ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl04c02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 227 bits (579), Expect = 1e-59 Identities = 114/115 (99%), Positives = 114/115 (99%) Frame = +3 Query: 108 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISST 287 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKG TCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 288 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 452 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 115
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 194 bits (494), Expect = 7e-50 Identities = 93/114 (81%), Positives = 108/114 (94%), Gaps = 1/114 (0%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTA 290 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKG TCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 291 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 VD +NG RGKVGAEA LEQW+T SLPSLTTGES+FG+TFDW+V+KLGVPGAI+V Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIV 114
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 180 bits (457), Expect = 1e-45 Identities = 85/118 (72%), Positives = 103/118 (87%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTA 290 +LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+G TCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNTTTA 464 VD +NG RG+VG EA LEQW+TSLPSLTTGESKFG+TF+WEVEK+G+PGAI+V A Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHA 117
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 122 bits (305), Expect = 6e-28 Identities = 59/113 (52%), Positives = 82/113 (72%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTA 290 +LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 DQ+N GRG VG+EA LEQ +T LPS++ GESK + F+WE++K GVPGAI++ Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIII 112
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 115 bits (287), Expect = 7e-26 Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 111 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLIS 281 + G L D LTG ++KGTVVLM+KNVLD NDF A+ +D + EFLG T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 282 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNTT 458 S D +NG +GK+G A LE W+T++ SLT GES F +TFD+E + G PGA ++ + Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNS 118
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 107 bits (266), Expect = 2e-23 Identities = 51/114 (44%), Positives = 78/114 (68%) Frame = +3 Query: 108 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISST 287 M LGG++D + G + ++KG V+LM+KNVLD + GA+++DGI + LG+ + QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 288 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 +V+ D G GK+ A LE W+T + +T GES F +TFDW+ ++ GVPGA ++ Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFII 112
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 105 bits (262), Expect = 6e-23 Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 6/123 (4%) Frame = +3 Query: 108 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGATC 269 M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +G Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 270 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 +L+S+TA D NGGRGK+G A LE+ V ++ S GES F + F+W+ E G+PGA+VV Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 450 NTT 458 + Sbjct: 120 TNS 122
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 94.0 bits (232), Expect = 2e-19 Identities = 53/113 (46%), Positives = 71/113 (62%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTA 290 L+GGLI G + S ++KGTVV+M+KN LD D ++ D I E LG+ + QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 D NG +GK A LE ++ +L L GE+ FG+TFDW E+ GVPGA V+ Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWN-EEFGVPGAFVI 113
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 85.1 bits (209), Expect = 8e-17 Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 18/119 (15%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGATCQ 272 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ + Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 273 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 LIS+T D + G+GKVG + LE + SLP+L GES F + F+W+ E +G+PGA + Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHE-MGIPGAFYI 125
