ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 180 3e-42
3emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb... 180 3e-42
4gb|AY123083.1| Griffithsia japonica molybdenum cofactor mRNA, pa... 46 0.10
5emb|AL731846.3| Sminthopsis DNA sequence from clone XX-38L18, co... 44 0.40
6gb|BC004901.2| Homo sapiens fatty acid desaturase 3, mRNA (cDNA ... 42 1.6
7ref|NM_021727.3| Homo sapiens fatty acid desaturase 3 (FADS3), mRNA 42 1.6
8gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.6
9ref|XM_923767.2| PREDICTED: Mus musculus protein phosphatase 2 (... 42 1.6
10ref|XM_923757.2| PREDICTED: Mus musculus protein phosphatase 2 (... 42 1.6
11ref|XM_923760.2| PREDICTED: Mus musculus protein phosphatase 2 (... 42 1.6
12ref|XM_915470.2| PREDICTED: Mus musculus protein phosphatase 2 (... 42 1.6
13ref|XM_001003559.1| PREDICTED: Mus musculus protein phosphatase ... 42 1.6
14ref|XM_001003561.1| PREDICTED: Mus musculus protein phosphatase ... 42 1.6
15ref|XM_619260.3| PREDICTED: Mus musculus protein phosphatase 2 (... 42 1.6
16gb|BC065100.1| Mus musculus protein phosphatase 2 (formerly 2A),... 42 1.6
17emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BA... 42 1.6
18dbj|AK220192.1| Mus musculus mRNA for mKIAA4213 protein 42 1.6
19dbj|AK164497.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 42 1.6
20dbj|AK167530.1| Mus musculus 13 days pregnant adult female place... 42 1.6
21dbj|AK161704.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 42 1.6
22dbj|AK161507.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.6
23dbj|AK010380.1| Mus musculus ES cells cDNA, RIKEN full-length en... 42 1.6
24dbj|AK090027.1| Mus musculus nullipotent stem cell CRL-2070 NE c... 42 1.6
25gb|AF139813.1|AF139813 Homo sapiens clone pDJ759j12 chromosome 1... 42 1.6
26gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone... 42 1.6
27dbj|AP006260.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.6
28gb|AC003025.1|AC003025 Human Chromosome 11p12.2 PAC clone pDJ466... 42 1.6
29emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chr... 42 1.6
30gb|AC166061.2| Mus musculus BAC clone RP23-177N16 from chromosom... 42 1.6
31ref|XM_468359.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
32gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
33gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
34gb|AC136710.8| Mus musculus chromosome 19, clone RP23-35B13, com... 40 6.2
35gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.2
36gb|AC140320.2| Mus musculus BAC clone RP23-401C13 from chromosom... 40 6.2
37gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA... 40 6.2
38emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
39emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
40emb|AJ748323.1| Sulfolobus islandicus plasmid pARN4 40 6.2
41gb|AE005880.1| Caulobacter crescentus CB15 section 206 of 359 of... 40 6.2
42gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
43gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.2
44gb|DQ074974.1| Cordyceps bassiana strain 101M5 transposon hupfer... 40 6.2
45ref|NM_064316.3| Caenorhabditis elegans Y46G5A.12 (Y46G5A.12) mR... 40 6.2
46gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gen... 40 6.2
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
48gb|AF154916.1|AF154916 Chlamydomonas reinhardtii variable flagel... 40 6.2
49dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
50dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
51gb|M37270.1|CCRFIBNA Caulobacter crescentus basal body L-ring pr... 40 6.2
52dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
54dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2
55dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.2
56dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
57dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
58emb|AL110485.5|CEY46G5A Caenorhabditis elegans YAC Y46G5A, compl... 40 6.2
59gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 6.2
60gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
62emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
63emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
64emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4,... 40 6.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  180 bits (91), Expect = 3e-42
 Identities = 172/199 (86%)
 Strand = Plus / Minus

                                                                           
Query: 264     cgctccgccaggttctcgccaccggagacgtccacggcgcgctgcgcggcctcccgcgcc 323
               |||||||  |||| |||||| | || |||||||||| |||||| |||||||||||| |||
Sbjct: 2593652 cgctccgagaggtgctcgccgctggcgacgtccacgccgcgctccgcggcctcccgggcc 2593593

