ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl03g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1METX_THEFY (Q47L17) Homoserine O-acetyltransferase (EC 2.3.1.31)... 28 8.6

>METX_THEFY (Q47L17) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 379

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 87  RQGGPPGSQXXXXMESPVKEEVGGEL 164
           R+G PPG +    +  P+  E GGEL
Sbjct: 16  REGDPPGDRRWVELSEPLPLETGGEL 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.136    0.523 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,292,688
Number of Sequences: 219361
Number of extensions: 252449
Number of successful extensions: 560
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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