ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25c12 |
|---|---|
| Clone Library Name | barley_pub |
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 66.2 bits (160), Expect = 2e-11 Identities = 33/63 (52%), Positives = 38/63 (60%) Frame = -2 Query: 221 TCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSRGLGPGP 42 TCSLSVSR YLALDG+Y P+ AAFPNN TR P TG SPS S+ GP Sbjct: 30 TCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGFSPSMTSCSKEHRQGP 89 Query: 41 SLR 33 + + Sbjct: 90 ATK 92
>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 60.8 bits (146), Expect = 8e-10 Identities = 38/95 (40%), Positives = 44/95 (46%) Frame = -2 Query: 344 TSKSRSAYGRGASPAPIRFPPGNXXXXXXXXXXXXXXFPRGTCSLSVSRLYLALDGVYRP 165 T K + A + P FP N F TCSLSVSR YLALDG+Y P Sbjct: 6 THKEQRAQNTMSDQMP--FPFNNFTYFFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHP 63 Query: 164 IWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSR 60 + AAFPNN T + P TG SPS S+ Sbjct: 64 LRAAFPNNSTLRRHFTKNRTPRHTGFSPSMTSCSK 98
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 35.4 bits (80), Expect = 0.035 Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGER 205 GA G A P P PRG V G G SG G P PR N GER Sbjct: 1121 GAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGER 1171 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRP 178 G DR + GAPG P P PV P G + G G SG G P Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSGAPGPAGARGAP 1084 Query: 179 RPRLNTGER 205 P+ G++ Sbjct: 1085 GPQGPRGDK 1093 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 GAPG A P P PRG E+G G G R P Sbjct: 1073 GAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGFP 1111 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGE 202 GAPG + A P P GA + G G K+G G P R GE Sbjct: 404 GAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGE 450 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRPRPRLNT 196 G A D Q KG PG P P P+ G G G P G P P+ Sbjct: 917 GVAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIK 976 Query: 197 GE 202 GE Sbjct: 977 GE 978 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +2 Query: 62 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPR 187 ++G PG P P GA+ SG G +SG GRP R Sbjct: 198 YQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPGER 241 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/57 (31%), Positives = 22/57 (38%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGK 235 +G PG P P G+ ESG G SG R +P + P N GK Sbjct: 535 RGMPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGK 591
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 34.7 bits (78), Expect = 0.059 Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGER 205 GA G A P P PRG V G G SG G P PR N GER Sbjct: 1121 GAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGER 1171 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRP 178 G DR + GAPG P P PV P G + G G SG G P Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPSGAPGPAGARGAP 1084 Query: 179 RPRLNTGER 205 P+ G++ Sbjct: 1085 GPQGPRGDK 1093 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 SG + + GAPG A P P PRG E+G G G R P Sbjct: 1057 SGKSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGFP 1111 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRPRPRLNT 196 G A D Q KG PG P P P+ G G G P G P P+ Sbjct: 917 GIAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIK 976 Query: 197 GE 202 GE Sbjct: 977 GE 978 Score = 27.7 bits (60), Expect = 7.2 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 11/71 (15%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGR--VRAPSGPD----PVAPRGAVNESGCLGMQPKSG----- 169 GD+ + +R G PG P GP+ P P G SG G+Q G Sbjct: 674 GDSGAPGERGPPGTAGIPGARGGAGPPGPEGGKGPAGPPGPPGASGSPGLQGMPGERGGP 733 Query: 170 GRPRPRLNTGE 202 G P P+ GE Sbjct: 734 GSPGPKGEKGE 744 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/57 (31%), Positives = 22/57 (38%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGK 235 +G PG P P G+ ESG G SG R +P + P N GK Sbjct: 535 RGMPGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGK 591
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 34.3 bits (77), Expect = 0.077 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 127 RASWGDRVRAGRGSHPPRRPFPGDL 53 RA W R +AG +HPP PFPG L Sbjct: 380 RAKWRKREKAGAQTHPPGLPFPGPL 404
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 34.3 bits (77), Expect = 0.077 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 127 RASWGDRVRAGRGSHPPRRPFPGDL 53 RA W R +AG +HPP PFPG L Sbjct: 382 RAKWRKREKAGAQTHPPGLPFPGPL 406
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 33.5 bits (75), Expect = 0.13 Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 18/114 (15%) Frame = +2 Query: 32 SSATDRAQVPWKGA---PGRVRAPSGPDPVA-------------PRGAVN-ESGCLGMQP 160 S+ R Q P G PG AP GP P P GA + G G +P Sbjct: 224 STGMARPQAPRPGGAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPGGAPRPQGGPGGARP 283 Query: 161 KSGGRPRPRL-NTGERPIANKYREGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 GG PRP+ G P N+ G M + + G G G RPG Sbjct: 284 TPGGMPRPQAPRPGGAPGGNRPNPGMMPQRPAAGPRPGGGGPGGRGPGGGGRPG 337 Score = 30.8 bits (68), Expect = 0.85 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Frame = +2 Query: 23 GDASSATDRAQVPWK-GAPGRVRA--PSGPDPVAPRGAVNESGCLGMQPKSGGR---PRP 184 G+ A R P K GAP +A P+ P P AP+ A E +P + PRP Sbjct: 53 GNGGKAAPRKAAPAKPGAPSPAQAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPGPRP 112 Query: 185 RLNTGERPIANKYREGKMKRTLKRESKSA*NCREGSGWGPAMRPGRMRNG 334 RP + T + +A SG P RPG + G Sbjct: 113 GPKPAPRPAPAAPAPAAPEFTAPPSAPAA-PAAAASGPRPGARPGAPKPG 161
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRPRPRLNTGERPIANKY 223 GAPG AP P PRG G G P G+P P GER + KY Sbjct: 145 GAPGHPGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQPGP---PGERGVCPKY 195
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.1 bits (74), Expect = 0.17 Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 17/64 (26%) Frame = +2 Query: 65 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLN 193 +G PG AP P P PRG V SG G SG G P PR N Sbjct: 953 RGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGN 1012 Query: 194 TGER 205 GER Sbjct: 1013 RGER 1016 Score = 31.2 bits (69), Expect = 0.65 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGE 202 GAPG + A P P G + G G K+G G P PR GE Sbjct: 249 GAPGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGE 295 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 5/45 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPR 187 GAPG P P P G G +G K G GRP PR Sbjct: 42 GAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGRPGPR 86 Score = 29.6 bits (65), Expect = 1.9 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 G + DR + GAPG P P PV P G + G G SG P P + G Sbjct: 870 GAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGA-PGPAGSRG 927 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 +G PG P GP P +G SG G K G R Sbjct: 569 QGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPR 605 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 17/62 (27%) Frame = +2 Query: 68 GAPGRVRAPS---GPDPVAPRGAVNESGCLGMQ--------------PKSGGRPRPRLNT 196 G PG P GP P PRG E G G+ P S G+P P + Sbjct: 342 GLPGEKGPPGDRGGPGPAGPRGVAGEPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPGSQ 401 Query: 197 GE 202 GE Sbjct: 402 GE 403 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRP 184 G A R V G PG+ A P P+ P G G G + G G+P P Sbjct: 975 GSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGP 1030 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = +2 Query: 23 GDASSATDRAQVPW---KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G A + DR + GAPG + P P PRG E+G G G R P Sbjct: 900 GPAGKSGDRGETGPAGPSGAPGPAGSRGPPGPQGPRGDKGETGERGAMGIKGHRGFP 956 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 G PG AP P+ PRGA E G G+ +G R Sbjct: 132 GVPGEDGAPG---PMGPRGAPGERGRPGLPGAAGAR 164