                                                                           
Query: 324     tcgctcgccagctgttccggtgggcggagggcaccccgcacggcttcccccgctccgcct 383
               |||| ||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||
Sbjct: 2593592 tcgcgcgccagctgttccggtgggcggaggccaccccgcgcggcttcccgcgctgcgcct 2593533

                                                                           
Query: 384     ccgcattcgccgccgtccttgtcccgctcgctgaggccagccacaaccgcgccgcttatc 443
               |||| | |||||||||||| ||||||||||| |||||||  |||  || ||||||  | |
Sbjct: 2593532 ccgcgtacgccgccgtcctcgtcccgctcgccgaggccaagcacctccacgccgcccacc 2593473

                                  
Query: 444     ccgtctccctccgcgccat 462
               |||||||| ||||||||||
Sbjct: 2593472 ccgtctccgtccgcgccat 2593454



 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                           
Query: 45      agccattcatggcgaggcgccgccggggaggattcgaacattaatccatgctattcccca 104
               |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||
Sbjct: 2593886 agccattcatggcgaggcgccgccggggaggactcgaacattaacccatgctcttctcca 2593827

                                                                           
Query: 105     cccgtccctgtaaatcccaagctcctgccgccgcggccgccgtagctgctatctccagcc 164
                ||  ||||| ||||||||||||||||||||  | |||||||  || || |||||| |||
Sbjct: 2593826 tccacccctgcaaatcccaagctcctgccgcatccgccgccgccgccgccatctccggcc 2593767

                    
Query: 165     tccgc 169
               |||||
Sbjct: 2593766 tccgc 2593762



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 164      ctccgcctctcctcctcatcgccg 187
                |||||||||||||||||| |||||
Sbjct: 24990068 ctccgcctctcctcctcaccgccg 24990045
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  180 bits (91), Expect = 3e-42
 Identities = 172/199 (86%)
 Strand = Plus / Minus

                                                                           
Query: 264     cgctccgccaggttctcgccaccggagacgtccacggcgcgctgcgcggcctcccgcgcc 323
               |||||||  |||| |||||| | || |||||||||| |||||| |||||||||||| |||
Sbjct: 2593596 cgctccgagaggtgctcgccgctggcgacgtccacgccgcgctccgcggcctcccgggcc 2593537

                                                                           
Query: 324     tcgctcgccagctgttccggtgggcggagggcaccccgcacggcttcccccgctccgcct 383
               |||| ||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||
Sbjct: 2593536 tcgcgcgccagctgttccggtgggcggaggccaccccgcgcggcttcccgcgctgcgcct 2593477

                                                                           
Query: 384     ccgcattcgccgccgtccttgtcccgctcgctgaggccagccacaaccgcgccgcttatc 443
               |||| | |||||||||||| ||||||||||| |||||||  |||  || ||||||  | |
Sbjct: 2593476 ccgcgtacgccgccgtcctcgtcccgctcgccgaggccaagcacctccacgccgcccacc 2593417

                                  
Query: 444     ccgtctccctccgcgccat 462
               |||||||| ||||||||||
Sbjct: 2593416 ccgtctccgtccgcgccat 2593398



 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                           
Query: 45      agccattcatggcgaggcgccgccggggaggattcgaacattaatccatgctattcccca 104
               |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||
Sbjct: 2593830 agccattcatggcgaggcgccgccggggaggactcgaacattaacccatgctcttctcca 2593771

                                                                           
Query: 105     cccgtccctgtaaatcccaagctcctgccgccgcggccgccgtagctgctatctccagcc 164
                ||  ||||| ||||||||||||||||||||  | |||||||  || || |||||| |||
Sbjct: 2593770 tccacccctgcaaatcccaagctcctgccgcatccgccgccgccgccgccatctccggcc 2593711

                    
Query: 165     tccgc 169
               |||||
Sbjct: 2593710 tccgc 2593706



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 164      ctccgcctctcctcctcatcgccg 187
                |||||||||||||||||| |||||
Sbjct: 24918274 ctccgcctctcctcctcaccgccg 24918251
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>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136490

 Score =  180 bits (91), Expect = 3e-42
 Identities = 172/199 (86%)
 Strand = Plus / Plus

