ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
2dbj|AK100415.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 210 3e-51
4gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 210 3e-51
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
6gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 210 3e-51
7dbj|AK100436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
8dbj|AK066259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 125 1e-25
11emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb... 125 1e-25
12dbj|AK107528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 6e-22
13gb|AY022751.1| Oryza sativa microsatellite MRG5076 containing (C... 105 1e-19
14gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence 96 1e-16
15gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence 96 1e-16
16gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare str... 72 2e-09
17ref|NM_102542.1| Arabidopsis thaliana ACA1; calmodulin binding A... 46 0.11
18ref|NM_179385.1| Arabidopsis thaliana ACA1; calcium-transporting... 46 0.11
19ref|XM_365275.1| Magnaporthe grisea 70-15 hypothetical protein (... 46 0.11
20emb|X69941.1|CHATACA1B A.thaliana chloroplast ACA1 mRNA encoding... 46 0.11
21emb|X69940.1|CHATACA1A A.thaliana chloroplast ACA1 mRNA encoding... 46 0.11
22gb|AC079280.4|AC079280 Arabidopsis thaliana chromosome 1 BAC F28... 46 0.11
23gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana... 46 0.11
24dbj|D13984.1|ATHDCECAA Arabidopsis thaliana ACA1 gene for chloro... 46 0.11
25dbj|D13983.1|ATHRCECAA Arabidopsis thaliana mRNA for chloroplast... 46 0.11
26dbj|AK121511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
27dbj|AK065165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
28gb|L08469.1|ATHARAB2TH Arabidopsis thaliana envelope Ca2+-ATPase... 46 0.11
29gb|L08468.1|ATHARAB1TH Arabidopsis thaliana envelope Ca2+-ATPase... 46 0.11
30emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.11
31ref|NM_184974.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
32ref|NM_183735.1| Oryza sativa (japonica cultivar-group), predic... 44 0.44
33emb|AL441927.10| Human DNA sequence from clone RP1-294P19 on chr... 44 0.44
34gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 44 0.44
35gb|DQ056263.1| Sinojackia xylocarpa clone Sx149 microsatellite s... 44 0.44
36gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 44 0.44
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
38dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
39emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116... 44 0.44
40ref|NM_197255.1| Oryza sativa (japonica cultivar-group) hypothet... 42 1.7
41gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
42gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
43emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A1... 42 1.7
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
47dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
48dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
49gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
50emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4,... 42 1.7
51gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.9
52ref|XM_981750.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.9
53ref|XM_974939.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.9
54ref|XM_571340.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.9
55gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.9
56emb|CR547127.14| Mouse DNA sequence from clone CH25-592M6 on chr... 40 6.9
57emb|CR548624.2| Mouse DNA sequence from clone CH25-423E5 on chro... 40 6.9
58dbj|AK172326.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.9
59gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.9
60gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, compl... 40 6.9
61gb|AC149577.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 6.9
62gb|AC157213.2| Mus musculus BAC clone RP23-157N5 from chromosome... 40 6.9
63dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
64dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
65dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.9
66gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 6.9
67gb|AF061245.1|AF061245 Sinorhizobium fredii glucosyl transferase... 40 6.9
68dbj|AP004523.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.9 
>dbj|AK121250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101G05, full
           insert sequence
          Length = 3548

 Score =  281 bits (142), Expect = 1e-72
 Identities = 218/242 (90%), Gaps = 1/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||||| || ||||| ||||| || || ||| | ||||||||||| ||||||
Sbjct: 63  atggagagctacctgaaggagaatttcggcggggtgaaggcgaagcactcgtcggacgag 122

                                                                       
Query: 325 gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
           |||||||| |||||||||| | | |||||||||||||||||||||||||| || ||||||
Sbjct: 123 gcgctggggcgatggcgcaggttggtcggcgtcgtcaagaaccccaagcggcggttccgc 182

                                                                       
Query: 385 ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccaggag 444
           |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 183 ttcaccgccaacctcgacaagcgatccgaggccgccgccatgaagcgatccaaccaggag 242