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 33.1 bits (74), Expect = 0.17 Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 17/64 (26%) Frame = +2 Query: 65 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLN 193 +G PG AP P P PRG V SG G SG G P PR N Sbjct: 1109 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN 1168 Query: 194 TGER 205 GER Sbjct: 1169 RGER 1172 Score = 30.8 bits (68), Expect = 0.85 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGERPI 211 GAPG + A P P GA G G K+G G P PR GE I Sbjct: 405 GAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRP 178 G DR + GAPG P P PV P G + G G +G G P Sbjct: 1026 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAP 1085 Query: 179 RPRLNTGER 205 P+ G++ Sbjct: 1086 GPQGPRGDK 1094 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Frame = +2 Query: 44 DRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRPRPRLNTGE--RPI 211 D Q KG+PG P P P+ G G G P G P P+ GE +P Sbjct: 925 DAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPG 984 Query: 212 AN 217 AN Sbjct: 985 AN 986 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPR 187 G PG+ PSGP P GA+ SG G +SG GRP R Sbjct: 204 GEPGQA-GPSGPP--GPPGAIGPSGPAGKDGESGRPGRPGER 242 Score = 27.7 bits (60), Expect = 7.2 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 18/79 (22%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSG----PDPVAPRGAVNESGCLGMQ---------- 157 +G+ + R G PG + P+G P P PRGA E G G+ Sbjct: 482 AGERGAPGFRGPAGPNGIPGE-KGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPG 540 Query: 158 ----PKSGGRPRPRLNTGE 202 P S G+P P + GE Sbjct: 541 SPGGPGSDGKPGPPGSQGE 559 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 GAPG + P P PRG E+G G G R P Sbjct: 1074 GAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFP 1112 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/57 (31%), Positives = 22/57 (38%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGK 235 +G PG P P G+ ESG G SG R +P + P N GK Sbjct: 536 RGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGK 592 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 KG G P P+ PRGA E G G+ +G R Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGAR 320
>ELN_BOVIN (P04985) Elastin precursor (Tropoelastin)| Length = 747 Score = 33.1 bits (74), Expect = 0.17 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -1 Query: 234 FPSRYLFAIGLSPVFSLGRGLPPDLGCIPKQPDSLTAPRGATGSGPDGAL--TLPGAP 67 F +R IG P F LG G P +G P + A G+G GAL +PGAP Sbjct: 408 FGARGAVGIGGIPTFGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGGVGALGGVVPGAP 465
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 32.3 bits (72), Expect = 0.29 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Frame = +2 Query: 68 GAPGRVRAPSG---PDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGERPIANKY 223 G PG AP P P P+GA G G +SG G P P GE+ I KY Sbjct: 225 GPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKY 281 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + D + G PG AP P P P G E+G G + G Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG 202
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 32.3 bits (72), Expect = 0.29 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 KG G AP P PV P+G+ G G++ + G G+P PR GE Sbjct: 1186 KGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGE 1236 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G+ R Q G PG V AP P P P+G E G G+ K G Sbjct: 624 GETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKG---EPGLTGLPEKPG 669
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 151 G + DR + GAPG AP P PV P G + G G Sbjct: 590 GSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETG 632 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 +G S R + G PG V P P P +GA G G + G P P+ G Sbjct: 463 AGKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAG----APGTPGPQGIAG 518 Query: 200 ERPI 211 +R + Sbjct: 519 QRGV 522 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRL 190 KGAPG P P+G + G +G+ + G R P L Sbjct: 496 KGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 537 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 G+PG + PSG P PRG +G G +G G P PR TG+ Sbjct: 686 GSPGE-QGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGD 735
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 32.0 bits (71), Expect = 0.38 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGR 175 P E G+ SA G+PG P P P P GA ++E+G G+ +GG Sbjct: 488 PGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDETGIAGLHLPNGGV 547 Query: 176 PRPRLNTGERP 208 L G +P Sbjct: 548 EGAVLGKGGKP 558
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/64 (34%), Positives = 24/64 (37%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 G A DR + GAPG P P P P G + G G Q G P G Sbjct: 1022 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMG----PSGPAGA 1077 Query: 203 RPIA 214 R IA Sbjct: 1078 RGIA 1081 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGS-GPDGALTLPGA 70 P+ P +T P+GA G+ GP GA PGA Sbjct: 846 PQGPTGVTGPKGARGAQGPPGATGFPGA 873 Score = 29.6 bits (65), Expect = 1.9 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRPRPRLNTGERPIANKY 223 GAPG AP P P P G +G LG + ++G G P+ TG P + Sbjct: 395 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETG--PAGPQG 452 Query: 224 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 G KR ++ E G GP PG Sbjct: 453 APGPAGEEGKRGARG-----EPGGAGPIGPPG 479
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/64 (34%), Positives = 24/64 (37%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 G A DR + GAPG P P P P G + G G Q G P G Sbjct: 982 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMG----PSGPAGA 1037 Query: 203 RPIA 214 R IA Sbjct: 1038 RGIA 1041 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGS-GPDGALTLPGA 70 P+ P +T P+GA G+ GP GA PGA Sbjct: 806 PQGPTGVTGPKGARGAQGPPGATGFPGA 833 Score = 30.4 bits (67), Expect = 1.1 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRPRPRLNTGERPIANKY 223 GAPG AP P P P G +G LG + ++G G P+ TG P + Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETG--PAGPQG 412 Query: 224 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 G KR ++ E G GP PG Sbjct: 413 APGPAGEEGKRGARG-----EPGGAGPIGPPG 439 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +2 Query: 65 KGAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSGGRPRPRL 190 KG PG PSG D P P+G + G +G+ + G R P L Sbjct: 888 KGEPGD-DGPSGSDGPPGPQGLAGQRGIVGLPGQRGERGFPGL 929
>POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 31.6 bits (70), Expect = 0.50 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = +2 Query: 59 PWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRP-RPRLNTG 199 P G G + PS PDP +++G P G P P L+TG Sbjct: 2366 PSSGLGGSIAGPSSPDPTTADDTCSDAGSFSSMPPLEGEPGDPDLSTG 2413
>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)| Length = 348 Score = 31.2 bits (69), Expect = 0.65 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = +1 Query: 97 RPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSE-QVPRGKDE----KDFEKRV 261 R P +PTR V + AA+IG+ K + TDSE ++ +GK + KD EK Sbjct: 95 RRQPLKPTRT---VEVDSKAAEIGKKGEDKTTQKDTTDSESELKQGKKDSKKGKDIEKGK 151 Query: 262 KECLKLPGGKRMGAGDAPR 318 +E L + G DA + Sbjct: 152 EEKLDAKKDSKKGKKDAEK 170
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 31.2 bits (69), Expect = 0.65 Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 6/92 (6%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTG----ERPIANKYRE 229 G PG + P P PRGA G G +G G P P N G P+ + + Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGK 896 Query: 230 GKMKRTLKRESKSA*NCREGSGWGPAMRPGRM 325 G T GPA RPG + Sbjct: 897 GPRGET-----------------GPAGRPGEV 911 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +2 Query: 68 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYRE 229 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 396 GAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEE 455 Query: 230 GK 235 GK Sbjct: 456 GK 457 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = +2 Query: 62 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPR 187 ++G PG P G P+ PRG G G ++G GRP R Sbjct: 190 FQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRPGER 233 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 G PG V P P P +G+ G G S G P P+ G+R + Sbjct: 906 GRPGEVGPPGPPGPAGEKGSPGADGPAG----SPGTPGPQGIAGQRGV 949 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 G+PG + PSG P PRG +G G +G G P PR TG+ Sbjct: 1113 GSPGE-QGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGD 1162 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGER 205 GAPG AP P P G SG G + SG G P + +TG + Sbjct: 390 GAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAK 437
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 31.2 bits (69), Expect = 0.65 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 GAPG + PSG P PRG +G G +G G P PR TGE Sbjct: 1113 GAPGE-QGPSGASGPAGPRGPPGSAGAAGKDGLNGLPGPIGPPGPRGRTGE 1162 Score = 30.8 bits (68), Expect = 0.85 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G A DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGER 205 GAPG AP P P G SG G + SG G P + +TG + Sbjct: 390 GAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNSGEPGAPGNKGDTGAK 437 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTG 199 GAPG P P RG+ G G +G G P P N G Sbjct: 837 GAPGPAGZVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIG 882 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +2 Query: 62 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPR 187 ++G PG P P+ PRG G G ++G GRP R Sbjct: 190 FQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGQR 233
