ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550374.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3103 Score = 456 bits (230), Expect = e-125 Identities = 311/338 (92%) Strand = Plus / Plus Query: 86 cgaagatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatca 145 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 255 cgaagatgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatca 314 Query: 146 cggcgcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcg 205 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 315 cggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcg 374 Query: 206 tcgcgcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagc 265 ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 375 tcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagc 434 Query: 266 tcgccgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctccctcgcgg 325 |||| |||||||| |||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct: 435 tcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctcgctcgcgg 494 Query: 326 ccaggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgatta 385 | |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 495 cgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggagacgatta 554 Query: 386 aggacatgtacctgcactacaacgagagatctgggctg 423 |||||||||| || | ||||||||||||||||||| Sbjct: 555 aggacatgtatggacatttcaacgagagatctgggctg 592
>dbj|AK068858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169B12, full insert sequence Length = 3104 Score = 456 bits (230), Expect = e-125 Identities = 311/338 (92%) Strand = Plus / Plus Query: 86 cgaagatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatca 145 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 255 cgaagatgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatca 314 Query: 146 cggcgcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcg 205 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 315 cggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcg 374 Query: 206 tcgcgcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagc 265 ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 375 tcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagc 434 Query: 266 tcgccgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctccctcgcgg 325 |||| |||||||| |||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct: 435 tcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctcgctcgcgg 494 Query: 326 ccaggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgatta 385 | |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 495 cgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggagacgatta 554 Query: 386 aggacatgtacctgcactacaacgagagatctgggctg 423 |||||||||| || | ||||||||||||||||||| Sbjct: 555 aggacatgtatggacatttcaacgagagatctgggctg 592
>ref|XM_468281.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2433 Score = 375 bits (189), Expect = e-101 Identities = 312/353 (88%) Strand = Plus / Plus Query: 91 atgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatcacggcg 150 |||||||| |||||||| || |||||| |||| |||| ||||||||||||||||| ||| Sbjct: 1 atgtacgtggtgaagcgcgatgggcggcaggaggcggtccacttcgacaagatcaccgcg 60 Query: 151 cggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcgtcgcg 210 |||||||||| |||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 61 cggctcaagaggctcagctacggcctcagccaggagcactgcgatccggtcctcgtcgcg 120 Query: 211 cagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagctcgcc 270 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 cagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcggcgagctcgcg 180 Query: 271 gccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctccctcgcggccagg 330 || |||||||||||||| | |||||||||||||||||||| ||||| ||||| || ||| Sbjct: 181 gcggagaccgccgccgccatgaccgcctcccaccccgactacgcctcgctcgccgcgagg 240 Query: 331 attgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaaggac 390 || || | || ||||||||||||| ||||| |||||| ||||| |||||||| |||| | Sbjct: 241 atcgcgatctcgaacctgcacaagaccaccatgaagtctttctcagagacgataaaggtc 300 Query: 391 atgtacctgcactacaacgagagatctgggctgctgtctccgctgattgccga 443 |||||| |||| ||| | ||| ||||||||||| || |||| ||||||||||| Sbjct: 301 atgtacatgcattacgatgagcgatctgggctgttggctcctctgattgccga 353
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 333 bits (168), Expect = 3e-88 Identities = 216/232 (93%) Strand = Plus / Minus Query: 86 cgaagatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatca 145 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3453486 cgaagatgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatca 3453427 Query: 146 cggcgcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcg 205 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3453426 cggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcg 3453367 Query: 206 tcgcgcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagc 265 ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 3453366 tcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagc 3453307 Query: 266 tcgccgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctc 317 |||| |||||||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 3453306 tcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctc 3453255 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 319 ctcgcggccaggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgag 378 |||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 3453160 ctcgcggcgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggag 3453101 Query: 379 acg 381 ||| Sbjct: 3453100 acg 3453098 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 8194678 tcgccgccgagaccgccgccgccctcgccgcc 8194647 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 28005470 ccggcggcggcggcggaagg 28005451 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 8901833 ccggcggcggcggcggaagg 8901814
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 333 bits (168), Expect = 3e-88 Identities = 216/232 (93%) Strand = Plus / Minus Query: 86 cgaagatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatca 145 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 70190 cgaagatgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatca 70131 Query: 146 cggcgcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcg 205 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 70130 cggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcg 70071 Query: 206 tcgcgcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagc 265 ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 70070 tcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagc 70011 Query: 266 tcgccgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctc 317 |||| |||||||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 70010 tcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctc 69959 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 319 ctcgcggccaggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgag 378 |||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 69864 ctcgcggcgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggag 69805 Query: 379 acg 381 ||| Sbjct: 69804 acg 69802
