Clone Information

BLAST Search Result

Clone Name	bastl14e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AMELX_BOVIN (P02817) Amelogenin, X isoform precursor (Class I am...	35	0.054
2	PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associ...	33	0.27
3	LEF1_RAT (Q9QXN1) Lymphoid enhancer-binding factor 1 (LEF-1)	33	0.27
4	LIPM_NEIMA (P57037) Capsule polysaccharide modification protein ...	32	0.78
5	AMEL_CAVPO (Q9Z0K9) Amelogenin precursor	31	1.0
6	NO12A_MEDSA (Q40361) Early nodulin 12A precursor (N-12A) (Early ...	31	1.3
7	ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2...	30	1.7
8	AMEL_PIG (P45561) Amelogenin precursor (Amelogenin 173A/173B) (L...	30	1.7
9	MTB48_MYCTU (Q933K8) Antigen MTB48	30	1.7
10	LIPM_NEIMB (Q05013) Capsule polysaccharide modification protein ...	30	2.3
11	INP5E_MOUSE (Q9JII1) 72 kDa inositol polyphosphate 5-phosphatase...	30	2.3
12	ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)	30	2.9
13	Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)	30	2.9
14	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	30	2.9
15	NELFA_DROME (Q86NP2) Negative elongation factor A homolog	29	3.8
16	JUN_PIG (P56432) Transcription factor AP-1 (Activator protein 1)...	29	3.8
17	AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor	29	3.8
18	LEF1_MOUSE (P27782) Lymphoid enhancer-binding factor 1 (LEF-1)	29	3.8
19	AMELY_BOVIN (Q99004) Amelogenin, Y isoform precursor (Class II a...	29	3.8
20	NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex su...	29	3.8
21	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	29	3.8
22	SOX9_PIG (O18896) Transcription factor SOX-9	29	5.0
23	OTP_DROME (P56672) Homeobox protein orthopedia	29	5.0
24	SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	29	5.0
25	PGL1_CAEEL (Q9TZQ3) P granule abnormality protein 1	29	5.0
26	SPAP_STRMU (P23504) Cell surface antigen I/II precursor [Contain...	29	5.0
27	PURL_BACSK (Q5WJ86) Phosphoribosylformylglycinamidine synthase I...	29	5.0
28	AMELY_HUMAN (Q99218) Amelogenin, Y isoform precursor	29	5.0
29	AL2S4_MOUSE (Q3V0J1) Amyotrophic lateral sclerosis 2 chromosomal...	29	5.0
30	AMYB_MEDSA (O22585) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-gluca...	29	5.0
31	ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 prot...	28	6.6
32	RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB...	28	6.6
33	PUNC_MOUSE (Q8BQC3) Putative neuronal cell adhesion molecule pre...	28	6.6
34	DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)	28	6.6
35	KDGL_SYNY3 (Q55143) Probable diacylglycerol kinase (EC 2.7.1.107...	28	8.6
36	YAP7_YEAST (Q08182) AP-1-like transcription factor YAP7	28	8.6
37	UL61_HCMVA (P16818) Hypothetical protein UL61	28	8.6
38	ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ...	28	8.6
39	AMELY_PANTR (Q861X8) Amelogenin, Y isoform precursor (Fragment)	28	8.6
40	STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2...	28	8.6
41	PAC_STRMU (P11657) Major cell-surface adhesin PAc precursor (Ant...	28	8.6
42	RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-ri...	28	8.6

>AMELX_BOVIN (P02817) Amelogenin, X isoform precursor (Class I amelogenin)|
          Length = 213

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
 Frame = +1

Query: 13  HRVSLLLPAQDE---QAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPS------QELP 165
           H+ +L LPAQ     Q+    PH P   H+P +    + PLQ   P  P       Q LP
Sbjct: 116 HQPNLPLPAQQPFQPQSIQPQPHQPLQPHQPLQPMQPMQPLQPLQPLQPQPPVHPIQPLP 175

Query: 166 QSRESPPDFPI 198
                PP FP+
Sbjct: 176 PQPPLPPIFPM 186

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>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein|
           (PC2 glutamine/Q-rich-associated protein) (TPA-inducible
           gene 1 protein) (TIG-1) (Activator-recruited cofactor
           105 kDa component) (ARC105) (CTG repeat protein 7a)
          Length = 788

