ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476650.1| Oryza sativa (japonica cultivar-group), mRNA 307 2e-80
2dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 186 4e-44
4dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D... 186 4e-44
5dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
7gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 82 2e-12
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
9ref|NM_101582.2| Arabidopsis thaliana unknown protein AT1G17210 ... 44 0.38
10gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 geno... 44 0.38
11gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e ... 44 0.38
12gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se... 44 0.38
13ref|XM_466106.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
14gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.5
15gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complet... 42 1.5
16emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.5
17gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.5
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
29emb|AL731746.5|CNS08C7V Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
30emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
31gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 6.0
32ref|XM_508471.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 6.0
33ref|XM_513708.1| PREDICTED: Pan troglodytes similar to ubiquitin... 40 6.0
34gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.0
35emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.0
36ref|XM_843241.1| PREDICTED: Canis familiaris similar to Ubiquiti... 40 6.0
37ref|XM_850743.1| PREDICTED: Canis familiaris similar to Ubiquiti... 40 6.0
38gb|BC077719.1| Homo sapiens von Willebrand factor C and EGF doma... 40 6.0
39gb|BC052564.1| Homo sapiens von Willebrand factor C and EGF doma... 40 6.0
40gb|BC042143.1| Homo sapiens von Willebrand factor C and EGF doma... 40 6.0
41emb|AL162741.44| Human DNA sequence from clone RP5-902P8 on chro... 40 6.0
42gb|BC094777.1| Homo sapiens ubiquitin-conjugating enzyme E2, J2 ... 40 6.0
43gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene clust... 40 6.0
44gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, com... 40 6.0
45emb|CR610022.1| full-length cDNA clone CS0DL007YN17 of B cells (... 40 6.0
46emb|CR607169.1| full-length cDNA clone CS0DI075YC19 of Placenta ... 40 6.0
47emb|CR605285.1| full-length cDNA clone CS0DK007YN09 of HeLa cell... 40 6.0
48emb|CR601173.1| full-length cDNA clone CS0DI039YM16 of Placenta ... 40 6.0
49dbj|AK075017.1| Homo sapiens cDNA FLJ90536 fis, clone OVARC10001... 40 6.0
50dbj|AK056571.1| Homo sapiens cDNA FLJ32009 fis, clone NT2RP70094... 40 6.0
51gb|AE012049.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.0
52emb|CR592102.1| full-length cDNA clone CS0DA010YP10 of Neuroblas... 40 6.0
53emb|CR590185.1| full-length cDNA clone CS0DD002YM02 of Neuroblas... 40 6.0
54gb|AF499022.1| Baboon herpesvirus 2 strain OU1-76 terminase gene... 40 6.0
55gb|AF499021.1| Cercopithecine herpesvirus 2 strain B264 terminas... 40 6.0
56gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, com... 40 6.0
57gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.0
58gb|DQ059320.1| Zea mays RFLP core bin marker probe p-umc124 (CBM... 40 6.0
59ref|NM_152718.1| Homo sapiens von Willebrand factor C and EGF do... 40 6.0
60gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.0
61gb|AY205235.1| Homo sapiens URG11 mRNA, complete cds 40 6.0
62dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.0
63ref|NM_194458.1| Homo sapiens ubiquitin-conjugating enzyme E2, J... 40 6.0
64ref|NM_194457.1| Homo sapiens ubiquitin-conjugating enzyme E2, J... 40 6.0
65ref|NM_194315.1| Homo sapiens ubiquitin-conjugating enzyme E2, J... 40 6.0
66ref|NM_058167.2| Homo sapiens ubiquitin-conjugating enzyme E2, J... 40 6.0
67gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.0
68gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the ... 40 6.0
69gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 6.0
70emb|AL096805.1|CNS00YVB Homo sapiens genomic region containing h... 40 6.0
71dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.0 
>ref|XM_476650.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3250

 Score =  307 bits (155), Expect = 2e-80
 Identities = 305/355 (85%)
 Strand = Plus / Plus

                                                                       
Query: 91  ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgccgcgct 150
           |||||||| | ||||||||  |||||||||||||||||||  | ||||||||||||||||
Sbjct: 67  ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 126

                                                                       
Query: 151 cagactcgccgcccgccaccccggtcgccagttctgccggtgcttcatctcctcccgcgc 210
           | | |||||||||||||||||| ||||||||||| || ||||| ||||| || || || |
Sbjct: 127 cggcctcgccgcccgccacccccgtcgccagttcggctggtgcatcatcaccacctgcac 186

