ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017369.1| Zea mays clone EL01N0324H03.c mRNA sequence 291 1e-75
2gb|AY109813.1| Zea mays CL4777_1 mRNA sequence 236 5e-59
3ref|XM_466219.1| Oryza sativa (japonica cultivar-group), mRNA 192 7e-46
4dbj|AK068385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 7e-46
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
6dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
7dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
8ref|NM_195439.1| Oryza sativa (japonica cultivar-group) putative... 42 1.6
9emb|X80224.1|SCYBR1212 S.cerevisiae CDC28, YBR1212, and YBR1213 ... 42 1.6
10ref|NM_005934.3| Homo sapiens myeloid/lymphoid or mixed-lineage ... 42 1.6
11gb|AC099040.10| Oryza sativa chromosome 10 BAC OSJNBa0004P12 gen... 42 1.6
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13gb|AC011471.6|AC011471 Homo sapiens chromosome 19 clone CTC-503J... 42 1.6
14dbj|AK064659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
15emb|Z36031.1|SCYBR162C S.cerevisiae chromosome II reading frame ... 42 1.6
16gb|DQ331222.1| Synthetic construct Saccharomyces cerevisiae clon... 42 1.6
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
18gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complet... 42 1.6
19gb|L04285.1|HUMENL Human germline ENL mRNA, complete cds 42 1.6
20dbj|D14539.1|HUMLTG19 Human mRNA for LTG19 42 1.6
21gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 6.2
22gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
23gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosom... 40 6.2
24gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
25ref|XM_426973.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 6.2
26gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 6.2
27gb|AC154903.4| Mus musculus BAC clone RP23-414E24 from chromosom... 40 6.2
28gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome... 40 6.2
29gb|AY123844.1| Sorghum bicolor glutamate/malate translocator (Di... 40 6.2
30ref|XM_969890.1| PREDICTED: Tribolium castaneum similar to CG793... 40 6.2
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33gb|AC079130.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.2
34emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.2
35emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence 40 6.2
36gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.2
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
38emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298... 40 6.2
39emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chro... 40 6.2 
>gb|BT017369.1| Zea mays clone EL01N0324H03.c mRNA sequence
          Length = 1374

 Score =  291 bits (147), Expect = 1e-75
 Identities = 215/238 (90%)
 Strand = Plus / Minus

                                                                        
Query: 221  atgggtggaagcaactatgatgacgactgggtgttgcccagtgctgacatcactcttgtt 280
            |||||||||||| | |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 1341 atgggtggaagccagtatgatgatgactgggtgttgcccagtgccgatatcactcttgtt 1282

                                                                        
Query: 281  cttgttggaaaacttggctatggcaagagtgcaactggcaatagtatccttggacgggaa 340
            || ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1281 ctggttgggaaacttggctatggcaagagtgcaactggaaatagcatccttggacgggaa 1222

                                                                        
Query: 341  gcatttgtatcagaatactctcatgctagtgtgancaatacttgtcagatgggaagcacc 400
            ||||||||||||||||| || ||||| ||||| |  |||||||||||| |||||||||| 
Sbjct: 1221 gcatttgtatcagaatattcacatgccagtgttactaatacttgtcagttgggaagcact 1162

                                                                      
Query: 401  atgctgacggatggccgcaccatcaatgttattgatacaccaggattatttgacatga 458
            |  |||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1161 accctgaaggacggccgcaccatcaatgttattgatacaccagggttatttgatatga 1104
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>gb|AY109813.1| Zea mays CL4777_1 mRNA sequence
          Length = 1239

 Score =  236 bits (119), Expect = 5e-59
 Identities = 181/202 (89%)
 Strand = Plus / Plus

                                                                       
Query: 257 cccagtgctgacatcactcttgttcttgttggaaaacttggctatggcaagagtgcaact 316
           |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 143 cccagtgccgatatcactcttgttcttgttgggaaacttggctatggcaagagtgcaact 202