                                                                       
Query: 445 aagctgcgtgttgctgtgcttgtttc-aaggctgcacttcagttcatccatggtcttgct 503
           |||||||| ||||||||||| || || ||||||||||||||||||||||| || ||||||
Sbjct: 243 aagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatccaaggacttgct 302

             
Query: 504 cc 505
           ||
Sbjct: 303 cc 304
to top
>dbj|AK100415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M18, full
           insert sequence
          Length = 3726

 Score =  281 bits (142), Expect = 1e-72
 Identities = 218/242 (90%), Gaps = 1/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||||| || ||||| ||||| || || ||| | ||||||||||| ||||||
Sbjct: 381 atggagagctacctgaaggagaatttcggcggggtgaaggcgaagcactcgtcggacgag 440

                                                                       
Query: 325 gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
           |||||||| |||||||||| | | |||||||||||||||||||||||||| || ||||||
Sbjct: 441 gcgctggggcgatggcgcaggttggtcggcgtcgtcaagaaccccaagcggcggttccgc 500

                                                                       
Query: 385 ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccaggag 444
           |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 501 ttcaccgccaacctcgacaagcgatccgaggccgccgccatgaagcgatccaaccaggag 560

                                                                       
Query: 445 aagctgcgtgttgctgtgcttgtttc-aaggctgcacttcagttcatccatggtcttgct 503
           |||||||| ||||||||||| || || ||||||||||||||||||||||| || ||||||
Sbjct: 561 aagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatccaaggacttgct 620

             
Query: 504 cc 505
           ||
Sbjct: 621 cc 622
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  210 bits (106), Expect = 3e-51
 Identities = 160/178 (89%)
 Strand = Plus / Plus

                                                                           
Query: 265     atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
               |||||||||||||| || ||||| ||||| || || ||| | ||||||||||| ||||||
Sbjct: 5402574 atggagagctacctgaaggagaatttcggcggggtgaaggcgaagcactcgtcggacgag 5402633

                                                                           
Query: 325     gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
               |||||||| |||||||||| | | |||||||||||||||||||||||||| || ||||||
Sbjct: 5402634 gcgctggggcgatggcgcaggttggtcggcgtcgtcaagaaccccaagcggcggttccgc 5402693

                                                                         
Query: 385     ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccagg 442
               |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 5402694 ttcaccgccaacctcgacaagcgatccgaggccgccgccatgaagcgatccaaccagg 5402751



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 52/56 (92%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                       
Query: 439     caggagaagctgcgtgttgctgtgcttgtttcaa-ggctgcacttcagttcatcca 493
               |||||||||||||| ||||||||||| || |||| |||||||||||||||||||||
Sbjct: 5404296 caggagaagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatcca 5404351



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 344      aggtcgtcggcgtcgtcaagaa 365
                ||||||||||||||||||||||
Sbjct: 31958823 aggtcgtcggcgtcgtcaagaa 31958802
to top
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score =  210 bits (106), Expect = 3e-51
 Identities = 160/178 (89%)
 Strand = Plus / Plus

                                                                          
Query: 265    atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
              |||||||||||||| || ||||| ||||| || || ||| | ||||||||||| ||||||
Sbjct: 108742 atggagagctacctgaaggagaatttcggcggggtgaaggcgaagcactcgtcggacgag 108801

                                                                          
Query: 325    gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
              |||||||| |||||||||| | | |||||||||||||||||||||||||| || ||||||
Sbjct: 108802 gcgctggggcgatggcgcaggttggtcggcgtcgtcaagaaccccaagcggcggttccgc 108861

                                                                        
Query: 385    ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccagg 442
              |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 108862 ttcaccgccaacctcgacaagcgatccgaggccgccgccatgaagcgatccaaccagg 108919



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 52/56 (92%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                      
Query: 439    caggagaagctgcgtgttgctgtgcttgtttcaa-ggctgcacttcagttcatcca 493
              |||||||||||||| ||||||||||| || |||| |||||||||||||||||||||
Sbjct: 110464 caggagaagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatcca 110519
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  210 bits (106), Expect = 3e-51
 Identities = 160/178 (89%)
 Strand = Plus / Plus

