>GCN1L_HUMAN (Q92616) GCN1-like protein 1 (HsGCN1)|
          Length = 2670

 Score = 56.6 bits (135), Expect(2) = 3e-12
 Identities = 31/89 (34%), Positives = 50/89 (56%)
 Frame = +2

Query: 41   KTGYCITLHSVADALSSKDLPIAMTFPISRGLADHNLDVCGRMINAGILIIDKHGKENVP 220
            + G  + L+ ++  L S  +     F +   L D + DV   M++A +  ++ HGKENV 
Sbjct: 1233 RCGLALALNKLSQYLDSSQVKPLFQFFVPDALNDRHPDVRKCMLDAALATLNTHGKENVN 1292

Query: 221  LLLPIFESYLNKRASNEETCDLVREGVVI 307
             LLP+FE +L K A N+ + D VR+ VV+
Sbjct: 1293 SLLPVFEEFL-KNAPNDASYDAVRQSVVV 1320



 Score = 33.5 bits (75), Expect(2) = 3e-12
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +1

Query: 334  RSVVEKLLDVLNTPSEAVQRPVSDCLSPLM 423
            + +V KL+  L+TPS+ VQ  V+ CL PL+
Sbjct: 1337 KPIVAKLIAALSTPSQQVQESVASCLPPLV 1366

>GCN1_YEAST (P33892) Translational activator GCN1|
          Length = 2672

 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
 Frame = +2

Query: 56   ITLHSVADALSSKDLPIAMTFPI---SRGLADHNLDVCGRMINAGILIIDKHGKENVPLL 226
            ITL  +A A S++D  +           GL D    V   M  AG+ +I  HG +N   L
Sbjct: 1189 ITLKIMAKAFSAEDDTVVNIIKFLVDDGGLVDREPIVRQEMKEAGVELITLHGSQNSKDL 1248

Query: 227  LPIFESYLNKRASNEETCDLVREGVVIYW 313
            +PIFE      A +  T   ++E V+I +
Sbjct: 1249 IPIFE-----EALSSSTDSALKENVIILY 1272



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = +1

Query: 337  SVVEKLLDVLNTPSEAVQRPVSDCLSPLM 423
            +++E+LL  L+TPS  +Q+ VS C++PL+
Sbjct: 1288 TIIERLLSTLDTPSADIQQAVSACIAPLV 1316



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 119  PISRGLADHNLDVCGRMINAGILIIDKHGKENVPLLLPIFE 241
            PI  GLAD++ ++    + AG LI+  +  + V LLLP  E
Sbjct: 1729 PILSGLADNDENIRDTALKAGKLIVKNYATKAVDLLLPELE 1769

>YAQ5_SCHPO (Q10105) Putative translational activator C18G6.05c (GCN1 homolog)|
          Length = 2670

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +1

Query: 340  VVEKLLDVLNTPSEAVQRPVSDCLSPLM 423
            V++ LL VL+TPSE+VQ  V+ CL PL+
Sbjct: 1324 VMDSLLSVLSTPSESVQLAVAVCLPPLV 1351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,287,302
Number of Sequences: 219361
Number of extensions: 1319050
Number of successful extensions: 2978
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2978
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)