                                                                       
Query: 317 ggcaatagtatccttggacgggaagcatttgtatcagaatactctcatgctagtgtganc 376
           || ||||| |||||||||||||||||||||||||||||||| || |||||  |||| |  
Sbjct: 203 ggaaatagcatccttggacgggaagcatttgtatcagaatattcacatgccggtgttact 262

                                                                       
Query: 377 aatacttgtcagatgggaagcaccatgctgacggatggccgcaccatcaatgttattgat 436
           |||||||||||| |||||||||| |  |||| ||| ||||| ||||||||||||||||||
Sbjct: 263 aatacttgtcagctgggaagcactaccctgatggacggccggaccatcaatgttattgat 322

                                 
Query: 437 acaccaggattatttgacatga 458
           |||||||| |||||||| ||||
Sbjct: 323 acaccagggttatttgatatga 344
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>ref|XM_466219.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1187

 Score =  192 bits (97), Expect = 7e-46
 Identities = 204/240 (85%)
 Strand = Plus / Plus

                                                                       
Query: 221 atgggtggaagcaactatgatgacgactgggtgttgcccagtgctgacatcactcttgtt 280
           ||||| |||||| | || ||||| ||||||| |||||| || |||||||||||| | |||
Sbjct: 18  atgggaggaagcgaatacgatgatgactgggagttgcctagcgctgacatcactgtagtt 77

                                                                       
Query: 281 cttgttggaaaacttggctatggcaagagtgcaactggcaatagtatccttggacgggaa 340
           |||   || |||||||||| ||||||||| |||||||||||||| ||| ||||| | |||
Sbjct: 78  ctttgcggcaaacttggctgtggcaagagcgcaactggcaatagcatcgttggaagagaa 137

                                                                       
Query: 341 gcatttgtatcagaatactctcatgctagtgtgancaatacttgtcagatgggaagcacc 400
           |||||||||||||| ||||| ||||||||||||| || |||||||||  |||  ||||||
Sbjct: 138 gcatttgtatcagagtactcccatgctagtgtgaccagtacttgtcaattggccagcacc 197

                                                                       
Query: 401 atgctgacggatggccgcaccatcaatgttattgatacaccaggattatttgacatgacc 460
             ||| | ||||||||| ||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 198 gcgctaaaggatggccgtaccctcaatgttattgatacgccaggattatttgaaatgacc 257
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>dbj|AK068385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D08, full
           insert sequence
          Length = 1307

 Score =  192 bits (97), Expect = 7e-46
 Identities = 204/240 (85%)
 Strand = Plus / Plus

                                                                       
Query: 221 atgggtggaagcaactatgatgacgactgggtgttgcccagtgctgacatcactcttgtt 280
           ||||| |||||| | || ||||| ||||||| |||||| || |||||||||||| | |||
Sbjct: 138 atgggaggaagcgaatacgatgatgactgggagttgcctagcgctgacatcactgtagtt 197

                                                                       
Query: 281 cttgttggaaaacttggctatggcaagagtgcaactggcaatagtatccttggacgggaa 340
           |||   || |||||||||| ||||||||| |||||||||||||| ||| ||||| | |||
Sbjct: 198 ctttgcggcaaacttggctgtggcaagagcgcaactggcaatagcatcgttggaagagaa 257

                                                                       
Query: 341 gcatttgtatcagaatactctcatgctagtgtgancaatacttgtcagatgggaagcacc 400
           |||||||||||||| ||||| ||||||||||||| || |||||||||  |||  ||||||
Sbjct: 258 gcatttgtatcagagtactcccatgctagtgtgaccagtacttgtcaattggccagcacc 317

                                                                       
Query: 401 atgctgacggatggccgcaccatcaatgttattgatacaccaggattatttgacatgacc 460
             ||| | ||||||||| ||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 318 gcgctaaaggatggccgtaccctcaatgttattgatacgccaggattatttgaaatgacc 377
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  168 bits (85), Expect = 1e-38
 Identities = 189/224 (84%)
 Strand = Plus / Plus