                                                                           
Query: 265     atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
               |||||||||||||| || ||||| ||||| || || ||| | ||||||||||| ||||||
Sbjct: 5401789 atggagagctacctgaaggagaatttcggcggggtgaaggcgaagcactcgtcggacgag 5401848

                                                                           
Query: 325     gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
               |||||||| |||||||||| | | |||||||||||||||||||||||||| || ||||||
Sbjct: 5401849 gcgctggggcgatggcgcaggttggtcggcgtcgtcaagaaccccaagcggcggttccgc 5401908

                                                                         
Query: 385     ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccagg 442
               |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 5401909 ttcaccgccaacctcgacaagcgatccgaggccgccgccatgaagcgatccaaccagg 5401966



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 52/56 (92%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                       
Query: 439     caggagaagctgcgtgttgctgtgcttgtttcaa-ggctgcacttcagttcatcca 493
               |||||||||||||| ||||||||||| || |||| |||||||||||||||||||||
Sbjct: 5403511 caggagaagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatcca 5403566



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 344      aggtcgtcggcgtcgtcaagaa 365
                ||||||||||||||||||||||
Sbjct: 32049335 aggtcgtcggcgtcgtcaagaa 32049314
to top
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09,
              complete sequence
          Length = 153950

 Score =  210 bits (106), Expect = 3e-51
 Identities = 160/178 (89%)
 Strand = Plus / Plus

                                                                          
Query: 265    atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
              |||||||||||||| || ||||| ||||| || || ||| | ||||||||||| ||||||
Sbjct: 132356 atggagagctacctgaaggagaatttcggcggggtgaaggcgaagcactcgtcggacgag 132415

                                                                          
Query: 325    gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
              |||||||| |||||||||| | | |||||||||||||||||||||||||| || ||||||
Sbjct: 132416 gcgctggggcgatggcgcaggttggtcggcgtcgtcaagaaccccaagcggcggttccgc 132475

                                                                        
Query: 385    ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccagg 442
              |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 132476 ttcaccgccaacctcgacaagcgatccgaggccgccgccatgaagcgatccaaccagg 132533



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 52/56 (92%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                      
Query: 439    caggagaagctgcgtgttgctgtgcttgtttcaa-ggctgcacttcagttcatcca 493
              |||||||||||||| ||||||||||| || |||| |||||||||||||||||||||
Sbjct: 134115 caggagaagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatcca 134170
to top
>dbj|AK100436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088M17, full
           insert sequence
          Length = 2965

 Score =  129 bits (65), Expect = 1e-26
 Identities = 195/237 (82%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           ||||||||||||||  | ||||| ||||| || || ||| | ||| ||||||| || |||
Sbjct: 263 atggagagctacctggaggagaatttcggcggggtgaaggcgaagaactcgtcggaggag 322

                                                                       
Query: 325 gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
           |||||  | || ||||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 323 gcgctccggcggtggcgcaagctctgcggcgtcgtcaagaaccccaagcgccgcttccgc 382

                                                                       
Query: 385 ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccaggag 444
           |||||||||||||||| ||||||   |||||||   ||||| ||||   ||||||| |||
Sbjct: 383 ttcaccgccaacctcgacaagcgcggcgaggcccaggccatcaagcacgccaaccacgag 442

                                                                    
Query: 445 aagctgcgtgttgctgtgcttgtttc-aaggctgcacttcagttcatccatggtctt 500
           || ||||| ||||| ||||| || || || |||||||| ||||| || || ||||||
Sbjct: 443 aaactgcgggttgcggtgctggtatcgaaagctgcactacagtttatacagggtctt 499
to top
>dbj|AK066259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H11, full
           insert sequence
          Length = 3668

 Score =  129 bits (65), Expect = 1e-26
 Identities = 195/237 (82%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           ||||||||||||||  | ||||| ||||| || || ||| | ||| ||||||| || |||
Sbjct: 280 atggagagctacctggaggagaatttcggcggggtgaaggcgaagaactcgtcggaggag 339

