Clone Information

BLAST Search Result

Clone Name	bastl10g02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)	34	0.086
2	PHYB_SORBI (P93527) Phytochrome B	32	0.33
3	RS5_GLOVI (Q7NEG9) 30S ribosomal protein S5	32	0.43
4	TIAM1_MOUSE (Q60610) T-lymphoma invasion and metastasis-inducing...	32	0.43
5	DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-)...	32	0.56
6	WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7...	31	0.73
7	MBA2_ECOLI (P07112) Mobilization protein A	31	0.73
8	VGLE_BHV1S (Q08101) Glycoprotein E precursor	31	0.95
9	HSLV_CHRVO (Q7P113) ATP-dependent protease hslV (EC 3.4.25.-)	31	0.95
10	MYOC_DICDI (P42522) Myosin IC heavy chain	30	1.2
11	SP2_HUMAN (Q02086) Transcription factor Sp2	30	1.2
12	NIA2_SOYBN (P39870) Inducible nitrate reductase [NADH] 2 (EC 1.7...	30	1.6
13	ACRO_PIG (P08001) Acrosin precursor (EC 3.4.21.10) (53 kDa fucos...	30	1.6
14	PMD1_YEAST (P32634) Negative regulator of sporulation PMD1	30	1.6
15	CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-...	30	1.6
16	ICAM5_MOUSE (Q60625) Intercellular adhesion molecule 5 precursor...	30	1.6
17	DNAA_STRCH (Q9ZH75) Chromosomal replication initiator protein dnaA	30	2.1
18	SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein	30	2.1
19	SYD_MAGMM (Q2W3D5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar...	30	2.1
20	PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-pho...	30	2.1
21	HSLV_RALSO (Q8Y3D7) ATP-dependent protease hslV (EC 3.4.25.-)	30	2.1
22	SNX20_MOUSE (Q9D2Y5) Sorting nexin-20	29	2.8
23	OPGH_RALSO (Q8XVC2) Glucans biosynthesis glucosyltransferase H (...	29	2.8
24	V70K_TYMVA (P20131) 69 kDa protein	29	2.8
25	CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long...	29	2.8
26	OST4_HUMAN (Q9Y661) Heparan sulfate glucosamine 3-O-sulfotransfe...	29	2.8
27	SOX13_HUMAN (Q9UN79) SOX-13 protein (Type 1 diabetes autoantigen...	29	3.6
28	MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing pro...	29	3.6
29	ZCHC8_XENLA (Q6DD45) Zinc finger CCHC domain-containing protein 8	29	3.6
30	DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-re...	29	3.6
31	TAU_BOVIN (P29172) Microtubule-associated protein tau (Neurofibr...	29	3.6
32	TAU_CAPHI (O02828) Microtubule-associated protein tau (Neurofibr...	29	3.6
33	CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 pr...	29	3.6
34	TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibr...	28	4.7
35	NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neur...	28	4.7
36	GAB2_HUMAN (Q9UQC2) GRB2-associated binding protein 2 (GRB2-asso...	28	4.7
37	WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7...	28	4.7
38	TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibril...	28	4.7
39	K10_DROME (P13468) DNA-binding protein K10 (Female sterile prote...	28	4.7
40	DNLI_METMA (Q8PTK1) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo...	28	4.7
41	WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.1...	28	6.1
42	UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (E...	28	6.1
43	ALS1_CANAL (P46590) Agglutinin-like protein 1 precursor	28	6.1
44	SAFB2_HUMAN (Q14151) Scaffold attachment factor B2	28	6.1
45	COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Conta...	28	6.1
46	SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inos...	28	6.1
47	F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST...	28	6.1
48	ZDHC5_PONPY (Q5R838) Probable palmitoyltransferase ZDHHC5 (EC 2....	28	6.1
49	ZDHC5_PANTR (Q2THX1) Probable palmitoyltransferase ZDHHC5 (EC 2....	28	6.1
50	ZDHC5_HUMAN (Q9C0B5) Probable palmitoyltransferase ZDHHC5 (EC 2....	28	6.1
51	CWC22_USTMA (Q4PCY0) Pre-mRNA-splicing factor CWC22	28	6.1
52	NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur...	28	6.1
53	FA53C_MOUSE (Q8BXQ8) Protein FAM53C	28	6.1
54	UBQL4_HUMAN (Q9NRR5) Ubiquilin-4 (Ataxin-1 ubiquitin-like-intera...	28	6.1
55	TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily me...	28	6.1
56	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	28	8.0
57	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	28	8.0
58	UL13_HCMVA (P16755) Hypothetical protein UL13	28	8.0
59	TWST1_PONPY (Q8MIB9) Twist-related protein 1	28	8.0
60	IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Ir...	28	8.0
61	CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor	28	8.0
62	HSLV_NITEU (Q82SP7) ATP-dependent protease hslV (EC 3.4.25.-)	28	8.0
63	H1_PARAN (P02256) Histone H1, gonadal	28	8.0
64	PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil...	28	8.0
65	BBC3_HUMAN (Q9BXH1) Bcl-2-binding component 3 (p53 up-regulated ...	28	8.0
66	CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.4...	28	8.0