                                                                            
Query: 221      atgggtggaagcaactatgatgacgactgggtgttgcccagtgctgacatcactcttgtt 280
                ||||| |||||| | || ||||| ||||||| |||||| || |||||||||||| | |||
Sbjct: 21103524 atgggaggaagcgaatacgatgatgactgggagttgcctagcgctgacatcactgtagtt 21103583

                                                                            
Query: 281      cttgttggaaaacttggctatggcaagagtgcaactggcaatagtatccttggacgggaa 340
                |||   || |||||||||| ||||||||| |||||||||||||| ||| ||||| | |||
Sbjct: 21103584 ctttgcggcaaacttggctgtggcaagagcgcaactggcaatagcatcgttggaagagaa 21103643

                                                                            
Query: 341      gcatttgtatcagaatactctcatgctagtgtgancaatacttgtcagatgggaagcacc 400
                |||||||||||||| ||||| ||||||||||||| || |||||||||  |||  ||||||
Sbjct: 21103644 gcatttgtatcagagtactcccatgctagtgtgaccagtacttgtcaattggccagcacc 21103703

                                                            
Query: 401      atgctgacggatggccgcaccatcaatgttattgatacaccagg 444
                  ||| | ||||||||| ||| |||||||||||||||| |||||
Sbjct: 21103704 gcgctaaaggatggccgtaccctcaatgttattgatacgccagg 21103747
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>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score =  168 bits (85), Expect = 1e-38
 Identities = 189/224 (84%)
 Strand = Plus / Plus

                                                                         
Query: 221   atgggtggaagcaactatgatgacgactgggtgttgcccagtgctgacatcactcttgtt 280
             ||||| |||||| | || ||||| ||||||| |||||| || |||||||||||| | |||
Sbjct: 10240 atgggaggaagcgaatacgatgatgactgggagttgcctagcgctgacatcactgtagtt 10299

                                                                         
Query: 281   cttgttggaaaacttggctatggcaagagtgcaactggcaatagtatccttggacgggaa 340
             |||   || |||||||||| ||||||||| |||||||||||||| ||| ||||| | |||
Sbjct: 10300 ctttgcggcaaacttggctgtggcaagagcgcaactggcaatagcatcgttggaagagaa 10359

                                                                         
Query: 341   gcatttgtatcagaatactctcatgctagtgtgancaatacttgtcagatgggaagcacc 400
             |||||||||||||| ||||| ||||||||||||| || |||||||||  |||  ||||||
Sbjct: 10360 gcatttgtatcagagtactcccatgctagtgtgaccagtacttgtcaattggccagcacc 10419

                                                         
Query: 401   atgctgacggatggccgcaccatcaatgttattgatacaccagg 444
               ||| | ||||||||| ||| |||||||||||||||| |||||
Sbjct: 10420 gcgctaaaggatggccgtaccctcaatgttattgatacgccagg 10463
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1008_F08
          Length = 105979

 Score =  168 bits (85), Expect = 1e-38
 Identities = 189/224 (84%)
 Strand = Plus / Plus

                                                                          
Query: 221    atgggtggaagcaactatgatgacgactgggtgttgcccagtgctgacatcactcttgtt 280
              ||||| |||||| | || ||||| ||||||| |||||| || |||||||||||| | |||
Sbjct: 105269 atgggaggaagcgaatacgatgatgactgggagttgcctagcgctgacatcactgtagtt 105328

                                                                          
Query: 281    cttgttggaaaacttggctatggcaagagtgcaactggcaatagtatccttggacgggaa 340
              |||   || |||||||||| ||||||||| |||||||||||||| ||| ||||| | |||
Sbjct: 105329 ctttgcggcaaacttggctgtggcaagagcgcaactggcaatagcatcgttggaagagaa 105388