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
 Frame = +1

Query: 22  SLLLPAQDEQAHHTNPH--------PPYGIHKPTKIP--SKINPLQKSAPRIPSQEL 162
           S  LP Q +Q HHT  H        PP   ++P+++P  S+  PL   A  +P Q L
Sbjct: 283 SQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQML 339

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>LEF1_RAT (Q9QXN1) Lymphoid enhancer-binding factor 1 (LEF-1)|
          Length = 397

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = +1

Query: 1   SHSLHRVSLLLPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELP 165
           SH++H ++ L+   DE   H +P    G H P+ IPS++NP Q  +   P+ E+P
Sbjct: 146 SHAVHPLTPLITYSDE---HFSP----GSH-PSHIPSEVNPKQGMSRHPPAPEMP 192

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>LIPM_NEIMA (P57037) Capsule polysaccharide modification protein lipA|
          Length = 704

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
 Frame = +1

Query: 70  HPPY-------GIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPIXXXXXXXXXX 228
           +PPY       GI+  T  PS++  L  +A  +PS+ L Q+R++  DF I          
Sbjct: 97  YPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQARQA-MDF-ILQHHLSKYNH 154

Query: 229 XPQISRRDPSRTP 267
            P++S   P R+P
Sbjct: 155 APELSDDHPLRSP 167

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>AMEL_CAVPO (Q9Z0K9) Amelogenin precursor|
          Length = 226

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +1

Query: 34  PAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDF 192
           P Q  Q  H  P  P    +P +    I P+Q  +P  P Q LP  +  PP F
Sbjct: 148 PTQPVQPQHHQPIQPI---QPIQPIQPIQPIQPQSPLHPIQPLPPQQALPPMF 197

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>NO12A_MEDSA (Q40361) Early nodulin 12A precursor (N-12A) (Early nodulin NMS-8)|
          Length = 93

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +1

Query: 34  PAQDEQAHHTNPHPPYGIHKPT-KIPSKINPLQKSAP--RIPSQELPQSRESPPD 189
           P Q E   H  PH    +HKP  K P    P QK  P  + P +E P  R  P +
Sbjct: 34  PPQTEPPVHKPPHKEPPVHKPPHKDPPVNKPPQKEPPVHKPPRKEPPTHRHPPSE 88

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>ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 19) (DHHC-19)
          Length = 347

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +1

Query: 34  PAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPS-QELPQSRESPPDFP 195
           P+   +  H  P PP   H+P ++P K  P    A  +   + LP S E  P  P
Sbjct: 281 PSPPRRPKHCRPGPPGPQHQPRRVPGKGPPGSGEAAALQEMRRLPASVEKSPGGP 335

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>AMEL_PIG (P45561) Amelogenin precursor (Amelogenin 173A/173B) (Leucine-rich|
           amelogenin peptide) (LRAP)
          Length = 189

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 13  HRVSLLLPAQDE-QAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPD 189
           H+ +L LPAQ   Q     P P    H+P +  S ++P+Q   P+ P   +   +   PD
Sbjct: 116 HQPNLPLPAQQPFQPQPVQPQP----HQPLQPQSPMHPIQPLLPQPPLPPMFSMQSLLPD 171

Query: 190 FPI 198
            P+
Sbjct: 172 LPL 174

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>MTB48_MYCTU (Q933K8) Antigen MTB48|
          Length = 460

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -1

Query: 397 GGGGSRARFVGQD*GGREKIDQAGGG-LLGVGMERLGGRA 281
           GGGG  +  +G   GG E +  AG G + G+G  R GG A
Sbjct: 364 GGGGVPSAPLGSAIGGAESVRPAGAGDIAGLGQGRAGGGA 403

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>LIPM_NEIMB (Q05013) Capsule polysaccharide modification protein lipA|
          Length = 704

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
 Frame = +1

Query: 70  HPPY-------GIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPIXXXXXXXXXX 228
           +PPY       GI+  T  PS++  L  +A  +PS+ L Q++++  DF I          
Sbjct: 97  YPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQA-MDF-ILQHHLSKYNH 154

Query: 229 XPQISRRDPSRTP 267
            P++S   P R+P
Sbjct: 155 APELSDDHPLRSP 167

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>INP5E_MOUSE (Q9JII1) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 647

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 31  LPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKS 135
           LPA D Q   TNP PP+ I   T   S  NP  K+
Sbjct: 40  LPASDSQGSETNPMPPFSIPAKT---SNQNPQTKA 71