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 31.2 bits (69), Expect = 0.65 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKY 223 G PG +P P P P G + G G P + G P + GER I KY Sbjct: 234 GQPGADGSPGQPGPKGPNGPDGQPGADG-NPGAPGPAGPPGSPGERGICPKY 284
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 31.2 bits (69), Expect = 0.65 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G A DR + GAPG P P P P G + G G Q G Sbjct: 981 GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMG 1029 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGS-GPDGALTLPGA 70 P+ P +T P+GA G+ GP GA PGA Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA 832
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 31.2 bits (69), Expect = 0.65 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRV----RAPSGPD--PVAPRGAVNESGCLGMQPKSGGRPRP 184 G++S+ + QVP V RAPS PD P PR S L +PK + +P Sbjct: 2327 GESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKP 2386 Query: 185 R 187 R Sbjct: 2387 R 2387
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 31.2 bits (69), Expect = 0.65 Identities = 31/91 (34%), Positives = 38/91 (41%) Frame = +2 Query: 83 VRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGKMKRTLKRES 262 V PS PDP R G + P+ G P R NT +RP A R+GK T + Sbjct: 255 VAPPSRPDPEGQRPDKKRPG---ISPRPIGGPNQRANTSQRPGA-PIRQGK---TRPGQP 307 Query: 263 KSA*NCREGSGWGPAMRPGRMRNGSCWSAAR 355 +SA N E G +P R SA R Sbjct: 308 RSAGNTLELVG-----KPIRRDRSDAGSAGR 333
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 P++ +GD+ A+ G PG P P P PRG G G Q +G R Sbjct: 281 PTDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGER 337
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 30.8 bits (68), Expect = 0.85 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGR 175 P E +G+ +A G+PG P P P P GA +E+G G+ +GG Sbjct: 492 PGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGV 551 Query: 176 PRPRLNTGERP 208 L G +P Sbjct: 552 EGAVLGKGGKP 562 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -1 Query: 150 PKQPDSLTAPRGATGSGPDGALTLPGAP-FQG 58 P P L P G T G GA +PG P FQG Sbjct: 157 PPGPPGLPGPSGITIPGKPGAQGVPGPPGFQG 188
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 0.85 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + G PG AP P PV P G + G G +G Sbjct: 1028 GSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +2 Query: 68 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYRE 229 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 407 GAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEE 466 Query: 230 GK 235 GK Sbjct: 467 GK 468 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 G+PG + PSG P PRG +G G +G G P PR TG+ Sbjct: 1124 GSPGE-QGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGD 1173 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/64 (26%), Positives = 25/64 (39%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 +G R + G PG V P P P +G+ G G + G P P+ G Sbjct: 901 AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAG----APGTPGPQGIAG 956 Query: 200 ERPI 211 +R + Sbjct: 957 QRGV 960
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTG 199 KG PG V P P P G E G G+ G G P R +TG Sbjct: 619 KGEPGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGLRGDTG 665 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAP---RGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGK 235 G PG P P P P RG V E G G + +SG + P P EGK Sbjct: 320 GLPGPRGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGK 378 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 SG + QV G PG P PV P GA G G Q G + P Sbjct: 955 SGALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEP 1009 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/60 (30%), Positives = 23/60 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 G+ A + + KG PG P P P G +G +P S G P P GE Sbjct: 344 GEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGKRGSNG----EPGSAGPPGPAGLRGE 399
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 207 GLSPVFSLGRGLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 67 G+SP G PP L P +P + P GATG P G + PG P Sbjct: 151 GISPPGLFGERGPPGL---PGRPGPV-GPMGATGRAPKGDIPDPGPP 193
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 151 G A A DR + G+PG P GP P G E G G Sbjct: 620 GPAGPAGDRGEPGPSGSPGLQGLPGGPGPAGENGKPGEPGPKG 662 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQ-----PKSGGRPRPRLNTGER 205 GA G P P P P+G E G G P + G P P N G+R Sbjct: 839 GAAGPQGGPGAPGPPGPQGVKGERGSPGGPGAAGFPGARGPPGPPGNNGDR 889 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 17/62 (27%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----------------GRPRPRLNT 196 GAPG+ P+ P+GA+ G G + G G P PR N Sbjct: 911 GAPGKAGERGFQGPLGPQGAIGSPGASGARGPPGPAGPPGKDGRGGYPGPIGPPGPRGNR 970 Query: 197 GE 202 GE Sbjct: 971 GE 972 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 11/57 (19%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGM-----------QPKSGGRPRPRLNTGE 202 KG G +P P P P G + G G+ P S G+P P N GE Sbjct: 502 KGPAGERGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPGIPGSPGSDGKPGPPGNQGE 558 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 +G PG + P P GA +G G+Q G G P P+ + GE Sbjct: 694 RGGPGPAGSEGAKGPPGPPGAPGGTGLPGLQGMPGERGASGSPGPKGDKGE 744
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 127 RASWGDRVRAGRGSHPPRRPFPGDL 53 RA W R +AG +HP PFPG L Sbjct: 267 RAKWRKREKAGVQAHPTGLPFPGPL 291
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = +2 Query: 29 ASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERP 208 A + +RA+ P +G P+GP P PR + G P+SG PRP G RP Sbjct: 269 AQAREERAERPDRGPRPAGARPAGPRPGGPRQGDSRPGDGRPAPRSGA-PRP---GGARP 324 Query: 209 IA 214 A Sbjct: 325 AA 326
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PG PSGP P P G +G G GG P Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQ-----PKSGGRPRPRLNTGERPIANKY 223 GAPG GP P P+G +G G P + G+P GE+ I KY Sbjct: 236 GAPGT----GGPGPAGPKGPPGAAGAPGADGNPGGPGTAGKPG---GEGEKGICPKY 285
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQ--PKSGGRPRPRLNTGER-PIANKYREG 232 +G PG P PRGA E+G G Q P G+P P G R P + R G Sbjct: 951 QGTPGHSGESGPPGAPGPRGARGEAGGRGSQGPPGKDGQPGPSGRVGPRGPSGDDGRSG 1009 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 GAPG+ P V RG G GM+ GG P P + GER Sbjct: 781 GAPGQQGERGMPGMVGLRGETGPMGGQGMK-GDGGPPGPSGDRGER 825
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.9 bits (63), Expect = 3.2 Identities = 23/62 (37%), Positives = 25/62 (40%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 +G A D KG PGR P P PV PRG E G G + G P G Sbjct: 1600 TGRAGPPGDSGPPGEKGDPGR---PGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPG-KAG 1655 Query: 200 ER 205 ER Sbjct: 1656 ER 1657 Score = 24.6 bits (52), Expect(2) = 1.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 282 GREADGGRRCAPAVCGTALAGP 347 G + + GR PAV G A+AGP Sbjct: 1531 GEKGEPGRPGDPAVVGPAVAGP 1552 Score = 23.9 bits (50), Expect(2) = 1.4 Identities = 16/46 (34%), Positives = 17/46 (36%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 GAPG P P PRG G G G P P GE+ Sbjct: 1453 GAPGLPGQPGSPGEQGPRGPPGAIGPKG----DRGFPGPLGEAGEK 1494
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRL 190 KG PG P P P G + G +GM + G R P L Sbjct: 965 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1006 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/54 (29%), Positives = 21/54 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 GD + V +GAPG P P+GA E G +G G + P Sbjct: 504 GDPGTLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDP 557
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLN 193 GD D+ GAPG + + P+G E+G G++ G R +P N Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGETGLPGLKGDLGERGKPGWN 245
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG G P P P RG R G G GR P Sbjct: 700 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGP 744
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRP 178 +GAPG AP P P P+G + G G QP + G P Sbjct: 48 QGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPGAPGAP 87
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG G P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGP 741
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG G P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGP 741
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Frame = +2 Query: 65 KGAPGRVRAPSG-------PDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 KG PG VR P G P P+ PRG + G G+ P + G P+ TG++ Sbjct: 150 KGRPG-VRGPRGMPGSPCSPGPIGPRGEKGDIGLTGL-PGARGPMGPKGLTGQK 201
>C1QC_MOUSE (Q02105) Complement C1q subcomponent subunit C precursor| Length = 246 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRPRPRLNTGERPIANK 220 KG PG P+ P P+G E G G + K+G G P PR GE + + Sbjct: 58 KGEPG---IPAVPGTQGPKGQKGEPGMPGHRGKNGPRGTSGLPGDPGPRGPPGEPGVEGR 114 Query: 221 YRE 229 Y++ Sbjct: 115 YKQ 117