                                                                         
Query: 264   cgctccgccaggttctcgccaccggagacgtccacggcgcgctgcgcggcctcccgcgcc 323
             |||||||  |||| |||||| | || |||||||||| |||||| |||||||||||| |||
Sbjct: 74357 cgctccgagaggtgctcgccgctggcgacgtccacgccgcgctccgcggcctcccgggcc 74416

                                                                         
Query: 324   tcgctcgccagctgttccggtgggcggagggcaccccgcacggcttcccccgctccgcct 383
             |||| ||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||
Sbjct: 74417 tcgcgcgccagctgttccggtgggcggaggccaccccgcgcggcttcccgcgctgcgcct 74476

                                                                         
Query: 384   ccgcattcgccgccgtccttgtcccgctcgctgaggccagccacaaccgcgccgcttatc 443
             |||| | |||||||||||| ||||||||||| |||||||  |||  || ||||||  | |
Sbjct: 74477 ccgcgtacgccgccgtcctcgtcccgctcgccgaggccaagcacctccacgccgcccacc 74536

                                
Query: 444   ccgtctccctccgcgccat 462
             |||||||| ||||||||||
Sbjct: 74537 ccgtctccgtccgcgccat 74555



 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                         
Query: 45    agccattcatggcgaggcgccgccggggaggattcgaacattaatccatgctattcccca 104
             |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||
Sbjct: 74123 agccattcatggcgaggcgccgccggggaggactcgaacattaacccatgctcttctcca 74182

                                                                         
Query: 105   cccgtccctgtaaatcccaagctcctgccgccgcggccgccgtagctgctatctccagcc 164
              ||  ||||| ||||||||||||||||||||  | |||||||  || || |||||| |||
Sbjct: 74183 tccacccctgcaaatcccaagctcctgccgcatccgccgccgccgccgccatctccggcc 74242

                  
Query: 165   tccgc 169
             |||||
Sbjct: 74243 tccgc 74247
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>gb|AY123083.1| Griffithsia japonica molybdenum cofactor mRNA, partial cds
          Length = 333

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 295 ccacggcgcgctgcgcggcctcc 317
           |||||||||||||||||||||||
Sbjct: 115 ccacggcgcgctgcgcggcctcc 93
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>emb|AL731846.3| Sminthopsis DNA sequence from clone XX-38L18, complete sequence
          Length = 48504

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 159   ccagcctccgcctctcctcctc 180
             ||||||||||||||||||||||
Sbjct: 12431 ccagcctccgcctctcctcctc 12410
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>gb|BC004901.2| Homo sapiens fatty acid desaturase 3, mRNA (cDNA clone MGC:4158
           IMAGE:3532219), complete cds
          Length = 1807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cctgccgccgcggccgccgta 148
           |||||||||||||||||||||
Sbjct: 35  cctgccgccgcggccgccgta 15
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>ref|NM_021727.3| Homo sapiens fatty acid desaturase 3 (FADS3), mRNA
          Length = 1807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cctgccgccgcggccgccgta 148
           |||||||||||||||||||||
Sbjct: 35  cctgccgccgcggccgccgta 15
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 290     gacgtccacggcgcgctgcgcggcc 314
               |||||||||| ||||||||||||||
Sbjct: 2263845 gacgtccacgccgcgctgcgcggcc 2263869
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>ref|XM_923767.2| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 6 (Ppp2r2a), mRNA
          Length = 4053

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 4   cctgccgccgcggccgccgtcgctg 28
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>ref|XM_923757.2| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 3 (Ppp2r2a), mRNA
          Length = 1324

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 55  cctgccgccgcggccgccgtcgctg 79
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>ref|XM_923760.2| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 4 (Ppp2r2a), mRNA
          Length = 2524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 55  cctgccgccgcggccgccgtcgctg 79
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>ref|XM_915470.2| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 2 (Ppp2r2a), mRNA
          Length = 4042

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 55  cctgccgccgcggccgccgtcgctg 79
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>ref|XM_001003559.1| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 2 (Ppp2r2a), mRNA
          Length = 1325

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 56  cctgccgccgcggccgccgtcgctg 80
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>ref|XM_001003561.1| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 3 (Ppp2r2a), mRNA
          Length = 2525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 56  cctgccgccgcggccgccgtcgctg 80
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>ref|XM_619260.3| PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A),
           regulatory subunit B (PR 52), alpha isoform, transcript
           variant 1 (Ppp2r2a), mRNA
          Length = 4039