                                                                       
Query: 211 aaacgaatgtagctaccatagattggttaggcagtgggcagttatctaaagttgggccat 270
           |||| |||| ||||| |||||||||||||||  ||| ||   |||| ||||| |   |||
Sbjct: 187 aaacaaatgcagctagcatagattggttaggtggtgagccaatatccaaagtggaatcat 246

                                                                       
Query: 271 cgtcccatgttgcttcacatgctgctcaaccttctcttagtactaatgctgttggagctg 330
           | |||||  ||||| |||||||| |||  |||||||||||||||||||||| ||||||||
Sbjct: 247 catcccagattgctccacatgctcctcggccttctcttagtactaatgctgctggagctg 306

                                                                       
Query: 331 ctatggatttctcacaaccatcatgtagaccatgggaacgaggagatttacttcatcgac 390
           |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||  ||||
Sbjct: 307 ccgtggatttctctcaaccatcttgtagaccatgggaacgaggagacttgcttcggcgac 366

                                                                  
Query: 391 tggccacatttaagccttcaacatgggcttctaaaccaaaggctgctagttcact 445
           |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 367 tggccacattcaagtcttcaacatgggcttctaagccaaaggctgctagttcact 421
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>dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M17, full
           insert sequence
          Length = 3250

 Score =  307 bits (155), Expect = 2e-80
 Identities = 305/355 (85%)
 Strand = Plus / Plus

                                                                       
Query: 91  ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgccgcgct 150
           |||||||| | ||||||||  |||||||||||||||||||  | ||||||||||||||||
Sbjct: 67  ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 126

                                                                       
Query: 151 cagactcgccgcccgccaccccggtcgccagttctgccggtgcttcatctcctcccgcgc 210
           | | |||||||||||||||||| ||||||||||| || ||||| ||||| || || || |
Sbjct: 127 cggcctcgccgcccgccacccccgtcgccagttcggctggtgcatcatcaccacctgcac 186

                                                                       
Query: 211 aaacgaatgtagctaccatagattggttaggcagtgggcagttatctaaagttgggccat 270
           |||| |||| ||||| |||||||||||||||  ||| ||   |||| ||||| |   |||
Sbjct: 187 aaacaaatgcagctagcatagattggttaggtggtgagccaatatccaaagtggaatcat 246

                                                                       
Query: 271 cgtcccatgttgcttcacatgctgctcaaccttctcttagtactaatgctgttggagctg 330
           | |||||  ||||| |||||||| |||  |||||||||||||||||||||| ||||||||
Sbjct: 247 catcccagattgctccacatgctcctcggccttctcttagtactaatgctgctggagctg 306

                                                                       
Query: 331 ctatggatttctcacaaccatcatgtagaccatgggaacgaggagatttacttcatcgac 390
           |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||  ||||
Sbjct: 307 ccgtggatttctctcaaccatcttgtagaccatgggaacgaggagacttgcttcggcgac 366

                                                                  
Query: 391 tggccacatttaagccttcaacatgggcttctaaaccaaaggctgctagttcact 445
           |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 367 tggccacattcaagtcttcaacatgggcttctaagccaaaggctgctagttcact 421
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  186 bits (94), Expect = 4e-44
 Identities = 214/254 (84%)
 Strand = Plus / Minus

                                                                           
Query: 179     cagttctgccggtgcttcatctcctcccgcgcaaacgaatgtagctaccatagattggtt 238
               |||||| || ||||| ||||| || || || ||||| |||| ||||| ||||||||||||
Sbjct: 2671602 cagttcggctggtgcatcatcaccacctgcacaaacaaatgcagctagcatagattggtt 2671543

                                                                           
Query: 239     aggcagtgggcagttatctaaagttgggccatcgtcccatgttgcttcacatgctgctca 298
               |||  ||| ||   |||| ||||| |   |||| |||||  ||||| |||||||| ||| 
Sbjct: 2671542 aggtggtgagccaatatccaaagtggaatcatcatcccagattgctccacatgctcctcg 2671483

                                                                           
Query: 299     accttctcttagtactaatgctgttggagctgctatggatttctcacaaccatcatgtag 358
                |||||||||||||||||||||| |||||||||  |||||||||| |||||||| |||||
Sbjct: 2671482 gccttctcttagtactaatgctgctggagctgccgtggatttctctcaaccatcttgtag 2671423