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 82.4 bits (202), Expect = 5e-16 Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = +3 Query: 141 GANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTAVDQDNGGRGK 320 G + S ++KGTVV+M KNVLD D ++ I + LG+ + QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 321 VGAEAELEQWVTSLPSLTTG-ESKFGLTFDWEVEKLGVPGAIVV 449 A LE + +L LT G E+ FG+TFDW E+ GVPGA ++ Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDWN-EEFGVPGAFII 114
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 80.9 bits (198), Expect = 2e-15 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 13/114 (11%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGATCQLISST 287 N+ ++KGTVVLMRKNVLD+N D + +D + FLG+ + QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 288 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 D G+GK+G LE ++SLP+L G+S F + F+W+ + +G+PGA + Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD-DDMGIPGAFYI 120
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 80.5 bits (197), Expect = 2e-15 Identities = 44/97 (45%), Positives = 63/97 (64%) Frame = +3 Query: 159 RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTAVDQDNGGRGKVGAEAE 338 ++KGTVVLM KN L++N G+ + D + FLG+ + QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 339 LEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 LE TSLP+L GES F + F+W+ +G+PGA + Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYI 99
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 76.6 bits (187), Expect = 3e-14 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 18/115 (15%) Frame = +3 Query: 159 RLKGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGATCQLISS 284 ++KGTVVLMRKNVLD N + +D + FLG+ QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 285 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 T + G+GKVG + LE + SLP+L GES F + F+W+ E +G+PGA + Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD-ESMGIPGAFYI 129
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 75.1 bits (183), Expect = 8e-14 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 13/126 (10%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 251 +LGGL+ ++ ++KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 252 GKGATCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGV 431 G+ + QLIS+T D + G+GK+G LE +TSLP+L G+S F + F+W+ + G+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD-DGSGI 111 Query: 432 PGAIVV 449 GA + Sbjct: 112 LGAFYI 117
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 72.4 bits (176), Expect = 5e-13 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 20/120 (16%) Frame = +3 Query: 150 KSARLKGTVVLMRKNVLDLNDFGA--------------------TIIDGIGEFLGKGATC 269 + +LKGTV+LM+KNVLD+N A +IID FLG+ Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 270 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 +LIS+T D G+GKV EA LE +TS+P+L +S F + F+W+ +G PGA + Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD-SNMGTPGAFYI 124
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 69.7 bits (169), Expect = 3e-12 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 22/123 (17%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLNDF------------------GATIIDGIGE----FLGKG 260 +K ++KGTVVLM KNVLD N G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 261 ATCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGA 440 + QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ G+PGA Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDA-SFGIPGA 122 Query: 441 IVV 449 + Sbjct: 123 FYI 125
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 66.6 bits (161), Expect = 3e-11 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 22/123 (17%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 260 N+ ++KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 261 ATCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGA 440 QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ E G+P A Sbjct: 66 IAIQLISATKT--DGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD-ENFGIPEA 122 Query: 441 IVV 449 + Sbjct: 123 FYI 125
