ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26b08 |
|---|---|
| Clone Library Name | barley_pub |
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 167 bits (424), Expect(2) = 9e-42 Identities = 82/116 (70%), Positives = 97/116 (83%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNV 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E L +GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKN 116 Score = 21.6 bits (44), Expect(2) = 9e-42 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = +1 Query: 421 HHASEFFLK 447 HH++EFFLK Sbjct: 117 HHSNEFFLK 125
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 167 bits (422), Expect = 2e-41 Identities = 79/116 (68%), Positives = 96/116 (82%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNV 253 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E L +GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 116
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 164 bits (416), Expect = 8e-41 Identities = 80/116 (68%), Positives = 98/116 (84%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNV 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E L RGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKN Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKN 114
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 115 bits (287), Expect = 7e-26 Identities = 60/116 (51%), Positives = 79/116 (68%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNV 253 +GG+ LTG G +KG VLM + LD DF A+++D V E+ +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NN GRG VG+EANLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKN 114
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 102 bits (254), Expect = 5e-22 Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLIS-STN 250 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LL + V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 251 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D G GK+ A LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKN 114
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 97.8 bits (242), Expect = 1e-20 Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 3/113 (2%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNVDHNN 265 LTGG +KG+VVLM+KN LDFNDF A+ +D + E L +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 GGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNT 424 G +GK+G A+LE W+ T + +T GE+ F VTFD+ D G PGA +++N+ Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNS 118
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 92.0 bits (227), Expect = 7e-19 Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 5/118 (4%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISST 247 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E L + V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NG +GK A LE +LL L + GE F VTFDW+ ++ GVPGA ++KN Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKN 115
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 83.6 bits (205), Expect = 2e-16 Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 5/118 (4%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISST 247 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++L + V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NG +GK A LE L T P E F VTFDW+ ++ GVPGA I+KN Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKN 116
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 80.1 bits (196), Expect = 3e-15 Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 6/123 (4%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLSR--GVTCQL 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +L GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIV 415 +S+T D +NGGRGK+G A+LE+ L + GE+ F V F+W + G+PGA++V Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 416 KNT 424 N+ Sbjct: 120 TNS 122
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 78.2 bits (191), Expect = 1e-14 Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 19/129 (14%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLS 214 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T L Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLG 394 R V+ QLIS+T D N G+GKVG + LE L +LP + GE+ F + F+W ++G Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMG 118 Query: 395 VPGAIIVKN 421 +PGA +KN Sbjct: 119 IPGAFYIKN 127
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 75.9 bits (185), Expect = 5e-14 Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 19/138 (13%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLSRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVT 367 +D +T L R V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 368 FDWSVDKLGVPGAIIVKN 421 F+W + +G+PGA +KN Sbjct: 115 FEWD-ESMGIPGAFYIKN 131
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 74.7 bits (182), Expect = 1e-13 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 14/125 (11%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLSRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T L R V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGA 406 QLIS+T D G+GK+G LE + ++LP + G++ F + F+W D +G+PGA Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQSAFKIHFEWD-DDMGIPGA 117 Query: 407 IIVKN 421 +KN Sbjct: 118 FYIKN 122
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 74.3 bits (181), Expect = 1e-13 Identities = 44/103 (42%), Positives = 63/103 (61%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNVDHNNGGRGKVGAE 292 G +KG+VVLM KN L+ N G+ V D + L R V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 293 ANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 LE + T+LP + GE+ F + F+W +G+PGA +KN Sbjct: 62 TFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKN 101
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 70.9 bits (172), Expect = 2e-12 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 15/124 (12%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLSRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T L R V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLIS+T D N G+GK+G LE + T+LP + G++ F + F+W D G+ GA Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFEWD-DGSGILGAF 115 Query: 410 IVKN 421 +KN Sbjct: 116 YIKN 119
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 68.9 bits (167), Expect = 6e-12 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 22/126 (17%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLSRGV 223 RG +KG+VVLM KN DFN+F +T ++DG T + SR + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 QLIS+T D G GKVG + LE+ L +LP + ++ F V F+W + G+P Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 404 AIIVKN 421 A +KN Sbjct: 122 AFYIKN 127
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 68.2 bits (165), Expect = 1e-11 Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 22/126 (17%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLSRGV 223 +G +KG+VVLM KN LDFN + V+D T L R + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 + QLIS+T D G GKVG E LE+ LPT LP + ++ F++ F+W G+PG Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFEWDA-SFGIPG 121 Query: 404 AIIVKN 421 A +KN Sbjct: 122 AFYIKN 127