                                                                          
Query: 341    gcatttgtatcagaatactctcatgctagtgtgancaatacttgtcagatgggaagcacc 400
              |||||||||||||| ||||| ||||||||||||| || |||||||||  |||  ||||||
Sbjct: 105389 gcatttgtatcagagtactcccatgctagtgtgaccagtacttgtcaattggccagcacc 105448

                                                          
Query: 401    atgctgacggatggccgcaccatcaatgttattgatacaccagg 444
                ||| | ||||||||| ||| |||||||||||||||| |||||
Sbjct: 105449 gcgctaaaggatggccgtaccctcaatgttattgatacgccagg 105492
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>ref|NM_195439.1| Oryza sativa (japonica cultivar-group) putative DNA binding protein
           (OSJNBa0004P12.12), mRNA
          Length = 1854

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  cacctcctcctcctcgccaac 55
           |||||||||||||||||||||
Sbjct: 282 cacctcctcctcctcgccaac 262
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>emb|X80224.1|SCYBR1212 S.cerevisiae CDC28, YBR1212, and YBR1213 genes
          Length = 5653

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  tcttgttcttgttggaaaact 294
            |||||||||||||||||||||
Sbjct: 4069 tcttgttcttgttggaaaact 4049
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>ref|NM_005934.3| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 1 (MLLT1), mRNA
          Length = 4530

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 29   gccccgcacctcctcctcctc 49
            |||||||||||||||||||||
Sbjct: 1109 gccccgcacctcctcctcctc 1129
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>gb|AC099040.10| Oryza sativa chromosome 10 BAC OSJNBa0004P12 genomic sequence, complete
             sequence
          Length = 137029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    cacctcctcctcctcgccaac 55
             |||||||||||||||||||||
Sbjct: 76332 cacctcctcctcctcgccaac 76312
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      cacctcctcctcctcgccaac 55
               |||||||||||||||||||||
Sbjct: 7008181 cacctcctcctcctcgccaac 7008161
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>gb|AC011471.6|AC011471 Homo sapiens chromosome 19 clone CTC-503J8, complete sequence
          Length = 154702

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    gccccgcacctcctcctcctc 49
             |||||||||||||||||||||
Sbjct: 86116 gccccgcacctcctcctcctc 86096
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>dbj|AK064659.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H04, full
           insert sequence
          Length = 2162

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  cacctcctcctcctcgccaac 55
           |||||||||||||||||||||
Sbjct: 362 cacctcctcctcctcgccaac 342
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>emb|Z36031.1|SCYBR162C S.cerevisiae chromosome II reading frame ORF YBR162c
          Length = 2961

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 274 tcttgttcttgttggaaaact 294
           |||||||||||||||||||||
Sbjct: 726 tcttgttcttgttggaaaact 706
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>gb|DQ331222.1| Synthetic construct Saccharomyces cerevisiae clone FLH201814.01X TOS1
            gene, complete sequence
          Length = 1368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 274  tcttgttcttgttggaaaact 294
            |||||||||||||||||||||
Sbjct: 1084 tcttgttcttgttggaaaact 1104
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      cacctcctcctcctcgccaac 55
               |||||||||||||||||||||
Sbjct: 7011467 cacctcctcctcctcgccaac 7011447
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>gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complete sequence
          Length = 199358

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    agttccaaaataaaaagaagc 30
             |||||||||||||||||||||
Sbjct: 92336 agttccaaaataaaaagaagc 92356
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>gb|L04285.1|HUMENL Human germline ENL mRNA, complete cds
          Length = 1680

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 29  gccccgcacctcctcctcctc 49
           |||||||||||||||||||||
Sbjct: 945 gccccgcacctcctcctcctc 965
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>dbj|D14539.1|HUMLTG19 Human mRNA for LTG19
          Length = 1974