>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)|
          Length = 719

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = -3

Query: 196 GPEHHRIERREPDRDSGGHFQRGSFWGFGRSGEGGTTAELP-----GSDWAPIGRRF 41
           G  + R+E+R  DR  G  F  G  +G  R G GG + +LP      S+ AP  + F
Sbjct: 190 GIRNGRVEKRRDDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKNF 246

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>PHYB_SORBI (P93527) Phytochrome B|
          Length = 1178

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -3

Query: 250 ATTAESESIRKPAALRSPGPEHHRIERREPDRDSGGHFQRGSFWGFGRSGEGGTTA 83
           A+ + +   R P++ R   P H         + SGG   R    G G  G GGT A
Sbjct: 2   ASGSRATPTRSPSSARPEAPRHAHHHHHHHSQSSGGSTSRAGGGGGGGGGGGGTAA 57

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>RS5_GLOVI (Q7NEG9) 30S ribosomal protein S5|
          Length = 223

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -3

Query: 217 PAALRSPGPEHHRIERREPDRDSGGHFQRGSFWGFGRSG 101
           P     PGPE       +PDR+SGG  +RG   G GR G
Sbjct: 18  PGGPGGPGPEQ---APEDPDRESGGERRRGRGRGAGRGG 53

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>TIAM1_MOUSE (Q60610) T-lymphoma invasion and metastasis-inducing protein 1|
           (TIAM-1 protein)
          Length = 1591

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 189 NTTESSAASPIGTVAAISNGGAFGDSGDRAREGLLPSFRAQI 64
           N T SS + P G     S+ G+   +GDRAR+G+  +FR ++
Sbjct: 351 NATNSSYSPPTGRAFVGSDSGS-SSTGDRARQGVYENFRREL 391

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>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box|
           protein 1) (Helicase CA1)
          Length = 617

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
 Frame = -3

Query: 217 PAALRSPG-PEHHRIERREPDRDSGGHFQR---------GSFWGFGRSGEGGTTA 83
           P  LRS G P   R   ++ D+ +GG F R         G F+GF +   GGT+A
Sbjct: 29  PPHLRSRGKPSFERSTPKQEDKVTGGDFFRRAGRQTGNNGGFFGFSKERNGGTSA 83

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>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein|
            kinase with no lysine 4) (Protein kinase,
            lysine-deficient 4)
          Length = 1222

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 24/79 (30%), Positives = 31/79 (39%)
 Frame = +3

Query: 24   GSPKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPGD 203
            G P+   R  + +  EP    + P SP L    KLP    PPL+   S        GP  
Sbjct: 989  GKPQLVGRFQVTSSKEPAEPPLQPASPTLSRSLKLPS---PPLTSESSDTEDSAAGGPET 1045

Query: 204  LRAAGFLIDSDSAVVALAL 260
              A   L +SD A   L +
Sbjct: 1046 REA---LAESDRAAEGLGV 1061

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>MBA2_ECOLI (P07112) Mobilization protein A|
          Length = 708

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 24/72 (33%), Positives = 29/72 (40%)
 Frame = -3

Query: 265 HRRARATTAESESIRKPAALRSPGPEHHRIERREPDRDSGGHFQRGSFWGFGRSGEGGTT 86
           H R R +       R   A R+ GPEH    RR P     GH    +    G+ G GG  
Sbjct: 249 HERNRQSEEIQRHQRVSGADRTAGPEHGDTGRRSP----AGHEPDPA----GQRGAGGGV 300

Query: 85  AELPGSDWAPIG 50
           AE P  D   +G
Sbjct: 301 AESPAPDRGGMG 312

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>VGLE_BHV1S (Q08101) Glycoprotein E precursor|
          Length = 575

