ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_483003.1| Oryza sativa (japonica cultivar-group), mRNA 172 7e-40
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
3dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
4dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
5dbj|AK065903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
6emb|CR626926.1| Aegilops tauschii 46 0.10
7ref|NM_188963.2| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
8ref|XM_507234.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.6
9ref|NM_194659.1| Oryza sativa (japonica cultivar-group) putative... 42 1.6
10gb|AC131118.4| Mus musculus BAC clone RP24-386M5 from chromosome... 42 1.6
11emb|CR734455.2|CNS0GTHI Tetraodon nigroviridis full-length cDNA 42 1.6
12emb|CR720927.2|CNS0GJ7P Tetraodon nigroviridis full-length cDNA 42 1.6
13emb|CR671250.2|CNS0FGWO Tetraodon nigroviridis full-length cDNA 42 1.6
14gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
15gb|AC007488.15| Homo sapiens 3q27 BAC RP11-246B7 (Roswell Park C... 42 1.6
16gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
17emb|BX539345.7| Zebrafish DNA sequence from clone DKEY-120M4 in ... 42 1.6
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19gb|AC007690.12| Homo sapiens 3 BAC RP11-42D20 (Roswell Park Canc... 42 1.6
20dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AK104119.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
22dbj|AK059408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
23gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 42 1.6
24gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
25gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.3
26gb|AE009362.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 6.3
27gb|AE008251.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 6.3
28gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.3
29gb|AC125372.4| Mus musculus BAC clone RP24-505G5 from chromosome... 40 6.3
30gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.3
31emb|AL033397.7|HS27K12 Human DNA sequence from clone RP1-27K12 o... 40 6.3
32emb|AL691512.11| Mouse DNA sequence from clone RP23-440L5 on chr... 40 6.3
33gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, com... 40 6.3
34gb|AF546139.1|AF546140S2 Amycolatopsis orientalis PksE (pksE) an... 40 6.3
35dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
36emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, ... 40 6.3
37emb|CR762427.15| Zebrafish DNA sequence from clone DKEY-253I9 in... 40 6.3

>ref|XM_483003.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2730

 Score =  172 bits (87), Expect = 7e-40
 Identities = 240/291 (82%)
 Strand = Plus / Plus

                                                                       
Query: 127 gccagcacatcaaagatttgcaccctggacaaagcatatggattcagtttcgtatgcaga 186
           ||||||||||| ||||||| ||| ||||| |||| |||||||||||| || |||||||||
Sbjct: 46  gccagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcaga 105

                                                                       
Query: 187 agtgttgttgatctaaggagtaaaaaattccattcccaaatttctaagagaaagtgctac 246
           ||||| |||||||| |||||| ||||||| ||| | |   ||| |||||||||| |||| 
Sbjct: 106 agtgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctat 165

                                                                       
Query: 247 ttaacaagttcaccgtcggaatttgagaagatcattttgagtgttagatggttagaattt 306
           || |  |||||| | || |||| |||||||||||||   |||| ||||||| ||||||||
Sbjct: 166 ttcaggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaattt 225

                                                                       
Query: 307 aggagacagaggatagcctttcagagaactagaaggtgggttcgcagtattccatcggct 366
           |||||||||||| |||| ||||||||||||||||||    | |    |||||| | ||||
Sbjct: 226 aggagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggct 285

                                                              
Query: 367 tctcaagatgatggcagtggtgtgtctgttaatggagtaccacaagttgat 417
           |||||||||||| |||||||| | |||||||| |||   ||||||||||||
Sbjct: 286 tctcaagatgatagcagtggtttatctgttaacggatccccacaagttgat 336



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  168 bits (85), Expect = 1e-38
 Identities = 238/289 (82%)
 Strand = Plus / Plus

                                                                            
Query: 129      cagcacatcaaagatttgcaccctggacaaagcatatggattcagtttcgtatgcagaag 188
                ||||||||| ||||||| ||| ||||| |||| |||||||||||| || |||||||||||
Sbjct: 23827832 cagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaag 23827891

                                                                            
Query: 189      tgttgttgatctaaggagtaaaaaattccattcccaaatttctaagagaaagtgctactt 248
                ||| |||||||| |||||| ||||||| ||| | |   ||| |||||||||| |||| ||
Sbjct: 23827892 tgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctattt 23827951

                                                                            
Query: 249      aacaagttcaccgtcggaatttgagaagatcattttgagtgttagatggttagaatttag 308
                 |  |||||| | || |||| |||||||||||||   |||| ||||||| ||||||||||
Sbjct: 23827952 caggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttag 23828011