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 56  cctgccgccgcggccgccgtcgctg 80
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>gb|BC065100.1| Mus musculus protein phosphatase 2 (formerly 2A), regulatory
           subunit B (PR 52), alpha isoform, mRNA (cDNA clone
           MGC:85984 IMAGE:30535680), complete cds
          Length = 4096

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 29  cctgccgccgcggccgccgtcgctg 53
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>emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BAC clone B13O20
          Length = 65076

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   gctcctgccgccgcggccgcc 145
             |||||||||||||||||||||
Sbjct: 13586 gctcctgccgccgcggccgcc 13566
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>dbj|AK220192.1| Mus musculus mRNA for mKIAA4213 protein
          Length = 2327

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 9   cctgccgccgcggccgccgtcgctg 33
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>dbj|AK164497.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330010E09 product:protein phosphatase 2
           (formerly 2A), regulatory subunit B (PR 52), alpha
           isoform, full insert sequence
          Length = 1567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 40  cctgccgccgcggccgccgtcgctg 64
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>dbj|AK167530.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530018N15
           product:protein phosphatase 2 (formerly 2A), regulatory
           subunit B (PR 52), alpha isoform, full insert sequence
          Length = 2369

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 5   cctgccgccgcggccgccgtcgctg 29
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>dbj|AK161704.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730588G06 product:protein
           phosphatase 2 (formerly 2A), regulatory subunit B (PR
           52), alpha isoform, full insert sequence
          Length = 2103

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 5   cctgccgccgcggccgccgtcgctg 29
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>dbj|AK161507.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933424C02 product:protein phosphatase 2
           (formerly 2A), regulatory subunit B (PR 52), alpha
           isoform, full insert sequence
          Length = 2380

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 14  cctgccgccgcggccgccgtcgctg 38
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>dbj|AK010380.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410004D02 product:similar to SERINE/THREONINE
           PROTEIN PHOSPHATASE 2A, 55 KDA REGULATORY SUBUNIT B,
           ALPHA ISOFORM (PP2A, SUBUNIT B, B-ALPHA ISOFORM) (PP2A,
           SUBUNIT B, B55-ALPHA ISOFORM) (PP2A, SUBUNIT B,
           PR55-ALPHA ISOFORM) (PP2A, SUBUNIT B, R2-ALPHA ISOFORM)
           [Homo sapiens], full insert sequence
          Length = 1990

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 21  cctgccgccgcggccgccgtcgctg 45
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>dbj|AK090027.1| Mus musculus nullipotent stem cell CRL-2070 NE cDNA, RIKEN
           full-length enriched library, clone:G430065N10
           product:SERINE/THREONINE PROTEIN PHOSPHATASE 2A, 55 KDA
           REGULATORY SUBUNIT B, ALPHA ISOFORM (PP2A, SUBUNIT B,
           B-ALPHA ISOFORM) (PP2A, SUBUNIT B, B55-ALPHA ISOFORM)
           (PP2A, SUBUNIT B, PR55-ALPHA ISOFORM) (PP2A, SUBUNIT B,
           R2-ALPHA ISOFORM) (PP2A, SUBUNIT B, BRA ISOFORM) homolog
           [Rattus norvegicus], full insert sequence
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 cctgccgccgcggccgccgtagctg 152
           |||||||||||||||||||| ||||
Sbjct: 42  cctgccgccgcggccgccgtcgctg 66
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>gb|AF139813.1|AF139813 Homo sapiens clone pDJ759j12 chromosome 11 map 11q13, complete sequence
          Length = 142092

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   cctgccgccgcggccgccgta 148
             |||||||||||||||||||||
Sbjct: 96314 cctgccgccgcggccgccgta 96294
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>gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone pDJ519o13 containing human gene
              for ferritin heavy chain (FTH), complete sequence
          Length = 196080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 128    cctgccgccgcggccgccgta 148
              |||||||||||||||||||||
Sbjct: 120482 cctgccgccgcggccgccgta 120502
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>dbj|AP006260.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-61G16, complete
             sequence
          Length = 163024

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   cctgccgccgcggccgccgta 148
             |||||||||||||||||||||
Sbjct: 53689 cctgccgccgcggccgccgta 53709
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>gb|AC003025.1|AC003025 Human Chromosome 11p12.2 PAC clone pDJ466a11, complete sequence
          Length = 112309