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 256 ARATTAESESIRKPAALRSPGPEHHRIERREPDRDSGGHFQ 134
           A A  A  +  R+PA   +PGP  HR   R P R  G  F+
Sbjct: 184 AGAQGAARDEEREPATGPTPGPPPHRTTTRAPPRRHGARFR 224

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>HSLV_CHRVO (Q7P113) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 183

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
 Frame = -1

Query: 186 TTESSAASPIGTVAAISNGGAFGDSGDRA---REGLLPSFRAQIGLRSAGDFAILGNQTR 16
           T       P   +AAI +GGAF  S  RA      L P    +  L  AGD  I  N   
Sbjct: 113 TGNGDVLEPEQGIAAIGSGGAFAQSAARALFENTDLAPEVVVKKSLEIAGDICIYTNHNH 172

Query: 15  GFELL 1
             E L
Sbjct: 173 LIETL 177

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>MYOC_DICDI (P42522) Myosin IC heavy chain|
          Length = 1181

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +3

Query: 6    ARSPGFGSPKWRNRRPIGAQSEPGSSAVVPP----SPDLPNPQKLPRWKWPPLSRSG 164
            A +PG G+P  +   P+     PG SA++ P    S  LP+P   P  K P  +  G
Sbjct: 1029 APAPG-GAPMMKKPAPVPGGPAPGGSAIMKPAGGVSKPLPSPTGAPMMKKPAPTAPG 1084

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>SP2_HUMAN (Q02086) Transcription factor Sp2|
          Length = 606

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 81  SAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPGDL 206
           +AV PP+P  P P+KL   K  PL  S  + S    S  G++
Sbjct: 45  AAVTPPAPPQPTPRKLVPIKPAPLPLSPGKNSFGILSSKGNI 86

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>NIA2_SOYBN (P39870) Inducible nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR)|
          Length = 890

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 96  PSPDLPNPQKLPRWKWPPLSRSGS 167
           P PD+P P+KLP+   PPLS S S
Sbjct: 23  PGPDIPRPKKLPQAP-PPLSDSSS 45

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>ACRO_PIG (P08001) Acrosin precursor (EC 3.4.21.10) (53 kDa fucose-binding|
           protein) [Contains: Acrosin light chain; Acrosin heavy
           chain]
          Length = 415

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +3

Query: 30  PKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPP 149
           P W  +RP G   +PGS    P  P  P P   P    PP
Sbjct: 321 PPWYFQRPPGPSQQPGSRPRPPAPPPAPPPPPPPPPPPPP 360

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>PMD1_YEAST (P32634) Negative regulator of sporulation PMD1|
          Length = 1753

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = +3

Query: 45   RRPIGAQSEPGSSAVVPPSP-------DLPNPQKLPRWKWPPLSRSGSRRS 176
            RR     S  GSSA +P SP        LP  +K+P    PP+ ++ SRRS
Sbjct: 903  RRNSNQISHLGSSASLPNSPILPVLNIPLPPQEKIPLEPLPPVPKAPSRRS 953

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>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 938

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 86  SSPSLARSPESPKAPPLEMAATVP 157
           SSPS   SPE P APP + ++T P
Sbjct: 270 SSPSSTSSPEGPPAPPKQHSSTSP 293

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>ICAM5_MOUSE (Q60625) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 917

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 30  PKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRW 185
           P W + +P  A  EPG S  +  S + P P++        L R+G++R +RW
Sbjct: 33  PFWADLQPRVALVEPGGSLWLNCSTNCPRPER--GGLETSLRRNGTQRGLRW 82

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>DNAA_STRCH (Q9ZH75) Chromosomal replication initiator protein dnaA|
          Length = 624

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 205 RSPGPEHHRIERREPDRDSGGHFQRGSFWGFGRSG 101
           RS  PEH   E++ PDR   G   R    G GR+G
Sbjct: 227 RSGPPEHQGYEQQRPDRQDQGQGPRQGGHGPGRTG 261

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>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein|
          Length = 977

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +3

Query: 51  PIGAQSEPGSSAVVPPSPDLPNPQKLPR 134
           P  AQS P  +AV+PPSP LP P   PR
Sbjct: 422 PPRAQSAPPEAAVLPPSP-LPAPVASPR 448

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>SYD_MAGMM (Q2W3D5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 876