                                                                            
Query: 309      gagacagaggatagcctttcagagaactagaaggtgggttcgcagtattccatcggcttc 368
                |||||||||| |||| ||||||||||||||||||    | |    |||||| | ||||||
Sbjct: 23828012 gagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttc 23828071

                                                                 
Query: 369      tcaagatgatggcagtggtgtgtctgttaatggagtaccacaagttgat 417
                |||||||||| |||||||| | |||||||| |||   ||||||||||||
Sbjct: 23828072 tcaagatgatagcagtggtttatctgttaacggatccccacaagttgat 23828120



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       accgccgtggcgtcgcagccg 81
                |||||||||||||||||||||
Sbjct: 20452592 accgccgtggcgtcgcagccg 20452572



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>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0092C08
          Length = 131049

 Score =  168 bits (85), Expect = 1e-38
 Identities = 238/289 (82%)
 Strand = Plus / Plus

                                                                          
Query: 129    cagcacatcaaagatttgcaccctggacaaagcatatggattcagtttcgtatgcagaag 188
              ||||||||| ||||||| ||| ||||| |||| |||||||||||| || |||||||||||
Sbjct: 117032 cagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaag 117091

                                                                          
Query: 189    tgttgttgatctaaggagtaaaaaattccattcccaaatttctaagagaaagtgctactt 248
              ||| |||||||| |||||| ||||||| ||| | |   ||| |||||||||| |||| ||
Sbjct: 117092 tgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctattt 117151

                                                                          
Query: 249    aacaagttcaccgtcggaatttgagaagatcattttgagtgttagatggttagaatttag 308
               |  |||||| | || |||| |||||||||||||   |||| ||||||| ||||||||||
Sbjct: 117152 caggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttag 117211

                                                                          
Query: 309    gagacagaggatagcctttcagagaactagaaggtgggttcgcagtattccatcggcttc 368
              |||||||||| |||| ||||||||||||||||||    | |    |||||| | ||||||
Sbjct: 117212 gagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttc 117271

                                                               
Query: 369    tcaagatgatggcagtggtgtgtctgttaatggagtaccacaagttgat 417
              |||||||||| |||||||| | |||||||| |||   ||||||||||||
Sbjct: 117272 tcaagatgatagcagtggtttatctgttaacggatccccacaagttgat 117320



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>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_H02
          Length = 108603

 Score =  168 bits (85), Expect = 1e-38
 Identities = 238/289 (82%)
 Strand = Plus / Plus

                                                                         
Query: 129   cagcacatcaaagatttgcaccctggacaaagcatatggattcagtttcgtatgcagaag 188
             ||||||||| ||||||| ||| ||||| |||| |||||||||||| || |||||||||||
Sbjct: 19536 cagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaag 19595

                                                                         
Query: 189   tgttgttgatctaaggagtaaaaaattccattcccaaatttctaagagaaagtgctactt 248
             ||| |||||||| |||||| ||||||| ||| | |   ||| |||||||||| |||| ||
Sbjct: 19596 tgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctattt 19655

                                                                         
Query: 249   aacaagttcaccgtcggaatttgagaagatcattttgagtgttagatggttagaatttag 308
              |  |||||| | || |||| |||||||||||||   |||| ||||||| ||||||||||
Sbjct: 19656 caggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttag 19715

                                                                         
Query: 309   gagacagaggatagcctttcagagaactagaaggtgggttcgcagtattccatcggcttc 368
             |||||||||| |||| ||||||||||||||||||    | |    |||||| | ||||||
Sbjct: 19716 gagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttc 19775

                                                              
Query: 369   tcaagatgatggcagtggtgtgtctgttaatggagtaccacaagttgat 417
             |||||||||| |||||||| | |||||||| |||   ||||||||||||
Sbjct: 19776 tcaagatgatagcagtggtttatctgttaacggatccccacaagttgat 19824



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>dbj|AK065903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049J03, full
           insert sequence
          Length = 2736

 Score =  165 bits (83), Expect = 2e-37
 Identities = 239/291 (82%)
 Strand = Plus / Plus

                                                                       
Query: 127 gccagcacatcaaagatttgcaccctggacaaagcatatggattcagtttcgtatgcaga 186
           ||||||||||| ||||||| ||| ||||| |||| |||||||||||| || |||||||||
Sbjct: 187 gccagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcaga 246