                                                                       
Query: 325 gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
           |||||  | || ||||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 340 gcgctccggcggtggcgcaagctctgcggcgtcgtcaagaaccccaagcgccgcttccgc 399

                                                                       
Query: 385 ttcaccgccaacctcggcaagcgatccgaggccgccgccatgaagcggaccaaccaggag 444
           |||||||||||||||| ||||||   |||||||   ||||| ||||   ||||||| |||
Sbjct: 400 ttcaccgccaacctcgacaagcgcggcgaggcccaggccatcaagcacgccaaccacgag 459

                                                                    
Query: 445 aagctgcgtgttgctgtgcttgtttc-aaggctgcacttcagttcatccatggtctt 500
           || ||||| ||||| ||||| || || || |||||||| ||||| || || ||||||
Sbjct: 460 aaactgcgggttgcggtgctggtatcgaaagctgcactacagtttatacagggtctt 516
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  125 bits (63), Expect = 1e-25
 Identities = 123/143 (86%)
 Strand = Plus / Plus

                                                                            
Query: 265      atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
                ||||||||||||||  | ||||| ||||| || || ||| | ||| ||||||| || |||
Sbjct: 24519204 atggagagctacctggaggagaatttcggcggggtgaaggcgaagaactcgtcggaggag 24519263

                                                                            
Query: 325      gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
                |||||  | || ||||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 24519264 gcgctccggcggtggcgcaagctctgcggcgtcgtcaagaaccccaagcgccgcttccgc 24519323

                                       
Query: 385      ttcaccgccaacctcggcaagcg 407
                |||||||||||||||| ||||||
Sbjct: 24519324 ttcaccgccaacctcgacaagcg 24519346



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 257      cgcccgccatggagagctacctcaacg 283
                ||||||||| |||||||||||||||||
Sbjct: 25610471 cgcccgccagggagagctacctcaacg 25610497



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 344      aggtcgtcggcgtcgtcaagaa 365
                ||||||||||||||||||||||
Sbjct: 20268375 aggtcgtcggcgtcgtcaagaa 20268354
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  125 bits (63), Expect = 1e-25
 Identities = 123/143 (86%)
 Strand = Plus / Plus

                                                                            
Query: 265      atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
                ||||||||||||||  | ||||| ||||| || || ||| | ||| ||||||| || |||
Sbjct: 24447410 atggagagctacctggaggagaatttcggcggggtgaaggcgaagaactcgtcggaggag 24447469

                                                                            
Query: 325      gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
                |||||  | || ||||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 24447470 gcgctccggcggtggcgcaagctctgcggcgtcgtcaagaaccccaagcgccgcttccgc 24447529

                                       
Query: 385      ttcaccgccaacctcggcaagcg 407
                |||||||||||||||| ||||||
Sbjct: 24447530 ttcaccgccaacctcgacaagcg 24447552



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 257      cgcccgccatggagagctacctcaacg 283
                ||||||||| |||||||||||||||||
Sbjct: 25538647 cgcccgccagggagagctacctcaacg 25538673



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 344      aggtcgtcggcgtcgtcaagaa 365
                ||||||||||||||||||||||
Sbjct: 20194589 aggtcgtcggcgtcgtcaagaa 20194568
to top
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120071

 Score =  125 bits (63), Expect = 1e-25
 Identities = 123/143 (86%)
 Strand = Plus / Plus

                                                                         
Query: 265   atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
             ||||||||||||||  | ||||| ||||| || || ||| | ||| ||||||| || |||
Sbjct: 90235 atggagagctacctggaggagaatttcggcggggtgaaggcgaagaactcgtcggaggag 90294

                                                                         
Query: 325   gcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaaccccaagcgccgcttccgc 384
             |||||  | || ||||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 90295 gcgctccggcggtggcgcaagctctgcggcgtcgtcaagaaccccaagcgccgcttccgc 90354

                                    
Query: 385   ttcaccgccaacctcggcaagcg 407
             |||||||||||||||| ||||||
Sbjct: 90355 ttcaccgccaacctcgacaagcg 90377
to top
>dbj|AK107528.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G06, full
           insert sequence
          Length = 597

