ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl02h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
3dbj|AK068644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 188 1e-44
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 188 1e-44
6emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 188 1e-44
7emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 188 1e-44
8gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Ho... 46 0.10
9gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cance... 44 0.40
10ref|NM_006160.2| Homo sapiens neurogenic differentiation 2 (NEUR... 42 1.6
11emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, ... 42 1.6
12gb|BC022481.1| Homo sapiens neurogenic differentiation 2, mRNA (... 42 1.6
13gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, com... 42 1.6
14emb|CR624963.1| full-length cDNA clone CS0DF008YN08 of Fetal bra... 42 1.6
15emb|CR590531.1| full-length cDNA clone CS0DF027YM01 of Fetal bra... 42 1.6
16dbj|AB021742.1| Homo sapiens NDRF mRNA for neuroD-related factor... 42 1.6
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18gb|AF177040.1| Synthetic construct clone pH77(p7)-J6S hepatitis ... 42 1.6
19gb|AF177039.1| Synthetic construct clone pH77-J6S hepatitis C vi... 42 1.6
20gb|AF177038.1| Synthetic construct clone pH77(p7)CV-J6S hepatiti... 42 1.6
21gb|AF177037.1| Synthetic construct clone pH77CV-J6S hepatitis C ... 42 1.6
22gb|AF290978.1|AF290978 Hepatitis C virus isolate colonel complet... 42 1.6
23dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AK063692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26gb|U58681.1|HSU58681 Homo sapiens neurogenic basic-helix-loop-he... 42 1.6
27gb|AF011753.1|AF011753 Hepatitis C virus strain H77 pH21 polypro... 42 1.6
28gb|AF011752.1|AF011752 Hepatitis C virus strain H77 pCV-H11 poly... 42 1.6
29gb|AF011751.1|AF011751 Hepatitis C virus strain H77 pCV-H77C pol... 42 1.6
30gb|AF009606.1|AF009606 Hepatitis C virus polyprotein gene, compl... 42 1.6
31gb|M67463.1|HPCCGAA Hepatitis C virus, complete genome 42 1.6
32gb|L24391.1|ASTDBP Arena sativa DNA binding protein (PF-1) mRNA,... 42 1.6
33gb|BT020513.1| Arabidopsis thaliana At5g24520 gene, complete cds 40 6.2
34gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 40 6.2
35ref|NM_122360.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GL... 40 6.2
36ref|NM_180739.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GL... 40 6.2
37ref|NM_180738.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GL... 40 6.2
38gb|BT020231.1| Arabidopsis thaliana At5g24520 gene, complete cds 40 6.2
39ref|XM_473969.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
40gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
41gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 6.2
42gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, com... 40 6.2
43ref|XM_607249.2| PREDICTED: Bos taurus similar to Neurogenic dif... 40 6.2
44gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
45gb|BT011856.1| Arabidopsis thaliana At5g24520 mRNA sequence 40 6.2
46ref|XM_751925.1| Ustilago maydis 521 hypothetical protein (UM008... 40 6.2
47emb|AM055906.1| Hepatitis C virus partial NS5A gene for non stru... 40 6.2
48ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.2
49ref|XM_760877.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.2
50ref|XM_853802.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 6.2
51ref|XM_844389.1| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 6.2
52emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
53emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
54emb|AJ586862.1| Matthiola incana partial ttg1 gene for transpare... 40 6.2
55emb|AJ586861.1| Matthiola incana partial ttg1 gene for transpare... 40 6.2
56dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 6.2
57ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobuli... 40 6.2
58ref|XM_685829.1| PREDICTED: Danio rerio similar to MGC80493 prot... 40 6.2
59dbj|AK048555.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 6.2
60dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
61dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
62dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
64emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
65emb|BX830220.1|CNS0A18T Arabidopsis thaliana Full-length cDNA Co... 40 6.2
66emb|BX832324.1|CNS0A158 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
67emb|BX831455.1|CNS0A0UO Arabidopsis thaliana Full-length cDNA Co... 40 6.2
68emb|BX831165.1|CNS0A0UA Arabidopsis thaliana Full-length cDNA Co... 40 6.2
69emb|BX830656.1|CNS0A0Q5 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
70dbj|AB117764.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.2
71dbj|AB117763.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.2
72dbj|AB117762.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.2
73dbj|AB117761.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.2
74dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
75dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
76dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
77dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
78emb|AL845312.3| Zebrafish DNA sequence from clone DKEY-287F10, c... 40 6.2
79dbj|AB010068.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.2
80ref|XM_561521.1| Anopheles gambiae str. PEST ENSANGP00000028107 ... 40 6.2
81emb|AJ251523.1|ATH251523 Arabidopsis thaliana ecotype Estland tt... 40 6.2
82emb|AJ251522.1|ATH251522 Arabidopsis thaliana ecotype Estland TT... 40 6.2
83emb|AJ133743.1|ATH133743 Arabidopsis thaliana ttg1 gene 40 6.2
84dbj|AK101027.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
85dbj|D90360.1|MUSCYTK Mus musculus gene for cytokeratin endo A, c... 40 6.2
86emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
87emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
88emb|AJ875188.1| Malcolmia flexuosa subsp. naxensis partial ttg1 ... 40 6.2
89emb|AJ875187.1| Matthiola tricuspidata partial ttg1 gene for tra... 40 6.2
90emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chro... 40 6.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Plus