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>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)|
          Length = 1687

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 31   LPAQDEQAHHTNPHPPYGIHKPTKIPSK--INPLQKSAPRIPSQELPQSR 174
            LP +  + H  +P PP G   PT+ P K  ++P+  +    P++ L + R
Sbjct: 971  LPTEAPKKHCFDPVPPAGNSSPTEAPKKHHLDPVPPAGNSSPTEALKKHR 1020

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>Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)|
          Length = 875

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +1

Query: 67  PHPPYGIHKPTKIPSKI--NPLQKSAPRIPSQELPQSRESPPDFP 195
           P  PYG + P + P      P Q   P+ P Q+ PQ +  PP  P
Sbjct: 91  PFYPYGQYWPQQPPQPPPDQPQQPQPPQQPPQQPPQQQPQPPQPP 135

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +1

Query: 52  AHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFP 195
           A+HT+  PP  I+ P        P   SAP  P    P +   PP  P
Sbjct: 500 AYHTSSPPPAPIYTPPPPAPHCPPPPPSAPTPPIPSPPSTLPPPPQAP 547

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>NELFA_DROME (Q86NP2) Negative elongation factor A homolog|
          Length = 1248

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 251 THRGRRTQSVRPSAEALHPHPEQPAPCLINLLSSSLVLTYKPCPRAAAAALHPS 412
           T  G +TQS +P    +   P+Q  P L+   S+ ++L   P  + A A   PS
Sbjct: 575 TSSGSQTQSQQPQTLQVQQAPQQSHPPLLINSSTPVILASSPSAQRAKALALPS 628

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>JUN_PIG (P56432) Transcription factor AP-1 (Activator protein 1) (AP1)|
           (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17
           oncogene homolog)
          Length = 331

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +1

Query: 25  LLLPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPI 198
           L  PAQ +Q     P PP+  H P + P ++  L++    +P  E+P   E+PP  PI
Sbjct: 195 LAFPAQPQQQQQQPPQPPH--HLPVQHP-RLQALKEEPQTVP--EMP--GETPPLSPI 245

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>AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor|
          Length = 191

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +1

Query: 49  QAHHTN-PHPPYGIHKPTKI-PSKINPLQKSAPRIPSQELPQSRESPPDFPI 198
           Q H  N P P    ++P  + P    P+Q   P  P Q LP     PP FP+
Sbjct: 113 QHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPM 164

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>LEF1_MOUSE (P27782) Lymphoid enhancer-binding factor 1 (LEF-1)|
          Length = 397

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +1

Query: 1   SHSLHRVSLLLPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELP 165
           SH++H ++ L+   DE   H +P    G H P+ IPS +N  Q  +   P+ E+P
Sbjct: 146 SHAVHPLTPLITYSDE---HFSP----GSH-PSHIPSDVNSKQGMSRHPPAPEIP 192

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>AMELY_BOVIN (Q99004) Amelogenin, Y isoform precursor (Class II amelogenin)|
          Length = 192

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  HRVSLLLPAQDE-QAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPD 189
           H+ +L LPAQ   Q     P P    H+P +    ++P+Q+  P+ P   +   +  PP 
Sbjct: 116 HQPNLPLPAQQSFQPQPIQPQP----HQPLQPQPPVHPIQRLPPQPPLPPIFPMQPLPPV 171

Query: 190 FP 195
            P
Sbjct: 172 LP 173



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = +1

Query: 49  QAHHTN-PHPPYGIHKPTKI-PSKINPLQKSAPRIPSQELPQSRESPPDFPI 198
           Q H  N P P     +P  I P    PLQ   P  P Q LP     PP FP+
Sbjct: 114 QHHQPNLPLPAQQSFQPQPIQPQPHQPLQPQPPVHPIQRLPPQPPLPPIFPM 165

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>NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein 1
          Length = 202

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/38 (50%), Positives = 19/38 (50%)
 Frame = -1

Query: 400 RGGGGSRARFVGQD*GGREKIDQAGGGLLGVGMERLGG 287
           RGGGG R R      GGR   D  GGG  G G  R GG
Sbjct: 6   RGGGGFRGR------GGR---DGGGGGRFGGGGGRFGG 34

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 100  KIPSKINPLQKSAPRIPSQELPQSRESPP 186
            +IPS I   +K  PR PSQ+   S+ESPP
Sbjct: 1294 EIPSHIPSDEKDLPREPSQKDTISQESPP 1322

