>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score =  281 bits (142), Expect = 5e-73
 Identities = 186/202 (92%), Gaps = 9/202 (4%)
 Strand = Plus / Plus

                                                                       
Query: 44  gaccgtccctcgcctgcttccttccccgacacgacaggcgaatccaaggtttcgcggcgg 103
           ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 6   gaccgtcgctcgcctgcttccttcaccgacgcgacaggcgaatccaaggtttcgcggcgg 65

                                                                       
Query: 104 ---------tcgcacgcgctggatctgacgcggcagctcccggcggccgtctactactgc 154
                    | ||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 66  ttgcggccctagcacgcgctggatctgacgcggcagctcccggcggccgcgtactactgc 125

                                                                       
Query: 155 ctgctcttcgctgcgtcggcggccgtcctcgggctcctcggcggcgtcgcgcgctatatg 214
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 126 ctgctcttcgctgcgtcggcggctgtcctcgggctcctcggcggcgtcgcgcgctatatg 185

                                 
Query: 215 cttccccggaagcgggagatcg 236
           ||||||||||||||||||||||
Sbjct: 186 cttccccggaagcgggagatcg 207

>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score =  212 bits (107), Expect = 4e-52
 Identities = 127/131 (96%), Gaps = 2/131 (1%)
 Strand = Plus / Plus

                                                                       
Query: 106 gcacgcgctggatctgacgcggcagctcccggcggccgtctactactgcctgctcttcgc 165
           ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||
Sbjct: 174 gcacgcgctggatctgacgcg-cagctcccggcggccgcgtactactgcctgctcttcgc 232

                                                                       
Query: 166 tgcgtcggcggccgtcctcgggctcctcggcggcgtcgcgcgctatatgcttccccggaa 225
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 233 tgcgtcggcggccgtcctcgggctcctcggc-gcgtcgcgcgctatatgcttccccggaa 291

                      
Query: 226 gcgggagatcg 236
           |||||||||||
Sbjct: 292 gcgggagatcg 302



 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 65/73 (89%), Gaps = 5/73 (6%)
 Strand = Plus / Plus

                                                                      
Query: 22 cccatcccagaaaccctagacggaccgtccctcgcctgctt-ccttccccgacacgacag 80
          |||| ||||||||||||||||    |||| ||||||||||| ||||||||||| ||||||
Sbjct: 8  cccagcccagaaaccctagac----cgtcgctcgcctgctttccttccccgacgcgacag 63

                       
Query: 81 gcgaatccaaggt 93
          |||||||||||||
Sbjct: 64 gcgaatccaaggt 76

>gb|AY597048.1| Oncorhynchus mykiss macrophage myristoylated alanine-rich C
           kinase-like protein mRNA, complete cds
          Length = 1307

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 181 cctcgggctcctcggcggcgtc 202
           ||||||||||||||||||||||
Sbjct: 389 cctcgggctcctcggcggcgtc 368

>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster
          Length = 84985

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 178  cgtcctcgggctcctcggcggc 199
            ||||||||||||||||||||||
Sbjct: 8332 cgtcctcgggctcctcggcggc 8353

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 177     ccgtcctcgggctcctcggcggcgtc 202
               |||||||||||| |||||||||||||
Sbjct: 4787528 ccgtcctcgggcgcctcggcggcgtc 4787503

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 317350 ctggatctgacgcggcagctc 317330

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 300382 ctggatctgacgcggcagctc 300362

>gb|AF202898.1|AF202898 Streptomyces coelicolor A3(2) type I polyketide synthase gene,
            partial cds
          Length = 2203

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 176  gccgtcctcgggctcctcggc 196
            |||||||||||||||||||||
Sbjct: 1431 gccgtcctcgggctcctcggc 1411

>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
           insert sequence
          Length = 3724

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 ctggatctgacgcggcagctc 133
           |||||||||||||||||||||
Sbjct: 225 ctggatctgacgcggcagctc 245

>gb|DQ333391.1| Cervid herpesvirus 2 glycoprotein C gene, complete cds
          Length = 1522

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 184  cgggctcctcggcggcgtcgcgcgc 208
            |||||||||||||| ||||||||||
Sbjct: 1188 cgggctcctcggcgccgtcgcgcgc 1164

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 300382 ctggatctgacgcggcagctc 300362

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    ctggatctgacgcggcagctc 133
              |||||||||||||||||||||
Sbjct: 317350 ctggatctgacgcggcagctc 317330

>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  ctggatctgacgcggcagctc 133
            |||||||||||||||||||||
Sbjct: 4611 ctggatctgacgcggcagctc 4631

>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   ctggatctgacgcggcagctc 133
             |||||||||||||||||||||
Sbjct: 50401 ctggatctgacgcggcagctc 50381

>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 113  ctggatctgacgcggcagctc 133
            |||||||||||||||||||||
Sbjct: 7700 ctggatctgacgcggcagctc 7680