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   cctgccgccgcggccgccgta 148
             |||||||||||||||||||||
Sbjct: 20622 cctgccgccgcggccgccgta 20642
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>emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chromosome 14, complete
             sequence
          Length = 216332

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   cctgccgccgcggccgccgtagctg 152
             |||||||||||||||||||| ||||
Sbjct: 45065 cctgccgccgcggccgccgtcgctg 45089
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>gb|AC166061.2| Mus musculus BAC clone RP23-177N16 from chromosome 14, complete sequence
          Length = 213071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 128    cctgccgccgcggccgccgtagctg 152
              |||||||||||||||||||| ||||
Sbjct: 175786 cctgccgccgcggccgccgtcgctg 175810
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>ref|XM_468359.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 cgcggcctcccgcgcctcgc 327
           ||||||||||||||||||||
Sbjct: 142 cgcggcctcccgcgcctcgc 161
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>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   tcgccgccgtccttgtcccg 409
             ||||||||||||||||||||
Sbjct: 11241 tcgccgccgtccttgtcccg 11260
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>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18
              map near E10005S, complete sequence
          Length = 140920

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    tcgccgccgtccttgtcccg 409
              ||||||||||||||||||||
Sbjct: 131491 tcgccgccgtccttgtcccg 131510
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>gb|AC136710.8| Mus musculus chromosome 19, clone RP23-35B13, complete sequence
          Length = 206056

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    agctgctatctccagcctcc 167
              ||||||||||||||||||||
Sbjct: 120209 agctgctatctccagcctcc 120190
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     caccggagacgtccacggcg 302
               ||||||||||||||||||||
Sbjct: 5947224 caccggagacgtccacggcg 5947205
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>gb|AC140320.2| Mus musculus BAC clone RP23-401C13 from chromosome 19, complete sequence
          Length = 197365

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    agctgctatctccagcctcc 167
              ||||||||||||||||||||
Sbjct: 136288 agctgctatctccagcctcc 136307
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>gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA, complete cds
          Length = 3152

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 166 ccgcctctcctcctcatcgccggc 189
           ||||||| ||||||||||||||||
Sbjct: 54  ccgcctcccctcctcatcgccggc 77
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>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08,
              complete sequence
          Length = 186642

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    tcgccgccgtccttgtcccg 409
              ||||||||||||||||||||
Sbjct: 178203 tcgccgccgtccttgtcccg 178184
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
            complete sequence
          Length = 130273

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  ccgcctctcctcctcatcgccggc 189
            ||||||| ||||||||||||||||
Sbjct: 5148 ccgcctcccctcctcatcgccggc 5125
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>emb|AJ748323.1| Sulfolobus islandicus plasmid pARN4
          Length = 26476

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 240 cttccgatccccctccgccg 259
           ||||||||||||||||||||
Sbjct: 160 cttccgatccccctccgccg 141
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>gb|AE005880.1| Caulobacter crescentus CB15 section 206 of 359 of the complete genome
          Length = 10163

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  cgccgcggccgccgtagctg 152
            ||||||||||||||||||||
Sbjct: 3173 cgccgcggccgccgtagctg 3154
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>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17,
              complete sequence
          Length = 141041

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    aaatcccaagctcctgccgc 135
              ||||||||||||||||||||
Sbjct: 116548 aaatcccaagctcctgccgc 116529
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 292     cgtccacggcgcgctgcgcg 311
               ||||||||||||||||||||
Sbjct: 3889814 cgtccacggcgcgctgcgcg 3889795
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>gb|DQ074974.1| Cordyceps bassiana strain 101M5 transposon hupfer transposase gene,
           partial cds
          Length = 457

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 gccgccgcggccgccgtagc 150
           ||||||||||||||||||||
Sbjct: 103 gccgccgcggccgccgtagc 122
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>ref|NM_064316.3| Caenorhabditis elegans Y46G5A.12 (Y46G5A.12) mRNA, complete cds
          Length = 820

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 tctcctcctcatcgccggcg 190
           ||||||||||||||||||||
Sbjct: 483 tctcctcctcatcgccggcg 464
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>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds
          Length = 11462