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 333 bits (168), Expect = 3e-88 Identities = 216/232 (93%) Strand = Plus / Minus Query: 86 cgaagatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatca 145 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 145040 cgaagatgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatca 144981 Query: 146 cggcgcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcg 205 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144980 cggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcg 144921 Query: 206 tcgcgcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagc 265 ||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 144920 tcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagc 144861 Query: 266 tcgccgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctc 317 |||| |||||||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 144860 tcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctc 144809 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 319 ctcgcggccaggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgag 378 |||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 144714 ctcgcggcgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggag 144655 Query: 379 acg 381 ||| Sbjct: 144654 acg 144652
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 301 bits (152), Expect = 1e-78 Identities = 209/228 (91%) Strand = Plus / Plus Query: 90 gatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatcacggc 149 ||||||||| |||||||| || |||||| |||| |||| ||||||||||||||||| || Sbjct: 34346893 gatgtacgtggtgaagcgcgatgggcggcaggaggcggtccacttcgacaagatcaccgc 34346952 Query: 150 gcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcgtcgc 209 ||||||||||| |||||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 34346953 gcggctcaagaggctcagctacggcctcagccaggagcactgcgatccggtcctcgtcgc 34347012 Query: 210 gcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagctcgc 269 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 34347013 gcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcggcgagctcgc 34347072 Query: 270 cgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctc 317 || |||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 34347073 ggcggagaccgccgccgccatgaccgcctcccaccccgactacgcctc 34347120 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 30592800 tcgccgccgagaccgccgccgccctcgccgcc 30592831 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 1237723 tcgccggcgagaccgccgccgcgctcgccgcc 1237754 Score = 46.1 bits (23), Expect = 0.097 Identities = 50/59 (84%) Strand = Plus / Plus Query: 385 aaggacatgtacctgcactacaacgagagatctgggctgctgtctccgctgattgccga 443 |||| ||||||| |||| ||| | ||| ||||||||||| || |||| ||||||||||| Sbjct: 34347377 aaggtcatgtacatgcattacgatgagcgatctgggctgttggctcctctgattgccga 34347435 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 343 aacctgcacaagaacaccaagaagtccttctccgagacg 381 ||||||||||||| ||||| |||||| ||||| |||||| Sbjct: 34347246 aacctgcacaagaccaccatgaagtctttctcagagacg 34347284 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 32981191 gccgccgagaccgccgccgccatgaccgcctcc 32981223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 accgccgccgcgctcaccgcc 297 ||||||||||||||||||||| Sbjct: 23905383 accgccgccgcgctcaccgcc 23905363 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 8880526 caccccggcggcggcggcgg 8880545 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 1446122 cggcggcggcggcggaaggc 1446103
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 301 bits (152), Expect = 1e-78 Identities = 209/228 (91%) Strand = Plus / Plus Query: 90 gatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatcacggc 149 ||||||||| |||||||| || |||||| |||| |||| ||||||||||||||||| || Sbjct: 44540 gatgtacgtggtgaagcgcgatgggcggcaggaggcggtccacttcgacaagatcaccgc 44599 Query: 150 gcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcgtcgc 209 ||||||||||| |||||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 44600 gcggctcaagaggctcagctacggcctcagccaggagcactgcgatccggtcctcgtcgc 44659 Query: 210 gcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagctcgc 269 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 44660 gcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcggcgagctcgc 44719 Query: 270 cgccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctc 317 || |||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 44720 ggcggagaccgccgccgccatgaccgcctcccaccccgactacgcctc 44767 Score = 46.1 bits (23), Expect = 0.097 Identities = 50/59 (84%) Strand = Plus / Plus Query: 385 aaggacatgtacctgcactacaacgagagatctgggctgctgtctccgctgattgccga 443 |||| ||||||| |||| ||| | ||| ||||||||||| || |||| ||||||||||| Sbjct: 45024 aaggtcatgtacatgcattacgatgagcgatctgggctgttggctcctctgattgccga 45082 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 343 aacctgcacaagaacaccaagaagtccttctccgagacg 381 ||||||||||||| ||||| |||||| ||||| |||||| Sbjct: 44893 aacctgcacaagaccaccatgaagtctttctcagagacg 44931
>gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence Length = 73268 Score = 264 bits (133), Expect = 2e-67 Identities = 202/225 (89%) Strand = Plus / Minus Query: 90 gatgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatcacggc 149 ||||||||| |||||||||||||| ||| | ||| | || |||||||||||||||||||| Sbjct: 14694 gatgtacgtagtgaagcgggacggacggcccgaggccgtccacttcgacaagatcacggc 14635 Query: 150 gcggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcgtcgc 209 |||||| |||||||| || || ||||||| |||||||||||||||||||||||||||||| Sbjct: 14634 gcggcttaagaagctgagttatgggctcacccaggagcactgcgacccggtgctcgtcgc 14575 Query: 210 gcagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagctcgc 269 |||||||| || ||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 14574 ccagaaggtgtgtgccggcgtctataagggcgtcaccaccagccagctcgatgagctcgc 14515 Query: 270 cgccgagaccgccgccgcgctcaccgcctcccaccccgactatgc 314 |||||||||||||||||| | |||||| |||||||||||||| Sbjct: 14514 cgccgagaccgccgccgccatgaccgccaatcaccccgactatgc 14470 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 347 tgcacaagaacaccaagaagtccttctccga 377 |||| |||||||| ||||||||||||||||| Sbjct: 14348 tgcataagaacacaaagaagtccttctccga 14318
>gb|AF118785.1| Glycine max ribonucleotide reductase large subunit B mRNA, complete cds Length = 2649 Score = 147 bits (74), Expect = 4e-32 Identities = 248/306 (81%) Strand = Plus / Plus Query: 91 atgtacgtcgtgaagcgggacgggcggacggagacggtgcacttcgacaagatcacggcg 150 ||||| ||||| ||| || |||||||| |||||||| ||||||||||| || || ||| Sbjct: 33 atgtatgtcgtaaagaggaacgggcggcaagagacggttcacttcgacaaaataaccgcg 92 Query: 151 cggctcaagaagctcagctacgggctcagccaggagcactgcgacccggtgctcgtcgcg 210 || ||||||||||| || || || |||||| || ||||||||| | || | ||||| Sbjct: 93 cgcctcaagaagcttagttatggcctcagctccgatcactgcgacgccgttttggtcgct 152 Query: 211 cagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagctcgcc 270 ||||| |||||||||||||| ||||| ||||||||||||||||| || ||||| | ||| Sbjct: 153 cagaaagtctgcgccggcgtttacaaaggcgtcaccaccagccaacttgacgaattggcc 212 Query: 271 gccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctccctcgcggccagg 330 ||||| || || ||||| | |||||| ||| |||||||| || | | | || || ||| Sbjct: 213 gccgaaactgctgccgccatgaccgccaaccatcccgactacgcttgcttggctgctagg 272 Query: 331 attgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaaggac 390 |||||||| || || ||||||||||||||||||||||| ||||| |||||||| ||| | Sbjct: 273 attgccgtttcgaatctgcacaagaacaccaagaagtcgttctcggagacgatcaagatc 332 Query: 391 atgtac 396 |||||| Sbjct: 333 atgtac 338