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 66.6 bits (161), Expect = 3e-11 Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 13/113 (11%) Frame = +3 Query: 150 KSARLKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGA----------TCQLISSTA 290 K ++KGT+V+M+KNVLD+N G + G+G F+G + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 D GG+GK+G L +T LP+L GE + + F+W+ + G+PGA + Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWDSD-FGIPGAFYI 113
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 34.3 bits (77), Expect = 0.16 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVA---PLPR 248 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQ 1704 Query: 247 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 131 N S V P +L SS + T PL + PV++ Sbjct: 1705 NIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 33.5 bits (75), Expect = 0.28 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Frame = -1 Query: 469 LGAVVVLTTMAPGTPSFSTS-QSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWS 293 L V+ +P TP +TS Q+K+RPNL P T S SA PL+ Sbjct: 1137 LSGKTVIAHTSPWTPVVTTSTQTKIRPNLPIP-------STVLRKSGSATVSKPAPLNTF 1189 Query: 292 TAVELISWQVAPLPRNSPMPSMMVAPKSLRSSTF 191 +++ PLP S ++ P + S F Sbjct: 1190 LSIKSSGTSTKPLPVVKESSSDLLLPPDIISKAF 1223
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVAPLPRNSP 239 S + + R LDS V+ +V C +S + PRP ++W +++ LPR +P Sbjct: 397 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTP 452 Query: 238 MP--SMMVAP 215 + S++++P Sbjct: 453 LESGSLLISP 462
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = -1 Query: 439 APGTPSFSTSQSK-VRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 263 A + S TSQ+K + P+ P +S + + A APT P PP T + + + Sbjct: 83 AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATET 142 Query: 262 APLPRNSPMPS 230 P P+P+ Sbjct: 143 VTTPIPEPVPA 153
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 31.6 bits (70), Expect = 1.0 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -1 Query: 463 AVVVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLS 299 A + T AP P +++P + +PVV+ ++ SSS+SAP P PP S Sbjct: 537 AAAIETPAAPPRPV-----CEIKPYVVNPVVATAAAASNSSSSSSAPLPPPPPPS 586
>ZN318_HUMAN (Q5VUA4) Zinc finger protein 318 (Endocrine regulatory protein)| Length = 2099 Score = 31.2 bits (69), Expect = 1.4 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Frame = -1 Query: 469 LGAVVVLTTMAPGTPSFSTS-QSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWS 293 L V+ +P P +TS Q+K+RPNL P L CS++ S P PL+ Sbjct: 1144 LSGKTVVAHTSPWMPVVTTSTQTKIRPNLPIPSTV---LRKSCSATMSKPA----PLNTF 1196 Query: 292 TAVELISWQVAPLPRNSPMPSMMVAPKSLRSSTF 191 +++ PLP + ++ P + S F Sbjct: 1197 LSIKSSGTTAKPLPVVKESSADLLLPPDIISKAF 1230
>COBM_PSEDE (P21922) Precorrin-4 C(11)-methyltransferase (EC 2.1.1.133)| (Precorrin-3 methylase) Length = 253 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 445 TMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSAS 329 TM PG PSF+ + S + L P V+ ++T S AS Sbjct: 105 TMTPGVPSFAAAASALGRELTIPAVAQSLVLTRVSGRAS 143
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 132 TLTGANKSARLKGTVVLMRKNVLDLNDFGATI 227 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.8 bits (68), Expect = 1.8 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 427 PSFSTSQSKVRPN-LDSPVVSDGRLVTHCSSSASAPTFPRPPLSWS-TAVELISWQVAPL 254 PS + + S PN L +P +G + +A T P PPLS + ++V ++S PL Sbjct: 933 PSRAKAVSVAPPNILSTPTPLNG------IPANAASTMPPPPLSRAPSSVSMVS--PPPL 984 Query: 253 PRNSPMPSMMVAPKSLRSS 197 +NS +PS++ +S R+S Sbjct: 985 HKNSRVPSLVATSESPRAS 1003
>AMPR_PSEAE (P24734) HTH-type transcriptional activator ampR| Length = 296 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -3 Query: 443 DGARHPELLHLPVEGEAELG--LPRRQRRQARHPLLQLRLRAH 321 +G + ++L + G +G LPR + QARHP + LRL H Sbjct: 88 EGGHYRDVLTVGAVGTFTVGWLLPRLEDFQARHPFIDLRLSTH 130
>STE7_SCHPO (Q10136) Protein ste7| Length = 569 Score = 30.8 bits (68), Expect = 1.8 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%) Frame = -1 Query: 454 VLTTMAPGTPSFSTSQSKVRPNLDSPVV--------SDGRLVTHCSSSASAPTFPRPPLS 299 + T+ A T FSTS S ++ +PV+ + SSS+ AP PR S Sbjct: 197 ITTSSATHTSQFSTSSSSSVNSVHTPVMVPNPYFQYNSSMTAPSSSSSSVAPFVPRRQFS 256 Query: 298 WSTAVELISWQVAPLPRNSPMPSMMVA 218 S+A + ++ P P PS A Sbjct: 257 VSSASDPPQTPISMSPPIPPTPSQFSA 283