>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog| Length = 217 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -1 Query: 165 DLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 22 D G +P+ P+GA SG G ++ + G W AED +P Sbjct: 7 DGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAP 54 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/53 (32%), Positives = 22/53 (41%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRP 178 SG S + A PW+ AP P+ R A + CL P +G RP Sbjct: 30 SGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACL--LPGAGARP 80
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 GDA D Q KG PGR G PRGA E G G + GGR Sbjct: 493 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGAPGEKGEPGPRGPEGGR 539 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPR 187 G+A S +R KG PGR P + +G+ G G G G P PR Sbjct: 358 GEAGSPGERGDQGGKGDPGRPGRRGPPGEIGAKGSKGYQGNNGAPGSPGVKGAKGGPGPR 417 Query: 188 LNTGE 202 GE Sbjct: 418 GPKGE 422
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR-----PRPR 187 G A +A + + +G PG P P RG ESG G G R P P Sbjct: 559 GPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGPPGPD 618 Query: 188 LNTGE 202 N GE Sbjct: 619 GNKGE 623 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPS--GP----DPVAPRGAVNESGCLGMQPKSGGRPR 181 +G+A SA +G+PG P GP P PRGA +G G SG Sbjct: 384 NGEAGSAGPSGPPGLRGSPGSRGLPGADGPAGVMGPPGPRGATGPAGVRGPNGDSGRPGE 443 Query: 182 PRL 190 P L Sbjct: 444 PGL 446
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/46 (39%), Positives = 18/46 (39%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TP 180 GPGP P RG P P P RG R G G GR P Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPPPFRGARGGRSGGGPPNGRGGP 742
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G DR + G PG AP P PV P G + G G +G Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1072 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +2 Query: 68 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYRE 229 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 403 GAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEE 462 Query: 230 GK 235 GK Sbjct: 463 GK 464 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 G+PG + PSG P PRG +G G +G G P PR TG+ Sbjct: 1120 GSPGE-QGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGD 1169 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 G PG V P P P +G+ G G + G P P+ G+R + Sbjct: 913 GRPGEVGPPGPPGPAGEKGSPGADGPAG----APGTPGPQGIAGQRGV 956 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGER 205 GAPG AP P P G SG G + SG G P + +TG + Sbjct: 397 GAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAK 444
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGER 205 G+PG AP P P P G G G Q G G P + GE+ Sbjct: 632 GSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGSAGEK 679
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 G PG V P P P +G+ G G S G P P+ G+R + Sbjct: 906 GRPGEVGPPGPPGPAGEKGSPGADGPAG----SPGTPGPQGIAGQRGV 949 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 6/92 (6%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTG----ERPIANKYRE 229 G PG + P P RGA G G +G G P P N G P+ + + Sbjct: 837 GPPGPIGNVGAPGPKGSRGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGK 896 Query: 230 GKMKRTLKRESKSA*NCREGSGWGPAMRPGRM 325 G T GPA RPG + Sbjct: 897 GPRGET-----------------GPAGRPGEV 911 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGER 205 GAPG AP P P G SG G + SG G P + +TG + Sbjct: 390 GAPGIAGAPGFPGARGPSGPQGPSGAPGPKGTSGEPGAPGNKGDTGAK 437 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 68 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 G+PG + PSG P PRG +G G +G G P PR TG+ Sbjct: 1113 GSPGE-QGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGD 1162
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 8/69 (11%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRP 178 GDA +R KG PGR P P +G+ G G Q G G P Sbjct: 358 GDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRKGETGPP 417 Query: 179 RPRLNTGER 205 P+ G R Sbjct: 418 GPKGEPGRR 426 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 KG PG P P PRG E G G + G P PR TG Sbjct: 435 KGGPGAKGERGDPGPEGPRGLPGEVGNKGARGDQ-GLPGPRGPTG 478
>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament| protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1090 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3 Query: 24 ETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTSRVVWECSPNRAVDPVQ 185 ET+ + + KSPG+ + G PA SP EA+S SP A P + Sbjct: 512 ETKSRVKEEAKSPGEAKSPGEAKSPAEAKSPGEAKSPGEAK---SPGEAKSPAE 562
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 29.6 bits (65), Expect = 1.9 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRPRPRLNTGERPIANKY 223 GAPG AP P P P G +G LG + ++G G P+ G P + Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG--PAGVQG 295 Query: 224 REGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 G KR ++ E G GPA PG Sbjct: 296 APGPAGEEGKRGARG-----EPGGAGPAGPPG 322
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 183 GRGLPPDLGCIPK--QPDSLTAPRGATGSGPDGALTLPGAPFQG 58 GR LPP LG PK Q +L A G+ D L G PF G Sbjct: 637 GRLLPPGLGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGG 680
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRPRPRLNTGE 202 G PG R P GP P G V E G G+ P G P P+ + G+ Sbjct: 612 GLPGN-RGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQ 657
>MARCO_MOUSE (Q60754) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) Length = 518 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGER 205 KGA GR P P P G+ E+G G+ G G P PR G + Sbjct: 179 KGAAGRDGTPGVQGPQGPPGSKGEAGLQGLTGAPGKQGATGAPGPRGEKGSK 230
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +2 Query: 26 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 ++ SA+ ++PW P R PSG + + + + +G L P G Sbjct: 864 ESGSASGDGEIPWSSTPTVDRLPSGGESLEGSASASGTGDLSGLPSGG 911
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein| Length = 417 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -3 Query: 175 STARFG----LHSQTTRLVDRASWGDRVRAGRGSHPPRRPF 65 S RFG + S +T + SW DRVR P RPF Sbjct: 85 SPMRFGKRPRISSNSTSRSCKTSWADRVREAAAQRRPSRPF 125
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PG+V +P P P A +G+ G G+ P S G P P Sbjct: 1167 GFPGKVGSPGPPGPQAEKGSEGIRGPSGL-PGSPGPPGP 1204
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 62 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGG 172 W+ P R P D V PRG + GC G GG Sbjct: 1624 WRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGG 1660
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = -2 Query: 128 PRLVGRQGPGRTGLSPSQAPLSRGLG 51 P V R+ GRT SP APLSRG G Sbjct: 180 PPEVNRREEGRTSESPEVAPLSRGPG 205
>CNTP4_HUMAN (Q9C0A0) Contactin-associated protein-like 4 precursor (Cell| recognition molecule Caspr4) Length = 1308 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 92 PSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNT 196 PS PDPV G V ES C+ QP + R R ++ Sbjct: 1185 PSHPDPVTVTGHVTESSCMA-QPGTDATSRERTHS 1218
>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1| Length = 965 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/46 (32%), Positives = 16/46 (34%) Frame = +2 Query: 71 APGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERP 208 AP P G P P A + GG PRPR G P Sbjct: 682 APSAGGGPDGEQPTGPPSATSSGADGPANSPDGGSPRPRRRLGPPP 727
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 26 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESG 142 ++ SA+ +VPW P R PSG + +P G+ + SG Sbjct: 868 ESGSASGDGEVPWSHTPTVGRLPSGGE--SPEGSASASG 904
>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)| Length = 419 Score = 28.9 bits (63), Expect = 3.2 Identities = 22/73 (30%), Positives = 28/73 (38%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 +GD D+ V G PG P +G E G G++ G R P LN Sbjct: 105 NGDIGEKGDQGPVGLPGVPGIPGKPGEKGDPGLKGDKGERGFSGLKGDPGERGEPGLNGT 164 Query: 200 ERPIANKYREGKM 238 + I REG M Sbjct: 165 KGSIG---REGPM 174
>CL46_BOVIN (Q8MHZ9) Collectin-46 precursor (CL-46) (46 kDa collectin)| Length = 371 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGERPIAN 217 +GAPG + AP P GA+ G G + G G P R GE +A+ Sbjct: 162 RGAPGELGAPGSAGVAGPAGAIGPQGPSGARGPPGLKGDRGDPGERGAKGESGLAD 217
>CXA1_HUMAN (P17302) Gap junction alpha-1 protein (Connexin-43) (Cx43) (Gap| junction 43 kDa heart protein) Length = 381 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 267 LFDSLFKVLFIFPSRYLFAIGLSPVFSLGRG-LPPDLGCIPKQPDSLT 127 LF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 159 LFKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 206
