>IPO11_HUMAN (Q9UI26) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +3

Query: 240 SMSLDVTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 356
           S S  V Q+L  A S D ++ K AEE LKQ++ Q  PGF
Sbjct: 5   SASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQ--PGF 41

>IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +3

Query: 240 SMSLDVTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 356
           S S  V Q+L  A S D ++ K AEE LKQ++ Q  PGF
Sbjct: 5   SASSVVLQVLTQATSQDTAVLKPAEEQLKQWETQ--PGF 41

>PARD3_RAT (Q9Z340) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Atypical PKC-specific-binding protein) (ASBP)
          Length = 1337

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
 Frame = +1

Query: 94  GLAPSPNRRATASAPSRDLGRLKLRRAVQLRHT--------RRRQLPPHLSSQQEESA 243
           GL  SP R A  S    + G+ +L   V + H         R   LPPHLS Q   S+
Sbjct: 724 GLDESPTRNAALSRIMGESGKCQLSPTVNMPHDDTVMIEDDRLPVLPPHLSDQSSSSS 781

>PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Ephrin-interacting protein) (PHIP)
          Length = 1333

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = +1

Query: 94  GLAPSPNRRATASAPSRDLGRLKLRRAVQLRHT--------RRRQLPPHLSSQQEESA 243
           GL  SP R A   A SR +G+ +L   V + H         R   LPPHLS Q   S+
Sbjct: 724 GLDESPTRNA---ALSRIMGKCQLSPTVNMPHDDTVMIEDDRLPVLPPHLSDQSSSSS 778

>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha)
          Length = 1356

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
 Frame = +1

Query: 94  GLAPSPNRRATASAPSRDLGRLKLRRAVQL--------RHTRRRQLPPHLSSQQEESA 243
           GL  SP+R A  S    + G+ +L   V +           R   LPPHLS Q   S+
Sbjct: 724 GLDESPSRNAALSRIMGESGKYQLSPTVNMPQDDTVIIEDDRLPVLPPHLSDQSSSSS 781

>CCD27_HUMAN (Q2M243) Coiled-coil domain-containing protein 27|
          Length = 656

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 21/46 (45%), Positives = 22/46 (47%)
 Frame = +1

Query: 106 SPNRRATASAPSRDLGRLKLRRAVQLRHTRRRQLPPHLSSQQEESA 243
           SP RR   S  S  LGRL L +A   RH    Q   H    QEESA
Sbjct: 283 SPGRREQLSDASLKLGRLSLLKAFS-RHEEELQ---HWWQMQEESA 324

>CAPK_STAAU (P39860) Protein capK|
          Length = 449

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 255 VTQILLSAQSADGSIRKHAEESLKQFQEQNLPGF 356
           + Q+++SA  ADG   K+  + L +FQ + L G+
Sbjct: 183 LNQLMISAYHADGENLKYYIKKLNKFQPETLDGY 216

>PATL5_ARATH (Q9M0R2) Patellin-5|
          Length = 668

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +1

Query: 103 PSPNRRATASAPSRDLGRLKLRRAVQLRHTRRRQLPPHLSSQQEES 240
           P P    T++  SR L  +  R   ++   ++ Q+P  L S +EE+
Sbjct: 250 PPPPSTTTSTVASRSLAEMMNREEAEVEEKQKIQIPRSLGSFKEET 295

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 118  RATASAPSRDLGRLKLRRAVQLRHTRRRQ 204
            RA A AP+R L  L+LRRA + R  +RR+
Sbjct: 2264 RARARAPARLLPELRLRRARRPRPRQRRR 2292

>SPS1_YEAST (P08458) Sporulation-specific protein 1 (EC 2.7.11.1)|
          Length = 490

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 279 QSADGSIRKHAEESLKQF--QEQNLPGFXXXXXXELA 383
           ++ D   RK+  E LKQF   E N+PGF      E++
Sbjct: 443 RARDDETRKYVNEMLKQFIKTEANVPGFNEVFIEEIS 479

>HYPF_AZOCH (Q43950) Carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl|
           phosphate-converting enzyme hypF) ([NiFe]-hydrogenase
           maturation factor hypF) (Hydrogenase maturation protein
           hypF)
          Length = 776

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 94  GLAPSPNRRATASAPSRDLGRLKLRRAVQLRHTRRRQLPPHLSSQQEESACR 249
           GLAP   R A +      LG  +L+ A+ L    R  L PH+       ACR
Sbjct: 405 GLAPQEIRLARSGPSVLALGG-QLKNAICLTQGDRAWLSPHIGDLHSADACR 455

>CH076_HUMAN (Q96K31) Protein C8orf76|
          Length = 380

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 298 LESMLKKASSSFRSKTSQVFCSPSQVSWPTTRNLR 402
           +E+ LK  +S  R++    F  P Q S+   RNLR
Sbjct: 258 IETQLKACASFIRTRLLLQFTQPQQTSFALERNLR 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,249,058
Number of Sequences: 219361
Number of extensions: 500585
Number of successful extensions: 1476
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)