                                                                           
Query: 359     accatgggaacgaggagatttacttcatcgactggccacatttaagccttcaacatgggc 418
               |||||||||||||||||| || ||||  |||||||||||||| ||| |||||||||||||
Sbjct: 2671422 accatgggaacgaggagacttgcttcggcgactggccacattcaagtcttcaacatgggc 2671363

                             
Query: 419     ttctaaaccaaagg 432
               |||||| |||||||
Sbjct: 2671362 ttctaagccaaagg 2671349



 Score =  101 bits (51), Expect = 2e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                           
Query: 91      ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgccgcgct 150
               |||||||| | ||||||||  |||||||||||||||||||  | ||||||||||||||||
Sbjct: 2672576 ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 2672517

                                              
Query: 151     cagactcgccgcccgccaccccggtcgccag 181
               | | |||||||||||||||||| ||||||||
Sbjct: 2672516 cggcctcgccgcccgccacccccgtcgccag 2672486
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>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1027_G06
          Length = 121885

 Score =  186 bits (94), Expect = 4e-44
 Identities = 214/254 (84%)
 Strand = Plus / Minus

                                                                         
Query: 179   cagttctgccggtgcttcatctcctcccgcgcaaacgaatgtagctaccatagattggtt 238
             |||||| || ||||| ||||| || || || ||||| |||| ||||| ||||||||||||
Sbjct: 97320 cagttcggctggtgcatcatcaccacctgcacaaacaaatgcagctagcatagattggtt 97261

                                                                         
Query: 239   aggcagtgggcagttatctaaagttgggccatcgtcccatgttgcttcacatgctgctca 298
             |||  ||| ||   |||| ||||| |   |||| |||||  ||||| |||||||| ||| 
Sbjct: 97260 aggtggtgagccaatatccaaagtggaatcatcatcccagattgctccacatgctcctcg 97201

                                                                         
Query: 299   accttctcttagtactaatgctgttggagctgctatggatttctcacaaccatcatgtag 358
              |||||||||||||||||||||| |||||||||  |||||||||| |||||||| |||||
Sbjct: 97200 gccttctcttagtactaatgctgctggagctgccgtggatttctctcaaccatcttgtag 97141

                                                                         
Query: 359   accatgggaacgaggagatttacttcatcgactggccacatttaagccttcaacatgggc 418
             |||||||||||||||||| || ||||  |||||||||||||| ||| |||||||||||||
Sbjct: 97140 accatgggaacgaggagacttgcttcggcgactggccacattcaagtcttcaacatgggc 97081

                           
Query: 419   ttctaaaccaaagg 432
             |||||| |||||||
Sbjct: 97080 ttctaagccaaagg 97067



 Score =  101 bits (51), Expect = 2e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                         
Query: 91    ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgccgcgct 150
             |||||||| | ||||||||  |||||||||||||||||||  | ||||||||||||||||
Sbjct: 98294 ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 98235

                                            
Query: 151   cagactcgccgcccgccaccccggtcgccag 181
             | | |||||||||||||||||| ||||||||
Sbjct: 98234 cggcctcgccgcccgccacccccgtcgccag 98204
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>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full
           insert sequence
          Length = 3325

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 351 tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 410
           |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 314 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 373

                                           
Query: 411 acatgggcttctaaaccaaaggctgctagttc 442
           || ||||||||||  || ||||||||||||||
Sbjct: 374 acttgggcttctaggcctaaggctgctagttc 405
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 351      tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 410
                |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 32294054 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 32293995

                             
Query: 411      acatgggcttcta 423
                || ||||||||||
Sbjct: 32293994 acttgggcttcta 32293982
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 351   tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 410
             |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 27821 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 27762

                          
Query: 411   acatgggcttcta 423
             || ||||||||||
Sbjct: 27761 acttgggcttcta 27749
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 351      tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 410
                |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 32384564 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 32384505

                             
Query: 411      acatgggcttcta 423
                || ||||||||||
Sbjct: 32384504 acttgggcttcta 32384492
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>ref|NM_101582.2| Arabidopsis thaliana unknown protein AT1G17210 mRNA, complete cds
          Length = 3348

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 354 tgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttcaa 411
           |||||| |||||||  |||||||||||||||  || || ||||| || ||||||||||
Sbjct: 340 tgtagaacatgggatagaggagatttacttcgacgtcttgccactttcaagccttcaa 397
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>gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 genomic sequence, complete
             sequence
          Length = 114935

