ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl17e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_363444.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 2.7
2ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 2.7

>ref|XM_363444.1| Magnaporthe grisea 70-15 hypothetical protein (MG01370.4) partial
           mRNA
          Length = 2184

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 acacgccgtggccgtcgagc 192
           ||||||||||||||||||||
Sbjct: 943 acacgccgtggccgtcgagc 924



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>ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9320.2), mRNA
          Length = 3165

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  ctggccgtccgccctggtcc 136
            ||||||||||||||||||||
Sbjct: 2580 ctggccgtccgccctggtcc 2599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,086,110
Number of Sequences: 3902068
Number of extensions: 1086110
Number of successful extensions: 86612
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86610
Number of HSP's gapped (non-prelim): 2
length of query: 213
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 191
effective length of database: 17,147,199,772
effective search space: 3275115156452
effective search space used: 3275115156452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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