>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor| Length = 3137 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-GRPRPRLNTGER 205 G GR P P P P G G +G + G G P P+ GER Sbjct: 2272 GPLGRKGEPGNPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGER 2318
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/36 (38%), Positives = 15/36 (41%) Frame = +2 Query: 92 PSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 P GP P G G GM P GG P P + G Sbjct: 593 PGGPPPHMMGGPGMHGGPAGMPPHMGGGPNPHMMGG 628
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREG 232 KG PG V A P P G E G G+ G + P L GE I N R+G Sbjct: 621 KGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLR-GE--IGNPGRDG 673
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRP 178 KG PG V AP PV P G + G G++ G GRP Sbjct: 1338 KGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPGSVGQQGRP 1380 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 168 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 G G+ P P V P+G ESG +G + SG Sbjct: 913 GFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSG 946
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/52 (36%), Positives = 20/52 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKY 223 G PG P P P P G + G G P G P GER I KY Sbjct: 237 GQPGNDGTPGQPGPKGPPGPDGKPGADG-NPGQPGPVGPPGTPGERGICPKY 287 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Frame = -1 Query: 177 GLPPDLGCI-----PKQPDSLTAPRGATGSGPDGALTLPGAP 67 GLP D G P QP S AP GP+GA PGAP Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGAPGKPGAP 201
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/51 (31%), Positives = 20/51 (39%) Frame = +2 Query: 32 SSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 + A R W+G + PSGP +A RG V G S G P Sbjct: 868 AGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 12/68 (17%) Frame = +2 Query: 68 GAPGRVRAPSGPDP------------VAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 G PG AP P P PRG V E G G + ++G + P + P Sbjct: 319 GLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPP 378 Query: 212 ANKYREGK 235 EGK Sbjct: 379 GPSGEEGK 386 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPR 187 G + +A + + +G PG P P RG ESG G G G P P Sbjct: 565 GPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPD 624 Query: 188 LNTGE 202 N GE Sbjct: 625 GNKGE 629
>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 1146 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 5/57 (8%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQ-----PKSGGRP 178 G A A Q +G PG + P P P G E G G Q P + GRP Sbjct: 323 GPAGQAGRDGQPGERGEPGLMGIPGARGPPGPSGDTGEPGLTGPQGPPGLPGNPGRP 379
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 G+PG AP P P P G G G Q +G R Sbjct: 138 GSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPR 173
>SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) (Lck-associated signal transducer) Length = 388 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 8/53 (15%) Frame = +2 Query: 74 PGRVRAPSG--PDPVAPRGAVNESGCLG------MQPKSGGRPRPRLNTGERP 208 PG + P G P P A N S +G M P+ G PRP + G +P Sbjct: 118 PGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQP 170
>SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) Length = 388 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 8/53 (15%) Frame = +2 Query: 74 PGRVRAPSG--PDPVAPRGAVNESGCLG------MQPKSGGRPRPRLNTGERP 208 PG + P G P P A N S +G M P+ G PRP + G +P Sbjct: 118 PGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQP 170
>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) (Protein 59) (Fragment) Length = 553 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = -1 Query: 198 PVFSLGRGLPPDLGCIPK---QPDSLTAPRGATGSGPDGALTLPGAPF 64 P S RG P G +P+ + +SL P G +G G PG PF Sbjct: 350 PAASSSRGGEPGPGPLPRSLSRSNSLPHPAGGGKAGGPGVAAEPGTPF 397
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 G G P P P+G + +G G GGR P +N P+ Sbjct: 241 GPLGAAGPPGFPGAPGPKGEIGGAGSNGPSGPQGGRGEPGINGAVGPV 288
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 28.5 bits (62), Expect = 4.2 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 9/94 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDP---VAPRGAVNESGCLGM-QPKSGGRP---RPRLNTGERP--IANK 220 GAP R P+ P P P A ++ G PK+ G P + R ++P A Sbjct: 269 GAPPAARPPASPSPQRQAGPPQATRQTSVSGQAPPKASGAPPSGQQRQGPPQKPPGPAGP 328 Query: 221 YREGKMKRTLKRESKSA*NCREGSGWGPAMRPGR 322 R+ + R SG GPA RP + Sbjct: 329 TRQASQAGPMPRTGPPTTQQPRPSGPGPAGRPAK 362
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 28.5 bits (62), Expect = 4.2 Identities = 22/84 (26%), Positives = 32/84 (38%) Frame = +2 Query: 71 APGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGKMKRTL 250 +PG P P P+A R + + +GC PRP ++ P A R Sbjct: 200 SPGGTVQPKSPAPLAARCSASRAGCPTAAGSLLPAPRPPASSASSPQAAAPAAPSATRLP 259 Query: 251 KRESKSA*NCREGSGWGPAMRPGR 322 +R + SA P+ RP R Sbjct: 260 RRTTPSAPR--------PSSRPAR 275
>SRP1_SCHPO (Q10193) Pre-mRNA-splicing factor srp1| Length = 275 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +3 Query: 33 PQRRTGPKSPGKGRLGG*EPR-PARTLSPHEARSTSRVVWECSPNRAVDPVQG*IQARDR 209 P + G + GR+ G R +R+ SPHEARS S E S R++ P + R R Sbjct: 92 PGSKRGGRRERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSP-----RYRSR 146 Query: 210 *RTSTARER 236 R+ R R Sbjct: 147 SRSPDGRSR 155
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PGR P P P P G E G G +G R P Sbjct: 2822 GLPGRSGTPGLPGPPGPVGPPGERGFTGKDGPTGPRGPP 2860 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/44 (43%), Positives = 19/44 (43%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 G PG P GP PRG E G G S G P PR TG Sbjct: 2751 GPPGPPGPPGGPGAKGPRG---ERGLTG----SSGPPGPRGETG 2787
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKY 223 G PG P P P P G + G G P + G+ GE+ I KY Sbjct: 201 GQPGHDGQPGAPGPKGPNGNPGQPGADG-NPGAPGQSGTPGGVGEKGICPKY 251
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRP 178 KG PG + AP PV P G + G G++ G GRP Sbjct: 1338 KGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRP 1380 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +1 Query: 43 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 168 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 G G+ P P V P+GA E+G +G + G P P GE+ Sbjct: 913 GFQGKTGPPGPPGVVGPQGAAGETGPMGER----GHPGPPGPPGEQ 954
>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)| Length = 1500 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/62 (27%), Positives = 22/62 (35%) Frame = +1 Query: 40 DGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQ 219 D P PS E +E E P+ P P P+ + Q P + Y E E Sbjct: 798 DQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPNYETEKPLEP 857 Query: 220 VP 225 P Sbjct: 858 AP 859
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 28.5 bits (62), Expect = 4.2 Identities = 30/103 (29%), Positives = 37/103 (35%) Frame = +1 Query: 19 VWRRVLSDGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYR 198 VW R+ + P SP + G P +P R G+R G GR P A Sbjct: 104 VWSRLGARRPSCSPEQHGGKVARLQPPPTKAQPARGGRR----GRRRGRGRGGPGAA--- 156 Query: 199 RETDSEQVPRGKDEKDFEKRVKECLKLPGGKRMGAGDAPRPYA 327 D PR +R + PGG R GAG P A Sbjct: 157 ---DGLSDPR--------RRAPRTNRNPGGPRPGAGWTDGPGA 188
>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor| Length = 3063 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PGR P P P P G + G G G R P Sbjct: 2818 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDSAMGPRGPP 2856 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/72 (29%), Positives = 27/72 (37%) Frame = +2 Query: 44 DRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKY 223 D A P +G PGR +P P P G +P GRP P GE+ Sbjct: 2847 DSAMGP-RGPPGRPGSPGSPGVTGPSGKPG-------KPGDHGRPGPSGLKGEKGDRGDI 2898 Query: 224 REGKMKRTLKRE 259 M R + R+ Sbjct: 2899 ASQNMMRAVARQ 2910
>PS1C2_PANTR (Q7YR45) Psoriasis susceptibility 1 candidate gene 2 protein| homolog precursor (SPR1 protein) Length = 136 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +2 Query: 59 PWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 PW GAP P P P P + E+G +P P+P Sbjct: 53 PWPGAPPLFEDPPPPHPSPPWRDLPETGVWPPEPPRTDPPQP 94
>SFTPD_BOVIN (P35246) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) Length = 369 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 G A +R GAPGR AP + P+G G G++ G P R GE Sbjct: 154 GPAGLKGERGAPGEPGAPGRAGAPGPAGAIGPQGPSGARGPPGLK-GDRGTPGERGAKGE 212 Query: 203 RPIAN----KYREGKMKRTLKR 256 +A + R G ++ L+R Sbjct: 213 SGLAEVNALRQRVGILEGQLQR 234
>CSKI2_HUMAN (Q8WXE0) Caskin-2| Length = 1202 Score = 28.5 bits (62), Expect = 4.2 Identities = 28/98 (28%), Positives = 33/98 (33%) Frame = -1 Query: 360 PSRAADQQEPFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLG 181 P+R + + F +R R GP P P P R G SP Sbjct: 849 PARGTPRSQSFALRARR-KGPPPPP------------------PKRLSSVSGPSPE---- 885 Query: 180 RGLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 67 PP L P + T PR T S P G PG P Sbjct: 886 ---PPPLDGSPGPKEGATGPRRRTLSEPAGPSEPPGPP 920
