>SOX13_MOUSE (Q04891) SOX-13 protein|
          Length = 985

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 188 ATSAADAVTTCCPPGDQATEQKAGEPEP 105
           A ++ DA T   PP D A+ + +G PEP
Sbjct: 34  APASQDAATAKAPPQDCASPESSGSPEP 61

>AAAS_MOUSE (P58742) Aladin (Adracalin)|
          Length = 546

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 112 GSPAFCSVAWSPGGQHVVTASAADVAILIHD 204
           G     S+AW+P G  +++AS  D  IL+ D
Sbjct: 243 GHTPVTSLAWAPNGGWLLSASPVDAVILVWD 273

>AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)|
          Length = 546

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 112 GSPAFCSVAWSPGGQHVVTASAADVAILIHD 204
           G     S+AW+P G  +++AS  D AI + D
Sbjct: 243 GHTPVTSLAWAPSGGRLLSASPVDAAIRVWD 273

>TTLL4_HUMAN (Q14679) Tubulin--tyrosine ligase-like protein 4|
          Length = 1199

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/54 (33%), Positives = 21/54 (38%)
 Frame = -1

Query: 203 SWIRMATSAADAVTTCCPPGDQATEQKAGEPEPALCASRSLTARPFMAMPRERC 42
           SW      A  A    C   D +  Q   +      A R LTAR F  MPR+ C
Sbjct: 303 SWYNRNNLAMRAEPLSCALDDSSDSQDPTKEIRFTEAVRKLTARGFEKMPRQGC 356

>A16L1_HUMAN (Q676U5) Autophagy-related protein 16-1 (APG16-like 1)|
          Length = 607

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 115 SPAFCSVAWSPGGQHVVTASAADVAIL 195
           S +  +VAWSP G HVV+      A+L
Sbjct: 577 SSSINAVAWSPSGSHVVSVDKGCKAVL 603

>ARGC_VIBVY (Q7MH70) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 334

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 124 FCSVAWSPGGQHVVTASAAD 183
           FC + W   GQH++  SA D
Sbjct: 288 FCDLGWKVQGQHIIVISAID 307

>K0323_HUMAN (O15037) Protein KIAA0323|
          Length = 678

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 19  TKKSSDAKHLSRGIAMKGRAVKLREAHKAGSG 114
           T+ SS A+H SRG A  G+  + RE  K   G
Sbjct: 597 TQGSSKAQHPSRGFAEHGKQQQGREEEKGSGG 628

>ATG16_XENTR (Q5I0B9) Autophagy-related protein 16 (APG16-like 1)|
          Length = 537

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 115 SPAFCSVAWSPGGQHVVTASAADVAILIHD 204
           S +  +VAWSP G HVV+       +L  D
Sbjct: 507 SSSINAVAWSPSGTHVVSVDKGSRGVLWSD 536

>ARGC_VIBVU (P59313) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 334

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 124 FCSVAWSPGGQHVVTASAAD 183
           FC + W   GQH++  SA D
Sbjct: 288 FCDLGWRVQGQHIIVISAID 307

>ARGC_VIBPA (Q87L55) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 334

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 124 FCSVAWSPGGQHVVTASAAD 183
           FC + W   G+H++  SA D
Sbjct: 288 FCDIGWKVQGEHIIVISAID 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.129    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,085,883
Number of Sequences: 219361
Number of extensions: 433983
Number of successful extensions: 1563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)