                                                                       
Query: 187 agtgttgttgatctaaggagtaaaaaattccattcccaaatttctaagagaaagtgctac 246
           ||||| |||||||| |||||| ||||||| ||| | |   ||| |||||||||| || | 
Sbjct: 247 agtgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagccat 306

                                                                       
Query: 247 ttaacaagttcaccgtcggaatttgagaagatcattttgagtgttagatggttagaattt 306
           || |  |||||| | || |||| |||||||||||||   |||| ||||||| ||||||||
Sbjct: 307 ttcaggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaattt 366

                                                                       
Query: 307 aggagacagaggatagcctttcagagaactagaaggtgggttcgcagtattccatcggct 366
           |||||||||||| |||| ||||||||||||||||||    | |    |||||| | ||||
Sbjct: 367 aggagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggct 426

                                                              
Query: 367 tctcaagatgatggcagtggtgtgtctgttaatggagtaccacaagttgat 417
           |||||||||||| |||||||| | |||||||| |||   ||||||||||||
Sbjct: 427 tctcaagatgatagcagtggtttatctgttaacggatccccacaagttgat 477



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>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 12    cccgcgccgatctcgtcgtcggc 34
             |||||||||||||||||||||||
Sbjct: 58809 cccgcgccgatctcgtcgtcggc 58787



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>ref|NM_188963.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1145

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 61  accgccgtggcgtcgcagccg 81
           |||||||||||||||||||||
Sbjct: 133 accgccgtggcgtcgcagccg 113



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>ref|XM_507234.1| PREDICTED Oryza sativa (japonica cultivar-group), P0456B03.120 mRNA
          Length = 1152

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 61  accgccgtggcgtcgcagccg 81
           |||||||||||||||||||||
Sbjct: 136 accgccgtggcgtcgcagccg 116



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>ref|NM_194659.1| Oryza sativa (japonica cultivar-group) putative
            anthocyanidin-3-glucoside rhamnosyltransferase
            (OSJNBa0049K09.17), mRNA
          Length = 1479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 59   cgaccgccgtggcgtcgcagccgcg 83
            |||||||| ||||||||||||||||
Sbjct: 1266 cgaccgccatggcgtcgcagccgcg 1290



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>gb|AC131118.4| Mus musculus BAC clone RP24-386M5 from chromosome 19, complete sequence
          Length = 116409

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 369   tcaagatgatggcagtggtgt 389
             |||||||||||||||||||||
Sbjct: 55957 tcaagatgatggcagtggtgt 55977



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>emb|CR734455.2|CNS0GTHI Tetraodon nigroviridis full-length cDNA
          Length = 719

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  cagcaaccccgatggcgaccg 64
           |||||||||||||||||||||
Sbjct: 354 cagcaaccccgatggcgaccg 334



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>emb|CR720927.2|CNS0GJ7P Tetraodon nigroviridis full-length cDNA
          Length = 620

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  cagcaaccccgatggcgaccg 64
           |||||||||||||||||||||
Sbjct: 255 cagcaaccccgatggcgaccg 235



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>emb|CR671250.2|CNS0FGWO Tetraodon nigroviridis full-length cDNA
          Length = 731

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  cagcaaccccgatggcgaccg 64
           |||||||||||||||||||||
Sbjct: 354 cagcaaccccgatggcgaccg 334



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 59      cgaccgccgtggcgtcgcagccgcg 83
               |||||||| ||||||||||||||||
Sbjct: 1386002 cgaccgccatggcgtcgcagccgcg 1386026



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>gb|AC007488.15| Homo sapiens 3q27 BAC RP11-246B7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146443

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    gcagtcaaatgaaggaaataa 442
              |||||||||||||||||||||
Sbjct: 129509 gcagtcaaatgaaggaaataa 129529



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>gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0049K09, complete sequence
          Length = 146576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 59    cgaccgccgtggcgtcgcagccgcg 83
             |||||||| ||||||||||||||||
Sbjct: 85332 cgaccgccatggcgtcgcagccgcg 85356



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>emb|BX539345.7| Zebrafish DNA sequence from clone DKEY-120M4 in linkage group 9,
             complete sequence
          Length = 94606

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   aggaaataagggtgaaattgg 454
             |||||||||||||||||||||
Sbjct: 17969 aggaaataagggtgaaattgg 17989



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 59      cgaccgccgtggcgtcgcagccgcg 83
               |||||||| ||||||||||||||||
Sbjct: 1386002 cgaccgccatggcgtcgcagccgcg 1386026



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>gb|AC007690.12| Homo sapiens 3 BAC RP11-42D20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 422    gcagtcaaatgaaggaaataa 442
              |||||||||||||||||||||
Sbjct: 153824 gcagtcaaatgaaggaaataa 153804



