ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.6
2emb|AL158053.14| Human DNA sequence from clone RP11-156J23 on ch... 42 1.6
3emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 42 1.6
4gb|AC010140.3|AC010140 Homo sapiens BAC clone RP11-218E11 from Y... 42 1.6
5gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, comple... 42 1.6
6gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, c... 42 1.6
7gb|L01060.1|DOGIDUA03 Dog alpha-L-iduronidase (IDUA) gene, exons... 42 1.6
8ref|NM_195001.1| Oryza sativa (japonica cultivar-group) putative... 40 6.4
9gb|AC169506.1| Mus musculus BAC clone RP23-417L6 from chromosome... 40 6.4
10gb|AC005751.1| Homo sapiens chromosome 16, BAC clone 375G12 (LAN... 40 6.4
11ref|XM_362231.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.4
12gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, co... 40 6.4
13gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, co... 40 6.4
14gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome... 40 6.4
15emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, com... 40 6.4
16emb|AJ301559.2|RFA301559 Rhodococcus fascians ORF1 (partial), OR... 40 6.4
17emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on ch... 40 6.4
18emb|AL118508.27|HSJ737E23 Human DNA sequence from clone RP4-737E... 40 6.4
19emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D... 40 6.4
20emb|AL035411.28|HS592A1 Human DNA sequence from clone RP4-592A1 ... 40 6.4
21ref|XM_971080.1| PREDICTED: Tribolium castaneum hypothetical pro... 40 6.4
22emb|CR860580.1| Pongo pygmaeus mRNA; cDNA DKFZp459J237 (from clo... 40 6.4
23gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, com... 40 6.4
24gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.4
25gb|AC079310.20| Homo sapiens 12 BAC RP11-850F7 (Roswell Park Can... 40 6.4
26ref|NM_001038859.1| Drosophila melanogaster CG8585-RE, transcrip... 40 6.4
27ref|NM_001038858.1| Drosophila melanogaster CG8585-RB, transcrip... 40 6.4
28ref|NM_001038856.1| Drosophila melanogaster CG8585-RC, transcrip... 40 6.4
29gb|AY060342.1| Drosophila melanogaster GH23838 full length cDNA 40 6.4
30gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosom... 40 6.4
31gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome... 40 6.4
32gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nippon... 40 6.4
33gb|AC008381.8|AC008381 Homo sapiens chromosome 5 clone CTC-216O1... 40 6.4
34gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, r... 40 6.4
35dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
36gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, co... 40 6.4
37gb|AC154462.2| Mus musculus BAC clone RP24-165F12 from chromosom... 40 6.4
38gb|AC025752.8| Homo sapiens chromosome 5 clone CTC-430J12, compl... 40 6.4
39gb|AY928072.1| Drosophila melanogaster hyperpolarization-activat... 40 6.4
40gb|AY928070.1| Drosophila melanogaster hyperpolarization-activat... 40 6.4
41gb|AY928069.1| Drosophila melanogaster hyperpolarization-activat... 40 6.4
42gb|AF124300.1|AF124300 Drosophila melanogaster putative voltage-... 40 6.4
43dbj|AK065306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
44emb|CT010445.12| Mouse DNA sequence from clone RP23-285G1 on chr... 40 6.4
45gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35... 40 6.4
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
47emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chr... 40 6.4
48emb|AL627445.21| Mouse DNA sequence from clone RP23-81D2 on chro... 40 6.4
49emb|AL603706.13| Mouse DNA sequence from clone RP23-407I21 on ch... 40 6.4 
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      cggcggccgccgcttcggcac 83
               |||||||||||||||||||||
Sbjct: 2787904 cggcggccgccgcttcggcac 2787884



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 233     tcgccggccgccgtgcgcctcgcgtggg 260
               ||||||| ||||||||||||| ||||||
Sbjct: 3190319 tcgccggacgccgtgcgcctcacgtggg 3190292
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>emb|AL158053.14| Human DNA sequence from clone RP11-156J23 on chromosome Xq21.2-21.33
             Contains a discs, large homolog 7 (Drosophila) (DLG7)
             pseudogene, complete sequence
          Length = 177722