 Score =  113 bits (57), Expect = 6e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                       
Query: 311 actcgtccgacgaggcgctgggccgatggcgcaaggtcgtcggcgtcgtcaagaacccca 370
           ||||||| || ||||||||  | || ||||||||| ||  ||||||||||||||||||||
Sbjct: 294 actcgtcggaggaggcgctccggcggtggcgcaagctctgcggcgtcgtcaagaacccca 235

                                                
Query: 371 agcgccgcttccgcttcaccgccaacctcggcaagcg 407
           |||||||||||||||||||||||||||||| ||||||
Sbjct: 234 agcgccgcttccgcttcaccgccaacctcgacaagcg 198
to top
>gb|AY022751.1| Oryza sativa microsatellite MRG5076 containing (CCT)X8, closest to
           marker G148, genomic sequence
          Length = 224

 Score =  105 bits (53), Expect = 1e-19
 Identities = 56/57 (98%)
 Strand = Plus / Plus

                                                                    
Query: 351 cggcgtcgtcaagaaccccaagcgccgcttccgcttcaccgccaacctcggcaagcg 407
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4   cggcgtcgtcaagaaccccaagcgccgcttccgcttcaccgccaacctcgacaagcg 60
to top
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                            
Query: 353  gcgtcgtcaagaaccccaagcgccgcttccgcttcaccgccaacctcg 400
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6707 gcgtcgtcaagaaccccaagcgccgcttccgcttcaccgccaacctcg 6754



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 44/50 (88%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                              
Query: 439  caggagaagctgcgtgttgctgtgcttgtttc-aaggctgcacttcagtt 487
            |||||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 7574 caggagaagctgcgcgtcgctgtgctcgtctcaaaggctgcactgcagtt 7623
to top
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence
          Length = 103167

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                             
Query: 353   gcgtcgtcaagaaccccaagcgccgcttccgcttcaccgccaacctcg 400
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85964 gcgtcgtcaagaaccccaagcgccgcttccgcttcaccgccaacctcg 86011



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 44/50 (88%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                               
Query: 439   caggagaagctgcgtgttgctgtgcttgtttc-aaggctgcacttcagtt 487
             |||||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 86830 caggagaagctgcgcgtcgctgtgctcgtctcaaaggctgcactgcagtt 86879
to top
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
           OJ1345H02, from chromosome 3, complete sequence
          Length = 145290

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 52/56 (92%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                   
Query: 439 caggagaagctgcgtgttgctgtgcttgtttcaa-ggctgcacttcagttcatcca 493
           |||||||||||||| ||||||||||| || |||| |||||||||||||||||||||
Sbjct: 890 caggagaagctgcgagttgctgtgctagtgtcaaaggctgcacttcagttcatcca 945
to top
>ref|NM_102542.1| Arabidopsis thaliana ACA1; calmodulin binding AT1G27770 (ACA1)
           transcript variant AT1G27770.2 mRNA, complete cds
          Length = 3262

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 148 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 207

              
Query: 325 gcg 327
           |||
Sbjct: 208 gcg 210
to top
>ref|NM_179385.1| Arabidopsis thaliana ACA1; calcium-transporting ATPase/ calmodulin
           binding AT1G27770 (ACA1) transcript variant AT1G27770.1
           mRNA, complete cds
          Length = 3484

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 148 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 207

              
Query: 325 gcg 327
           |||
Sbjct: 208 gcg 210
to top
>ref|XM_365275.1| Magnaporthe grisea 70-15 hypothetical protein (MG01977.4) partial
           mRNA
          Length = 1536

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 296 gcgtcaagcccaagcactcgtccgacg 322
           ||||||||||||||||| |||||||||
Sbjct: 317 gcgtcaagcccaagcacacgtccgacg 343
to top
>emb|X69941.1|CHATACA1B A.thaliana chloroplast ACA1 mRNA encoding envelope Ca2+-ATPase
          Length = 3262

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 148 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 207

              
Query: 325 gcg 327
           |||
Sbjct: 208 gcg 210
to top
>emb|X69940.1|CHATACA1A A.thaliana chloroplast ACA1 mRNA encoding envelope Ca2+-ATPase
          Length = 4667