                                                                          
Query: 355    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759

                                                             
Query: 415    ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
              || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 644806



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 43     gctagggttttcgccatggccaccgcccacc 73
              |||||||||||||||||||| ||| ||||||
Sbjct: 644399 gctagggttttcgccatggctaccacccacc 644429



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 11515386 gagaggagaagctagggttt 11515367
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Plus

                                                                          
Query: 355    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010

                                                             
Query: 415    ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
              || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 609057



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 43     gctagggttttcgccatggccaccgcccacc 73
              |||||||||||||||||||| ||| ||||||
Sbjct: 608650 gctagggttttcgccatggctaccacccacc 608680
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>dbj|AK068644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J09, full
           insert sequence
          Length = 3185

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Plus

                                                                       
Query: 355 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 390

                                                          
Query: 415 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
           || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 391 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 437



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 43 gctagggttttcgccatggccaccgcccacc 73
          |||||||||||||||||||| ||| ||||||
Sbjct: 30 gctagggttttcgccatggctaccacccacc 60
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Plus

                                                                          
Query: 355    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010

                                                             
Query: 415    ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
              || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 609057



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 43     gctagggttttcgccatggccaccgcccacc 73
              |||||||||||||||||||| ||| ||||||
Sbjct: 608650 gctagggttttcgccatggctaccacccacc 608680
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Plus

                                                                          
Query: 355    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759

                                                             
Query: 415    ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
              || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 644806



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 43     gctagggttttcgccatggccaccgcccacc 73
              |||||||||||||||||||| ||| ||||||
Sbjct: 644399 gctagggttttcgccatggctaccacccacc 644429



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 11515057 gagaggagaagctagggttt 11515038
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Minus

                                                                          
Query: 355    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134021 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 133962

                                                             
Query: 415    ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
              || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 133961 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 133915



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 43     gctagggttttcgccatggccaccgcccacc 73
              |||||||||||||||||||| ||| ||||||
Sbjct: 134322 gctagggttttcgccatggctaccacccacc 134292
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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 115859

 Score =  188 bits (95), Expect = 1e-44
 Identities = 104/107 (97%)
 Strand = Plus / Minus

                                                                        
Query: 355  cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4143 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 4084

                                                           
Query: 415  ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagct 461
            || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 4083 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagct 4037



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 43   gctagggttttcgccatggccaccgcccacc 73
            |||||||||||||||||||| ||| ||||||
Sbjct: 4444 gctagggttttcgccatggctaccacccacc 4414
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>gb|AC122587.5| Rattus norvegicus  BAC CH230-173H6 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 202972

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 82    ctccacccctcccccattcccaa 104
             |||||||||||||||||||||||
Sbjct: 80196 ctccacccctcccccattcccaa 80174
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>gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163031

