITRTVMVGDVAIGS 29

>TYTR_TRYBB (P39051) Trypanothione reductase (EC 1.8.1.12) (TR)|
           (N(1),N(8)-bis(glutathionyl)spermidine reductase)
          Length = 492

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = -1

Query: 344 PSEAGSSSMVSDSVLELLTTSALPLADPILSAPGTERILAKSTLLV*PTPPSRTLTYGSG 165
           P  A    + +D +L  L T + P    I   PG E  ++ +     P PP R LT G G
Sbjct: 143 PKSAVKERLQADHIL--LATGSWPQMPAI---PGVEHCISSNEAFYLPEPPRRVLTVGGG 197

>MOT3_HUMAN (O95907) Monocarboxylate transporter 3 (MCT 3)|
          Length = 504

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 339 GGRLELHGIRL--CT*ALDHERPASCGPHPQRTGNGEDLGEVDALGVADASVADLDVRKR 166
           GG L L G+ L  C        P   GP P+R   G+  G  DA G A+A  A L +R+ 
Sbjct: 175 GGFLLLGGLLLHCCACGAVMRPPPGPGPRPRRDSAGDRAG--DAPGEAEADGAGLQLREA 232

Query: 165 S 163
           S
Sbjct: 233 S 233

>ASPM_CANFA (P62286) Abnormal spindle-like microcephaly-associated protein|
           homolog (Fragment)
          Length = 3452

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 347 LPSEAGSSSMVSDSVLELLT-TSALPLADPILSAPGTERILAKSTLLV*PTPPSRT 183
           L S AG    V+D++ E     S LP+ DP+ S P + +I+         TPPS+T
Sbjct: 515 LNSVAGEFEKVTDNIKEKDGFQSCLPVIDPVFSKPKSYKIVV--------TPPSKT 562

>GIDA_CHLMU (Q9PJP3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 610

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -3

Query: 315 IRLCT*ALDHERPASCGPHPQRTGNGEDLGEVDALGVADASVADL 181
           + L T  LD     SC P     G G  + E+DALG   A V DL
Sbjct: 33  VLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDALGGVMAEVTDL 77

>Y989_MYCBO (P59978) Hypothetical protein Mb0989c|
          Length = 160

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -1

Query: 185 TLTYGSGAGATPVAMAMPMPKLRKLAYAILQTPRSTVPRRLSSALVPRRGPPSR-WQRRG 9
           T+ Y +G        A+P P L   + A  Q   +T  RR S+   P   PP R W RR 
Sbjct: 66  TIAYATGT-------ALPPPDLSSYSPADQQAILNTAIRRASNVCWPTPRPPMRIWPRRF 118

Query: 8   EA 3
           +A
Sbjct: 119 DA 120

>Y964_MYCTU (P71546) Hypothetical protein Rv0964c/MT0992.1|
          Length = 160

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -1

Query: 185 TLTYGSGAGATPVAMAMPMPKLRKLAYAILQTPRSTVPRRLSSALVPRRGPPSR-WQRRG 9
           T+ Y +G        A+P P L   + A  Q   +T  RR S+   P   PP R W RR 
Sbjct: 66  TIAYATGT-------ALPPPDLSSYSPADQQAILNTAIRRASNVCWPTPRPPMRIWPRRF 118

Query: 8   EA 3
           +A
Sbjct: 119 DA 120

>MCPH1_PONPY (P61594) Microcephalin|
          Length = 839

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
 Frame = -3

Query: 258 PQRTGNGEDLGEVDALGVADASVADLDVR------KRSRCHPGGHGYAY 130
           PQ+TGNGE L  +  +   ++S  +  +R      K   C P G+G++Y
Sbjct: 484 PQKTGNGEGLATLSCVTSEESSAPEEALRCCRQAGKEDAC-PEGNGFSY 531

>DNAJ_DEIRA (Q9RUG2) Chaperone protein dnaJ|
          Length = 376

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = +1

Query: 193 GGVGYTKSVDFAKILSVPGALRMGSARGRALVVKSSSTESD---TMELEPASEGSPLLVP 363
           GGVG+     F ++    GA  MG  RGR    +    E++   T+E   A E   + V 
Sbjct: 86  GGVGFDPMDIFEQLFG--GAAGMGG-RGRRGPARGDDLETEVRITLEQARAGEEVEVTVD 142

Query: 364 RQKYCESIHQTR 399
           R   CE  H TR
Sbjct: 143 RLTECEHCHGTR 154

>INO80_EMENI (Q5BAZ5) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1612

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 203 PTPPSRTLTYGSGAGATPVAMAMPMPKLRKLAYAILQTPRSTVPRRLSSALVPRRG 36
           P+P    L   +G   TP   + P P+ +  A++   TP+  +PR  S +L+P  G
Sbjct: 63  PSPLPGALPPLNGGAPTPAHPSDPSPQYQ--AHSAAGTPQYPLPRPYSGSLLPASG 116

>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1371

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
 Frame = -1

Query: 263 PILSAPGTERILAKSTLLV*PTPPSRTL---TYGSGAGATPVAMAMPMPKL-RKLAYAIL 96
           P    PGTER+L  S        PSR L   T+  G  AT        P+L R+   ++ 
Sbjct: 406 PFREPPGTERVLTSS--------PSRQLVGRTFSDGLAATRTLQPPESPRLGRRGLDSMR 457

Query: 95  QTP--RSTVPRRLSSALVPRRGPPSRWQR 15
           + P    ++ RR  S L  R  P  +  R
Sbjct: 458 ELPPLSPSLSRRALSPLPARTAPDPKLSR 486

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
 Frame = -1

Query: 290 TTSALPLADPILSAPGTERILAKSTLLV*PTPPSRTLTYGS--GAGATPVAMAMPMPKLR 117
           +TSA P+   I S+   ER+ + S     P PP    T  S   +   P+A     P + 
Sbjct: 226 STSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAIN 285

Query: 116 KLAYAILQTPRSTVPRRLSSALVPRRGPPSRWQRR 12
             +   L  P S V     +A   R  PP    RR
Sbjct: 286 STSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRR 320

>GIDA_CHLTR (O84506) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 610

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 315 IRLCT*ALDHERPASCGPHPQRTGNGEDLGEVDALGVADASVADL 181
           + L T  LD     SC P     G G  + E+DALG   A + DL
Sbjct: 33  VLLLTSNLDTIAKLSCNPAVGGIGKGHIVREIDALGGIMAEITDL 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,173,976
Number of Sequences: 219361
Number of extensions: 1340465
Number of successful extensions: 4901
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4895
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)