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 367 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 426

              
Query: 325 gcg 327
           |||
Sbjct: 427 gcg 429
to top
>gb|AC079280.4|AC079280 Arabidopsis thaliana chromosome 1 BAC F28L5 genomic sequence,
            complete sequence
          Length = 48404

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 265  atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
            |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 5065 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 5006

               
Query: 325  gcg 327
            |||
Sbjct: 5005 gcg 5003
to top
>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I,
             complete sequence
          Length = 106753

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 265   atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
             |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 87993 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 87934

                
Query: 325   gcg 327
             |||
Sbjct: 87933 gcg 87931
to top
>dbj|D13984.1|ATHDCECAA Arabidopsis thaliana ACA1 gene for chloroplast envelope
           Ca2+-ATPase, complete cds
          Length = 4667

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 367 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 426

              
Query: 325 gcg 327
           |||
Sbjct: 427 gcg 429
to top
>dbj|D13983.1|ATHRCECAA Arabidopsis thaliana mRNA for chloroplast envelope Ca2+-ATPase,
           complete cds
          Length = 3262

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 148 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 207

              
Query: 325 gcg 327
           |||
Sbjct: 208 gcg 210
to top
>dbj|AK121511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023O13, full
           insert sequence
          Length = 2610

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 257 cgcccgccatggagagctacctcaacg 283
           ||||||||| |||||||||||||||||
Sbjct: 380 cgcccgccagggagagctacctcaacg 406
to top
>dbj|AK065165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C11, full
           insert sequence
          Length = 2692

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 257 cgcccgccatggagagctacctcaacg 283
           ||||||||| |||||||||||||||||
Sbjct: 304 cgcccgccagggagagctacctcaacg 330
to top
>gb|L08469.1|ATHARAB2TH Arabidopsis thaliana envelope Ca2+-ATPase (PEA1) gene, chloroplast
           gene encoding chloroplast protein, complete cds
          Length = 4888

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 366 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 425

              
Query: 325 gcg 327
           |||
Sbjct: 426 gcg 428
to top
>gb|L08468.1|ATHARAB1TH Arabidopsis thaliana envelope Ca2+-ATPase (PEA1) mRNA, chloroplast
           gene encoding chloroplast protein, complete cds
          Length = 3484

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 265 atggagagctacctcaacgagaacttcgggggcgtcaagcccaagcactcgtccgacgag 324
           |||||||||||| | ||||| |||||||| |  || ||||| ||| |||||||||| |||
Sbjct: 148 atggagagctacttgaacgaaaacttcggcgatgtgaagccgaagaactcgtccgatgag 207

              
Query: 325 gcg 327
           |||
Sbjct: 208 gcg 210
to top
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 257   cgcccgccatggagagctacctcaacg 283
             ||||||||| |||||||||||||||||
Sbjct: 63247 cgcccgccagggagagctacctcaacg 63221
to top
>ref|NM_184974.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 801

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 344 aggtcgtcggcgtcgtcaagaa 365
           ||||||||||||||||||||||
Sbjct: 680 aggtcgtcggcgtcgtcaagaa 659
to top
>ref|NM_183735.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 344 aggtcgtcggcgtcgtcaagaa 365
           ||||||||||||||||||||||
Sbjct: 554 aggtcgtcggcgtcgtcaagaa 575
to top
>emb|AL441927.10| Human DNA sequence from clone RP1-294P19 on chromosome 6, complete
             sequence
          Length = 67605

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 225   ggagaggagggacggcaggagagcagcagg 254
             ||||| |||||| |||||||||||||||||
Sbjct: 37667 ggagatgagggagggcaggagagcagcagg 37696
to top
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 344   aggtcgtcggcgtcgtcaagaa 365
             ||||||||||||||||||||||
Sbjct: 50775 aggtcgtcggcgtcgtcaagaa 50754
to top
>gb|DQ056263.1| Sinojackia xylocarpa clone Sx149 microsatellite sequence
          Length = 412