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 72    cctcgagctcctccacccctccccca 97
             |||| |||||||||||||||||||||
Sbjct: 42135 cctccagctcctccacccctccccca 42110
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>ref|NM_006160.2| Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA
          Length = 2019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cacccctcccccattcccaat 105
            |||||||||||||||||||||
Sbjct: 1635 cacccctcccccattcccaat 1655
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>emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, complete sequence
          Length = 164576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     cacccctcccccattcccaat 105
              |||||||||||||||||||||
Sbjct: 132260 cacccctcccccattcccaat 132240
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>gb|BC022481.1| Homo sapiens neurogenic differentiation 2, mRNA (cDNA clone MGC:26304
            IMAGE:4816285), complete cds
          Length = 2019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cacccctcccccattcccaat 105
            |||||||||||||||||||||
Sbjct: 1635 cacccctcccccattcccaat 1655
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>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence
          Length = 157216

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    cacccctcccccattcccaat 105
             |||||||||||||||||||||
Sbjct: 35763 cacccctcccccattcccaat 35743
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>emb|CR624963.1| full-length cDNA clone CS0DF008YN08 of Fetal brain of Homo sapiens
            (human)
          Length = 1938

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cacccctcccccattcccaat 105
            |||||||||||||||||||||
Sbjct: 1586 cacccctcccccattcccaat 1606
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>emb|CR590531.1| full-length cDNA clone CS0DF027YM01 of Fetal brain of Homo sapiens
            (human)
          Length = 1950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cacccctcccccattcccaat 105
            |||||||||||||||||||||
Sbjct: 1617 cacccctcccccattcccaat 1637
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>dbj|AB021742.1| Homo sapiens NDRF mRNA for neuroD-related factor, complete cds
          Length = 6246

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cacccctcccccattcccaat 105
            |||||||||||||||||||||
Sbjct: 4613 cacccctcccccattcccaat 4633
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 419     ggctcgtcctcccgctcatcctcct 443
               ||||||||||||| |||||||||||
Sbjct: 1874483 ggctcgtcctccccctcatcctcct 1874507



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 28874151 gagaggagaagctagggttt 28874170
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>gb|AF177040.1| Synthetic construct clone pH77(p7)-J6S hepatitis C virus, complete
            genome
          Length = 9611

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7155 cctcccgctcatcctcctctg 7135
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>gb|AF177039.1| Synthetic construct clone pH77-J6S hepatitis C virus, complete genome
          Length = 9611

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7155 cctcccgctcatcctcctctg 7135
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>gb|AF177038.1| Synthetic construct clone pH77(p7)CV-J6S hepatitis C virus, complete
            genome
          Length = 9611

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7155 cctcccgctcatcctcctctg 7135
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>gb|AF177037.1| Synthetic construct clone pH77CV-J6S hepatitis C virus, complete
            genome
          Length = 9611

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7155 cctcccgctcatcctcctctg 7135
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>gb|AF290978.1|AF290978 Hepatitis C virus isolate colonel complete genome
          Length = 9365

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7131 cctcccgctcatcctcctctg 7111
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0548D03
          Length = 156709

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 419  ggctcgtcctcccgctcatcctcct 443
            ||||||||||||| |||||||||||
Sbjct: 3263 ggctcgtcctccccctcatcctcct 3287
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>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001H02
          Length = 147160

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 419   ggctcgtcctcccgctcatcctcct 443
             ||||||||||||| |||||||||||
Sbjct: 74961 ggctcgtcctccccctcatcctcct 74985
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>dbj|AK063692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F10, full
           insert sequence
          Length = 1546

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 419 ggctcgtcctcccgctcatcctcct 443
           ||||||||||||| |||||||||||
Sbjct: 403 ggctcgtcctccccctcatcctcct 379
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>gb|U58681.1|HSU58681 Homo sapiens neurogenic basic-helix-loop-helix protein (NeuroD2)
            gene, complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cacccctcccccattcccaat 105
            |||||||||||||||||||||
Sbjct: 1491 cacccctcccccattcccaat 1511
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>gb|AF011753.1|AF011753 Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds
          Length = 9599

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7143 cctcccgctcatcctcctctg 7123
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>gb|AF011752.1|AF011752 Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds
          Length = 9599

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7143 cctcccgctcatcctcctctg 7123
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>gb|AF011751.1|AF011751 Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds
          Length = 9599

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7143 cctcccgctcatcctcctctg 7123
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>gb|AF009606.1|AF009606 Hepatitis C virus polyprotein gene, complete cds
          Length = 9646

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7143 cctcccgctcatcctcctctg 7123
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>gb|M67463.1|HPCCGAA Hepatitis C virus, complete genome
          Length = 9416