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -1 Query: 168 PDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 22 PDL + PDS A T SGP A PGAP G + ED P Sbjct: 19 PDLA--GRAPDSEAARAAPTPSGPPAAAAPPGAP--GDELYAALEDYHP 63
>CONG_BOVIN (P23805) Conglutinin precursor| Length = 371 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 KGAPG AP G SG +G Q SG R P L G+R Sbjct: 162 KGAPGETGAP------GRAGVTGPSGAIGPQGPSGARGPPGLK-GDR 201
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PG P P PRG GC G Q SG + P Sbjct: 112 GFPGADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPP 150
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 101 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 21 G +GL PS A + PGP+L T Q Sbjct: 996 GHSGLPPSPAKIGNSTNPGPALATNPQ 1022
>SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4| Length = 385 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 GD +A A ++G PG +P P+ AP + G M P+ G PRP L Sbjct: 109 GDTMAAGSMAAGFFQGPPGSQPSPHNPN--APM--MGPHGQPFMSPRFPGGPRPTLRMPS 164 Query: 203 RPIA 214 +P A Sbjct: 165 QPPA 168
>DIA_DROME (P48608) Protein diaphanous| Length = 1091 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 1/91 (1%) Frame = +2 Query: 74 PGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER-PIANKYREGKMKRTL 250 PGR P P P G GM GG P P + G P+ + K K + Sbjct: 548 PGRAGGPPPPPPPPGMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDV 607 Query: 251 KRESKSA*NCREGSGWGPAMRPGRMRNGSCW 343 K K A W A+ P +M + + W Sbjct: 608 KNPMKRA-------NW-KAIVPAKMSDKAFW 630
>TACC2_MOUSE (Q9JJG0) Transforming acidic coiled-coil-containing protein 2| Length = 1035 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = -1 Query: 150 PKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGT 1 P++P ++ P GP + ++ G+PF+ + + S D S GT Sbjct: 65 PEEPGCISEPPVVVPDGPRSSESVEGSPFRPSHSSSAVFDEDKPIASSGT 114
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +2 Query: 86 RAPSGPD-PVAP----RGAVNESGCLGMQPKSGGRPRPRL 190 R+P GP P AP R A+ +GC + P RPRL Sbjct: 11 RSPQGPGGPAAPAATGRAALPSAGCCPLPPGRNSSSRPRL 50
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGR-----VRAPSG-PDPVAPRGAVNESGCLGMQPKSG 169 G+ A D GAPG R P G P P PRG E+G G Q + G Sbjct: 404 GEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGPRGPRGDPGEAGPQGDQGREG 458
>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth| regulatory gene 11 protein) Length = 301 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Frame = +1 Query: 79 EGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYRRETDSEQVPRGKDEKDFEKR 258 E P+ P P P G++ L +K+ R+ET PR + + E R Sbjct: 151 EPGEPLAPSPQEPQAVGRQSLL------------AKSPLRQETQEAPGPREEAKGQVEAR 198 Query: 259 VKEC--LKLPGGKRMGAGDAPRPYAE 330 + ++ PGG+ GD P P E Sbjct: 199 RESLDPVQEPGGQAEADGDVPGPRGE 224
>GLGB_YEAST (P32775) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) Length = 704 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 Query: 297 HPLPSRQFQALFDSLFKVLFIFP 229 HPLP+ F DS KV+FI P Sbjct: 115 HPLPNGDFAIPHDSKIKVMFILP 137
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)| (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPR 181 KG G P P P PRG E G G Q +G R R Sbjct: 1452 KGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQVYAGRRRR 1490
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/61 (34%), Positives = 24/61 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 GDA ++ D GA G A P P G ESG G +G R P GE Sbjct: 649 GDAGNSGDYGNPGRDGARGPAGAAGAPGPAGGPGDRGESGPAGPSGVAGPRGAP----GE 704 Query: 203 R 205 R Sbjct: 705 R 705 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 +GAPG P RGA ESG G SG R Sbjct: 564 RGAPGDFGPPGSAGTRGERGAPGESGGAGPHGPSGSR 600
>VP40_EHV1V (P84454) Capsid protein P40 (Virion structural gene 35 protein)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; Gene 35.5 protein; C-terminal peptide] Length = 646 Score = 28.1 bits (61), Expect = 5.5 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -1 Query: 279 QFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRGLPPDLGCIPKQP-DSLTAPRGATGS 103 Q QA L+K + P +Y + P ++ + P L IP QP ++ AP+ G Sbjct: 513 QPQAAPAGLYKPIPAVPPQYSQYQYIQPQHAVSAIVAPQLPGIPSQPTQAVLAPQVPAGE 572 Query: 102 GPDGALTLPG--APFQGTWARSVAE 34 P A + AP Q AR+ + Sbjct: 573 APGSAKVVAASTAPQQAEQARAAPQ 597
>VP40_EHV1B (P28936) Capsid protein P40 (Virion structural gene 35 protein)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; Gene 35.5 protein; C-terminal peptide] Length = 646 Score = 28.1 bits (61), Expect = 5.5 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Frame = -1 Query: 279 QFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRGLPPDLGCIPKQP-DSLTAPRGATGS 103 Q QA L+K + P +Y + P ++ + P L IP QP ++ AP+ G Sbjct: 513 QPQAAPAGLYKPIPAVPPQYSQYQYIQPQHAVSAIVAPQLPGIPSQPTQAVLAPQVPAGE 572 Query: 102 GPDGALTLPG--APFQGTWARSVAE 34 P A + AP Q AR+ + Sbjct: 573 APGSAKVVAASTAPQQAEQARAAPQ 597
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 GAPG P P PV G + CLG + R Sbjct: 643 GAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSAR 678
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 101 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 21 G +GL PS A + PGP+L T Q Sbjct: 1044 GHSGLPPSPAKIGNSTNPGPALATNPQ 1070
>HSV2_EMENI (Q5B464) SVP1-like protein 2| Length = 317 Score = 28.1 bits (61), Expect = 5.5 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Frame = -1 Query: 237 IFPSRYLFAIGLSPVFSLGRGLP-----PDLGCIPKQPDSLTAPRGATGSGPDGALTLPG 73 +F Y FA S F LG P P LG + +P P+G G D + + G Sbjct: 231 VFSDVYSFA---SAHFELGEEEPGPTYAPPLGTVLGRP-----PKGVIGWSNDNTILVVG 282 Query: 72 APFQGTWARSVAED 31 + G W + V D Sbjct: 283 SGSDGRWEKFVLRD 296
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +3 Query: 3 CRPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARST 134 CR + S PQ+RTG SP +G PRP + E RS+ Sbjct: 274 CRCSSSTHRLPQQRTGTFSPQRGSPTP-SPRPGSPVPGSERRSS 316
>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)| Length = 317 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PGR P P P P G + G G G R P Sbjct: 17 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPP 55
>LPIN1_HUMAN (Q14693) Lipin-1| Length = 890 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 Query: 6 RPNCSLETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTS 137 + + L ++ RTG K+P L G P+ A++ SPH+ + +S Sbjct: 251 KSDSELVSKSTERTGQKNPEMLWLWGELPQAAKSSSPHKMKESS 294
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 28.1 bits (61), Expect = 5.5 Identities = 37/116 (31%), Positives = 42/116 (36%), Gaps = 17/116 (14%) Frame = +2 Query: 29 ASSATDRAQVPWKGA---PGRVRAPS-----GPDPVAPRGAVNE--SGCLG-MQPKSGGR 175 A T R VP G PG P GP P G + SG G +P+SG Sbjct: 88 AGGETPRPAVPKPGPGLKPGPRPVPKPGPRPGPRPEGGAGKAGQQPSGAQGPARPESGKT 147 Query: 176 PRPRLNTGERPIANKY---REGKMKRTLKRESKSA*NCREGSGW---GPAMRPGRM 325 PRP G RP N + G R R S G+G GP PG M Sbjct: 148 PRPVPKPGPRPGNNPFSSTASGMGTRPTPRPPASG-----GTGAPRPGPRPHPGMM 198
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PGR P P P P G + G G G R P Sbjct: 2823 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPP 2861
>YL57_CAEEL (P34437) Putative zinc finger protein F44E2.7| Length = 471 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = +1 Query: 181 SKAKYRRETDSEQVPRGKDEKDFEKR----VKECLKLPGGKRMGAGDAPRPYAERLLLVR 348 ++A+Y R+ +++ + K KD EKR +++CL+L K A R AE+ + R Sbjct: 148 AEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKTAAAAQI-RETAEKAAVAR 206 Query: 349 R 351 R Sbjct: 207 R 207
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGE 202 +G PG P P RG ESG G G G P P N GE Sbjct: 579 RGLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGE 629 Score = 27.3 bits (59), Expect = 9.4 Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 12/96 (12%) Frame = +2 Query: 68 GAPGRVRAPSGPDP------------VAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 G PG AP P P RG V E G G + +SG + P + P Sbjct: 319 GLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESGNKGEPGSVGAQGPP 378 Query: 212 ANKYREGKMKRTLKRESKSA*NCREGSGWGPAMRPG 319 EG KR E+ SA GPA PG Sbjct: 379 GPSGEEG--KRGSPGEAGSA---------GPAGPPG 403
>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| (Flamingo homolog 2) (hFmi2) Length = 3014 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 3/107 (2%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVA---PRGAVNESGCLGMQPKSGGRPRPRL 190 S D+ A+ W A G V + D VA P G ++S G+PR ++ Sbjct: 2825 SSDSEDDGVGAEEKWDPARGAVHSTPKGDAVANHVPAGWPDQSLAESDSEDPSGKPRLKV 2884 Query: 191 NTGERPIANKYREGKMKRTLKRESKSA*NCREGSGWGPAMRPGRMRN 331 T ++ +G + + +S R S P R G ++N Sbjct: 2885 ETKVSVELHREEQGSHRGEYPPDQESGGAARLASSQPPEQRKGILKN 2931
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 +GAPG+ A P P +G+ + G +G + ++G Sbjct: 210 QGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETG 244