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   tcgggatctggatcgggacct 210
             |||||||||||||||||||||
Sbjct: 49039 tcgggatctggatcgggacct 49019
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 389    ggtcgtctagggcgagggcgg 409
              |||||||||||||||||||||
Sbjct: 256074 ggtcgtctagggcgagggcgg 256094
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>gb|AC010140.3|AC010140 Homo sapiens BAC clone RP11-218E11 from Y, complete sequence
          Length = 148342

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   tcgggatctggatcgggacct 210
             |||||||||||||||||||||
Sbjct: 68575 tcgggatctggatcgggacct 68555
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>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence
          Length = 211504

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    cttcccctcccccttcttctg 167
              |||||||||||||||||||||
Sbjct: 116457 cttcccctcccccttcttctg 116437
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>gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, complete sequence
          Length = 195319

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   gcttcccctcccccttcttct 166
             |||||||||||||||||||||
Sbjct: 83268 gcttcccctcccccttcttct 83288
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>gb|L01060.1|DOGIDUA03 Dog alpha-L-iduronidase (IDUA) gene, exons 7-12
          Length = 1557

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 26  cgcgaccgccgcacccccgcc 46
           |||||||||||||||||||||
Sbjct: 642 cgcgaccgccgcacccccgcc 662
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>ref|NM_195001.1| Oryza sativa (japonica cultivar-group) putative cytochrome P-450
           (OSJNBa0089D15.20), mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cccgcctcgccggccgccgtgcgc 250
           |||||||||| |||||||||||||
Sbjct: 941 cccgcctcgcgggccgccgtgcgc 918
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>gb|AC169506.1| Mus musculus BAC clone RP23-417L6 from chromosome 17, complete sequence
          Length = 202033

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cttcccctcccccttcttct 166
             ||||||||||||||||||||
Sbjct: 49229 cttcccctcccccttcttct 49210
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>gb|AC005751.1| Homo sapiens chromosome 16, BAC clone 375G12 (LANL), complete sequence
          Length = 162822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    cttcccctcccccttcttct 166
              ||||||||||||||||||||
Sbjct: 122202 cttcccctcccccttcttct 122221
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>ref|XM_362231.1| Magnaporthe grisea 70-15 hypothetical protein (MG04676.4) partial
           cds
          Length = 1512

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 tctgggcggcggcccctcgc 183
           ||||||||||||||||||||
Sbjct: 141 tctgggcggcggcccctcgc 160
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>gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, complete sequence
          Length = 173136

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    cttcccctcccccttcttct 166
              ||||||||||||||||||||
Sbjct: 149465 cttcccctcccccttcttct 149446
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>gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, complete sequence
          Length = 221640

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    cttcccctcccccttcttct 166
              ||||||||||||||||||||
Sbjct: 130611 cttcccctcccccttcttct 130592
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>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence
          Length = 171820

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cttcccctcccccttcttct 166
             ||||||||||||||||||||
Sbjct: 54182 cttcccctcccccttcttct 54163
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>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   ggcttcccctcccccttctt 164
             ||||||||||||||||||||
Sbjct: 99380 ggcttcccctcccccttctt 99399
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>emb|AJ301559.2|RFA301559 Rhodococcus fascians ORF1 (partial), ORF2, ORF3, vicA gene and ORF5
            (partial)
          Length = 18560

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   ccgcttcggcaccgctggcc 91
            ||||||||||||||||||||
Sbjct: 1882 ccgcttcggcaccgctggcc 1863
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>emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on chromosome 13 Contains the
              SPRY2 gene for sprouty homolog 2 (Drosophila) and a CpG
              island, complete sequence
          Length = 191652

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    cttcccctcccccttcttct 166
              ||||||||||||||||||||
Sbjct: 171838 cttcccctcccccttcttct 171857
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>emb|AL118508.27|HSJ737E23 Human DNA sequence from clone RP4-737E23 on chromosome 20p11.1-11.23
              Contains the gene complement component C1q receptor (C1QR),
              a putative novel gene, ESTs, STSs and GSSs, complete
              sequence
          Length = 123832