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 30.8 bits (68), Expect = 1.8 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 3/99 (3%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVA---PLPR 248 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1648 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQ 1707 Query: 247 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 131 N S V P SS + T PL + PV++ Sbjct: 1708 NIKFSSAPVTPNVPSSSPAPNIQTGRPLVLSSRATPVQL 1746
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = -1 Query: 460 VVVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVT-HCSSSASAPTFPRPPLSWSTAV 284 +V T+APGTP +S++ + G T HCS++ + P P + WS Sbjct: 2522 IVDTGTVAPGTPQVQVEESEL-------TLEAGHTATLHCSATGNPP----PTIHWSKLR 2570 Query: 283 ELISWQ 266 + WQ Sbjct: 2571 APLPWQ 2576
>SYS_NEIMA (Q9JT77) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 431 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = +3 Query: 129 DTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTAVDQDNG 308 D L KS ++K + +N + GA + G G+ ++ D + Sbjct: 31 DALEERRKSVQVKTEELQASRNSIS-KQIGA--LKGQGKHEEAQVAMDQVAQIKTDLEQA 87 Query: 309 GRGKVGAEAELEQWVTSLPSLTTGESKFGL--TFDWEVEKLGVP 434 + EL+ W+ S+P+L + FG T + EV K+G P Sbjct: 88 AADLDAVQKELDAWLLSIPNLPHEDVPFGKDETENVEVRKVGTP 131
>SYS_NEIMB (Q9JY95) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 431 Score = 29.6 bits (65), Expect = 4.0 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = +3 Query: 129 DTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTAVDQDNG 308 DTL KS ++K + +N + GA + G G+ A ++ D + Sbjct: 31 DTLEERRKSVQVKTEELQASRNSIS-KQIGA--LKGQGKHEEAQAAMNQVAQIKTDLEQA 87 Query: 309 GRGKVGAEAELEQWVTSLPSLTTGESKFGL--TFDWEVEKLGVP 434 + EL+ W+ S+P+L G T + EV K+G P Sbjct: 88 AADLDAVQKELDAWLLSIPNLPHESVPAGKDETENVEVRKVGTP 131
>ELF1_MOUSE (Q60775) ETS-related transcription factor Elf-1 (E74-like factor 1)| Length = 612 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = -1 Query: 457 VVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTF--PRPPLSWSTAV 284 V+L + PG+PS S ++V+ L S V S + S ASAP+F P +++S + Sbjct: 480 VMLQSQKPGSPSIVLSPTQVQQVLTSNVQS---ICNGAGSVASAPSFSATTPVVTFSRSS 536 Query: 283 ELIS 272 +L++ Sbjct: 537 QLVA 540
>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)| (Amplified in breast cancer-1 protein homolog) (AIB-1) (Fragment) Length = 1082 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/87 (24%), Positives = 38/87 (43%) Frame = -1 Query: 457 VVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 ++++ G+P ++ Q + SP+ S G +H SS+S +S L Sbjct: 180 IMISPRNRGSPKMASHQFSPAAGVHSPMGSSGNTGSHSFSSSSLSAL--QAISEGVGTSL 237 Query: 277 ISWQVAPLPRNSPMPSMMVAPKSLRSS 197 +S +P P+ P+M + S SS Sbjct: 238 LSTLSSPGPKLDNSPNMNINQPSKASS 264
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 29.6 bits (65), Expect = 4.0 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 18/121 (14%) Frame = -1 Query: 463 AVVVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAV 284 A + T + PS + + + P L S + + +SS+S T P+ STA Sbjct: 4625 ATTITATGSTTNPSSTPGTTPIPPVLTSMATTPAATSSKATSSSSPRTATTLPVLTSTAT 4684 Query: 283 ELISWQVAPLPRN-------------SPMPSMMV-----APKSLRSSTFLRMSTTVPLSR 158 + + P+P + +PM +M P++ +ST L +TT ++R Sbjct: 4685 KSTATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVL--TTTATMTR 4742 Query: 157 A 155 A Sbjct: 4743 A 4743 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/74 (25%), Positives = 33/74 (44%) Frame = -1 Query: 463 AVVVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAV 284 A +T + TPS + + L SP + + +SS+S T P+ STA Sbjct: 4199 ATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTAT 4258 Query: 283 ELISWQVAPLPRNS 242 + + V P+P ++ Sbjct: 4259 KSTATSVTPIPSST 4272
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 29.6 bits (65), Expect = 4.0 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Frame = -1 Query: 460 VVVLTTMAPGTPSFSTSQSKVRP---NLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWST 290 V + +M PG T S++ P N+ P + S P P P Sbjct: 1975 VNINNSMPPGRTGMGTPGSQMAPVSLNVPRP------------NQVSGPVMPSMPPG--- 2019 Query: 289 AVELISWQVAPLPRNSPMPSM 227 WQ APLP+ PMP + Sbjct: 2020 -----QWQQAPLPQQQPMPGL 2035