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +2

Query: 92  PSLARSPESPKAPPLEMAATVPIGLAALDSVVFWPGGPES 211
           P   RSP    A    +A  V IGL+ LD +  WPG P S
Sbjct: 230 PPAFRSPSDRSATSEFVAGLVNIGLSRLDKI--WPGMPSS 267

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>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
            3.1.3.56)
          Length = 1006

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 229  SIRKPAALRSPGPEHHRIERREPDRDSGGHFQRGS 125
            S  +  A RSP P+  R+ R  PDR S G   RGS
Sbjct: 903  SRERRGASRSPSPQSRRLSRVAPDRSSNGS-SRGS 936

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>HSLV_RALSO (Q8Y3D7) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 178

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = -1

Query: 186 TTESSAASPIGTVAAISNGGAFGDSGDRA---REGLLPSFRAQIGLRSAGDFAILGNQTR 16
           T       P G +AAI +GGA+  S  +A      L P    +  LR AG+  I  N   
Sbjct: 113 TGNGDVLDPEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNF 172

Query: 15  GFELL 1
             E L
Sbjct: 173 VIETL 177

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>SNX20_MOUSE (Q9D2Y5) Sorting nexin-20|
          Length = 313

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +3

Query: 24  GSPKWRNRRPIGAQSEPGSSAVVPPSPDLPNP 119
           GSP WR   PI          V+PP PDLP P
Sbjct: 8   GSPGWRG--PINQCRTRTRQEVLPPGPDLPCP 37

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>OPGH_RALSO (Q8XVC2) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)|
          Length = 862

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 30  PKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRW 137
           P WR RR IG     G++ V    PD P+P+ + R+
Sbjct: 147 PIWRARRAIGRLFSGGTAPVPYEQPDSPDPKGIWRF 182

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>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +2

Query: 29  PKMAKSPADRSPI*ARKLGSSPSLARSPESPKAPPLEMAATVPIGLAALDS 181
           P+   SPA       R LG +PS    P++    P    A  P  +A LDS
Sbjct: 439 PRRLPSPATPPQSPLRDLGRTPSFPTPPKTSTRAPESCIAAPPTDIAPLDS 489

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>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -1

Query: 204  GPPGQNTTESSAASPIGTVAAISNGGAFGDSGDRAREGLLPSFRAQIGL 58
            GPPG +        P G        GA G +GD  R+G LP  R + GL
Sbjct: 1773 GPPGLDGRSGLDGKP-GAAGPSGPNGAAGKAGDPGRDG-LPGLRGEQGL 1819

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>OST4_HUMAN (Q9Y661) Heparan sulfate glucosamine 3-O-sulfotransferase 4 (EC|
           2.8.2.23) (Heparan sulfate D-glucosaminyl
           3-O-sulfotransferase 4) (Heparan sulfate
           3-O-sulfotransferase 4) (h3-OST-4)
          Length = 456

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = +3

Query: 51  PIGAQSEPGSSAVVPPSPD----LPNPQKLPRWKWPP 149
           P+  Q  PG++A  PPSP     LP P +L     PP
Sbjct: 62  PLALQESPGAAAEPPPSPPPPSLLPTPVRLGAPSQPP 98

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>SOX13_HUMAN (Q9UN79) SOX-13 protein (Type 1 diabetes autoantigen ICA12) (Islet|
           cell antigen 12)
          Length = 889

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +3

Query: 51  PIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWP-----PLSRSGSRRSIRWCSGPGDLRAA 215
           P+   S+P +    P +P+LPN    P  K       P S  G  R ++  S P  L   
Sbjct: 267 PLQEPSQPLNLTAKPKAPELPNTSSSPSLKMSSCVPRPPSHGGPTRDLQ--SSPPSL-PL 323

Query: 216 GFLIDSDSAVVAL 254
           GFL + D+   A+
Sbjct: 324 GFLGEGDAVTKAI 336

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>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein|
           (Mitogen-activated protein kinase 1-interacting protein
           1)
          Length = 263

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +3

Query: 96  PSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPG 200
           P P+LP P   P     PL   GS  S  W  G G
Sbjct: 52  PFPELPRPNSAPTDPVGPLGTQGSMSSGPWAPGMG 86

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>ZCHC8_XENLA (Q6DD45) Zinc finger CCHC domain-containing protein 8|
          Length = 743

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 24  GSPKWRNRRPIGAQSEPGSSA-VVPPSPDLPNPQKLPRWKWPP 149
           GSP +    P+   + P +    +PP P  P P  LP+   PP
Sbjct: 460 GSPSYGTPPPLPRGTPPSTPPNFIPPPPPTPTPPPLPKGTPPP 502