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 426  cctcccgctcatcctcctctg 446
            |||||||||||||||||||||
Sbjct: 7143 cctcccgctcatcctcctctg 7123
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>gb|L24391.1|ASTDBP Arena sativa DNA binding protein (PF-1) mRNA, complete cds
          Length = 960

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 334 gagggctttggcggcggcggt 354
           |||||||||||||||||||||
Sbjct: 408 gagggctttggcggcggcggt 388
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>gb|BT020513.1| Arabidopsis thaliana At5g24520 gene, complete cds
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 550 ggagaagctagggttttcgc 569
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>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 422   tcgtcctcccgctcatcctcctct 445
             |||||||||||||| |||||||||
Sbjct: 46619 tcgtcctcccgctcttcctcctct 46642
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>ref|NM_122360.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide
           binding AT5G24520 (TTG1) transcript variant AT5G24520.3
           mRNA, complete cds
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 664 ggagaagctagggttttcgc 683
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>ref|NM_180739.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide
           binding AT5G24520 (TTG1) transcript variant AT5G24520.2
           mRNA, complete cds
          Length = 1436

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 664 ggagaagctagggttttcgc 683
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>ref|NM_180738.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide
           binding AT5G24520 (TTG1) transcript variant AT5G24520.1
           mRNA, complete cds
          Length = 1561

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 664 ggagaagctagggttttcgc 683
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>gb|BT020231.1| Arabidopsis thaliana At5g24520 gene, complete cds
          Length = 1254

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 604 ggagaagctagggttttcgc 623
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>ref|XM_473969.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1431

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 422 tcgtcctcccgctcatcctcctct 445
           |||||||||||||| |||||||||
Sbjct: 403 tcgtcctcccgctcttcctcctct 380
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>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0073C10, complete sequence
          Length = 165350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gagaggagaagctagggttt 52
            ||||||||||||||||||||
Sbjct: 3686 gagaggagaagctagggttt 3667
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   ggcgctggcgatcgagctcc 329
             ||||||||||||||||||||
Sbjct: 25791 ggcgctggcgatcgagctcc 25810
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>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence
          Length = 198590

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    gagctcctccacccctcccccatt 99
             |||||||||| |||||||||||||
Sbjct: 27333 gagctcctcctcccctcccccatt 27310
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>ref|XM_607249.2| PREDICTED: Bos taurus similar to Neurogenic differentiation factor 2
            (NeuroD2) (Brain bHLH protein KW8) (LOC528817), mRNA
          Length = 1793

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   acccctcccccattcccaat 105
            ||||||||||||||||||||
Sbjct: 1440 acccctcccccattcccaat 1459
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>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19,
              complete sequence
          Length = 141368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     gagaggagaagctagggttt 52
              ||||||||||||||||||||
Sbjct: 126729 gagaggagaagctagggttt 126710
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>gb|BT011856.1| Arabidopsis thaliana At5g24520 mRNA sequence
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 547 ggagaagctagggttttcgc 566
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>ref|XM_751925.1| Ustilago maydis 521 hypothetical protein (UM00871.1) partial mRNA
          Length = 3090

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   aagctagggttttcgccatg 60
            ||||||||||||||||||||
Sbjct: 3065 aagctagggttttcgccatg 3084
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>emb|AM055906.1| Hepatitis C virus partial NS5A gene for non structural protein 5A,
           isolate NR4
          Length = 342

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 427 ctcccgctcatcctcctctg 446
           ||||||||||||||||||||
Sbjct: 321 ctcccgctcatcctcctctg 302
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>ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09686.1)
            partial mRNA
          Length = 2094

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 388  tggtcgcggcgcgtcgccaccatg 411
            ||||||||||||| ||||||||||
Sbjct: 1992 tggtcgcggcgcgccgccaccatg 1969
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>ref|XM_760877.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
           (TP01_0443) partial mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  aatcgaaggaaattaaacaa 29
           ||||||||||||||||||||
Sbjct: 635 aatcgaaggaaattaaacaa 654
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>ref|XM_853802.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
            subfamily C, member 1, transcript variant 2 (LOC607587),
            mRNA
          Length = 1579