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 361 aagaaccccaagcgccgcttccgcttcaccgccaacctcggcaagcgatccgaggccgcc 420
           ||||||||||||||| | ||||| ||||| ||  | |||  |||||| | ||||||||||
Sbjct: 177 aagaaccccaagcgcaggttccgattcacagcagatctctccaagcgctacgaggccgcc 236

                 
Query: 421 gccatg 426
           ||||||
Sbjct: 237 gccatg 242
to top
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
               complete sequence
          Length = 1466886

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 244     agagcagcagggacgcccgcca 265
               ||||||||||||||||||||||
Sbjct: 1341677 agagcagcagggacgcccgcca 1341656
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 344      aggtcgtcggcgtcgtcaagaa 365
                ||||||||||||||||||||||
Sbjct: 11927963 aggtcgtcggcgtcgtcaagaa 11927942



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 474      gctgcacttcagttcatccatggt 497
                |||||||||||||||||| |||||
Sbjct: 41215189 gctgcacttcagttcatcgatggt 41215212
to top
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1012D10
          Length = 168267

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 344    aggtcgtcggcgtcgtcaagaa 365
              ||||||||||||||||||||||
Sbjct: 140248 aggtcgtcggcgtcgtcaagaa 140227
to top
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152862

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 344    aggtcgtcggcgtcgtcaagaa 365
              ||||||||||||||||||||||
Sbjct: 132609 aggtcgtcggcgtcgtcaagaa 132588
to top
>ref|NM_197255.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0062C05.30), mRNA
          Length = 1695

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 396 cctcggcaagcgatccgaggccgcc 420
           ||||||||||| |||||||||||||
Sbjct: 669 cctcggcaagccatccgaggccgcc 645
to top
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 396    cctcggcaagcgatccgaggccgcc 420
              ||||||||||| |||||||||||||
Sbjct: 145830 cctcggcaagccatccgaggccgcc 145806
to top
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
             complete sequence
          Length = 121466

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 268   gagagctacctcaacgagaacttcg 292
             |||||||||||||||||| ||||||
Sbjct: 88281 gagagctacctcaacgagtacttcg 88305
to top
>emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A17 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 105104

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   ggtggagaggagggacggcag 242
             |||||||||||||||||||||
Sbjct: 67560 ggtggagaggagggacggcag 67540
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 396      cctcggcaagcgatccgaggccgcc 420
                ||||||||||| |||||||||||||
Sbjct: 26080584 cctcggcaagccatccgaggccgcc 26080560
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 396      cctcggcaagcgatccgaggccgcc 420
                ||||||||||| |||||||||||||
Sbjct: 18848094 cctcggcaagccatccgaggccgcc 18848070
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 216     ggagttggtggagaggaggga 236
               |||||||||||||||||||||
Sbjct: 4977644 ggagttggtggagaggaggga 4977624
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 268      gagagctacctcaacgagaacttcg 292
                |||||||||||||||||| ||||||
Sbjct: 24202043 gagagctacctcaacgagtacttcg 24202067
to top
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   ggagttggtggagaggaggga 236
             |||||||||||||||||||||
Sbjct: 19333 ggagttggtggagaggaggga 19313
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 396      cctcggcaagcgatccgaggccgcc 420
                ||||||||||| |||||||||||||
Sbjct: 18859348 cctcggcaagccatccgaggccgcc 18859324
to top
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 396    cctcggcaagcgatccgaggccgcc 420
              ||||||||||| |||||||||||||
Sbjct: 114911 cctcggcaagccatccgaggccgcc 114887
to top
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     tcaagcccaagcactcgtcc 318
               ||||||||||||||||||||
Sbjct: 1119396 tcaagcccaagcactcgtcc 1119377
to top
>ref|XM_981750.1| PREDICTED: Mus musculus hypothetical protein LOC544864 (LOC544864),
           mRNA
          Length = 3627

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 ggtctgaggagccgcgtgct 202
           ||||||||||||||||||||
Sbjct: 622 ggtctgaggagccgcgtgct 603
to top
>ref|XM_974939.1| PREDICTED: Mus musculus hypothetical protein LOC544864 (LOC544864),
           mRNA
          Length = 3627