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>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = +3

Query: 15  PGFGSPKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSG 164
           PG G P      P  A   PG + + PP P LP    +P    PPL   G
Sbjct: 558 PGVGPPP-----PPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602

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>TAU_BOVIN (P29172) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 447

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 18  GFGSPKWRNRRPIGAQSEPGSSAVVP--PSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCS 191
           G+ SP        G+   PGS +  P  P+P    P+K+   + PP S S ++  ++   
Sbjct: 202 GYSSP--------GSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSAAKSRLQAAP 253

Query: 192 GP 197
           GP
Sbjct: 254 GP 255

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>TAU_CAPHI (O02828) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 402

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 18  GFGSPKWRNRRPIGAQSEPGSSAVVP--PSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCS 191
           G+ SP        G+   PGS +  P  P+P    P+K+   + PP S S ++  ++   
Sbjct: 157 GYSSP--------GSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSAAKSRLQAAP 208

Query: 192 GP 197
           GP
Sbjct: 209 GP 210

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>CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 protein)|
          Length = 333

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = +3

Query: 9   RSPGFGSPKWRNRRPIGAQSEPGSSAVVPPSPDLPN---PQKLPRWKW--PP 149
           ++PG   P+ + R P GA  +PG     PP P  P    PQ+ P  ++  PP
Sbjct: 46  QTPGGYPPQQQQRPPTGAPQQPGGYP-TPPPPGAPGGYPPQQQPAGQYGAPP 96

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>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = +3

Query: 15  PGFGSPKWRNRRP----IGAQSEPGSSAVVP--PSPDLPNPQKLPRWKWPPLSRSGSRRS 176
           PG G P     R      G+   PGS +  P  P+P    P+K+   + PP S S S+  
Sbjct: 474 PGSGEPPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSASKSR 533

Query: 177 IRWCSGP 197
           ++    P
Sbjct: 534 LQTAPVP 540

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>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1090

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +2

Query: 29  PKMAKSPAD-RSPI*ARKLGS--SPSLARSPESPKAP 130
           P  AKSPA+ +SP  A+  G   SP  A+SP  PK+P
Sbjct: 530 PGEAKSPAEAKSPGEAKSPGEAKSPGEAKSPAEPKSP 566



 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +2

Query: 29  PKMAKSPAD-RSPI*ARKLGS--SPSLARSPESPKAP 130
           P  AKSPA+ +SP  A+      SP  A+SP  PK+P
Sbjct: 656 PAEAKSPAEAKSPAEAKSPAEVKSPGEAKSPAEPKSP 692

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>GAB2_HUMAN (Q9UQC2) GRB2-associated binding protein 2 (GRB2-associated binder|
           2) (pp100)
          Length = 676

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 72  PGSSAVVPPS-PDLPNPQKLPRW----KWPPLSRS 161
           PG SA+ PP  P  P+  + PRW    + PP+S +
Sbjct: 344 PGDSAIAPPPRPPKPSQAETPRWGSPQQRPPISEN 378

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>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1243

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +3

Query: 51  PIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPGDLRAAGFLID 230
           P      PG  +V PP P+ P   +   + +   S S +      C   G L ++GFL  
Sbjct: 541 PATVPMAPGPPSVFPPEPEEPEADQHQPFLFRHASYSSTTSD---CETDGYLSSSGFLDA 597

Query: 231 SDSAV 245
           SD A+
Sbjct: 598 SDPAL 602

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>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 751

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = +3

Query: 15  PGFGSPKWRNRRP----IGAQSEPGSSAVVP--PSPDLPNPQKLPRWKWPPLSRSGSRRS 176
           PG G P     R      G+   PGS +  P  P+P    P+K+   + PP S S S+  
Sbjct: 493 PGSGEPPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSASKSR 552

Query: 177 IRWCSGP 197
           ++    P
Sbjct: 553 LQTAPVP 559

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>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 10/49 (20%)
 Frame = +3

Query: 15  PGF-----GSPKWRNRRPIGAQSEPGSSAVVPPSPD-----LPNPQKLP 131
           PGF     GSPK ++ + I  Q  P  +   PPSP+      PN Q+ P
Sbjct: 107 PGFKHNQVGSPKKKSMKGIKQQQHPSPNQQQPPSPNQQQHPSPNQQQHP 155