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>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0456B03
          Length = 152973

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    accgccgtggcgtcgcagccg 81
             |||||||||||||||||||||
Sbjct: 83222 accgccgtggcgtcgcagccg 83202



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>dbj|AK104119.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B12, full
           insert sequence
          Length = 1145

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 61  accgccgtggcgtcgcagccg 81
           |||||||||||||||||||||
Sbjct: 133 accgccgtggcgtcgcagccg 113



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>dbj|AK059408.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C04, full
           insert sequence
          Length = 1152

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 61  accgccgtggcgtcgcagccg 81
           |||||||||||||||||||||
Sbjct: 136 accgccgtggcgtcgcagccg 116



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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 208     aaaaaattccattcccaaatttcta 232
               ||||||||| |||||||||||||||
Sbjct: 1528447 aaaaaattcaattcccaaatttcta 1528423



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 59      cgaccgccgtggcgtcgcagccgcg 83
               |||||||| ||||||||||||||||
Sbjct: 1385999 cgaccgccatggcgtcgcagccgcg 1386023



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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tggcgaccgccgtggcgtcg 75
             ||||||||||||||||||||
Sbjct: 68893 tggcgaccgccgtggcgtcg 68912



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>gb|AE009362.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 132 of
            187 of the complete sequence
          Length = 11612

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   cgatggcgaccgccgtggcg 72
            ||||||||||||||||||||
Sbjct: 2204 cgatggcgaccgccgtggcg 2223



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>gb|AE008251.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 55 of 187
             of the complete sequence
          Length = 19961

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cgatggcgaccgccgtggcg 72
             ||||||||||||||||||||
Sbjct: 14334 cgatggcgaccgccgtggcg 14315



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      ccgcgccgatctcgtcgtcg 32
               ||||||||||||||||||||
Sbjct: 3208288 ccgcgccgatctcgtcgtcg 3208307



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>gb|AC125372.4| Mus musculus BAC clone RP24-505G5 from chromosome 7, complete sequence
          Length = 131080

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    aggagacagaggatagcctt 326
              ||||||||||||||||||||
Sbjct: 102269 aggagacagaggatagcctt 102250



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      gatctcgtcgtcggcctcga 39
               ||||||||||||||||||||
Sbjct: 1541173 gatctcgtcgtcggcctcga 1541154



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>emb|AL033397.7|HS27K12 Human DNA sequence from clone RP1-27K12 on chromosome 6p11.2-12.3
              Contains the GCLC gene for glutamate-cysteine ligase
              catalytic subunit (GCS), a novel gene and one CpG island,
              complete sequence
          Length = 164027

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    tgtctgttaatggagtacca 408
              ||||||||||||||||||||
Sbjct: 139005 tgtctgttaatggagtacca 139024



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>emb|AL691512.11| Mouse DNA sequence from clone RP23-440L5 on chromosome 4 Contains a CpG
             island, complete sequence
          Length = 206422

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   tgatcccagcagtcaaatga 433
             ||||||||||||||||||||
Sbjct: 97936 tgatcccagcagtcaaatga 97917



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>gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    caaatttctaagagaaagtgctac 246
              ||||||||| ||||||||||||||
Sbjct: 162945 caaatttcttagagaaagtgctac 162922



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>gb|AF546139.1|AF546140S2 Amycolatopsis orientalis PksE (pksE) and TebC (tebC) genes, complete
            cds
          Length = 6262

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 25   cgtcgtcggcctcgaggagcagca 48
            |||||||||| |||||||||||||
Sbjct: 1489 cgtcgtcggcgtcgaggagcagca 1466



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 13      ccgcgccgatctcgtcgtcg 32
               ||||||||||||||||||||
Sbjct: 2805030 ccgcgccgatctcgtcgtcg 2805011



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>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence
          Length = 176196

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 434  aggaaataagggtgaaattggata 457
            |||||||||||||||| |||||||
Sbjct: 8643 aggaaataagggtgaatttggata 8666



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>emb|CR762427.15| Zebrafish DNA sequence from clone DKEY-253I9 in linkage group 1, complete
              sequence
          Length = 209003

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    tgatggcagtggtgtgtctg 394
              ||||||||||||||||||||
Sbjct: 167192 tgatggcagtggtgtgtctg 167173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,208,565
Number of Sequences: 3902068
Number of extensions: 4208565
Number of successful extensions: 78851
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78443
Number of HSP's gapped (non-prelim): 403
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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