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 298  cggcgcgctgcgcggcctcccgcgcctc 325
            ||||||||||||| |||| |||||||||
Sbjct: 3519 cggcgcgctgcgccgccttccgcgcctc 3492
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 166      ccgcctctcctcctcatcgccggc 189
                ||||||| ||||||||||||||||
Sbjct: 23562467 ccgcctcccctcctcatcgccggc 23562444



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 390      tcgccgccgtccttgtcccg 409
                ||||||||||||||||||||
Sbjct: 17805823 tcgccgccgtccttgtcccg 17805804
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>gb|AF154916.1|AF154916 Chlamydomonas reinhardtii variable flagellar number protein (VFL1)
           gene, complete cds
          Length = 8835

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 298 cggcgcgctgcgcggcctcccgcgcctc 325
           ||||||||||||||||||| | ||||||
Sbjct: 914 cggcgcgctgcgcggcctcacccgcctc 941
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 390      tcgccgccgtccttgtcccg 409
                ||||||||||||||||||||
Sbjct: 13773682 tcgccgccgtccttgtcccg 13773701
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 116      aaatcccaagctcctgccgc 135
                ||||||||||||||||||||
Sbjct: 15262849 aaatcccaagctcctgccgc 15262830
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>gb|M37270.1|CCRFIBNA Caulobacter crescentus basal body L-ring protein precursor, gene,
           complete cds
          Length = 1108

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 cgccgcggccgccgtagctg 152
           ||||||||||||||||||||
Sbjct: 850 cgccgcggccgccgtagctg 831
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 390      tcgccgccgtccttgtcccg 409
                ||||||||||||||||||||
Sbjct: 12943875 tcgccgccgtccttgtcccg 12943894
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 308      cgcggcctcccgcgcctcgc 327
                ||||||||||||||||||||
Sbjct: 34839987 cgcggcctcccgcgcctcgc 34840006
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 290     gacgtccacggcgcgctgcgcggc 313
               ||||||||||||| ||||||||||
Sbjct: 6600909 gacgtccacggcgggctgcgcggc 6600886



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 131     gccgccgcggccgccgtagc 150
               ||||||||||||||||||||
Sbjct: 2641986 gccgccgcggccgccgtagc 2642005
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 291     acgtccacggcgcgctgcgcggcc 314
               ||||| ||||||||||||||||||
Sbjct: 4651484 acgtctacggcgcgctgcgcggcc 4651507
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   tcgccgccgtccttgtcccg 409
             ||||||||||||||||||||
Sbjct: 18172 tcgccgccgtccttgtcccg 18191
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>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0053L11
          Length = 147123

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   cgcggcctcccgcgcctcgc 327
             ||||||||||||||||||||
Sbjct: 61582 cgcggcctcccgcgcctcgc 61601
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>emb|AL110485.5|CEY46G5A Caenorhabditis elegans YAC Y46G5A, complete sequence
          Length = 197908

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tctcctcctcatcgccggcg 190
             ||||||||||||||||||||
Sbjct: 86912 tctcctcctcatcgccggcg 86931
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     ctcgctcgccagctgttccg 342
               ||||||||||||||||||||
Sbjct: 3813332 ctcgctcgccagctgttccg 3813313
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 116      aaatcccaagctcctgccgc 135
                ||||||||||||||||||||
Sbjct: 15271090 aaatcccaagctcctgccgc 15271071
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 390      tcgccgccgtccttgtcccg 409
                ||||||||||||||||||||
Sbjct: 13855680 tcgccgccgtccttgtcccg 13855699
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>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
              complete sequence
          Length = 139298

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    ccgcctctcctcctcatcgccggc 189
              ||||||| ||||||||||||||||
Sbjct: 118370 ccgcctcccctcctcatcgccggc 118347
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>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    ctccgcctctcctcctcatcgccg 187
              |||||||||||||||||| |||||
Sbjct: 117099 ctccgcctctcctcctcaccgccg 117122
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>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04,
            complete sequence
          Length = 164645

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tcgccgccgtccttgtcccg 409
            ||||||||||||||||||||
Sbjct: 2578 tcgccgccgtccttgtcccg 2559


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,767,872
Number of Sequences: 3902068
Number of extensions: 2767872
Number of successful extensions: 71672
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70192
Number of HSP's gapped (non-prelim): 1480
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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