ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl12a01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478288.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 ggcgccgccgccggcgcagcgccctc 193 |||| ||||||||||||||||||||| Sbjct: 305 ggcggcgccgccggcgcagcgccctc 280
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 ggcgccgccgccggcgcagcgccctc 193 |||| ||||||||||||||||||||| Sbjct: 19015035 ggcggcgccgccggcgcagcgccctc 19015010
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gccggagacgaggagcaggagg 159 |||||||||||||||||||||| Sbjct: 4968090 gccggagacgaggagcaggagg 4968069 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 cgagggaggcgccgccgccgg 181 ||||||||||||||||||||| Sbjct: 7562007 cgagggaggcgccgccgccgg 7561987
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 ggcgccgccgccggcgcagcgccctc 193 |||| ||||||||||||||||||||| Sbjct: 117020 ggcggcgccgccggcgcagcgccctc 116995
>ref|NM_196537.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053G13.11), mRNA Length = 645 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgcagcgc 189 |||||||||||||||| |||||||| Sbjct: 29 ggaggcgccgccgccgacgcagcgc 53
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 cgagggaggcgccgccgccgg 181 ||||||||||||||||||||| Sbjct: 259897 cgagggaggcgccgccgccgg 259917
>ref|XM_683633.1| PREDICTED: Danio rerio hypothetical protein LOC553397 (LOC553397), mRNA Length = 759 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gaggagcaggagggcgaggga 167 ||||||||||||||||||||| Sbjct: 89 gaggagcaggagggcgaggga 109
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggaggcgccgccgccggcgcagcgc 189 |||||||||||||||| |||||||| Sbjct: 14325054 ggaggcgccgccgccgacgcagcgc 14325030 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cgccctcggctcacgcgcgccgga 210 |||||||||||| ||||||||||| Sbjct: 4451334 cgccctcggctcccgcgcgccgga 4451357
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggaggcgccgccgccggcgcagcgc 189 |||||||||||||||| |||||||| Sbjct: 72329 ggaggcgccgccgccgacgcagcgc 72305
>dbj|AK066224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G10, full insert sequence Length = 4304 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgcagcgc 189 |||||||||||||||| |||||||| Sbjct: 124 ggaggcgccgccgccgacgcagcgc 148
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggaggcgccgccgccggcgcagcgc 189 |||||||||||||||| |||||||| Sbjct: 14333296 ggaggcgccgccgccgacgcagcgc 14333272 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cgccctcggctcacgcgcgccgga 210 |||||||||||| ||||||||||| Sbjct: 4452155 cgccctcggctcccgcgcgccgga 4452178
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgaggagcaggagggcgagg 165 |||||||||||||||||||| Sbjct: 216518 cgaggagcaggagggcgagg 216499
>ref|NM_185091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ggcgccgccgccggcgcagcgccc 191 ||||||||||||| |||||||||| Sbjct: 475 ggcgccgccgccgccgcagcgccc 498
>ref|NM_195062.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0081F12.23), mRNA Length = 357 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cgccctcggctcacgcgcgccgga 210 |||||||||||| ||||||||||| Sbjct: 108 cgccctcggctcccgcgcgccgga 131
>ref|NM_191109.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 158 gggcgagggaggcgccgccgccggcgcagcgc 189 |||| |||||||||||||||||| ||| |||| Sbjct: 658 gggcaagggaggcgccgccgccgccgccgcgc 627
>ref|XM_472770.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 24 cccgccgtccgtcgccgccg 5
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 caggagggcgagggaggcgc 172 |||||||||||||||||||| Sbjct: 976117 caggagggcgagggaggcgc 976136
>gb|BC079069.1| Rattus norvegicus integrin, beta 6, mRNA (cDNA clone MGC:94023 IMAGE:7121642), complete cds Length = 2818 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 agggatgcgtgtgcatcgga 410 |||||||||||||||||||| Sbjct: 1804 agggatgcgtgtgcatcgga 1823
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 150 gagcaggagggcgagggaggcgccgccg 177 ||||| ||||||||||| |||||||||| Sbjct: 1423032 gagcacgagggcgagggcggcgccgccg 1423005
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 40.1 bits (20), Expect = 6.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 170 cgccgccgccggcgcag-cgccctcggc 196 ||||||||||||||||| |||||||||| Sbjct: 53542 cgccgccgccggcgcagtcgccctcggc 53569
>gb|AC147557.4| Mus musculus BAC clone RP23-452M8 from chromosome 14, complete sequence Length = 174133 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 acaaaacaatgttatgcaattaaa 320 |||||||||||||| ||||||||| Sbjct: 5678 acaaaacaatgttaagcaattaaa 5701