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 29   gccccgcacctcctcctcctc 49
            |||||||||||||||||||||
Sbjct: 1109 gccccgcacctcctcctcctc 1129
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    attgatacaccaggattatt 450
              ||||||||||||||||||||
Sbjct: 817577 attgatacaccaggattatt 817558
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>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
              complete sequence
          Length = 146712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     atcgccgccgcagacgcagccgcc 94
              ||||||||||||| ||||||||||
Sbjct: 128440 atcgccgccgcagccgcagccgcc 128417
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>gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosome 12, complete
             sequence
          Length = 204825

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     gggaactcagttccaaaataaaaa 25
             |||||||||| |||||||||||||
Sbjct: 57016 gggaactcaggtccaaaataaaaa 57039
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
           complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 71  atcgccgccgcagacgcagccgcc 94
           ||||||||||||| ||||||||||
Sbjct: 205 atcgccgccgcagccgcagccgcc 182
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>ref|XM_426973.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 0610012A05
           (LOC429417), partial mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  cccgcacctcctcctcctcg 50
           ||||||||||||||||||||
Sbjct: 520 cccgcacctcctcctcctcg 501
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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 410  gatggccgcaccatcaatgt 429
            ||||||||||||||||||||
Sbjct: 9148 gatggccgcaccatcaatgt 9129
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>gb|AC154903.4| Mus musculus BAC clone RP23-414E24 from chromosome 12, complete
             sequence
          Length = 201338

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     gggaactcagttccaaaataaaaa 25
             |||||||||| |||||||||||||
Sbjct: 36319 gggaactcaggtccaaaataaaaa 36296
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>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence
          Length = 154695

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 274   tcttgttcttgttggaaaacttgg 297
             |||||||||| |||||||||||||
Sbjct: 67966 tcttgttctttttggaaaacttgg 67989
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>gb|AY123844.1| Sorghum bicolor glutamate/malate translocator (DiT1) mRNA, complete
           cds; nuclear gene for plastid product
          Length = 2088

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  ccccgcacctcctcctcctc 49
           ||||||||||||||||||||
Sbjct: 136 ccccgcacctcctcctcctc 155
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>ref|XM_969890.1| PREDICTED: Tribolium castaneum similar to CG7937-PA (LOC663858),
           mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  aaagaagccccgcacctcct 42
           ||||||||||||||||||||
Sbjct: 504 aaagaagccccgcacctcct 523
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       ccccgcacctcctcctcctc 49
                ||||||||||||||||||||
Sbjct: 22271660 ccccgcacctcctcctcctc 22271641
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 71       atcgccgccgcagacgcagccgcc 94
                ||||||||||||| ||||||||||
Sbjct: 25265599 atcgccgccgcagccgcagccgcc 25265576
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>gb|AC079130.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446E21, complete
              sequence
          Length = 190587

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aactcagttccaaaataaaa 24
              ||||||||||||||||||||
Sbjct: 164861 aactcagttccaaaataaaa 164880
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     cctccttccgcctgctgctg 139
               ||||||||||||||||||||
Sbjct: 1140382 cctccttccgcctgctgctg 1140401
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>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    atccctccttccgcctgctgctgc 140
              |||||||| |||||||||||||||
Sbjct: 107707 atccctccgtccgcctgctgctgc 107684
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     cgccgccgcagacgcagccg 92
              ||||||||||||||||||||
Sbjct: 695254 cgccgccgcagacgcagccg 695235
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       ccccgcacctcctcctcctc 49
                ||||||||||||||||||||
Sbjct: 22200005 ccccgcacctcctcctcctc 22199986
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>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109610

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ccccgcacctcctcctcctc 49
             ||||||||||||||||||||
Sbjct: 90094 ccccgcacctcctcctcctc 90113
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>emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chromosome 3, complete
             sequence
          Length = 249405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 178   gataaattttcctgccgtcactca 201
             ||||||| ||||||||||||||||
Sbjct: 18382 gataaatcttcctgccgtcactca 18405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,946,389
Number of Sequences: 3902068
Number of extensions: 4946389
Number of successful extensions: 111261
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110739
Number of HSP's gapped (non-prelim): 522
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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