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 ggtctgaggagccgcgtgct 202
           ||||||||||||||||||||
Sbjct: 622 ggtctgaggagccgcgtgct 603
to top
>ref|XM_571340.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNF03820) partial mRNA
          Length = 2379

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  tcaagcccaagcactcgtcc 318
            ||||||||||||||||||||
Sbjct: 1537 tcaagcccaagcactcgtcc 1556
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     cgtccgacgaggcgctgggc 333
               ||||||||||||||||||||
Sbjct: 2600865 cgtccgacgaggcgctgggc 2600846
to top
>emb|CR547127.14| Mouse DNA sequence from clone CH25-592M6 on chromosome X, complete
             sequence
          Length = 72790

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   gacgcccgccatggagagct 274
             ||||||||||||||||||||
Sbjct: 69599 gacgcccgccatggagagct 69580
to top
>emb|CR548624.2| Mouse DNA sequence from clone CH25-423E5 on chromosome X, complete
             sequence
          Length = 30460

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   gacgcccgccatggagagct 274
             ||||||||||||||||||||
Sbjct: 27304 gacgcccgccatggagagct 27285
to top
>dbj|AK172326.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830201G14 product:E3 ligase for inhibin
           receptor homolog [Homo sapiens], full insert sequence
          Length = 2282

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 ggtctgaggagccgcgtgct 202
           ||||||||||||||||||||
Sbjct: 86  ggtctgaggagccgcgtgct 105
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     aggtcgtcggcgtcgtcaag 363
               ||||||||||||||||||||
Sbjct: 1460273 aggtcgtcggcgtcgtcaag 1460292
to top
>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 221   tggtggagaggagggacggcaggagagc 248
             ||||||||||  ||||||||||||||||
Sbjct: 19126 tggtggagagaggggacggcaggagagc 19099
to top
>gb|AC149577.3| Medicago truncatula chromosome 2 BAC clone mth2-13b10, complete
             sequence
          Length = 126904

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tccccaccttccatgaaatc 51
             ||||||||||||||||||||
Sbjct: 72165 tccccaccttccatgaaatc 72184
to top
>gb|AC157213.2| Mus musculus BAC clone RP23-157N5 from chromosome 12, complete sequence
          Length = 211304

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    ggtctgaggagccgcgtgct 202
              ||||||||||||||||||||
Sbjct: 133485 ggtctgaggagccgcgtgct 133504
to top
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1150F11
          Length = 130355

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 474   gctgcacttcagttcatccatggt 497
             |||||||||||||||||| |||||
Sbjct: 32104 gctgcacttcagttcatcgatggt 32127
to top
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504E02
          Length = 137468

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 474    gctgcacttcagttcatccatggt 497
              |||||||||||||||||| |||||
Sbjct: 112244 gctgcacttcagttcatcgatggt 112267
to top
>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 221    tggtggagaggagggacggcaggagagc 248
              ||||||||||  ||||||||||||||||
Sbjct: 127807 tggtggagagaggggacggcaggagagc 127780
to top
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      agaataccgccacttccatg 87
               ||||||||||||||||||||
Sbjct: 1517330 agaataccgccacttccatg 1517349
to top
>gb|AF061245.1|AF061245 Sinorhizobium fredii glucosyl transferase ExoA (exoA) and ExoM (exoM)
            genes, complete cds; and glucosyl transferase ExoO (exoO)
            gene, partial cds
          Length = 2906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  ccaagcgccgcttccgcttc 387
            ||||||||||||||||||||
Sbjct: 1693 ccaagcgccgcttccgcttc 1712
to top
>dbj|AP004523.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03J05, TM0050,
           complete sequence
          Length = 86209

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 474 gctgcacttcagttcatccatggt 497
           |||||||||||||| |||||||||
Sbjct: 817 gctgcacttcagtttatccatggt 794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,353,536
Number of Sequences: 3902068
Number of extensions: 3353536
Number of successful extensions: 64459
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 63641
Number of HSP's gapped (non-prelim): 811
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top