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 422  tcgtcctcccgctcatcctcctct 445
            ||||||||| ||||||||||||||
Sbjct: 1069 tcgtcctcctgctcatcctcctct 1046
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>ref|XM_844389.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
            subfamily C, member 1, transcript variant 1 (LOC607587),
            mRNA
          Length = 2085

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 422  tcgtcctcccgctcatcctcctct 445
            ||||||||| ||||||||||||||
Sbjct: 1575 tcgtcctcctgctcatcctcctct 1552
to top
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
             complete sequence
          Length = 166951

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 422   tcgtcctcccgctcatcctcctct 445
             |||||||||||||| |||||||||
Sbjct: 58370 tcgtcctcccgctcttcctcctct 58393
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>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
              complete sequence
          Length = 159502

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     gagaggagaagctagggttt 52
              ||||||||||||||||||||
Sbjct: 126094 gagaggagaagctagggttt 126075
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>emb|AJ586862.1| Matthiola incana partial ttg1 gene for transparenta testa glabra 1
           protein, exons 1-2, strain 17
          Length = 1981

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 340 ggagaagctagggttttcgc 359
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>emb|AJ586861.1| Matthiola incana partial ttg1 gene for transparenta testa glabra 1
           protein, exons 1-2, strain 04
          Length = 2155

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 514 ggagaagctagggttttcgc 533
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      gaaaaatcgaaggaaattaa 25
              ||||||||||||||||||||
Sbjct: 468690 gaaaaatcgaaggaaattaa 468671
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>ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobulin superfamily, member
            9 (LOC567334), mRNA
          Length = 3618

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 425  tcctcccgctcatcctcctctggg 448
            ||||||| ||||||||||||||||
Sbjct: 3329 tcctccccctcatcctcctctggg 3306
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>ref|XM_685829.1| PREDICTED: Danio rerio similar to MGC80493 protein (LOC562449),
           mRNA
          Length = 2286

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 425 tcctcccgctcatcctcctctggg 448
           ||||||| ||||||||||||||||
Sbjct: 119 tcctccccctcatcctcctctggg 96
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>dbj|AK048555.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130073J24 product:unclassifiable, full
            insert sequence
          Length = 3914

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 79   ctcctccacccctcccccattccc 102
            |||||||| |||||||||||||||
Sbjct: 2394 ctcctccatccctcccccattccc 2417
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 32356511 gagaggagaagctagggttt 32356492



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 32091148 gagaggagaagctagggttt 32091129



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 422      tcgtcctcccgctcatcctcctct 445
                |||||||||||||| |||||||||
Sbjct: 31885504 tcgtcctcccgctcttcctcctct 31885527



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 33      gagaggagaagctagggttt 52
               ||||||||||||||||||||
Sbjct: 4339930 gagaggagaagctagggttt 4339911
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 33      gagaggagaagctagggttt 52
               ||||||||||||||||||||
Sbjct: 3805799 gagaggagaagctagggttt 3805780
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 25262971 gagaggagaagctagggttt 25262990
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gagaggagaagctagggttt 52
                ||||||||||||||||||||
Sbjct: 25566120 gagaggagaagctagggttt 25566101
to top
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09,
             complete sequence
          Length = 127117

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gagaggagaagctagggttt 52
             ||||||||||||||||||||
Sbjct: 87798 gagaggagaagctagggttt 87779
to top
>emb|BX830220.1|CNS0A18T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB66ZG10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 643 ggagaagctagggttttcgc 662
to top
>emb|BX832324.1|CNS0A158 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH65ZH07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1284

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 625 ggagaagctagggttttcgc 644
to top
>emb|BX831455.1|CNS0A0UO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS92ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 635 ggagaagctagggttttcgc 654
to top
>emb|BX831165.1|CNS0A0UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZD03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1303

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 627 ggagaagctagggttttcgc 646
to top
>emb|BX830656.1|CNS0A0Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS10ZE09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1307

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 632 ggagaagctagggttttcgc 651
to top
>dbj|AB117764.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-26
          Length = 2753

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ggagaagctagggttttcgc 56
            ||||||||||||||||||||
Sbjct: 1355 ggagaagctagggttttcgc 1374
to top
>dbj|AB117763.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-25
          Length = 2752

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ggagaagctagggttttcgc 56
            ||||||||||||||||||||
Sbjct: 1356 ggagaagctagggttttcgc 1375
to top
>dbj|AB117762.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-24
          Length = 2749