>dbj|AB167473.1| Chlamydomonas reinhardtii NSG5 mRNA for NSG5 protein, complete cds Length = 3594 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 229 gtctacaagggcgtcaccaccagccagctcgacgagctcgccgccgagaccgccgccgcg 288 ||||||||||| ||||||||| |||| || ||||| || || |||||||| |||||| Sbjct: 385 gtctacaagggtgtcaccacctctgagctggatgagctggctgctgagaccgctgccgcg 444 Query: 289 ctcaccgcctcccaccccgactatgcctccctcgcggccaggattgccgtgtccaacctg 348 |||||| || |||||||||| |||||| ||||||||| | || || |||||||||||| Sbjct: 445 ctcacctccacccaccccgattatgccatcctcgcggcgcgtatcgctgtgtccaacctg 504 Query: 349 cacaagaacaccaagaagtc 368 |||||||||||| ||||||| Sbjct: 505 cacaagaacaccgagaagtc 524
>gb|AF118784.1| Glycine max ribonucleotide reductase large subunit A mRNA, complete cds Length = 3061 Score = 91.7 bits (46), Expect = 2e-15 Identities = 145/178 (81%) Strand = Plus / Plus Query: 211 cagaaggtctgcgccggcgtctacaagggcgtcaccaccagccagctcgacgagctcgcc 270 ||||| || ||||| ||||||||||| ||||||||||| ||||||||||| ||| | || Sbjct: 408 cagaaagtgtgcgctggcgtctacaaaggcgtcaccactagccagctcgatgagttggcg 467 Query: 271 gccgagaccgccgccgcgctcaccgcctcccaccccgactatgcctccctcgcggccagg 330 || || |||||||| || | |||||| |||||| |||||||| || | || || ||| Sbjct: 468 gcggaaaccgccgcggctatgaccgccaaccaccctgactatgcttctttggctgcgagg 527 Query: 331 attgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaagg 388 |||||||| || || ||||||||||| || |||||||| || || || |||||||||| Sbjct: 528 attgccgtttcaaatctgcacaagaatacgaagaagtcattttctgaaacgattaagg 585
>emb|Y10862.1|NTRRR12 N.tabacum mRNA for ribonucleotide reductase, clone R1-2 Length = 2840 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaag 387 |||||||| || ||||| |||||||||||||| ||||| || || || |||||| ||||| Sbjct: 420 aggattgctgtttccaatctgcacaagaacacaaagaaatcattttctgagacggttaag 479 Query: 388 gacatgtac 396 ||||||||| Sbjct: 480 gacatgtac 488
>ref|XM_322796.1| Neurospora crassa OR74A ribonucleoside-diphosphate reductase large chain (un-24gene) [MIPS] (NCU03539.1) partial mRNA Length = 2790 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 299 cccaccccgactatgcctccctcgcggccaggattgccgtgtccaacctgcacaagaaca 358 ||||||||||||||||| |||||| ||| | || |||||||||||||| |||||| | | Sbjct: 209 cccaccccgactatgccatcctcgccgcccgtatcgccgtgtccaacctccacaagcaga 268 Query: 359 ccaagaag 366 |||||||| Sbjct: 269 ccaagaag 276
>ref|XM_951725.1| Neurospora crassa OR74A ribonucleoside-diphosphate reductase large chain (un-24gene) [MIPS] (NCU03539.1) partial mRNA Length = 2790 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 299 cccaccccgactatgcctccctcgcggccaggattgccgtgtccaacctgcacaagaaca 358 ||||||||||||||||| |||||| ||| | || |||||||||||||| |||||| | | Sbjct: 209 cccaccccgactatgccatcctcgccgcccgtatcgccgtgtccaacctccacaagcaga 268 Query: 359 ccaagaag 366 |||||||| Sbjct: 269 ccaagaag 276
>emb|AL390092.1|NCB2A19 Neurospora crassa DNA linkage group II BAC clone B2A19 Length = 72788 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 299 cccaccccgactatgcctccctcgcggccaggattgccgtgtccaacctgcacaagaaca 358 ||||||||||||||||| |||||| ||| | || |||||||||||||| |||||| | | Sbjct: 9071 cccaccccgactatgccatcctcgccgcccgtatcgccgtgtccaacctccacaagcaga 9012 Query: 359 ccaagaag 366 |||||||| Sbjct: 9011 ccaagaag 9004
>gb|AF171697.1|AF171697 Neurospora crassa ribonucleotide reductase large subunit (un-24) gene, un-24+ allele, complete cds Length = 3104 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 299 cccaccccgactatgcctccctcgcggccaggattgccgtgtccaacctgcacaagaaca 358 ||||||||||||||||| |||||| ||| | || |||||||||||||| |||||| | | Sbjct: 452 cccaccccgactatgccatcctcgccgcccgtatcgccgtgtccaacctccacaagcaga 511 Query: 359 ccaagaag 366 |||||||| Sbjct: 512 ccaagaag 519
>ref|NM_127748.2| Arabidopsis thaliana R1; ribonucleoside-diphosphate reductase AT2G21790 (R1) mRNA, complete cds Length = 2887 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaag 387 |||||||| ||||| || || ||||||||||| |||||||| || || |||||||||||| Sbjct: 412 aggattgctgtgtcgaatctccacaagaacactaagaagtcattttctgagacgattaag 471 Query: 388 gacatgt 394 || |||| Sbjct: 472 gatatgt 478
>gb|AY035080.1| Arabidopsis thaliana putative ribonucleoside-diphosphate reductase large subunit (At2g21790) mRNA, complete cds Length = 2896 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaag 387 |||||||| ||||| || || ||||||||||| |||||||| || || |||||||||||| Sbjct: 412 aggattgctgtgtcgaatctccacaagaacactaagaagtcattttctgagacgattaag 471 Query: 388 gacatgt 394 || |||| Sbjct: 472 gatatgt 478
>gb|BT008573.1| Arabidopsis thaliana clone U09140 putative ribonucleoside-diphosphate reductase large subunit (At2g21790) mRNA, complete cds Length = 2516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaag 387 |||||||| ||||| || || ||||||||||| |||||||| || || |||||||||||| Sbjct: 238 aggattgctgtgtcgaatctccacaagaacactaagaagtcattttctgagacgattaag 297 Query: 388 gacatgt 394 || |||| Sbjct: 298 gatatgt 304
>gb|AF092841.1|AF092841 Arabidopsis thaliana ribonucleoside-diphosphate reductase large subunit mRNA, complete cds Length = 2657 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacgattaag 387 |||||||| ||||| || || ||||||||||| |||||||| || || |||||||||||| Sbjct: 293 aggattgctgtgtcgaatctccacaagaacactaagaagtcattttctgagacgattaag 352 Query: 388 gacatgt 394 || |||| Sbjct: 353 gatatgt 359
>emb|Y10861.1|NTRRR11 N.tabacum mRNA for ribonucleotide reductase, clone R1-1 Length = 2769 Score = 60.0 bits (30), Expect = 6e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 300 ccaccccgactatgcctccctcgcggccaggattgccgtgtccaacctgcacaagaacac 359 |||||| ||||| |||| ||| || || |||||||| |||||||| |||||||||| ||| Sbjct: 259 ccaccctgactacgcctgcctggctgcaaggattgctgtgtccaatctgcacaaga-cac 317 Query: 360 caagaag-tccttctccgagacgattaaggacatgtac 396 ||| || || || || ||||||||||||||||||||| Sbjct: 318 caaaaaaatcattttctgagacgattaaggacatgtac 355
>emb|AJ577371.1|TAE577371 Triticum aestivum partial mRNA for putative endo-1,3(4)-beta-glucanase Length = 512 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgc 296 |||||||||||||||||||||||||| |||| Sbjct: 324 tcgccgccgagaccgccgccgcgctcgccgc 354
>ref|NM_188958.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1590 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 548 tcgccggcgagaccgccgccgcgctcgccgcc 579
>ref|XM_467642.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2067 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 756 tcgccgccgagaccgccgccgccctcgccgcc 787
>ref|XM_506957.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643A10.32 mRNA Length = 2072 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 762 tcgccgccgagaccgccgccgccctcgccgcc 793
>ref|XM_463939.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1693 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 625 tcgccggcgagaccgccgccgcgctcgccgcc 656
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 20423261 tcgccggcgagaccgccgccgcgctcgccgcc 20423230 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgtacctgcactacaacgag 411 |||||||||||||||||||| Sbjct: 968323 tgtacctgcactacaacgag 968342
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 87041 tcgccgccgagaccgccgccgccctcgccgcc 87010
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 68814 tcgccggcgagaccgccgccgcgctcgccgcc 68845
