>RT23_SCHPO (Q9UR07) Retrotransposable element Tf2 155 kDa protein type 3|
          Length = 1333

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 327  ISRYHSLVLTRSRPHPPQSHCLPVPKNETPWLLLLVNYL 211
            +   H+  + +SR H P     P+P +E PW  L ++++
Sbjct: 954  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 992

>RT22_SCHPO (Q9C0R2) Retrotransposable element Tf2 155 kDa protein type 2|
          Length = 1333

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 327  ISRYHSLVLTRSRPHPPQSHCLPVPKNETPWLLLLVNYL 211
            +   H+  + +SR H P     P+P +E PW  L ++++
Sbjct: 954  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 992

>RT21_SCHPO (Q05654) Retrotransposable element Tf2 155 kDa protein type 1|
          Length = 1333

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 327  ISRYHSLVLTRSRPHPPQSHCLPVPKNETPWLLLLVNYL 211
            +   H+  + +SR H P     P+P +E PW  L ++++
Sbjct: 954  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 992

>MCM7_XENLA (Q91876) DNA replication licensing factor MCM7 (CDC47 homolog)|
           (x.MCM7)
          Length = 720

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +3

Query: 141 NSPFSAGSEPHPLHGRDSSLKTVEGNLQAAAAMASRF 251
           N+  S  +  +P +GR +  KTVE N+Q  AA+ SRF
Sbjct: 478 NARCSILAAANPAYGRYNPKKTVEQNIQLPAALLSRF 514

>HEMA_CVMA5 (P31615) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3|
           glycoprotein)
          Length = 428

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -1

Query: 253 QKRDAMAAAACKLPSTVFKLESRPWSG*GSDPAENGE 143
           ++ D M AAAC+LP   F+  S  +SG G+  A +G+
Sbjct: 309 RQSDNMTAAACQLPYCFFRNTSANYSG-GTHDAHHGD 344

>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 321 RYHSLVLTRSRPHPPQSHCLPVPKNETPWLLLL 223
           R H L + + R  P  S   P P+ + PW+ L+
Sbjct: 343 RLHELPVPKPRGTPKPSEGTPAPRKDPPWITLV 375

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 24.3 bits (51), Expect(2) = 7.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 82  HPRPLSAAERAAAPVYSAAPILRSP 156
           HP P + A+    P+YS +P ++ P
Sbjct: 177 HPPPPTYAQPPPTPIYSPSPQVQPP 201



 Score = 21.9 bits (45), Expect(2) = 7.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 57  TPPVPQHPPS 86
           TPP  QHPPS
Sbjct: 156 TPPRGQHPPS 165

>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1776

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 10/32 (31%)
 Frame = -2

Query: 315 HSLVLTRSRPHPPQS----------HCLPVPK 250
           HSL++TR  PH P S          +CLP+P+
Sbjct: 243 HSLLITRGLPHLPSSEKQQVSFHIPNCLPLPE 274

>YO092_YEAST (Q12010) Uncharacterized protein YOL092W|
          Length = 308

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 327 ISRYHSLVLTRSRPHPPQSHCLPVPKNETPWLLLLVNYL 211
           IS Y +  +  ++P P +   LPVP+ +  W+  +  YL
Sbjct: 180 ISWYVTYCVNYTQPPPVEDPSLPVPELQINWMAQIFGYL 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,531,361
Number of Sequences: 219361
Number of extensions: 604276
Number of successful extensions: 1991
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1990
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)