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354   tgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttcaa 411
             |||||| |||||||  |||||||||||||||  || || ||||| || ||||||||||
Sbjct: 39231 tgtagaacatgggatagaggagatttacttcgacgtcttgccactttcaagccttcaa 39288
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>gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e In DGCR Region,
             complete sequence
          Length = 44426

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 45    cacctcacctggctctggctgg 66
             ||||||||||||||||||||||
Sbjct: 23380 cacctcacctggctctggctgg 23401
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>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
          Length = 230278

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                                
Query: 126    gcgcccgcggac-ccgccgccgcgctcagactcg 158
              |||||||||||| || ||||||||||||||||||
Sbjct: 128600 gcgcccgcggacgcctccgccgcgctcagactcg 128567
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>ref|XM_466106.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 930

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 131 cgcggacccgccgccgcgctc 151
           |||||||||||||||||||||
Sbjct: 714 cgcggacccgccgccgcgctc 734
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 71      cgcatcgaggccgagcgcgcccgcc 95
               ||||||||| |||||||||||||||
Sbjct: 2952801 cgcatcgagcccgagcgcgcccgcc 2952777
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>gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complete sequence
          Length = 177206

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    tgagagaggaggtcaggagct 117
             |||||||||||||||||||||
Sbjct: 52952 tgagagaggaggtcaggagct 52932
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 71      cgcatcgaggccgagcgcgcccgcc 95
               ||||||||| |||||||||||||||
Sbjct: 1131404 cgcatcgagcccgagcgcgcccgcc 1131380
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 71     cgcatcgaggccgagcgcgcccgcc 95
              ||||||||| |||||||||||||||
Sbjct: 725999 cgcatcgagcccgagcgcgcccgcc 725975
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 19022638 cgcggacccgccgccgcgctc 19022658



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 19022366 cgcggacccgccgccgcgctc 19022386
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 11141692 cgcggacccgccgccgcgctc 11141712
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 20387187 cgcggacccgccgccgcgctc 20387167



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 131     cgcggacccgccgccgcgctc 151
               |||||||||||||||||||||
Sbjct: 2780688 cgcggacccgccgccgcgctc 2780708



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 131     cgcggacccgccgccgcgctc 151
               |||||||||||||||||||||
Sbjct: 2780591 cgcggacccgccgccgcgctc 2780611
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 24550687 cgcggacccgccgccgcgctc 24550667
to top
>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0042E12
          Length = 164688

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 16514 cgcggacccgccgccgcgctc 16534
to top
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0686E09
          Length = 156425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    cgcggacccgccgccgcgctc 151
              |||||||||||||||||||||
Sbjct: 131071 cgcggacccgccgccgcgctc 131051
to top
>dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1217_C01
          Length = 100180

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 71598 cgcggacccgccgccgcgctc 71618
to top
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 48916 cgcggacccgccgccgcgctc 48936



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 48819 cgcggacccgccgccgcgctc 48839
to top
>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0006J22
          Length = 145271

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    cgcggacccgccgccgcgctc 151
              |||||||||||||||||||||
Sbjct: 137992 cgcggacccgccgccgcgctc 137972
to top
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0069D13
          Length = 157088

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 29611 cgcggacccgccgccgcgctc 29591
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 18948865 cgcggacccgccgccgcgctc 18948885



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 131      cgcggacccgccgccgcgctc 151
                |||||||||||||||||||||
Sbjct: 18948593 cgcggacccgccgccgcgctc 18948613
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>emb|AL731746.5|CNS08C7V Oryza sativa chromosome 12, . BAC OSJNBa0039K19 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104289

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 26169 cgcggacccgccgccgcgctc 26189



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   cgcggacccgccgccgcgctc 151
             |||||||||||||||||||||
Sbjct: 25897 cgcggacccgccgccgcgctc 25917
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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    cgcggacccgccgccgcgctc 151
              |||||||||||||||||||||
Sbjct: 118730 cgcggacccgccgccgcgctc 118750



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    cgcggacccgccgccgcgctc 151
              |||||||||||||||||||||
Sbjct: 118458 cgcggacccgccgccgcgctc 118478
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aggagctcgtcggcggcgcc 130
             ||||||||||||||||||||
Sbjct: 33502 aggagctcgtcggcggcgcc 33483
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>ref|XM_508471.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ32009
            (LOC451233), mRNA
          Length = 3439

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 3072 gccggtgcttcatctcctcc 3091
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>ref|XM_513708.1| PREDICTED: Pan troglodytes similar to ubiquitin conjugating enzyme
           E2, J2 isoform 2; yeast UBC6 homolog; ubiquitin
           conjugating enzyme 6 (LOC457188), mRNA
          Length = 1186