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 104808 tcgccgccgagaccgccgccgccctcgccgcc 104839
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 11752 tcgccggcgagaccgccgccgcgctcgccgcc 11783
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 53891 tcgccggcgagaccgccgccgcgctcgccgcc 53860
>dbj|AK106726.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H03, full insert sequence Length = 1693 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||||||| ||||| Sbjct: 625 tcgccggcgagaccgccgccgcgctcgccgcc 656
>dbj|AK105446.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B05, full insert sequence Length = 2067 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 756 tcgccgccgagaccgccgccgccctcgccgcc 787
>dbj|AK101108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025E01, full insert sequence Length = 2072 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 762 tcgccgccgagaccgccgccgccctcgccgcc 793
>dbj|AK060686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G12, full insert sequence Length = 2013 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| ||| ||||| Sbjct: 565 tcgccgccgagaccgccgccgccctcgccgcc 596
>ref|XM_476150.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1890 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 265 ctcgccgccgagaccgccgccgc 287 ||||||||||||||||||||||| Sbjct: 541 ctcgccgccgagaccgccgccgc 563
>ref|XM_450862.1| Oryza sativa (japonica cultivar-group), mRNA Length = 282 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cgagctcgccgccgagaccgccgccgc 287 ||||||||||||||| ||||||||||| Sbjct: 170 cgagctcgccgccgaaaccgccgccgc 196
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 265 ctcgccgccgagaccgccgccgc 287 ||||||||||||||||||||||| Sbjct: 89854 ctcgccgccgagaccgccgccgc 89832
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cgagctcgccgccgagaccgccgccgc 287 |||||||||||||||||||| |||||| Sbjct: 3345532 cgagctcgccgccgagaccgacgccgc 3345558 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgc 287 |||||||||||||||||||| Sbjct: 717225 gccgccgagaccgccgccgc 717244
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 ttcgacaagatcacggcgcggct 155 ||||||||||||||||||||||| Sbjct: 1779419 ttcgacaagatcacggcgcggct 1779397 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggccaccgaagatgtacgtcgtga 103 ||||||||||||||||||| |||| Sbjct: 479567 ggccaccgaagatgtacgtggtga 479544
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cgagctcgccgccgagaccgccgccgc 287 ||||||||||||||| ||||||||||| Sbjct: 13315272 cgagctcgccgccgaaaccgccgccgc 13315298 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 873895 ccggcggcggcggcggaagg 873914
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 265 ctcgccgccgagaccgccgccgc 287 ||||||||||||||||||||||| Sbjct: 6858900 ctcgccgccgagaccgccgccgc 6858878 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctc 291 ||||||||||||| |||||||||||| Sbjct: 1648077 tcgccgccgagacggccgccgcgctc 1648052 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 265 ctcgccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||| ||| |||||||||||| ||||||| Sbjct: 27262234 ctcgccgccgccaccaccgccgcgctcatcgcctcc 27262269
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 261 cgagctcgccgccgagaccgccgccgc 287 ||||||||||||||| ||||||||||| Sbjct: 136706 cgagctcgccgccgaaaccgccgccgc 136732
>dbj|AK110395.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-F01, full insert sequence Length = 2844 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 267 cgccgccgagaccgccgccgcgctcac 293 |||||||| |||||||||||||||||| Sbjct: 1912 cgccgccgtgaccgccgccgcgctcac 1886
>dbj|AK099370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N02, full insert sequence Length = 2188 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 265 ctcgccgccgagaccgccgccgc 287 ||||||||||||||||||||||| Sbjct: 628 ctcgccgccgagaccgccgccgc 650
>dbj|AK063458.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G09, full insert sequence Length = 2206 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 265 ctcgccgccgagaccgccgccgc 287 ||||||||||||||||||||||| Sbjct: 627 ctcgccgccgagaccgccgccgc 649
>ref|NM_001030837.1| Gallus gallus ribonucleotide reductase M1 polypeptide (RRM1), mRNA Length = 3465 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaa 353 |||||||| ||||||||||||||||| Sbjct: 297 aggattgcagtgtccaacctgcacaa 322
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 ccacaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||||| Sbjct: 46955 ccacaccaccccggcggcggcggcgg 46930
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctc 291 ||||||||||||| |||||||||||| Sbjct: 100237 tcgccgccgagacggccgccgcgctc 100212
>gb|AY280635.1| Uncultured bacterium clone pbiow genomic region, partial sequence Length = 30796 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 caacaccccggcggcggcggcg 76 |||||||||||||||||||||| Sbjct: 3273 caacaccccggcggcggcggcg 3294
>emb|AJ719515.1| Gallus gallus mRNA for hypothetical protein, clone 2p9 Length = 3465 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaa 353 |||||||| ||||||||||||||||| Sbjct: 297 aggattgcagtgtccaacctgcacaa 322
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cgggcggacggagacggtgcac 132 |||||||||||||||||||||| Sbjct: 940453 cgggcggacggagacggtgcac 940474
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete sequence Length = 107848 Score = 44.1 bits (22), Expect = 0.38 Identities = 46/54 (85%) Strand = Plus / Plus Query: 328 aggattgccgtgtccaacctgcacaagaacaccaagaagtccttctccgagacg 381 |||||||| ||||| || || ||||||||||| |||||||| || || |||||| Sbjct: 24835 aggattgctgtgtcgaatctccacaagaacactaagaagtcattttctgagacg 24888
>gb|BC102454.1| Bos taurus ATPase, Na+/K+ transporting, beta 3 polypeptide, mRNA (cDNA clone MGC:127417 IMAGE:7948429), complete cds Length = 1524 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cccggcggcggcggcggaaggc 82 |||||||||||||||||||||| Sbjct: 77 cccggcggcggcggcggaaggc 56
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 ccacaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||||| Sbjct: 2679843 ccacaccaccccggcggcggcggcgg 2679868 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 10186184 cggcggcggcggcggaaggc 10186203 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 2238861 cggcggcggcggcggaaggc 2238880 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 3372 cggcggcggcggcggaaggc 3353
>ref|XM_226471.2| PREDICTED: Rattus norvegicus exosome component 6 (predicted) (Exosc6_predicted), mRNA Length = 939 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 gaccgccgccgcgctcaccgcc 297 |||||||||||||||||||||| Sbjct: 361 gaccgccgccgcgctcaccgcc 340
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 accgccgccgcgctcaccgcct 298 |||||||||||||||||||||| Sbjct: 3165695 accgccgccgcgctcaccgcct 3165716 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gctcgacgagctcgccgccga 275 ||||||||||||||||||||| Sbjct: 5901250 gctcgacgagctcgccgccga 5901230 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 acgagctcgccgccgagaccg 280 ||||||||||||||||||||| Sbjct: 4345266 acgagctcgccgccgagaccg 4345286 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cagctcgacgagctcgccgc 272 |||||||||||||||||||| Sbjct: 1911956 cagctcgacgagctcgccgc 1911937
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgc 289 |||||||||||||||||||||| Sbjct: 2753376 gccgccgagaccgccgccgcgc 2753397