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -1 Query: 406 SKVRPNL-----DSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVAPLPRNS 242 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 241 PMP--SMMVAPKSL 206 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>SYA_PORGI (Q7MV54) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 17/94 (18%) Frame = +3 Query: 162 LKGTVVLMRKNVLDLNDFGATIIDGIGEF-------LGKGATCQLISSTAVDQDNGG--- 311 L+ + L+ K + D G+T++DG+ F T ++S + D G Sbjct: 375 LETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDT 434 Query: 312 -------RGKVGAEAELEQWVTSLPSLTTGESKF 392 R + A E WV L GESKF Sbjct: 435 EMQKQKERARNAAAVEAGDWVV----LREGESKF 464
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 28.9 bits (63), Expect = 6.8 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Frame = -1 Query: 436 PGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWST--AVELISWQV 263 P TPS Q PN P V+ ASAP+ P PP S A+ I+ Sbjct: 172 PPTPSQQHQQQHHHPN---PFVA-----------ASAPSLPPPPSSLQAPPAITPIAGLS 217 Query: 262 APLPRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAP 140 AP P + +P ++ + +S + S+ P + L AP Sbjct: 218 APAPASGSLP---LSAGGIGNSITVSSSSQPPARASQLHAP 255
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 71 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 196 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 71 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 196 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVAPLPRNSP 239 S + + R LDS V+ +V C +S + PRP ++W +++ LPR + Sbjct: 403 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTL 458 Query: 238 MP--SMMVAP 215 + S++++P Sbjct: 459 LESGSLLISP 468
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -1 Query: 349 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVAPLPRNSPMPSMM----VAPKSLR 203 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 202 SSTFLR 185 TFLR Sbjct: 63 PETFLR 68
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -1 Query: 427 PSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVE--LISWQVAPL 254 PS STS + L + ++ T + + P+ S S + +++W ++ L Sbjct: 1891 PSLSTSLRAITSTLADVKHTFEKMTTSVTPGTTLPSILSGATSGSVISKSPILTWLLSSL 1950 Query: 253 PRNSPMPSMMVAPKSLRSST 194 P SP ++ AP + SST Sbjct: 1951 PSGSPPATVSNAPHVMTSST 1970
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +3 Query: 183 MRKNVLDLNDFGATIIDGIGEFLGKGATCQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 362 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 363 PSL 371 L Sbjct: 147 EKL 149
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.5 bits (62), Expect = 8.9 Identities = 26/90 (28%), Positives = 36/90 (40%) Frame = -1 Query: 430 TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVAPLP 251 TPS ST++S P S S VT ++ +S+ P P S++ S P P Sbjct: 670 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP----SSSTTESSSAPVPTP 725 Query: 250 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 161 +S S + SST S V S Sbjct: 726 SSSTTESSSAPVPTPSSSTTESSSAPVTSS 755
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +2 Query: 71 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 184 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153
>NCOA3_HUMAN (Q9Y6Q9) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)| (Thyroid hormone receptor activator molecule 1) (TRAM-1) (ACTR) (Receptor-associated coactivator 3) (RAC-3) (Amplified in breast cancer-1 protein) (AIB-1) (Steroid receptor coacti Length = 1424 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/83 (22%), Positives = 35/83 (42%) Frame = -1 Query: 457 VVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 ++++ G+P ++ Q + SP+ S G H SS+S +S L Sbjct: 480 IMISPRNRGSPKIASHQFSPVAGVHSPMASSGNTGNHSFSSSSLSAL--QAISEGVGTSL 537 Query: 277 ISWQVAPLPRNSPMPSMMVAPKS 209 +S +P P+ P+M + S Sbjct: 538 LSTLSSPGPKLDNSPNMNITQPS 560
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 28.5 bits (62), Expect = 8.9 Identities = 25/84 (29%), Positives = 35/84 (41%) Frame = -1 Query: 439 APGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVA 260 AP T++ V+PN PV + T TF RPP++ ST + V Sbjct: 404 APPEDEPITAKEAVKPN--QPV----EVQTPLPKQELPETFQRPPIASSTPMPRAEPSVI 457 Query: 259 PLPRNSPMPSMMVAPKSLRSSTFL 188 P RN P+ L++S FL Sbjct: 458 PAARNEPI--------GLKASDFL 473 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,983,244 Number of Sequences: 219361 Number of extensions: 978921 Number of successful extensions: 4232 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4189 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