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      caaggtttcgcggcggtcgc 107
               ||||||||||||||||||||
Sbjct: 1950645 caaggtttcgcggcggtcgc 1950626

>gb|AY657515.1| Synthetic construct Peudomonas aeruginosa clone FLH040573.01F
           PA1340 gene, partial cds
          Length = 669

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 179 gtcctcgggctcctcggcggcgtcgcgc 206
           ||||||||  ||||||||||||||||||
Sbjct: 76  gtcctcggcgtcctcggcggcgtcgcgc 103

>ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA
          Length = 12715

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tctactactgcctgctcttc 163
             ||||||||||||||||||||
Sbjct: 11976 tctactactgcctgctcttc 11995

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      caaggtttcgcggcggtcgc 107
               ||||||||||||||||||||
Sbjct: 1480472 caaggtttcgcggcggtcgc 1480491

>gb|AC154402.2| Mus musculus BAC clone RP24-235N24 from chromosome 13, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     cctccagtcccatcccagaa 33
              ||||||||||||||||||||
Sbjct: 106545 cctccagtcccatcccagaa 106564

>gb|DQ352994.1| Apomyrma stygia voucher RA0120 abdominal-A (AbdA) gene, partial cds
          Length = 531

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 ggctcctcggcggcgtcgcgcgct 209
           |||||||||||||||||| |||||
Sbjct: 358 ggctcctcggcggcgtcgagcgct 381

>gb|DQ352869.1| Pachycondyla stigma voucher RA0243 abdominal-A (AbdA) gene, partial
           cds
          Length = 648

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 ggctcctcggcggcgtcgcgcgct 209
           |||||||||||||||||| |||||
Sbjct: 361 ggctcctcggcggcgtcgagcgct 384

>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence
          Length = 155807

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tctactactgcctgctcttc 163
             ||||||||||||||||||||
Sbjct: 39017 tctactactgcctgctcttc 39036

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      caaggtttcgcggcggtcgc 107
               ||||||||||||||||||||
Sbjct: 1367581 caaggtttcgcggcggtcgc 1367600

>dbj|AK094080.1| Homo sapiens cDNA FLJ36761 fis, clone UTERU2018884
          Length = 3017

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  tctactactgcctgctcttc 163
            ||||||||||||||||||||
Sbjct: 2296 tctactactgcctgctcttc 2315

>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence
          Length = 186783

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   tctactactgcctgctcttc 163
             ||||||||||||||||||||
Sbjct: 17512 tctactactgcctgctcttc 17493

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    gccgtcctcgggctcctcgg 195
              ||||||||||||||||||||
Sbjct: 474763 gccgtcctcgggctcctcgg 474744

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gacggaccgtccctcgcctg 59
             ||||||||||||||||||||
Sbjct: 86184 gacggaccgtccctcgcctg 86203

>gb|AE004563.1| Pseudomonas aeruginosa PAO1, section 124 of 529 of the complete
            genome
          Length = 9937

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 179  gtcctcgggctcctcggcggcgtcgcgc 206
            ||||||||  ||||||||||||||||||
Sbjct: 7753 gtcctcggcgtcctcggcggcgtcgcgc 7726

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     cggcagctcccggcggccgt 144
               ||||||||||||||||||||
Sbjct: 2129561 cggcagctcccggcggccgt 2129542

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 182     ctcgggctcctcggcggcgtcgcg 205
               |||||||| |||||||||||||||
Sbjct: 2637365 ctcgggctgctcggcggcgtcgcg 2637388

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 167     gcgtcggcggccgtcctcgggctc 190
               |||||||||||| |||||||||||
Sbjct: 1756399 gcgtcggcggccatcctcgggctc 1756422

>emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chromosome 13, complete
             sequence
          Length = 229171

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    cctccagtcccatcccagaa 33
             ||||||||||||||||||||
Sbjct: 58389 cctccagtcccatcccagaa 58370

>dbj|D45381.1| Carassius auratus mRNA for AMPA-type glutamate receptor, partial cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  gccgtcctcgggctcctcgg 195
            ||||||||||||||||||||
Sbjct: 1731 gccgtcctcgggctcctcgg 1712

>gb|U12018.1|CAU12018 Carassius auratus glutamate receptor 4 (glur4) mRNA, partial cds
          Length = 3613

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  gccgtcctcgggctcctcgg 195
            ||||||||||||||||||||
Sbjct: 1731 gccgtcctcgggctcctcgg 1712

>dbj|AB028740.1| Mus musculus drba gene for drebrin A, partial cds
          Length = 20387

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    cctccagtcccatcccagaa 33
             ||||||||||||||||||||
Sbjct: 20315 cctccagtcccatcccagaa 20296


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,257,058
Number of Sequences: 3902068
Number of extensions: 1257058
Number of successful extensions: 28908
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27979
Number of HSP's gapped (non-prelim): 925
length of query: 236
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 214
effective length of database: 17,147,199,772
effective search space: 3669500751208
effective search space used: 3669500751208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)