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 cgccgagaccgccgccgcgctcaccg 295 ||||||||||| |||||||||||||| Sbjct: 1813738 cgccgagaccgtcgccgcgctcaccg 1813713
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 ccacaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||||| Sbjct: 2688874 ccacaccaccccggcggcggcggcgg 2688899 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 10257881 cggcggcggcggcggaaggc 10257900 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 2246642 cggcggcggcggcggaaggc 2246661 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 3372 cggcggcggcggcggaaggc 3353
>ref|NM_001035393.1| Bos taurus ATPase, Na+/K+ transporting, beta 3 polypeptide (ATP1B3), mRNA Length = 1524 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cccggcggcggcggcggaaggc 82 |||||||||||||||||||||| Sbjct: 77 cccggcggcggcggcggaaggc 56
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 gacgagctcgccgccgagaccgccgccgc 287 |||| ||| |||||||||||||||||||| Sbjct: 3645798 gacgcgctggccgccgagaccgccgccgc 3645826
>ref|XM_468087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 633 gccgccgagaccgccgccgccatgaccgcctcc 665
>ref|XM_507537.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_A01.6 mRNA Length = 2276 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 644 gccgccgagaccgccgccgccatgaccgcctcc 676
>ref|XM_507008.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_A01.6 mRNA Length = 1737 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 650 gccgccgagaccgccgccgccatgaccgcctcc 682
>ref|NM_191345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 267 cgccgccgagaccgccgccgcgctcaccg 295 |||||||| | |||||||||||||||||| Sbjct: 120 cgccgccgcggccgccgccgcgctcaccg 148
>gb|BC057122.1| Mus musculus ubiquitin specific peptidase 38, mRNA (cDNA clone MGC:73496 IMAGE:6834543), complete cds Length = 4604 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4089 tctgggctgctgtctccgctg 4109
>gb|BC058784.1| Mus musculus ubiquitin specific peptidase 38, mRNA (cDNA clone MGC:67662 IMAGE:6310341), complete cds Length = 4539 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4026 tctgggctgctgtctccgctg 4046
>gb|BC054404.1| Mus musculus ubiquitin specific peptidase 38, mRNA (cDNA clone MGC:62858 IMAGE:6494448), complete cds Length = 4711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4099 tctgggctgctgtctccgctg 4119
>ref|XM_980884.1| PREDICTED: Mus musculus ubiquitin specific peptidase 38 (Usp38), mRNA Length = 2811 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 2219 tctgggctgctgtctccgctg 2239
>ref|XM_542867.2| PREDICTED: Canis familiaris similar to NK2 transcription factor related, locus 2 (LOC485744), mRNA Length = 1023 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgga 78 ||||||||||||||||||||| Sbjct: 940 caccccggcggcggcggcgga 960
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctacgacggcaccaccaacca 21 ||||||||||||||||||||| Sbjct: 1151845 ctacgacggcaccaccaacca 1151825
>emb|X98924.1|SLMNPVRR Spodoptera littoralis nuclear polyhedrosis virus gene encoding ribonucleotide reductase Length = 2832 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 gccgtgtccaacctgcacaag 354 ||||||||||||||||||||| Sbjct: 564 gccgtgtccaacctgcacaag 584
>ref|XM_747064.1| Aspergillus fumigatus Af293 ribonucleotide reductase large subunit Rnr1 (Afu4g06690) partial mRNA Length = 2580 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 334 gccgtgtccaacctgcacaagaacaccaagaag 366 |||||||||||||| |||||| | ||||||||| Sbjct: 244 gccgtgtccaacctccacaagcaaaccaagaag 276
>gb|AC087115.10| Mus Musculus Strain C57Bl6/J Chromosome 8 RP23-93A22, complete sequence Length = 181849 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 52993 tctgggctgctgtctccgctg 52973
>dbj|AK142200.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330011D01 product:ubiquitin specific protease 38, full insert sequence Length = 4680 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4095 tctgggctgctgtctccgctg 4115
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttcgacaagatcacggcgcgg 153 ||||||||||||||||||||| Sbjct: 577178 ttcgacaagatcacggcgcgg 577198
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 cgccgccgagaccgccgccgcgctcaccg 295 |||||||| | |||||||||||||||||| Sbjct: 32087876 cgccgccgcggccgccgccgcgctcaccg 32087848 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 38635768 ccggcggcggcggcggaagg 38635749 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 23359946 caccccggcggcggcggcgg 23359965 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||| |||||||||||||| |||||| ||||| Sbjct: 11740923 tcgcggccgagaccgccgcggcgctcgccgcc 11740954
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 cgccgccgagaccgccgccgcgctcaccg 295 |||||||| | |||||||||||||||||| Sbjct: 129690 cgccgccgcggccgccgccgcgctcaccg 129662
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 cgccgccgagaccgccgccgc 287 ||||||||||||||||||||| Sbjct: 5050974 cgccgccgagaccgccgccgc 5050954 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgatccacaacaccccggcg 67 |||||||||||||||||||| Sbjct: 466835 cgatccacaacaccccggcg 466816 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gagaccgccgccgcgctcaccgcc 297 ||||||||||||||| |||||||| Sbjct: 435067 gagaccgccgccgcgttcaccgcc 435090
>ref|NM_027554.2| Mus musculus ubiquitin specific peptidase 38 (Usp38), mRNA Length = 4711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4099 tctgggctgctgtctccgctg 4119
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 ctcgccgccgagaccgccgccgcgc 289 |||||||||||| |||||||||||| Sbjct: 3808502 ctcgccgccgaggccgccgccgcgc 3808478
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 27131 gccgccgagaccgccgccgccatgaccgcctcc 27163
>gb|AE005080.1| Halobacterium sp. NRC-1 section 111 of 170 of the complete genome Length = 10784 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcacc 294 ||||||||| || |||||||||||||||| Sbjct: 8095 tcgccgccgggatcgccgccgcgctcacc 8067
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 accgccgccgcgctcaccgcc 297 ||||||||||||||||||||| Sbjct: 127049 accgccgccgcgctcaccgcc 127029
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 accgccgccgcgctcaccgcc 297 ||||||||||||||||||||| Sbjct: 39347 accgccgccgcgctcaccgcc 39327
>dbj|AK129464.1| Mus musculus mRNA for mKIAA1891 protein Length = 4644 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4054 tctgggctgctgtctccgctg 4074
>dbj|AK119746.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-D08, full insert sequence Length = 3917 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ggcgtctacaagggcgtcaccaccagccagctcgacgagctcgccgccgagac 278 ||||||||| | || ||||| |||| |||||||||||| | ||||||||||| Sbjct: 1202 ggcgtctaccacggtgtcacgaccatccagctcgacgacttggccgccgagac 1254
>dbj|AK106971.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-G05, full insert sequence Length = 2276 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 644 gccgccgagaccgccgccgccatgaccgcctcc 676
>dbj|AK100190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K01, full insert sequence Length = 1719 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 633 gccgccgagaccgccgccgccatgaccgcctcc 665