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 419 ccgccgccgcgctcaggctcgccg 396
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     cgcccgcggacccgccgccg 146
               ||||||||||||||||||||
Sbjct: 1647075 cgcccgcggacccgccgccg 1647094
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 155     ctcgccgcccgccaccccggtcgc 178
               |||||||| |||||||||||||||
Sbjct: 4700670 ctcgccgcacgccaccccggtcgc 4700693
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>ref|XM_843241.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme
           E2 J2 (Non-canonical ubiquitin conjugating enzyme 2)
           (NCUBE2), transcript variant 1 (LOC606935), mRNA
          Length = 1267

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 98  ccgccgccgcgctcaggctcgccg 75
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>ref|XM_850743.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme
           E2 J2 (Non-canonical ubiquitin conjugating enzyme 2)
           (NCUBE2), transcript variant 2 (LOC606935), mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 79  ccgccgccgcgctcaggctcgccg 56
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>gb|BC077719.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:6305035), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
to top
>gb|BC052564.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:6305411), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
to top
>gb|BC042143.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:5930956), partial cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
to top
>emb|AL162741.44| Human DNA sequence from clone RP5-902P8 on chromosome 1 Contains the 3'
             end of a novel gene, the TNFRSF18 gene for tumor necrosis
             factor receptor superfamily member 18, the TNFRSF4 gene
             for tumor necrosis factor receptor superfamily member 4,
             the gene for calcium binding protein Cab45 precursor
             (Cab45), the B3GALT6 gene for UDP-Gal:betaGal beta
             1,3-galactosyltransferase polypeptide 6, a novel gene, the
             UBE2J2 gene for ubiquitin-conjugating enzyme E2 J2 (UBC6
             homolog, yeast), the SCNN1D gene for sodium channel
             nonvoltage-gated 1 delta, the 3' end of the CENTB5 gene
             for centaurin beta 5 and four CpG islands, complete
             sequence
          Length = 112159

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 138   ccgccgccgcgctcagactcgccg 161
             |||||||||||||||| |||||||
Sbjct: 83801 ccgccgccgcgctcaggctcgccg 83824
to top
>gb|BC094777.1| Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog,
           yeast), transcript variant 2, mRNA (cDNA clone
           MGC:104681 IMAGE:30340049), complete cds
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 165 ccgccgccgcgctcaggctcgccg 142
to top
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence
          Length = 31310

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   cggcgcccgcggacccgccg 143
             ||||||||||||||||||||
Sbjct: 26728 cggcgcccgcggacccgccg 26747
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>gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, complete sequence
          Length = 121721

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   cacctcacctggctctggct 64
            ||||||||||||||||||||
Sbjct: 7566 cacctcacctggctctggct 7547
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>emb|CR610022.1| full-length cDNA clone CS0DL007YN17 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1230

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 148 ccgccgccgcgctcaggctcgccg 125
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>emb|CR607169.1| full-length cDNA clone CS0DI075YC19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1363

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 120 ccgccgccgcgctcaggctcgccg 97
to top
>emb|CR605285.1| full-length cDNA clone CS0DK007YN09 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1378

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 176 ccgccgccgcgctcaggctcgccg 153
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>emb|CR601173.1| full-length cDNA clone CS0DI039YM16 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1214

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 157 ccgccgccgcgctcaggctcgccg 134
to top
>dbj|AK075017.1| Homo sapiens cDNA FLJ90536 fis, clone OVARC1000105, highly similar
           to Ubiquitin conjugating enzyme E2
          Length = 1747

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 145 ccgccgccgcgctcaggctcgccg 122
to top
>dbj|AK056571.1| Homo sapiens cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar to
            FIBULIN-1, ISOFORM A PRECURSOR
          Length = 3292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2416 gccggtgcttcatctcctcc 2435
to top
>gb|AE012049.1| Xanthomonas axonopodis pv. citri str. 306,  section 427 of 469 of the
            complete genome
          Length = 10499

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 155  ctcgccgcccgccaccccggtcgc 178
            |||||||| |||||||||||||||
Sbjct: 8052 ctcgccgcacgccaccccggtcgc 8075
to top
>emb|CR592102.1| full-length cDNA clone CS0DA010YP10 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 133 ccgccgccgcgctcaggctcgccg 110
to top
>emb|CR590185.1| full-length cDNA clone CS0DD002YM02 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1277