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>SOX9_PIG (O18896) Transcription factor SOX-9|
          Length = 509

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +1

Query: 46  EQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFP 195
           +QA    PHPP    +P  +P         AP  P   LPQ  ++PP  P
Sbjct: 339 QQAPPPPPHPP---QQPPPVPQ--------APAQPQAALPQQPQAPPQQP 377

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>OTP_DROME (P56672) Homeobox protein orthopedia|
          Length = 264

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +1

Query: 31  LPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPD 189
           +P   +Q   T+ H     H+        +P+    P    Q+LPQS +SP D
Sbjct: 175 MPLHQQQQQQTHQHQQQQTHQH-------HPMAPPTPTQQQQQLPQSMQSPSD 220

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>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1575

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
 Frame = +1

Query: 31   LPAQDEQAHHTNPHPPYGIHKP------TKIPSK--INPLQKSAPRIPSQELPQSRESPP 186
            LP +  +A    P PP     P      T +P K    PL+   P  P    P +R +PP
Sbjct: 1064 LPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP 1123

Query: 187  DFP 195
              P
Sbjct: 1124 QRP 1126

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>PGL1_CAEEL (Q9TZQ3) P granule abnormality protein 1|
          Length = 730

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = -1

Query: 397 GGGGSRARFVGQD*GGREKIDQAGGGLLGVGMERLGGR 284
           GGGG R  + G D GGR       GG  G G    GGR
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGR 709

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>SPAP_STRMU (P23504) Cell surface antigen I/II precursor [Contains: Cell surface|
            antigen I; Cell surface antigen II]
          Length = 1562

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/73 (21%), Positives = 27/73 (36%)
 Frame = +1

Query: 28   LLPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPIXXX 207
            L PA  E ++   P PP       +    + P  +  P  P+  + Q   +PP  P    
Sbjct: 930  LEPAPVEPSYEAEPTPPTPTPDQPEPNKPVEPTYEVIPTPPTDPVYQDLPTPPSVPTVHF 989

Query: 208  XXXXXXXXPQISR 246
                    PQ+++
Sbjct: 990  HYFKLAVQPQVNK 1002

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>PURL_BACSK (Q5WJ86) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 741

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 88  HKPTKIPSKINPLQKSAPRIPSQELPQSRES 180
           HKP+K+P+  +  Q+ AP IP  E+ ++ E+
Sbjct: 382 HKPSKVPAYFDAFQQQAPYIP--EITEANET 410

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>AMELY_HUMAN (Q99218) Amelogenin, Y isoform precursor|
          Length = 206

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  HRVSLLLPAQDE-QAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPD 189
           H+ +L LPAQ   Q     P P    H+P +    + P+Q   P+ P   +   R  PP 
Sbjct: 130 HQPNLPLPAQQPFQPQPVQPQP----HQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPI 185

Query: 190 FP 195
            P
Sbjct: 186 LP 187

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>AL2S4_MOUSE (Q3V0J1) Amyotrophic lateral sclerosis 2 chromosomal region|
           candidate gene 4 protein homolog
          Length = 427

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 242 HGETHRGRRTQSVRPSAEALHPHPEQPAP 328
           H E    RR +   P A  L  HPE PAP
Sbjct: 76  HAEPVVNRRAEGSEPPAAELKEHPEAPAP 104

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>AMYB_MEDSA (O22585) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan|
           maltohydrolase)
          Length = 496

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 94  PTKIPSKINPLQKSAPRIPSQELPQSRESPPDFP 195
           P K    I PL++S P+IP   L ++ +  P FP
Sbjct: 452 PEKYNHGIPPLKRSGPKIPDDVLNEATKPIPPFP 485

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>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)|
          Length = 892

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/54 (31%), Positives = 20/54 (37%)
 Frame = +1

Query: 34  PAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFP 195
           P +  Q  H NPH          + SK  P   S PR P     Q   +P D P
Sbjct: 418 PPRTSQEPHQNPHGVIPSESKPFVASKPKPHTPSLPRPPGCPAQQGGSAPIDPP 471

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>RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB-RGS)|
          Length = 967

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +1

Query: 31  LPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPP 186
           LP   E     +P P   +    ++PS  NP        PSQELP  ++ PP
Sbjct: 452 LPPGQELPPSKDPSPSQELPPGQELPSSKNPS-------PSQELPAGQDLPP 496