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ggagaagctagggttttcgc 56
            ||||||||||||||||||||
Sbjct: 1351 ggagaagctagggttttcgc 1370
to top
>dbj|AB117761.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-23
          Length = 2753

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ggagaagctagggttttcgc 56
            ||||||||||||||||||||
Sbjct: 1355 ggagaagctagggttttcgc 1374
to top
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004A09
          Length = 158826

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gagaggagaagctagggttt 52
             ||||||||||||||||||||
Sbjct: 12926 gagaggagaagctagggttt 12907
to top
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696E01
          Length = 194056

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gagaggagaagctagggttt 52
             ||||||||||||||||||||
Sbjct: 93723 gagaggagaagctagggttt 93704
to top
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gagaggagaagctagggttt 52
             ||||||||||||||||||||
Sbjct: 24195 gagaggagaagctagggttt 24214
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>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1250G12
          Length = 144590

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gagaggagaagctagggttt 52
             ||||||||||||||||||||
Sbjct: 30122 gagaggagaagctagggttt 30141
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>emb|AL845312.3| Zebrafish DNA sequence from clone DKEY-287F10, complete sequence
          Length = 174959

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 425    tcctcccgctcatcctcctctggg 448
              ||||||| ||||||||||||||||
Sbjct: 143876 tcctccccctcatcctcctctggg 143853
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>dbj|AB010068.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18P6
          Length = 74589

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   ggagaagctagggttttcgc 56
            ||||||||||||||||||||
Sbjct: 6549 ggagaagctagggttttcgc 6530
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>ref|XM_561521.1| Anopheles gambiae str. PEST ENSANGP00000028107 (ENSANGG00000022232),
            partial mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   ccacctcgagctcctccacc 88
            ||||||||||||||||||||
Sbjct: 1397 ccacctcgagctcctccacc 1416
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>emb|AJ251523.1|ATH251523 Arabidopsis thaliana ecotype Estland ttg1 gene for transparent
           testa glabra 1, exons 1-2 hlm mutant allele
          Length = 2051

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 646 ggagaagctagggttttcgc 665
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>emb|AJ251522.1|ATH251522 Arabidopsis thaliana ecotype Estland TTG1 gene for transparent
           testa glabra 1, exons 1-2 wild type allele
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 629 ggagaagctagggttttcgc 648
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>emb|AJ133743.1|ATH133743 Arabidopsis thaliana ttg1 gene
          Length = 5777

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ggagaagctagggttttcgc 56
            ||||||||||||||||||||
Sbjct: 3930 ggagaagctagggttttcgc 3949
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>dbj|AK101027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F02, full
            insert sequence
          Length = 3504

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 422  tcgtcctcccgctcatcctcctct 445
            |||||||||||||| |||||||||
Sbjct: 2581 tcgtcctcccgctcttcctcctct 2604
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>dbj|D90360.1|MUSCYTK Mus musculus gene for cytokeratin endo A, complete cds
          Length = 10247

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   ccacccctcccccattccca 103
            ||||||||||||||||||||
Sbjct: 7372 ccacccctcccccattccca 7353
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>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167806

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gagaggagaagctagggttt 52
             ||||||||||||||||||||
Sbjct: 21578 gagaggagaagctagggttt 21597
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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
              complete sequence
          Length = 141752

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     gagaggagaagctagggttt 52
              ||||||||||||||||||||
Sbjct: 111855 gagaggagaagctagggttt 111836
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>emb|AJ875188.1| Malcolmia flexuosa subsp. naxensis partial ttg1 gene for
           transparent testa glabra protein 1
          Length = 737

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 319 ggagaagctagggttttcgc 338
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>emb|AJ875187.1| Matthiola tricuspidata partial ttg1 gene for transparent testa
           glabra 1 protein
          Length = 737

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ggagaagctagggttttcgc 56
           ||||||||||||||||||||
Sbjct: 319 ggagaagctagggttttcgc 338
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>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete
             sequence
          Length = 203434

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    ctcctccacccctcccccattccc 102
             |||||||| |||||||||||||||
Sbjct: 66540 ctcctccatccctcccccattccc 66563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,491,334
Number of Sequences: 3902068
Number of extensions: 3491334
Number of successful extensions: 72293
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71499
Number of HSP's gapped (non-prelim): 794
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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