>dbj|AK100098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D19, full insert sequence Length = 1737 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 gccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||||||||||||| | ||||||||| Sbjct: 650 gccgccgagaccgccgccgccatgaccgcctcc 682
>ref|NM_209392.1| Eremothecium gossypii ADL057Wp (ADL057W), mRNA Length = 2673 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttcgacaagatcacggcgcgg 153 ||||||||||||||||||||| Sbjct: 43 ttcgacaagatcacggcgcgg 63
>gb|AF129458.1|AF129458 Chlamydomonas reinhardtii class II DNA photolyase (PHR2) gene, complete cds Length = 8203 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaaggc 82 ||||||||||||||||||||| Sbjct: 6979 ccggcggcggcggcggaaggc 6959
>gb|U62676.1|HSU62676 Halobacterium salinarium phototaxis transducer II and sensory rhodopsin II genes, complete cds Length = 3100 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcacc 294 ||||||||| || |||||||||||||||| Sbjct: 2669 tcgccgccgggatcgccgccgcgctcacc 2697
>gb|BC066786.1| Mus musculus cDNA clone IMAGE:30055982, containing frame-shift errors Length = 4546 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 tctgggctgctgtctccgctg 435 ||||||||||||||||||||| Sbjct: 4040 tctgggctgctgtctccgctg 4060
>gb|AY871276.1| Gekko japonicus GekBS057P mRNA, complete cds Length = 3041 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 301 caccccgactatgcctccctcgcggccaggattgccgtgtccaacctgcacaa 353 ||||| ||||||||| ||| || || ||||||||||| |||||| ||||||| Sbjct: 406 caccctgactatgccatcctggcagcgaggattgccgtctccaacttgcacaa 458
>gb|DQ176871.1| Streptomyces aureofaciens strain Tu117 lipomycin biosynthesis gene cluster, complete sequence Length = 66871 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ctcgacgagctcgccgccga 275 |||||||||||||||||||| Sbjct: 22570 ctcgacgagctcgccgccga 22589
>ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgtacctgcactacaacgag 411 |||||||||||||||||||| Sbjct: 381 tgtacctgcactacaacgag 400
>ref|XM_474329.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1878 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||| ||| ||||| Sbjct: 554 tcgccggcgagaccgccgccgctctcgccgcc 585
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 1280 cggcggcggcggcggaaggc 1261
>ref|XM_449996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 41 ccggcggcggcggcggaagg 60
>ref|XM_507424.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1342 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 74 ccggcggcggcggcggaagg 93
>ref|XM_507423.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1346 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 74 ccggcggcggcggcggaagg 93
>ref|XM_507422.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1666 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 75 ccggcggcggcggcggaagg 94
>ref|XM_506631.2| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1347 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 117 ccggcggcggcggcggaagg 136
>ref|NM_197274.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015K05.5), mRNA Length = 942 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 acaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||| Sbjct: 539 acaactccccggcggcggcggcgg 562
>ref|NM_183708.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||| |||||||||||||| |||||| ||||| Sbjct: 539 tcgcggccgagaccgccgcggcgctcgccgcc 570
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 agcactgcgacccggtgctcgtcg 208 |||||||||| ||||||||||||| Sbjct: 1131463 agcactgcgagccggtgctcgtcg 1131440
>ref|NM_190208.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 1144 ccggcggcggcggcggaagg 1163
>ref|XM_469387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1855 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 157 cggcggcggcggcggaaggc 176
>ref|NM_188838.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1684 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gccagctcgacgagctcgccgccg 274 |||||||||||| ||||||||||| Sbjct: 883 gccagctcgacgcgctcgccgccg 860
>ref|XM_477043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 576 caccccggcggcggcggcgg 595
>ref|NM_001034166.1| Pan troglodytes receptor interacting protein kinase 5 (RIPK5), mRNA Length = 3616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccccggcggcggcggcggaa 79 |||||||||||||||||||| Sbjct: 187 ccccggcggcggcggcggaa 206
>gb|AF301601.1| Takifugu rubripes nucleoporin 153 (NUP153) gene, complete cds Length = 43468 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcacccgatccacaacac 60 |||||||||||||||||||| Sbjct: 28875 cctcacccgatccacaacac 28856
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 42135 caccccggcggcggcggcgg 42154
>gb|AY022777.1| Oryza sativa microsatellite MRG5102 containing (CGC)X8, closest to marker pTA248, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 131 caccccggcggcggcggcgg 112
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 82348 cggcggcggcggcggaaggc 82367
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 14860 cggcggcggcggcggaaggc 14879
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 265 ctcgccgccgagaccgccgccgcgctcaccgcctcc 300 |||||||||| ||| |||||||||||| ||||||| Sbjct: 137202 ctcgccgccgccaccaccgccgcgctcatcgcctcc 137237
>ref|XM_584874.2| PREDICTED: Bos taurus similar to C-C chemokine receptor type 10 (C-C CKR-10) (CC-CKR-10) (CCR-10) (G-protein coupled receptor 2) (LOC539108), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 1189 caccccggcggcggcggcgg 1208
>ref|XM_329494.1| Neurospora crassa OR74A hypothetical protein (NCU08449.1) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cccggcggcggcggcggaag 80 |||||||||||||||||||| Sbjct: 706 cccggcggcggcggcggaag 725
>ref|XM_953659.1| Neurospora crassa OR74A hypothetical protein (NCU09409.1) partial mRNA Length = 969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 228 caccccggcggcggcggcgg 247
>ref|XM_953886.1| Neurospora crassa OR74A hypothetical protein (NCU09032.1) partial mRNA Length = 2835 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agctcagctacgggctcagc 180 |||||||||||||||||||| Sbjct: 107 agctcagctacgggctcagc 88
>ref|XM_958199.1| Neurospora crassa OR74A hypothetical protein (NCU08449.1) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cccggcggcggcggcggaag 80 |||||||||||||||||||| Sbjct: 706 cccggcggcggcggcggaag 725
>ref|XM_331423.1| Neurospora crassa OR74A hypothetical protein (NCU09032.1) partial mRNA Length = 2835 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agctcagctacgggctcagc 180 |||||||||||||||||||| Sbjct: 107 agctcagctacgggctcagc 88
>ref|XM_332100.1| Neurospora crassa OR74A hypothetical protein (NCU09409.1) partial mRNA Length = 969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 228 caccccggcggcggcggcgg 247
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 agaccgccgccgcgctcacc 294 |||||||||||||||||||| Sbjct: 1071014 agaccgccgccgcgctcacc 1071033
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 27692646 cggcggcggcggcggaaggc 27692665 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 3848530 caccccggcggcggcggcgg 3848511
>gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome 10, complete sequence Length = 183477 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acaccccggcggcggcggcg 76 |||||||||||||||||||| Sbjct: 72655 acaccccggcggcggcggcg 72636