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>PUNC_MOUSE (Q8BQC3) Putative neuronal cell adhesion molecule precursor|
          Length = 813

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 251 THRGRRTQSVRPSAEALHPHPEQPAPCLINLL-SSSLVLTYKPCPRAA 391
           T RG    SV   A  L   P  P P  + LL SSSL L +KP PR A
Sbjct: 514 TPRGASLASVPTLASTLGEAPVPP-PLSVRLLGSSSLQLLWKPWPRLA 560

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>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 555

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -1

Query: 400 RGGGGSRARFVGQD*GGREKIDQAGGGLLGVGMERLGG 287
           RGGGG      G+D GG    D+ GGG  G G    GG
Sbjct: 14  RGGGGYGGGGYGRDRGGDRGGDRNGGGFGGNGNGYGGG 51

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>KDGL_SYNY3 (Q55143) Probable diacylglycerol kinase (EC 2.7.1.107) (DAGK)|
           (Diglyceride kinase) (DGK)
          Length = 175

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 49  QAHHTNPHPPYGIHKPTKIPSKINPLQKSA 138
           +A+ T P PP G+  P   P    PL+K+A
Sbjct: 23  KANQTQPPPPLGLVVPASKPGAKKPLRKNA 52

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>YAP7_YEAST (Q08182) AP-1-like transcription factor YAP7|
          Length = 245

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 118 NPLQKSAPRIPSQELPQSRESPPDFPI 198
           N LQK+ P I +    Q  E+PPD PI
Sbjct: 193 NELQKALPLIVNTPFQQQPENPPDNPI 219

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>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
 Frame = +1

Query: 67  PHPPYGIHKPTKIPSKINPLQK-----SAPRIPSQEL--PQSRESPP 186
           P PP G  + T+ PS+  PL +      AP +P      P  R SPP
Sbjct: 121 PEPPRGSRRETRKPSRSTPLPELLTGPPAPNLPGPIAVEPGRRPSPP 167

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>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +1

Query: 40   QDEQAHHTNPHPPYGIHKPTKIPSKINPL---QKSAPRIPSQELPQSRESP 183
            Q +Q   +    P G   P K P+K +P    QK+ PR  S  LP+  E P
Sbjct: 3417 QQQQPKASQTPVPQGAASPDKDPAKESPKPEEQKNVPRELSPLLPKPPEEP 3467

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>AMELY_PANTR (Q861X8) Amelogenin, Y isoform precursor (Fragment)|
          Length = 203

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  HRVSLLLPAQDE-QAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPD 189
           H+ +L LPAQ   Q     P P    H+P +    + P+Q   P+ P   +   R  PP 
Sbjct: 130 HQPNLPLPAQQPFQPQPVQPLP----HQPMQPQPPVQPMQPLLPQPPLPPMFPMRPLPPI 185

Query: 190 FP 195
            P
Sbjct: 186 LP 187

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>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)|
          Length = 939

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = +1

Query: 34  PAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAP-----RIPSQELPQSRESPP 186
           P Q   A H+  +P +  HKP   PSK  P  KS P       PS+  P    SPP
Sbjct: 219 PRQINSASHSLSNPKHKQHKPKVKPSK--PEAKSKPVSVKKSFPSKN-PLKNSSPP 271

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>PAC_STRMU (P11657) Major cell-surface adhesin PAc precursor (Antigen I/II)|
          Length = 1565

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/73 (21%), Positives = 27/73 (36%)
 Frame = +1

Query: 28   LLPAQDEQAHHTNPHPPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPIXXX 207
            L PA  E ++   P PP       +    + P  +  P  P+  + Q   +PP  P    
Sbjct: 933  LEPAPVEPSYEAEPTPPTPTPDQPEPNKPVEPTYEVIPTPPTDPVYQDLPTPPSDPTVHF 992

Query: 208  XXXXXXXXPQISR 246
                    PQ+++
Sbjct: 993  HYFKLAVQPQVNK 1005

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>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -1

Query: 400 RGGGGSRARFVGQD*GGREKIDQAGGGLLGVGMER 296
           RGGGG R  F G   GG      +GGG  G G +R
Sbjct: 74  RGGGGDRGGFGGGGRGGARVSSYSGGG--GGGRDR 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.133    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,540,057
Number of Sequences: 219361
Number of extensions: 902343
Number of successful extensions: 2619
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2589
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result