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>DNLI_METMA (Q8PTK1) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 568

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
 Frame = -3

Query: 265 HRRARATTAESESIRKPAALRSPGPEHHRIERREPDRDSGGHFQRGSFWGFGRSGEGGTT 86
           +R A     E   ++ P ++ SPG       +++P  D+      G+ WGFGR       
Sbjct: 400 YREALKAGHEGVMVKNPNSVYSPGKRGKNWLKKKPLMDTLDLVIVGAEWGFGR------R 453

Query: 85  AELPGS----DWAPIGRRFRHFGEPNPGL 11
           A L GS     + P   RF   G+   GL
Sbjct: 454 ANLIGSYTVACYDPDTTRFLQVGKVGTGL 482

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>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein|
            kinase with no lysine 4) (Protein kinase,
            lysine-deficient 4)
          Length = 1222

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 23/79 (29%), Positives = 30/79 (37%)
 Frame = +3

Query: 24   GSPKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPGD 203
            G P+   R  + +  EP    + P SP L    KLP    P L+   S        GP  
Sbjct: 989  GKPQLVGRFQVTSSKEPAEPPLQPASPTLSRSLKLPT---PQLTSESSDTEDSAAGGPET 1045

Query: 204  LRAAGFLIDSDSAVVALAL 260
              A   L +SD A   L +
Sbjct: 1046 REA---LAESDRAAEGLGV 1061

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>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
 Frame = +3

Query: 30  PKWRNRRPIGAQSEPGSSA-----VVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSG 194
           P+ R +    ++S+PG SA       PP P  P P   PR    P +  GSRR  R  S 
Sbjct: 104 PRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPR----PRAWRGSRRRSRPGSR 159

Query: 195 P-------GDLRAAG 218
           P       GDL  +G
Sbjct: 160 PQTRRSCSGDLDGSG 174

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>ALS1_CANAL (P46590) Agglutinin-like protein 1 precursor|
          Length = 1260

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
 Frame = -1

Query: 267  PTEEREQPRXXXXXXXXXX----XSGPPGQNTTESSAASPIGTVAAISNGGAFGD----- 115
            PT  REQP                S P G N   +S+ +P+ TVA  +   A  +     
Sbjct: 1012 PTNTREQPTTLSTTSNSITEDITTSQPTGDNGDNTSSTNPVPTVATSTLASASEEDNKSG 1071

Query: 114  SGDRAREGLLPSFRAQIGLRSA 49
            S + A   L PS     GL ++
Sbjct: 1072 SHESASTSLKPSMGENSGLTTS 1093

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>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2|
          Length = 953

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 190 EHHRIERREPDRDSGGHFQRGSFWGFGRSGEGG 92
           + H I+RRE  R   G  + G  +G  R G GG
Sbjct: 777 QDHAIDRREGSRPMMGDHRDGQHYGDDRHGHGG 809

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>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
            (Endostatin-XV)]
          Length = 1367

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +3

Query: 15   PGFGSPKWRNRRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSG 194
            PGFG P      P G    PG  A++  +  LP P   P     P    GSR  +   S 
Sbjct: 1066 PGFGRPGVPG--PPGPPGPPGPPAILGAAVALPGPPGPPGQPGLP----GSRNLVTGLSD 1119

Query: 195  PGDLRAAGFLI 227
             GD+     L+
Sbjct: 1120 MGDMLQKAHLV 1130

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>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 15   PGFGSPKWRNRRPIGAQSEPGSSAVVPPSPDLPN--PQKLPRWK 140
            PG  + +  +R+P   ++ PG+ A VPP  + P   P+  PR K
Sbjct: 1294 PGKAAERPSHRKPASDEAPPGAGASVPPPLEAPPLVPKVPPRRK 1337

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>F10A1_CHICK (Q5ZLF0) Hsc70-interacting protein (Hip) (Protein ST13 homolog)|
           (Protein FAM10A1)
          Length = 361

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = -3

Query: 265 HRRARATTAESESIR-KPAALRSPGPEHHRIERREPDRDSGGHFQRGSFWGFGRSGEGGT 89
           HRR      E + I+ +   ++    EH R +R E  R   G  Q   F GF     GG 
Sbjct: 232 HRRKYERKREEKEIKERMERVKKAREEHERAQREEEARRQAGGAQ---FGGFPGGFPGGF 288