>ref|XM_566442.1| Cryptococcus neoformans hypothetical protein (CNA00130) partial mRNA Length = 3025 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 2461 caccccggcggcggcggcgg 2480
>ref|XM_755379.1| Ustilago maydis 521 hypothetical protein (UM04325.1) partial mRNA Length = 3354 Score = 40.1 bits (20), Expect = 6.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 230 tctacaagggcgtcaccaccagccagctcgacgagctcgccgccgagaccgccgcc 285 ||||| |||| ||||||||| | |||||||| | ||||| || |||||||||||| Sbjct: 836 tctacgagggtgtcaccaccgtcgagctcgacaacctcgctgcggagaccgccgcc 891
>gb|AY163381.1| Zea mays putative ROP family GTPase ROP7 gene, complete cds Length = 2073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 109 cggcggcggcggcggaaggc 90
>emb|CR700397.2|CNS0G3DL Tetraodon nigroviridis full-length cDNA Length = 1705 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gagacgattaaggacatgta 395 |||||||||||||||||||| Sbjct: 918 gagacgattaaggacatgta 937
>emb|CR691646.2|CNS0FWMI Tetraodon nigroviridis full-length cDNA Length = 1458 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gagacgattaaggacatgta 395 |||||||||||||||||||| Sbjct: 681 gagacgattaaggacatgta 700
>emb|CR689330.2|CNS0FUU6 Tetraodon nigroviridis full-length cDNA Length = 1400 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gagacgattaaggacatgta 395 |||||||||||||||||||| Sbjct: 630 gagacgattaaggacatgta 649
>emb|CR684390.2|CNS0FR0Y Tetraodon nigroviridis full-length cDNA Length = 1639 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gagacgattaaggacatgta 395 |||||||||||||||||||| Sbjct: 855 gagacgattaaggacatgta 874
>gb|BC035660.1| Homo sapiens hypothetical protein MGC39900, mRNA (cDNA clone IMAGE:5721900), partial cds Length = 2220 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 caccgcctcccaccccgact 310 |||||||||||||||||||| Sbjct: 313 caccgcctcccaccccgact 294
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 205 gtcgcgcagaaggtctgcgccggcgtctacaagggcgtcaccac 248 ||||| ||||| || || |||||||| ||||| ||||||||||| Sbjct: 50085 gtcgctcagaaagtttgtgccggcgtttacaaaggcgtcaccac 50042
>gb|AC112342.14| Rattus norvegicus 14 BAC CH230-253H12 (Children's Hospital Oakland Research Institute) complete sequence Length = 150292 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgc 289 ||||||||||| |||||||||||| Sbjct: 146011 tcgccgccgaggccgccgccgcgc 146034
>emb|Z70227.1|HSV362H12 Human DNA sequence from clone GHc-362H12 on chromosome X, complete sequence Length = 41988 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 caccgcctcccaccccgact 310 |||||||||||||||||||| Sbjct: 29255 caccgcctcccaccccgact 29236
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cgccgccgagaccgccgccg 286 |||||||||||||||||||| Sbjct: 23766 cgccgccgagaccgccgccg 23747
>gb|BC081825.1| Rattus norvegicus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, mRNA (cDNA clone MGC:93547 IMAGE:7192904), complete cds Length = 1738 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgc 289 ||||||||||| |||||||||||| Sbjct: 125 tcgccgccgaggccgccgccgcgc 102
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||| ||| ||||| Sbjct: 106032 tcgccggcgagaccgccgccgctctcgccgcc 106001
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome Length = 101016 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ccagctcgacgagctcgccgccga 275 |||||||| ||||||||||||||| Sbjct: 63491 ccagctcgccgagctcgccgccga 63514
>emb|AJ278664.1|ZMA278664 Zea mays mRNA for putative Rop family GTPase, ROP7 (rop7 gene) Length = 1002 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 109 cggcggcggcggcggaaggc 90
>emb|AJ277295.1|SSP277295 Sphingomonas sp. LB126 fluorene and protocatechuic acid degradation operon and insertion sequence ISSsp126 Length = 14377 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cccggcggcggcggcggaag 80 |||||||||||||||||||| Sbjct: 4103 cccggcggcggcggcggaag 4084
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 acaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||| Sbjct: 39666 acaactccccggcggcggcggcgg 39689
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 acaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||| Sbjct: 123313 acaactccccggcggcggcggcgg 123336
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tacgacggcaccaccaacca 21 |||||||||||||||||||| Sbjct: 980552 tacgacggcaccaccaacca 980571
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ctcgccgccgagaccgccgc 284 |||||||||||||||||||| Sbjct: 890891 ctcgccgccgagaccgccgc 890910
>gb|AF452095.1|AF452095 Kitasatospora sp. F18-97 3-amino-5-hydroxybenzoic acid synthase gene, complete cds Length = 1167 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ctcgacgagctcgccgccga 275 |||||||||||||||||||| Sbjct: 439 ctcgacgagctcgccgccga 458
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 127154 caccccggcggcggcggcgg 127135
>gb|AY641092.1| Pan troglodytes dusty protein kinase mRNA, complete cds Length = 3616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccccggcggcggcggcggaa 79 |||||||||||||||||||| Sbjct: 187 ccccggcggcggcggcggaa 206
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||| ||| ||||| Sbjct: 34488547 tcgccggcgagaccgccgccgctctcgccgcc 34488516
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 acaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||| Sbjct: 18955375 acaactccccggcggcggcggcgg 18955352
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 gccagctcgacgagctcgccgccg 274 |||||||||||| ||||||||||| Sbjct: 26730101 gccagctcgacgcgctcgccgccg 26730124 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 5560660 caccccggcggcggcggcgg 5560641
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 27783969 cggcggcggcggcggaaggc 27783988 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 3848641 caccccggcggcggcggcgg 3848622
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 55003 caccccggcggcggcggcgg 54984
>gb|AC092384.5| Homo sapiens chromosome 16 clone RP11-830F9, complete sequence Length = 219070 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 ctatgcctccctcgcggccaggat 332 ||||||||||||||| |||||||| Sbjct: 23178 ctatgcctccctcgcagccaggat 23201
>ref|NM_013052.1| Rattus norvegicus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide (Ywhah), mRNA Length = 1689 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgc 289 ||||||||||| |||||||||||| Sbjct: 99 tcgccgccgaggccgccgccgcgc 76
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 134343 cggcggcggcggcggaaggc 134362
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 104896 caccccggcggcggcggcgg 104877
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 93741 ccggcggcggcggcggaagg 93722
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 38022 ccggcggcggcggcggaagg 38041
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 127394 cggcggcggcggcggaaggc 127375
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 50289 ccggcggcggcggcggaagg 50270
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gagctcgccgccgagaccgc 281 |||||||||||||||||||| Sbjct: 4645946 gagctcgccgccgagaccgc 4645927
>gb|AF245482.1|AF245482 Oryza sativa OSE3 (OSE3) gene, complete cds Length = 4402 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 1763 caccccggcggcggcggcgg 1744
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 85544 caccccggcggcggcggcgg 85563
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 85644 caccccggcggcggcggcgg 85663