>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2| Length = 916 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/61 (27%), Positives = 22/61 (36%) Frame = +2 Query: 26 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 + +A DR + K A A S P PVA A + + PRP G Sbjct: 175 EEQAAKDRVEAERKAAEEAAAAASAPAPVAAAPAPSSAPAARAPSSPSSAPRPARPAGAS 234 Query: 206 P 208 P Sbjct: 235 P 235
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/49 (36%), Positives = 22/49 (44%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 KG PG +P P PV P GA G G ++G R P + PI Sbjct: 409 KGDPGIAGSPGLPGPVGPAGA---KGVPGHNGEAGPRGVPGIPGTRGPI 454
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAV------NESGCLGMQPKSGGRPRPRL 190 G PG P P P+ P GA+ E G +G Q G + P L Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAV------NESGCLGMQPKSGGRPRPRL 190 G PG P P P+ P GA+ E G +G Q G + P L Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
>NRX2B_RAT (Q63376) Neurexin-2-beta precursor (Neurexin II-beta)| Length = 662 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 495 GAPGVLLAPSAPAPNLPAGKMN 516
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -1 Query: 207 GLSPVFSLGRGLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTW 52 G++P +LG P + P S T+ G++G G GA GA GT+ Sbjct: 343 GIAPPLALG-AYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTY 393
>EFNB3_MOUSE (O35393) Ephrin-B3 precursor| Length = 340 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Frame = -1 Query: 177 GLPPDLGCIPKQPDS---LTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 22 G P G +P++P S + RGA S G T+PG P +R P Sbjct: 168 GQSPRGGAVPRKPVSEMPMERDRGAAHSAEPGRDTIPGDPSSNATSRGAEGPLPP 222
>US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to the N-terminus of| tre) (RN-tre) Length = 828 Score = 27.7 bits (60), Expect = 7.2 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = +1 Query: 52 PSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKY-RRETDSEQVPR 228 PSPL G E +P R P + R G TP +A+ RR++ E+ + Sbjct: 395 PSPLASGRRESGAPHRRHEHSPHPQS-RTG-----------TPERAQPPRRKSVEEESKK 442 Query: 229 GKDEKDFEKRVKECLKLPGGKRMGAGDAPRPY 324 KDE DF++ KLP G + D+ R Y Sbjct: 443 LKDEADFQR------KLPSGPQ----DSSRQY 464
>TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein| Length = 1723 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 46 PGPSPLERGAWEGESPVRPGPCRPT 120 P P P G+W G P PG RP+ Sbjct: 830 PPPQPEASGSWGGPPPPPPGNVRPS 854
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Frame = +2 Query: 29 ASSATDRAQVPWKGAPGRVRAPSGPDPV-------APRGAVNESGCLGMQPKSGGRPRPR 187 A S+ RA P G PG +R P P +PRG+ G P+ G PRP Sbjct: 149 AGSSLGRAPSPRPG-PGPLRQQGPPTPFDFLGRAGSPRGSPLAEGPQAFFPERGPSPRPP 207 Query: 188 LNTGERP 208 + P Sbjct: 208 ATAYDAP 214
>CXA12_HUMAN (Q5T442) Gap junction alpha-12 protein (Connexin-47) (Cx47)| (Connexin-46.6) (Cx46.6) Length = 439 Score = 27.7 bits (60), Expect = 7.2 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 7/78 (8%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPR-------GAVNESGCLGMQPKSGGRPR 181 G A+ DR P G P R P A R G V E G G + G +PR Sbjct: 361 GAAAGDRDRDSSPCVGLPAASRGPPRAGAPASRTGSATSAGTVGEQGRPGTHERPGAKPR 420 Query: 182 PRLNTGERPIANKYREGK 235 G + R+GK Sbjct: 421 ----AGSEKGSASSRDGK 434
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 5/51 (9%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGER 205 G PGR P P P G + G G+ G GR P+ GER Sbjct: 788 GLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGER 838 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/61 (32%), Positives = 24/61 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 GDA D + GA G V P P P G+ G G + G P PR GE Sbjct: 683 GDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGSRGLPGMEGPR----GAPGPRGLQGE 738 Query: 203 R 205 + Sbjct: 739 Q 739
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAV------NESGCLGMQPKSGGRPRPRL 190 G PG P P P+ P GA+ E G +G Q G + P L Sbjct: 387 GPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGVVGPQGPPGPKGEPGL 433
>CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor| Length = 3176 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G PGR P GP G G G + GG +P Sbjct: 2180 GVPGRDGVPGGPGETGKNGGFGRRGPPGAKGNKGGPGQP 2218
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/54 (27%), Positives = 18/54 (33%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 G D V G PG P P P RG G G + + G + P Sbjct: 1280 GSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEP 1333
>TRA2_PSEFL (Q51761) Putative transposase for insertion sequence IS1162| Length = 558 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +2 Query: 92 PSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRL 190 P+ P+P+AP A G + G+P+P L Sbjct: 525 PTHPEPIAPTAAGRHGPSTGRTMDAAGQPQPEL 557
>SYT_PYRFU (Q8U176) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 625 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +1 Query: 199 RETDSEQVPRGKDEKDFEKRVKECLKLPGGKRMGAGDAPRPYAERLLLVRR 351 +ET + V R +D K +E R++E +K K G PRP LLL +R Sbjct: 572 KETGTITVRRREDGKQYETRIEELIKEIKQKTEGFPYKPRPLP--LLLSQR 620
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Frame = +2 Query: 29 ASSATDRAQVPWKGAPGRVRAPSGPDPV---APRGAVNESGCLGMQPKSG--GRPRPRLN 193 A + +A++ +G PG + P PV GA ESG G Q G G P P Sbjct: 516 AQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGK 575 Query: 194 TGER 205 G+R Sbjct: 576 PGKR 579
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 5/52 (9%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRPRPRLNTGER 205 +G PG P PRG V + G G+ + G G P P+ G R Sbjct: 420 QGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVR 471 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 175 GAPG P P PV G + CLG + R Sbjct: 644 GAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASAR 679
>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2| Length = 902 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/61 (27%), Positives = 22/61 (36%) Frame = +2 Query: 26 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGER 205 + +A DR + K A A S P PVA A + + PRP G Sbjct: 161 EEQAAKDRVEAERKAAEEAAAAASAPAPVAAAPAPSSAPAARAPSSPSSAPRPARPAGAS 220 Query: 206 P 208 P Sbjct: 221 P 221
>RL15_STAES (Q8CRH9) 50S ribosomal protein L15| Length = 146 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = +2 Query: 65 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 K A G RVR G G + G G + +SGG+ RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPL 57
>RCOR2_HUMAN (Q8IZ40) REST corepressor 2| Length = 523 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Frame = -1 Query: 198 PVFSLGRGLPPDLGCIPKQPD------SLTAPRGATGSGPDGALTLPGAPFQ 61 P GR L P L P QP +L APR + GP TL GAP + Sbjct: 468 PPLQQGRFLQPRLA--PNQPPPPLIRPALAAPRHSARPGPQPPPTLIGAPLE 517
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -1 Query: 156 CIPKQPDSLTAPRGATGS-GPDGALTLPGAPFQG 58 CI K P L P G G GP G PGAP QG Sbjct: 133 CI-KCPQGLPGPAGVPGQPGPKGPNGNPGAPAQG 165
>PS1C2_MOUSE (Q80ZC9) Psoriasis susceptibility 1 candidate gene 2 protein| homolog precursor (SPR1 protein) Length = 134 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +2 Query: 59 PWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRL 190 PW GAP P P P + +SG +P S P+P L Sbjct: 51 PWPGAPPLFDEPPPPGSNRPWRDLPDSGAWPPKPPSTDPPKPPL 94
>NRX2A_RAT (Q63374) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1715 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 1548 GAPGVLLAPSAPAPNLPAGKMN 1569
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Frame = +2 Query: 29 ASSATDRAQVPWKGAPGRVRAPSGPDPV---APRGAVNESGCLGMQPKSG--GRPRPRLN 193 A + +A++ +G PG + P PV GA ESG G Q G G P P Sbjct: 514 AQAILQQARIALRGPPGPMGLTGRPGPVGGPGSTGAKGESGDPGPQGPRGVQGPPGPTGK 573 Query: 194 TGER 205 G+R Sbjct: 574 PGKR 577
>RIR1_HHV23 (P09853) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1144 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 16 VVWRRVLSDGPGPSPLERGAWEGESPVRPG 105 VV RR SDGP P + G+SP PG Sbjct: 242 VVVRRRWSDGPAPVAFPKPRRPGDSPGNPG 271
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 KG PG V AP P P G E G G+ G Sbjct: 619 KGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKG 653 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 G+ A + + KG PG V P P P G +G +G G P R N G Sbjct: 344 GEPGPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIG-PAGPPGPPGLRGNPGS 402 Query: 203 R 205 R Sbjct: 403 R 403
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 27.7 bits (60), Expect = 7.2 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRP 184 PS GD R + KG GR + A G E+G + ++GG PR Sbjct: 426 PSPGGRGDGPRRRPRKRRGRKGRMGRQLETTATSASATGGPAEEAGASAPEGQAGGGPRG 485 Query: 185 RLNTGERPIANKYREGKMKR 244 R G R A + R G +R Sbjct: 486 RAR-GPRQQARR-RHGPQRR 503