Query: 88  TAELPG 71
              +PG
Sbjct: 289 PGAMPG 294

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>ZDHC5_PONPY (Q5R838) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 5) (DHHC-5)
          Length = 715

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 198 PGQNTTESSAASPIGTVAAISNGGAFGDSGDRAREGLLPSFRAQIGL 58
           PG +++ +SAA P  + A +S G +  +    A     PS+R++  L
Sbjct: 356 PGYSSSSTSAAMPHSSSAKLSRGDSLKEPTSIAESSRHPSYRSEPSL 402

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>ZDHC5_PANTR (Q2THX1) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 5) (DHHC-5)
          Length = 715

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 198 PGQNTTESSAASPIGTVAAISNGGAFGDSGDRAREGLLPSFRAQIGL 58
           PG +++ +SAA P  + A +S G +  +    A     PS+R++  L
Sbjct: 356 PGYSSSSTSAAMPHSSSAKLSRGDSLKEPTSIAESSRHPSYRSEPSL 402

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>ZDHC5_HUMAN (Q9C0B5) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 5) (DHHC-5) (Zinc
           finger protein 375)
          Length = 715

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 198 PGQNTTESSAASPIGTVAAISNGGAFGDSGDRAREGLLPSFRAQIGL 58
           PG +++ +SAA P  + A +S G +  +    A     PS+R++  L
Sbjct: 356 PGYSSSSTSAAMPHSSSAKLSRGDSLKEPTSIAESSRHPSYRSEPSL 402

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>CWC22_USTMA (Q4PCY0) Pre-mRNA-splicing factor CWC22|
          Length = 886

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -3

Query: 265 HRRARATT----AESESIRKPAALRSPGPEHHRIERREPDRDSGGH 140
           H+R R+ T    + S S R P+  RSP P   R  R   DR    +
Sbjct: 31  HKRKRSPTRSVSSRSTSSRSPSRSRSPPPRSRRRRRSSRDRSQSSN 76

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>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1026

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +2

Query: 2   SSSKPRVWFPKMAKSPADRSPI*ARKLGSSPSLARSPESPKAPPLEMA 145
           + S   V  P+ AKSPA       ++   SP+ A+SPE  K+P  E A
Sbjct: 572 AKSPAEVKSPEKAKSPA-------KEEAKSPAEAKSPEKAKSPVKEEA 612



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 38  AKSPAD-RSPI*ARKLGSSPSLARSPESPKAPPLEMAATVP 157
           AKSPA+ +SP   ++   SP+  +SPE  K+P  E A + P
Sbjct: 524 AKSPAEAKSP--EKEEAKSPAEVKSPEKAKSPAKEEAKSPP 562

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>FA53C_MOUSE (Q8BXQ8) Protein FAM53C|
          Length = 393

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +3

Query: 69  EPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPGDL 206
           EP  S V+ P P  P+P+KLP    PP     S+R  R  S P DL
Sbjct: 89  EPPLSQVLSPEP--PDPEKLPVPPAPP-----SKRHCRSLSVPVDL 127

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>UBQL4_HUMAN (Q9NRR5) Ubiquilin-4 (Ataxin-1 ubiquitin-like-interacting protein|
           A1U)
          Length = 601

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = -1

Query: 198 PGQNTTESSAASPIGTVAAISNGG----AFGDSGDRAREGLLPSFRAQIGLRSAG 46
           P Q +T  SA+S  G+ +  S+GG      G+    A   +L  F   +GL S G
Sbjct: 118 PAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSLG 172

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>TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily member 6 (Fas|
           antigen ligand) (Fas ligand) (CD178 antigen) (CD95L
           protein) (Apoptosis antigen ligand) (APTL) [Contains:
           Tumor necrosis factor ligand superfamily member 6,
           membrane form; Tumor
          Length = 281

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +3

Query: 45  RRPIGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGS 167
           RRP   Q  P      PP P  P P  LP    PPL + G+
Sbjct: 38  RRP--GQRRPPPPPPPPPLPPPPPPPPLPPLPLPPLKKRGN 76

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = +3

Query: 51  PIGAQSEPGSSAVVPPSP-----DLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPGDLRAA 215
           P  A   PGSSA  PP P       P+P  +P  +  P    G+R S    SG G  R  
Sbjct: 224 PGTAGGRPGSSAGGPPRPVPRPGPRPSPMNMPASR--PTPPGGARPSTSSRSGGGRGRGG 281

Query: 216 G 218
           G
Sbjct: 282 G 282

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>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
 Frame = -3