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 146688 caccccggcggcggcggcgg 146707
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 67462 ccggcggcggcggcggaagg 67443
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||| |||||||||||||| |||||| ||||| Sbjct: 80091 tcgcggccgagaccgccgcggcgctcgccgcc 80122
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgtacctgcactacaacgag 411 |||||||||||||||||||| Sbjct: 131061 tgtacctgcactacaacgag 131080
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 gccagctcgacgagctcgccgccg 274 |||||||||||| ||||||||||| Sbjct: 76958 gccagctcgacgcgctcgccgccg 76981
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 73745 caccccggcggcggcggcgg 73726
>gb|AE005013.1| Halobacterium sp. NRC-1 section 44 of 170 of the complete genome Length = 13256 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gaccgccgccgcgctcaccg 295 |||||||||||||||||||| Sbjct: 8527 gaccgccgccgcgctcaccg 8546
>gb|U25284.2|OSU25284 Oryza sativa clone OSE3 leucine zipper protein mRNA, complete cds Length = 482 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 235 caccccggcggcggcggcgg 216
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 9543 cggcggcggcggcggaaggc 9524
>dbj|AK121793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095G14, full insert sequence Length = 1347 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 117 ccggcggcggcggcggaagg 136
>dbj|AK121297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110J24, full insert sequence Length = 511 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 244 caccccggcggcggcggcgg 225
>dbj|AK119913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F01, full insert sequence Length = 2216 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||| ||| ||||| Sbjct: 584 tcgccggcgagaccgccgccgctctcgccgcc 615
>dbj|AK120034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B04, full insert sequence Length = 1342 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 74 ccggcggcggcggcggaagg 93
>dbj|AK109004.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H02, full insert sequence Length = 1684 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gccagctcgacgagctcgccgccg 274 |||||||||||| ||||||||||| Sbjct: 883 gccagctcgacgcgctcgccgccg 860
>dbj|AK107980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-E05, full insert sequence Length = 1091 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 343 ccggcggcggcggcggaagg 362
>dbj|AK107398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-D07, full insert sequence Length = 1766 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 35 caccccggcggcggcggcgg 54
>dbj|AK106887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-F12, full insert sequence Length = 1921 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||| |||||||||||||| |||||| ||||| Sbjct: 641 tcgcggccgagaccgccgcggcgctcgccgcc 672
>emb|AJ341048.1|HSA341048 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LG17R Length = 768 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ccccggcggcggcggcggaa 79 |||||||||||||||||||| Sbjct: 51 ccccggcggcggcggcggaa 32
>dbj|AK103978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H08, full insert sequence Length = 1306 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 41 ccggcggcggcggcggaagg 60
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 1280 cggcggcggcggcggaaggc 1261
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 130853 caccccggcggcggcggcgg 130872
>dbj|AK068844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163O03, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 75 ccggcggcggcggcggaagg 94
>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full insert sequence Length = 2387 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgtacctgcactacaacgag 411 |||||||||||||||||||| Sbjct: 381 tgtacctgcactacaacgag 400
>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence Length = 160193 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 62174 caccccggcggcggcggcgg 62155
>dbj|AK061402.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H09, full insert sequence Length = 1346 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccggcggcggcggcggaagg 81 |||||||||||||||||||| Sbjct: 74 ccggcggcggcggcggaagg 93
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 22352 caccccggcggcggcggcgg 22333
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 186 cggcggcggcggcggaaggc 167
>gb|AY104576.1| Zea mays PCO142745 mRNA sequence Length = 1049 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 119 cggcggcggcggcggaaggc 100
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||| ||| ||||| Sbjct: 110077 tcgccggcgagaccgccgccgctctcgccgcc 110046
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgctcaccgcc 297 |||||| ||||||||||||||| ||| ||||| Sbjct: 20410 tcgccggcgagaccgccgccgctctcgccgcc 20379
>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence Length = 178741 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 91598 caccccggcggcggcggcgg 91579
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tacgacggcaccaccaacca 21 |||||||||||||||||||| Sbjct: 1011784 tacgacggcaccaccaacca 1011803
>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete sequence Length = 221351 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caccccggcggcggcggcgg 77 |||||||||||||||||||| Sbjct: 3923 caccccggcggcggcggcgg 3904
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 cagctcgacgagctcgccgccgag 276 ||||||||||||||||| |||||| Sbjct: 1688584 cagctcgacgagctcgcagccgag 1688561
>gb|AY609701.1| Sus scrofa clone Clu_26632.scr.msk.p1.Contig1, mRNA sequence Length = 1697 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 acaccccggcggcggcggcg 76 |||||||||||||||||||| Sbjct: 46 acaccccggcggcggcggcg 65
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gccggcgtctacaagggcgt 242 |||||||||||||||||||| Sbjct: 2546530 gccggcgtctacaagggcgt 2546511
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 acaacaccccggcggcggcggcgg 77 ||||| |||||||||||||||||| Sbjct: 18966605 acaactccccggcggcggcggcgg 18966582
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggcggcggcggcggaaggc 82 |||||||||||||||||||| Sbjct: 3372 cggcggcggcggcggaaggc 3353
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gctcagctacgggctcagcc 181 |||||||||||||||||||| Sbjct: 3216101 gctcagctacgggctcagcc 3216082
>dbj|D17445.1| Rattus norvegicus mRNA for 14-3-3 protein eta-subtype, complete cds Length = 1689 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 tcgccgccgagaccgccgccgcgc 289 ||||||||||| |||||||||||| Sbjct: 99 tcgccgccgaggccgccgccgcgc 76 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,509,445 Number of Sequences: 3902068 Number of extensions: 3509445 Number of successful extensions: 254017 Number of sequences better than 10.0: 212 Number of HSP's better than 10.0 without gapping: 231 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 232060 Number of HSP's gapped (non-prelim): 21952 length of query: 443 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 421 effective length of database: 17,147,199,772 effective search space: 7218971104012 effective search space used: 7218971104012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
