ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YNB2_SCHPO (Q9USS8) Hypothetical protein C4.02c in chromosome II 28 7.4

>YNB2_SCHPO (Q9USS8) Hypothetical protein C4.02c in chromosome II|
          Length = 456

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 121 EIGWYGWSRRRGRAPALAWTLRSTARAECP*QVRVLRNF 5
           EIG  G  + +  AP+  W LR+  R EC   +R  R +
Sbjct: 392 EIGDIGAQQWKTLAPSERWILRTNIRKECTYDIRYKRPY 430


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.122    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,236,320
Number of Sequences: 219361
Number of extensions: 147543
Number of successful extensions: 405
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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