>PTN13_HUMAN (Q12923) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1) (PTP-BAS) (Protein-tyrosine phosphatase PTPL1) (Fas-associated protein-tyrosine phosphatase 1) (FAP-1) Length = 2485 Score = 23.9 bits (50), Expect(2) = 7.9 Identities = 11/41 (26%), Positives = 19/41 (46%) Frame = -1 Query: 147 KQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDAS 25 K P + ++GSG D +T P TW+ ++ + S Sbjct: 1644 KSPSRRDSYSDSSGSGEDDLVTAPANISNSTWSSALHQTLS 1684 Score = 21.9 bits (45), Expect(2) = 7.9 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -3 Query: 304 RPPSASLPAISSTL*LSFQSP 242 RPP LP I + L QSP Sbjct: 1587 RPPPGVLPEIDTALLTPLQSP 1607
>RS6_RHILO (Q984T8) 30S ribosomal protein S6| Length = 166 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -3 Query: 121 SWGDRVRAGRGSHPPRR--PFPGDLGPVR 41 S+GDR R RG PPR GD GP R Sbjct: 128 SFGDRDRGDRGDRPPRSFGDAGGDRGPRR 156
>COL14_CAEEL (P18834) Cuticle collagen 14| Length = 345 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLN 193 GAPGR P P P P G + G G G +P N Sbjct: 274 GAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQN 315
>Y2127_STRCO (P40182) Hypothetical protein SCO2127| Length = 191 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -1 Query: 174 LPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 31 LPP P + D++ R ATG GA PGA WA + AED Sbjct: 5 LPPSEAPRPDEADAVDETR-ATGE-TRGAAQEPGASDADAWATACAED 50
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 27.3 bits (59), Expect = 9.4 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 5/73 (6%) Frame = +2 Query: 5 PSEL*SGDASSATDRAQVPWKG-----APGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 169 P+E + + A A P +G AP P+ D AP A E G P G Sbjct: 39 PAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEG 98 Query: 170 GRPRPRLNTGERP 208 G P P G P Sbjct: 99 GAPAPAPAEGGAP 111
>VGLB_SHV1 (Q04464) Glycoprotein B precursor| Length = 920 Score = 27.3 bits (59), Expect = 9.4 Identities = 21/70 (30%), Positives = 27/70 (38%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 S DA +++ PG P GP+P P +P +PRP G Sbjct: 48 SDDADESSESIITGGAELPGEDAGPPGPEPGLPD-----------RPTKPRKPRP----G 92 Query: 200 ERPIANKYRE 229 R ANK RE Sbjct: 93 RRQRANKTRE 102
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 14/44 (31%) Frame = +1 Query: 40 DGP--GPSP-LERGAW--------EGES---PVRPGPCRPTRRG 129 DGP GP+P L RG W G S RP PCR RRG Sbjct: 335 DGPADGPAPGLGRGGWGVGREAGGSGRSVRTAARPEPCRGLRRG 378
>PHK_NOCFA (Q5Z066) Probable phosphoketolase (EC 4.1.2.-)| Length = 822 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 300 PHPLPSRQFQALFDSLFKVLFIF 232 PH LP R+F LF + ++F F Sbjct: 699 PHGLPDREFDTLFTTASPIIFAF 721
>NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1712 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 1545 GAPGVLFAPSAPAPNLPAGKMN 1566
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -2 Query: 149 PNNPTR*PR-LVGRQGPGRTGLSPSQAPLSRGLGPGPSL 36 P PT+ P GPG G P+ +P G GPGP+L Sbjct: 39 PPQPTQPPPGPAAASGPGAAG--PASSPPPAGPGPGPAL 75
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 24 ETRPQRRTGPKSPGKGRLGG*EPRPARTLSP-HEARSTSR 140 E R +R GP PG GR GG P P +P AR SR Sbjct: 825 EKRSRRPRGP-GPGPGRRGGGGPAPGAPAAPAAAARGPSR 863
>C1QC_RAT (P31722) Complement C1q subcomponent subunit C precursor| Length = 245 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = +2 Query: 65 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--------GRPRPRLNTGERPIANK 220 KG PG P+ P P+G E G G + K+G G P PR GE + Sbjct: 57 KGEPG---IPAIPGTQGPKGQKGEPGMPGHRGKNGPMGTSGSPGDPGPRGPPGEPGEEGR 113 Query: 221 YRE 229 Y++ Sbjct: 114 YKQ 116
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = +2 Query: 44 DRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 D+ ++ G PG+ P + P+GA +G G P G P P + GE+ + Sbjct: 448 DKGELGPFGPPGQKGEPGKRGELGPKGAQGPNGTAG-APGIPGHPGPMGHQGEQGV 502
>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor| Length = 1029 Score = 27.3 bits (59), Expect = 9.4 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Frame = +2 Query: 23 GDASSATDRAQVPWKG---APGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR--PRPR 187 G+A S +R KG PGR P P +G +G G GG+ P PR Sbjct: 368 GEAGSPGERGDQGAKGDSGRPGRRGPPGDPGDKGSKGYQGNNGAPGSPGVKGGKGGPGPR 427 Query: 188 LNTGE 202 GE Sbjct: 428 GPKGE 432
>1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2 alpha chain| precursor (MHC class I antigen Cw*2) Length = 366 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -3 Query: 184 WTGSTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 47 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYNRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP 129
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNES------GCLGMQPKSGGRPR 181 S S ++R P + P R AP P PV GA + G +P S G+P Sbjct: 301 SASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPP 360 Query: 182 P 184 P Sbjct: 361 P 361
>SPTB2_HUMAN (Q01082) Spectrin beta chain, brain 1 (Spectrin, non-erythroid beta| chain 1) (Beta-II spectrin) (Fodrin beta chain) Length = 2364 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 199 RETDSEQVPRGKDEKDFEKRVKECLKL 279 RET SE + R KD +D +K +++C +L Sbjct: 1261 RETASELLMRLKDNRDLQKFLQDCQEL 1287
>RL15_STAEQ (Q5HM18) 50S ribosomal protein L15| Length = 146 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = +2 Query: 65 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPI 211 K A G RVR G G + G G + +SGG+ RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPL 57
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%) Frame = +1 Query: 43 GPGPSPL--ERGAWEGESPVRPGPCRP 117 GPGP PL AW P RPG RP Sbjct: 16 GPGPRPLWGPGPAWSPGFPARPGRGRP 42
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Frame = -2 Query: 140 PTR*PRL--VGRQG--PGRTGLSPSQAPLSRGLGPGPS 39 PT P L GR G PG G SPS A + G PG S Sbjct: 22 PTNIPGLGAAGRSGMTPGAAGFSPSAASDASGFSPGYS 59
>ZBT38_HUMAN (Q8NAP3) Zinc finger and BTB domain-containing protein 38| Length = 1195 Score = 27.3 bits (59), Expect = 9.4 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 10/90 (11%) Frame = +1 Query: 85 ESPVRP----GPCRPTRRGQRVGLFGNAAQIGR*TPS-KAKYRRETDSEQVPRGKDEKDF 249 + P RP P + +R+ +++ + G +PS K KY E D +D+ Sbjct: 913 DKPWRPYYNYKPKKKSRQLKKMRKVNWRKEHGNRSPSHKCKYPAELDCAVGKAPQDKPFE 972 Query: 250 EKRVKECLKLP-----GGKRMGAGDAPRPY 324 E+ KE KL G K +GAG+ RP+ Sbjct: 973 EEETKEMPKLQCELCDGDKAVGAGNQGRPH 1002
>RL15E_AERPE (Q9YBZ8) 50S ribosomal protein L15e| Length = 225 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +2 Query: 62 WKGAPG--RVRAPSGPDPVAPRGAVNESGCL--GMQPKSGGRPRPRLNTGERP 208 W+ P RV P+ D G + G + ++ + GGR +PR N G RP Sbjct: 32 WRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNKGRRP 84
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRPRPRLNTGERPI 211 G PGR P P + PRG+ +G G G G P P G+R I Sbjct: 718 GDPGREGFPGPPGFMGPRGSKGTTGLPGPDGPPGPIGLPGPAGPPGDRGI 767
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Frame = +1 Query: 43 GPGPSPLE--RGAWEGESPVRPGPCRPTRRGQRVG 141 GPGP P RG G P P P R R G+ G Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPFRGARGGRSGG 731
>FCN2_MOUSE (O70497) Ficolin-2 precursor (Collagen/fibrinogen domain-containing| protein 2) (Ficolin-B) (Ficolin B) (Serum lectin p35) (EBP-37) (Hucolin) (Fragment) Length = 306 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/70 (28%), Positives = 27/70 (38%) Frame = +2 Query: 23 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGE 202 G+A + DR + G PG+ P P+G E G G + SG P TG Sbjct: 50 GEAGAKGDRGESGLPGIPGK------EGPTGPKGNQGEKGIRGEKGDSG--PSQSCATGP 101 Query: 203 RPIANKYREG 232 R +G Sbjct: 102 RTCKELLTQG 111
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/65 (21%), Positives = 29/65 (44%) Frame = +2 Query: 20 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTG 199 S D+ +T++ + +P + +PS +NE C+ P S +P + Sbjct: 803 SNDSKESTEKPEKEKSKSPEKELSPSNSSSSNKESKMNEKSCI-KSPSSTESLQPTVKQS 861 Query: 200 ERPIA 214 ++P+A Sbjct: 862 DQPVA 866
>NRX2B_HUMAN (P58401) Neurexin-2-beta precursor (Neurexin II-beta)| Length = 666 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 68 GAPGRVRAPSGPDPVAPRGAVN 133 GAPG + APS P P P G +N Sbjct: 499 GAPGVLFAPSAPAPNLPAGKMN 520
>HSPB9_MOUSE (Q9DAM3) Heat-shock protein beta-9 (HspB9)| Length = 168 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = +2 Query: 80 RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRPRPRLNTGERPIANKYREGKMKRTLKRE 259 +++ P DP A ++ SG L ++ ++ P P TG+ + K R G K +L+ E Sbjct: 107 QMQLPPTLDPAAMTCSLTPSGHLWLRGQNKCLPPPEAQTGQ---SQKPRRGGPKSSLQNE 163 Query: 260 S 262 S Sbjct: 164 S 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,243,478 Number of Sequences: 219361 Number of extensions: 1628187 Number of successful extensions: 8772 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 6559 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8606 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