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 65.9 bits (159), Expect = 5e-11 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 13/119 (10%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLSRGVTCQLISS 244 G +G +KG++V+M+KN LD N F + +D +T ++ ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALTFAATK-ISIQLISA 63 Query: 245 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 T D GG+GK+G NL + LP + GE + V F+W D G+PGA +KN Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKN 115
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 64.7 bits (156), Expect = 1e-10 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 20/124 (16%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLSRGVTC 229 RG LKG+V+LM+KN LD N +++D T L R V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 +LIS+T D + G+GKV EA LE L T++P + ++ F+V F+W +G PGA Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 410 IVKN 421 ++N Sbjct: 123 YIEN 126
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 34.7 bits (78), Expect = 0.12 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -3 Query: 318 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRLRSSVTPSMTVAPKSLKSSAFLRMR 139 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 138 TTEPLRWAPR-RPPVR 94 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = -3 Query: 273 RPPLLWSTLVELMSWQVTPRLRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 109 R P L++ L S PR RS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 108 RPPVRSLTMPPTP 70 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -3 Query: 309 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRLRSSVTPSMTVAPKSLKSSAFLRMRTTE 130 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 129 PLRWAPRRPP 100 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>DPH2_ASPFU (Q4WN99) Diphthamide biosynthesis protein 2| Length = 565 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 146 RKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNVDHNNGGRGKVGAE 292 ++ AL F D V +LLSRG+ C+ + V+ N G G V +E Sbjct: 58 KRIALQFPDDMLPDAPRVFQLLSRGLACRDVDKITVEKNGNGTGGVESE 106
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/83 (25%), Positives = 37/83 (44%) Frame = +2 Query: 146 RKNALDFNDFGATVMDGVTELLSRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTN 325 RKNA F DF T++ T +++ GV C ++ N+ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 326 LPFITTGENKFAVTFDWSVDKLG 394 L + T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -3 Query: 408 MAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSW 229 +APGTP + ++S++T + HCS + P P + WS L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 228 Q 226 Q Sbjct: 2576 Q 2576
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLSRGVTCQLISST 247 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 4.0 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -2 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>NU2M_TETNG (Q4JQI6) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 348 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -3 Query: 213 LRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 LR S ++T+AP +L + R +TT+P L +P TP I Sbjct: 293 LRLSYAMTLTIAPNNLTGTLPWRTQTTQPNMMTATMAASSILLLPMTPGI 342
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -2 Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>ICEN_PANAN (Q47879) Ice nucleation protein inaU| Length = 1034 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/80 (28%), Positives = 34/80 (42%) Frame = +2 Query: 2 HSSTTAS*LSKRATLPRDRAKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGA 181 HSST + AT D + + G G S LT G+R G +G+ Sbjct: 780 HSSTLTAGYGSTATAGADSSLIAGYG---SSLTSGIRSFLTAG--------------YGS 822 Query: 182 TVMDGVTELLSRGVTCQLIS 241 T++ G+ +L+ G LIS Sbjct: 823 TLISGLRSVLTAGYGSSLIS 842
>GLGC_ERWCT (Q6CZK2) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 425 Score = 28.5 bits (62), Expect = 8.9 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 5/99 (5%) Frame = +2 Query: 59 AKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLSRG-----V 223 A+ + + L GG RG LKG L K A+ F + ++ L+ G V Sbjct: 13 ARQLPLKSVALILAGG-RGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGV 71 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFIT 340 Q S T V H G + AE N LLP + T Sbjct: 72 ITQYQSHTLVQHIQRGWSFLNAEMNEFVDLLPAQQRYST 110
>PEPP2_HUMAN (Q9BQY4) Paired-like homeobox protein PEPP-2 (Testis homeobox gene| 1) Length = 288 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -3 Query: 417 LTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFA-SAPTFPRPPL 262 L MA G P + T +TA LF + + F SH S P FP P L Sbjct: 202 LPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPPSL 254
>ICEA_PANAN (P20469) Ice nucleation protein inaA| Length = 1322 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/80 (28%), Positives = 34/80 (42%) Frame = +2 Query: 2 HSSTTAS*LSKRATLPRDRAKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGA 181 HSST + AT D + + G G S LT G+R G +G+ Sbjct: 1068 HSSTLTAGYGSTATAGADSSLIAGYG---SSLTSGIRSFLTAG--------------YGS 1110 Query: 182 TVMDGVTELLSRGVTCQLIS 241 T++ G+ +L+ G LIS Sbjct: 1111 TLISGLRSVLTAGYGSSLIS 1130
>ICEN_ENTAG (P16239) Ice nucleation protein| Length = 1258 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/80 (28%), Positives = 34/80 (42%) Frame = +2 Query: 2 HSSTTAS*LSKRATLPRDRAKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGA 181 HSST + AT D + + G G S LT G+R G +G+ Sbjct: 1004 HSSTLTAGYGSTATAGADSSLIAGYG---SSLTSGIRSFLTAG--------------YGS 1046 Query: 182 TVMDGVTELLSRGVTCQLIS 241 T++ G+ +L+ G LIS Sbjct: 1047 TLISGLRSVLTAGYGSSLIS 1066
>SIPD_SALTY (Q56026) Cell invasion protein sipD (Salmonella invasion protein D)| Length = 343 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%) Frame = +2 Query: 230 QLISSTNVDHNNGGRG-KVGAEANLEQWLLPTNLP--FITTGENKFAVTFDWS------- 379 Q+ S+T + G G KV EA QWL NLP + + + + VT D + Sbjct: 207 QINSNTVLFPAQSGSGVKVATEAEARQWLSELNLPNSCLKSYGSGYVVTVDLTPLQKMVQ 266 Query: 380 -VDKLGVPG 403 +D LG PG Sbjct: 267 DIDGLGAPG 275
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/70 (27%), Positives = 29/70 (41%) Frame = -3 Query: 282 TFPRPPLLWSTLVELMSWQVTPRLRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRP 103 T P PP+ +T + P S P+ T +P + ++ T P P P Sbjct: 1452 TTPSPPISTTTTPPPTTTPSPPTTTPS-PPTTTPSPPTTTTTTPPPTTTPSPPMTTPITP 1510 Query: 102 PVRSLTMPPT 73 P + T+PPT Sbjct: 1511 PASTTTLPPT 1520
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>TLP_PRUAV (P50694) Thaumatin-like protein precursor| Length = 245 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 10/51 (19%) Frame = -3 Query: 411 MMAPGT------PSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 289 M+ PGT P LST S+ + L +PV NGRF R+ CS AS Sbjct: 35 MVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,986,126 Number of Sequences: 219361 Number of extensions: 874272 Number of successful extensions: 3583 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3456 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3553 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