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    ggcttcccctcccccttctt 164
              ||||||||||||||||||||
Sbjct: 101614 ggcttcccctcccccttctt 101595
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>emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D8 on chromosome 6p12.1-21.1
             Contains genes for GUCA1A (guanylate cyclase activator 1A)
             and GUCA1B (guanylate cyclase activator 1B) both from
             retina, the 3' end of the TReP-132 gene for zinc finger
             transcription regulating protein, the MRPS10 gene for
             mitochondrial ribosomal protein S10, the 5' end the gene
             for a novel protein, the gene for a novel protein and two
             CpG Islands, complete sequence
          Length = 167078

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   cactccttcctttccccgcc 232
             ||||||||||||||||||||
Sbjct: 19456 cactccttcctttccccgcc 19475
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>emb|AL035411.28|HS592A1 Human DNA sequence from clone RP4-592A1 on chromosome 1p31.2-32.3
              Contains the 3' end of a novel gene (KIAA1915), an
              adenylate kinase 2 (AK2) pseudogene, the TACSTD2 gene for
              tumor-associated calcium signal transducer 2 and a CpG
              island, complete sequence
          Length = 146112

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    ctgccactccttcctttccc 228
              ||||||||||||||||||||
Sbjct: 143202 ctgccactccttcctttccc 143221
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>ref|XM_971080.1| PREDICTED: Tribolium castaneum hypothetical protein LOC656182
           (LOC656182), mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 tcgttccgaaaacaccacca 287
           ||||||||||||||||||||
Sbjct: 126 tcgttccgaaaacaccacca 145
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>emb|CR860580.1| Pongo pygmaeus mRNA; cDNA DKFZp459J237 (from clone DKFZp459J237)
          Length = 3022

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 tccccgcctcgccggccgcc 244
           ||||||||||||||||||||
Sbjct: 87  tccccgcctcgccggccgcc 106
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>gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, complete sequence
          Length = 194188

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    cttcccctcccccttcttct 166
              ||||||||||||||||||||
Sbjct: 187806 cttcccctcccccttcttct 187825
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     cgcctcgccggccgccgtgc 248
               ||||||||||||||||||||
Sbjct: 5266601 cgcctcgccggccgccgtgc 5266620
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>gb|AC079310.20| Homo sapiens 12 BAC RP11-850F7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180971

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    gtgaggcttcccctccccct 160
              ||||||||||||||||||||
Sbjct: 136877 gtgaggcttcccctccccct 136896
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>ref|NM_001038859.1| Drosophila melanogaster CG8585-RE, transcript variant E (Ih), mRNA
          Length = 4435

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gatcgggatctggatcggga 207
            ||||||||||||||||||||
Sbjct: 1417 gatcgggatctggatcggga 1436
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>ref|NM_001038858.1| Drosophila melanogaster CG8585-RB, transcript variant B (Ih), mRNA
          Length = 4324

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gatcgggatctggatcggga 207
            ||||||||||||||||||||
Sbjct: 1417 gatcgggatctggatcggga 1436
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>ref|NM_001038856.1| Drosophila melanogaster CG8585-RC, transcript variant C (Ih), mRNA
          Length = 4486

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gatcgggatctggatcggga 207
            ||||||||||||||||||||
Sbjct: 1579 gatcgggatctggatcggga 1598
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>gb|AY060342.1| Drosophila melanogaster GH23838 full length cDNA
          Length = 2828

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gatcgggatctggatcggga 207
           ||||||||||||||||||||
Sbjct: 824 gatcgggatctggatcggga 843
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>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete
              sequence
          Length = 212960

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    gaggcttcccctcccccttc 162
              ||||||||||||||||||||
Sbjct: 138936 gaggcttcccctcccccttc 138955
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>gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome 17, complete sequence
          Length = 146960

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    cttcccctcccccttcttct 166
              ||||||||||||||||||||
Sbjct: 115079 cttcccctcccccttcttct 115060
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>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0089D15, from Chromosome 10, complete sequence
          Length = 164679

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   cccgcctcgccggccgccgtgcgc 250
             |||||||||| |||||||||||||
Sbjct: 94368 cccgcctcgcgggccgccgtgcgc 94345
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>gb|AC008381.8|AC008381 Homo sapiens chromosome 5 clone CTC-216O13, complete sequence
          Length = 101303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   ctgccactccttcctttccc 228
             ||||||||||||||||||||
Sbjct: 78474 ctgccactccttcctttccc 78455
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>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone
             BACR16C17, complete sequence
          Length = 180425