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 176 ccgccgccgcgctcaggctcgccg 153
to top
>gb|AF499022.1| Baboon herpesvirus 2 strain OU1-76 terminase gene, partial cds
          Length = 363

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 aggagctcgtcggcggcgcc 130
           ||||||||||||||||||||
Sbjct: 65  aggagctcgtcggcggcgcc 46
to top
>gb|AF499021.1| Cercopithecine herpesvirus 2 strain B264 terminase gene, partial
           cds
          Length = 363

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 aggagctcgtcggcggcgcc 130
           ||||||||||||||||||||
Sbjct: 65  aggagctcgtcggcggcgcc 46
to top
>gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, complete sequence
          Length = 187204

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cacctcacctggctctggct 64
             ||||||||||||||||||||
Sbjct: 13687 cacctcacctggctctggct 13706
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    gcgcccgcggacccgccgccgcgc 149
              ||||||||||| ||||||||||||
Sbjct: 335448 gcgcccgcggaaccgccgccgcgc 335471
to top
>gb|DQ059320.1| Zea mays RFLP core bin marker probe p-umc124 (CBM8.03), complete
           sequence
          Length = 1162

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 ccgcggacccgccgccgcgc 149
           ||||||||||||||||||||
Sbjct: 316 ccgcggacccgccgccgcgc 335
to top
>ref|NM_152718.1| Homo sapiens von Willebrand factor C and EGF domains (VWCE), mRNA
          Length = 3292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2416 gccggtgcttcatctcctcc 2435
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tcgaggccgagcgcgcccgc 94
              ||||||||||||||||||||
Sbjct: 122075 tcgaggccgagcgcgcccgc 122094
to top
>gb|AY205235.1| Homo sapiens URG11 mRNA, complete cds
          Length = 3076

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gccggtgcttcatctcctcc 205
            ||||||||||||||||||||
Sbjct: 2166 gccggtgcttcatctcctcc 2185
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     gctcgtcggcggcgcccgcg 134
               ||||||||||||||||||||
Sbjct: 2792255 gctcgtcggcggcgcccgcg 2792236



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     cggcggcgcccgcggacccg 140
               ||||||||||||||||||||
Sbjct: 2453693 cggcggcgcccgcggacccg 2453674
to top
>ref|NM_194458.1| Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog,
           yeast) (UBE2J2), transcript variant 3, mRNA
          Length = 2396

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 166 ccgccgccgcgctcaggctcgccg 143
to top
>ref|NM_194457.1| Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog,
           yeast) (UBE2J2), transcript variant 4, mRNA
          Length = 2136

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 166 ccgccgccgcgctcaggctcgccg 143
to top
>ref|NM_194315.1| Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog,
           yeast) (UBE2J2), transcript variant 1, mRNA
          Length = 2315

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 166 ccgccgccgcgctcaggctcgccg 143
to top
>ref|NM_058167.2| Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog,
           yeast) (UBE2J2), transcript variant 2, mRNA
          Length = 2267

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 ccgccgccgcgctcagactcgccg 161
           |||||||||||||||| |||||||
Sbjct: 166 ccgccgccgcgctcaggctcgccg 143
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      tcgaggccgagcgcgcccgc 94
               ||||||||||||||||||||
Sbjct: 2151670 tcgaggccgagcgcgcccgc 2151689
to top
>gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the complete genome
          Length = 13571

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    cgcatcgaggccgagcgcgc 90
             ||||||||||||||||||||
Sbjct: 11958 cgcatcgaggccgagcgcgc 11939
to top
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aggagctcgtcggcggcgcc 130
             ||||||||||||||||||||
Sbjct: 34678 aggagctcgtcggcggcgcc 34659
to top
>emb|AL096805.1|CNS00YVB Homo sapiens genomic region containing hypervariable minisatellites
            chromosome 1[1p36.33] of Homo sapiens
          Length = 34175

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 138  ccgccgccgcgctcagactcgccg 161
            |||||||||||||||| |||||||
Sbjct: 8521 ccgccgccgcgctcaggctcgccg 8544
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>dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2331C18, complete
             sequences
          Length = 121567

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gccggtgcttcatctcctcc 205
             ||||||||||||||||||||
Sbjct: 39149 gccggtgcttcatctcctcc 39130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,944,808
Number of Sequences: 3902068
Number of extensions: 3944808
Number of successful extensions: 77763
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76019
Number of HSP's gapped (non-prelim): 1745
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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