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgtccgtcgccgccgg 92 |||||||||||||||||||| Sbjct: 473385 ccgccgtccgtcgccgccgg 473404
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ggcgccgccgccggcgcagcgccc 191 ||||||||||||| |||||||||| Sbjct: 34579972 ggcgccgccgccgccgcagcgccc 34579949 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 9332321 ggaggcgccgccgccggcgc 9332302 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 6992638 gcgccgccgccggcgcagcg 6992657
>ref|XM_842690.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0760) partial mRNA Length = 1797 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgtccgtcgccgccgg 92 |||||||||||||||||||| Sbjct: 862 ccgccgtccgtcgccgccgg 881
>emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23 on chromosome 3, complete sequence Length = 129215 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tacaaaacaatgttatgcaa 315 |||||||||||||||||||| Sbjct: 80592 tacaaaacaatgttatgcaa 80611
>ref|XM_572267.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH00750) partial mRNA Length = 2346 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 caggagggcgagggaggcgc 172 |||||||||||||||||||| Sbjct: 1425 caggagggcgagggaggcgc 1444
>gb|AC116319.4| Mus musculus BAC clone RP23-265J2 from chromosome 14, complete sequence Length = 170494 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 acaaaacaatgttatgcaattaaa 320 |||||||||||||| ||||||||| Sbjct: 68886 acaaaacaatgttaagcaattaaa 68863
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 130145 gcgccgccgccggcgcagcg 130126
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 122235 ggaggcgccgccgccggcgc 122254
>gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0050G15, complete sequence Length = 152556 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 8142 ggaggcgccgccgccggcgc 8161
>gb|BT009335.1| Triticum aestivum clone wlm4.pk0009.a8:fis, full insert mRNA sequence Length = 1660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tcaagaccacattccagaat 282 |||||||||||||||||||| Sbjct: 193 tcaagaccacattccagaat 212
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ggcgccgccgccggcgcagcgccc 191 ||||||||||||| |||||||||| Sbjct: 37689 ggcgccgccgccgccgcagcgccc 37666
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 107971 cccgccgtccgtcgccgccg 107990
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 ccatgccgccggagacgaggagca 154 |||||||||||||| ||||||||| Sbjct: 150282 ccatgccgccggaggcgaggagca 150305
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 1968 cccgccgtccgtcgccgccg 1987
>gb|AF425990.1| Streptomyces coelicolor A3(2) putative oxidoreductase (ecaD1) gene, complete cds; and putative transport integral membrane protein (ecaD2) gene, partial cds Length = 2558 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 ccatgccgccggagacgaggagca 154 |||||||||||||| ||||||||| Sbjct: 2335 ccatgccgccggaggcgaggagca 2312
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 89727 gcgccgccgccggcgcagcg 89708
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aggcgccgccgccggcgcag 186 |||||||||||||||||||| Sbjct: 4301507 aggcgccgccgccggcgcag 4301488
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cgccctcggctcacgcgcgccgga 210 |||||||||||| ||||||||||| Sbjct: 112942 cgccctcggctcccgcgcgccgga 112965
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 29721 ggaggcgccgccgccggcgc 29702
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 23111631 cccgccgtccgtcgccgccg 23111650
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 6066152 ggaggcgccgccgccggcgc 6066171
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ggcgccgccgccggcgcagc 187 |||||||||||||||||||| Sbjct: 26312683 ggcgccgccgccggcgcagc 26312702
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ggcgccgccgccggcgcagcgccc 191 ||||||||||||| |||||||||| Sbjct: 34670044 ggcgccgccgccgccgcagcgccc 34670021 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 9330216 ggaggcgccgccgccggcgc 9330197 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 6990533 gcgccgccgccggcgcagcg 6990552
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 158 gggcgagggaggcgccgccgccggcgcagcgc 189 |||| |||||||||||||||||| ||| |||| Sbjct: 34940541 gggcaagggaggcgccgccgccgccgccgcgc 34940510
>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence Length = 176075 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ccgtcgccgccgggagagcg 99 |||||||||||||||||||| Sbjct: 79922 ccgtcgccgccgggagagcg 79903