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   gatcgggatctggatcggga 207
             ||||||||||||||||||||
Sbjct: 54883 gatcgggatctggatcggga 54902
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 227     cccgcctcgccggccgccgtgcgc 250
               |||||||||| |||||||||||||
Sbjct: 4097539 cccgcctcgcgggccgccgtgcgc 4097516
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>gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, complete sequence
          Length = 183408

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cttcccctcccccttcttct 166
             ||||||||||||||||||||
Sbjct: 92272 cttcccctcccccttcttct 92291
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>gb|AC154462.2| Mus musculus BAC clone RP24-165F12 from chromosome 14, complete sequence
          Length = 164631

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    ttcccctcccccttcttctg 167
              ||||||||||||||||||||
Sbjct: 129340 ttcccctcccccttcttctg 129359
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>gb|AC025752.8| Homo sapiens chromosome 5 clone CTC-430J12, complete sequence
          Length = 189154

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   ctgccactccttcctttccc 228
             ||||||||||||||||||||
Sbjct: 40770 ctgccactccttcctttccc 40751
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>gb|AY928072.1| Drosophila melanogaster hyperpolarization-activated ion channel
            variant DMIH-A1B2C2 mRNA, complete cds, alternatively
            spliced
          Length = 4411

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gatcgggatctggatcggga 207
            ||||||||||||||||||||
Sbjct: 1393 gatcgggatctggatcggga 1412
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>gb|AY928070.1| Drosophila melanogaster hyperpolarization-activated ion channel
            variant DMIH-A2B1C1 mRNA, complete cds, alternatively
            spliced
          Length = 4462

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gatcgggatctggatcggga 207
            ||||||||||||||||||||
Sbjct: 1555 gatcgggatctggatcggga 1574
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>gb|AY928069.1| Drosophila melanogaster hyperpolarization-activated ion channel
            variant DMIH-A1B1C1 mRNA, complete cds, alternatively
            spliced
          Length = 4300

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gatcgggatctggatcggga 207
            ||||||||||||||||||||
Sbjct: 1393 gatcgggatctggatcggga 1412
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>gb|AF124300.1|AF124300 Drosophila melanogaster putative voltage- and cyclic
           nucleotide-gated ion channel mRNA, complete cds
          Length = 3262

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gatcgggatctggatcggga 207
           ||||||||||||||||||||
Sbjct: 340 gatcgggatctggatcggga 359
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>dbj|AK065306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O07,
          full insert sequence
          Length = 1113

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 31 ccgccgcacccccgccaccg 50
          ||||||||||||||||||||
Sbjct: 81 ccgccgcacccccgccaccg 62
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>emb|CT010445.12| Mouse DNA sequence from clone RP23-285G1 on chromosome 17, complete
             sequence
          Length = 123987

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cttcccctcccccttcttct 166
             ||||||||||||||||||||
Sbjct: 52361 cttcccctcccccttcttct 52380
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>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete
              sequence
          Length = 229685

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gatcgggatctggatcggga 207
              ||||||||||||||||||||
Sbjct: 139945 gatcgggatctggatcggga 139964
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 227     cccgcctcgccggccgccgtgcgc 250
               |||||||||| |||||||||||||
Sbjct: 4098360 cccgcctcgcgggccgccgtgcgc 4098337
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>emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chromosome 4, complete
              sequence
          Length = 227165

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    cccctcccccttcttctggg 169
              ||||||||||||||||||||
Sbjct: 210630 cccctcccccttcttctggg 210649
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>emb|AL627445.21| Mouse DNA sequence from clone RP23-81D2 on chromosome 11, complete
              sequence
          Length = 216303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    ttcccctcccccttcttctg 167
              ||||||||||||||||||||
Sbjct: 198335 ttcccctcccccttcttctg 198354
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>emb|AL603706.13| Mouse DNA sequence from clone RP23-407I21 on chromosome 11, complete
             sequence
          Length = 220242

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cttcccctcccccttcttct 166
             ||||||||||||||||||||
Sbjct: 93699 cttcccctcccccttcttct 93718


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,117,465
Number of Sequences: 3902068
Number of extensions: 3117465
Number of successful extensions: 74735
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74428
Number of HSP's gapped (non-prelim): 307
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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