Query: 235 SESIRKP-AALRSPGPEHHRIERRE-----PDRDSGGHFQRG------------SFWGFG 110
           SE+  KP AA R+P     RIERR        RD+ G F  G            S   + 
Sbjct: 245 SEAAPKPRAAARTPAASAGRIERRRARAAVAGRDATGRFTAGQPRRVELDADATSGAFYA 304

Query: 109 RSGEGGTTAE-LPGSDWAPIGR-RFRHFGEPNPGLRAA 2
           R  +G  + E  PG+   P GR  +   G+  PGL  A
Sbjct: 305 RYRDGYVSGEPWPGAGPPPPGRVLYGGLGDSRPGLWGA 342

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>UL13_HCMVA (P16755) Hypothetical protein UL13|
          Length = 473

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 226 IRKPAALRSPGPEHHRIERREPDRD 152
           +R P  LR P  +HH +    P RD
Sbjct: 102 VRSPRPLRPPSSQHHAVSPELPSRD 126

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>TWST1_PONPY (Q8MIB9) Twist-related protein 1|
          Length = 203

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
 Frame = +3

Query: 78  SSAVVPPSPDLPNPQKLPRWKWPPLS-------RSGSRRSIRWCSGPGDLRAAG 218
           SS V P    L N ++ P  + PP         RS SRRS    +GPG   + G
Sbjct: 7   SSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSSRRSAGGGAGPGGAASGG 60

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>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois|
           homeobox protein 3) (Homeodomain protein IRXB1)
          Length = 507

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 92  PSLARSPESPKAPP--LEMAATVPIGLAALDSVVFW 193
           P +AR+P SP +PP  L+  A  P   +AL     W
Sbjct: 318 PPVARAPASPPSPPSSLDPCAPAPAPSSALQKPKIW 353

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>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
 Frame = -1

Query: 204  GPPGQN--TTESSAASPIGTVAAISNGGAFGDSGDRAREG 91
            GPPG N    E     P G        GA G+ GDR   G
Sbjct: 1032 GPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPG 1071

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>HSLV_NITEU (Q82SP7) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 172

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
 Frame = -1

Query: 186 TTESSAASPIGTVAAISNGGAFGDSGDRA---REGLLPSFRAQIGLRSAGDFAILGNQTR 16
           T       P   +AAI +GGA+  +  RA      L P       L  AGD  I  NQ  
Sbjct: 107 TGAGDVIEPEQGIAAIGSGGAYAQAAARALLENTDLSPKEIVTKALTIAGDICIYTNQVH 166

Query: 15  GFELL 1
             E L
Sbjct: 167 VIEQL 171

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>H1_PARAN (P02256) Histone H1, gonadal|
          Length = 248

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 5   SSKPRVWFPKMAKSPADRSPI*ARKLGSSPSLARSPESPKAPPLEMAATVP 157
           + KP    PK AK PA +SP   +K   SP  A+     + P  + A   P
Sbjct: 185 AKKPAKKSPKKAKKPAKKSPK-KKKAKRSPKKAKKAAGKRKPAAKKARRSP 234

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>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 54  IGAQSEPGSSAVVPPSPDLPNPQKLPRWKWPPLSRSGSRRSIRWCSGPG 200
           + +Q +P     +PPS   P  Q+ P  + PP++ SGS    R  SG G
Sbjct: 696 LDSQGDPLPGVPLPPSD--PTRQETPPPRSPPVANSGSTGFSRRGSGRG 742

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>BBC3_HUMAN (Q9BXH1) Bcl-2-binding component 3 (p53 up-regulated modulator of|
           apoptosis) (JFY-1)
          Length = 193

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +2

Query: 92  PSLARSPESPKAPPLEM--AATVPIGLAALDSVVFWPGGPES 211
           P LA +P +P   P     A T P  + A      WPGGP S
Sbjct: 42  PGLAAAPAAPTLLPAAYLCAPTAPPAVTAALGGSRWPGGPRS 83

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>CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)|
           (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase)
           (Homocysteine synthase)
          Length = 429

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 97  GGTTAELPGSDWAPIGRRFRHFGEPNPG 14
           GG   +    DW    +RF  F EP+PG
Sbjct: 220 GGVIVDSGKFDWKKNSKRFPEFNEPHPG 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,411,868
Number of Sequences: 219361
Number of extensions: 1087530
Number of successful extensions: 5706
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 5033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5663
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

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