>ref|NM_001004263.1| Rattus norvegicus integrin, beta 6 (Itgb6), mRNA Length = 2818 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 agggatgcgtgtgcatcgga 410 |||||||||||||||||||| Sbjct: 1804 agggatgcgtgtgcatcgga 1823
>gb|AE004479.1| Pseudomonas aeruginosa PAO1, section 40 of 529 of the complete genome Length = 13987 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gaggcgccgccgccggcgca 185 |||||||||||||||||||| Sbjct: 8225 gaggcgccgccgccggcgca 8244
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ggcgccgccgccggcgcagcgccc 191 ||||||||||||| |||||||||| Sbjct: 63361 ggcgccgccgccgccgcagcgccc 63384
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 2117924 ggaggcgccgccgccggcgc 2117943
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 159235 gcgccgccgccggcgcagcg 159254
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 23870 ggaggcgccgccgccggcgc 23889
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 158 gggcgagggaggcgccgccgccggcgcagcgc 189 |||| |||||||||||||||||| ||| |||| Sbjct: 69905 gggcaagggaggcgccgccgccgccgccgcgc 69874
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ggcgccgccgccggcgcagc 187 |||||||||||||||||||| Sbjct: 10410 ggcgccgccgccggcgcagc 10429
>dbj|AK121907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105N05, full insert sequence Length = 1076 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cgccctcggctcacgcgcgccgga 210 |||||||||||| ||||||||||| Sbjct: 156 cgccctcggctcccgcgcgccgga 179
>dbj|AK119417.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-G06, full insert sequence Length = 3219 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 2840 cccgccgtccgtcgccgccg 2859
>dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C08, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 198 gcgccgccgccggcgcagcg 217
>dbj|AK072267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I18, full insert sequence Length = 1822 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 529 ggaggcgccgccgccggcgc 548
>dbj|AK071173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082F07, full insert sequence Length = 828 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ggcgccgccgccggcgcagcgccc 191 ||||||||||||| |||||||||| Sbjct: 488 ggcgccgccgccgccgcagcgccc 511
>dbj|AK064921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N08, full insert sequence Length = 2413 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 158 gggcgagggaggcgccgccgccggcgcagcgc 189 |||| |||||||||||||||||| ||| |||| Sbjct: 667 gggcaagggaggcgccgccgccgccgccgcgc 636
>dbj|AK059730.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F09, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 127 cccgccgtccgtcgccgccg 108
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cccgccgtccgtcgccgccg 91 |||||||||||||||||||| Sbjct: 32551 cccgccgtccgtcgccgccg 32570
>dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bmlap, Bmprojectin, Bmkettin, Bmtitin1 genes, partial and complete cds Length = 160000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cgccgccgccggcgcagcgc 189 |||||||||||||||||||| Sbjct: 93583 cgccgccgccggcgcagcgc 93602
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cgccgccgccggcgcagcgc 189 |||||||||||||||||||| Sbjct: 1174839 cgccgccgccggcgcagcgc 1174820
>gb|DQ235693.1| Acinetobacter baumannii MexA-like protein (mexA) gene, complete sequence Length = 1175 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gaggcgccgccgccggcgca 185 |||||||||||||||||||| Sbjct: 82 gaggcgccgccgccggcgca 101
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcgccgccgccggcgcagcg 188 |||||||||||||||||||| Sbjct: 1771544 gcgccgccgccggcgcagcg 1771563
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ggaggcgccgccgccggcgc 184 |||||||||||||||||||| Sbjct: 6132619 ggaggcgccgccgccggcgc 6132638
>gb|L11616.1|PSEENVCD Pseudomonas aeruginosa mexA and mexB genes, complete cds and outer membrane protein (oprM) gene, partial cds Length = 5600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gaggcgccgccgccggcgca 185 |||||||||||||||||||| Sbjct: 484 gaggcgccgccgccggcgca 503 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,168,177 Number of Sequences: 3902068 Number of extensions: 3168177 Number of successful extensions: 86371 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83864 Number of HSP's gapped (non-prelim): 2508 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
