ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y3523_METJA (Q60282) Hypothetical protein MJECL23 36 0.045
2ATG18_CRYNE (Q5KGQ2) Autophagy-related protein 18 32 0.65
3YFGL_ECOLI (P77774) Lipoprotein yfgL precursor 32 1.1
4YP183_YEAST (Q08924) WD-repeat protein YPL183C 32 1.1
5AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7... 30 2.5
6Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124 30 3.2
7AMPA_PSESM (Q887M0) Probable cytosol aminopeptidase (EC 3.4.11.1... 30 4.2
8HXK1_DROME (Q9NFT9) Hexokinase type 1 (EC 2.7.1.1) 30 4.2
9BTNL2_MOUSE (O70355) Butyrophilin-like protein 2 precursor (Frag... 29 5.5
10SYIM_MOUSE (Q8BIJ6) Isoleucyl-tRNA synthetase, mitochondrial pre... 29 5.5
11RNC_MYCGE (P47607) Ribonuclease III (EC 3.1.26.3) (RNase III) 29 5.5
12UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 1... 29 5.5
13DHG_ECOLI (P15877) Quinoprotein glucose dehydrogenase (EC 1.1.5.... 29 5.5
14CYSQ_BUCAI (P57624) Protein cysQ homolog 29 7.2
15DHGA_ACICA (P05465) Quinoprotein glucose dehydrogenase-A precurs... 28 9.4
16FKBP3_MOUSE (Q62446) FK506-binding protein 3 (EC 5.2.1.8) (Pepti... 28 9.4
17S3TC2_MOUSE (Q80VA5) SH3 domain and tetratricopeptide repeats-co... 28 9.4
18KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier fami... 28 9.4
19DHG_GLUOX (P27175) Quinoprotein glucose dehydrogenase precursor ... 28 9.4
20SYY_CHLPN (Q9Z8I2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 9.4
21Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143 28 9.4

>Y3523_METJA (Q60282) Hypothetical protein MJECL23|
          Length = 827

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
 Frame = +3

Query: 33  KSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILR 212
           K  +  +++L   N + +LD+++G+  W + +E N  +D L +     +V L   G  + 
Sbjct: 99  KDIKDNIIILGCSNHLFALDIKTGNKIWEYKVEHN--VDSLFIKDN--IVMLEYRGGHVC 154

Query: 213 AWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAG-QWIYAISSIDGLISW 389
             ++  G  +WE+ +       SL          +DN+V++  G ++IYAI    G   W
Sbjct: 155 VLDVMTGDKIWESKVGERMWGFSL----------KDNIVILGDGDKYIYAIDVRTGGKLW 204



 Score = 35.4 bits (80), Expect = 0.077
 Identities = 30/130 (23%), Positives = 58/130 (44%)
 Frame = +3

Query: 60  LTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQM 239
           + EE    +LD+ +G   WR  I+     D  SLS    +V L      + A ++  G M
Sbjct: 566 ILEEGYAYALDINTGREIWRSKIKH----DVRSLSIKDDIVVLGCKKGYILALDINAGNM 621

Query: 240 VWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLISWGKEFTLDGLE 419
           +WE   ++  + ++L         ++++++L     ++YA+    G   W   F  +G E
Sbjct: 622 LWEFKAKSGKSIRNL--------SIKNDILLFGCDNYLYALDIDTGRELW--RFKAEG-E 670

Query: 420 IKQVVQSPEN 449
           +K +    +N
Sbjct: 671 VKSLSIKKDN 680



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/104 (23%), Positives = 48/104 (46%)
 Frame = +3

Query: 51  VVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPD 230
           VV+  ++  I +LD+ +G++ W    +    I  LS+   K  + L    + L A ++  
Sbjct: 602 VVLGCKKGYILALDINAGNMLWEFKAKSGKSIRNLSI---KNDILLFGCDNYLYALDIDT 658

Query: 231 GQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAI 362
           G+ +W    +     KSL        + +DN++L   G ++Y +
Sbjct: 659 GRELW--RFKAEGEVKSL-------SIKKDNVLLGCRGGYVYLL 693



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>ATG18_CRYNE (Q5KGQ2) Autophagy-related protein 18|
          Length = 423

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +3

Query: 141 PIDQLSL-SAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSA 272
           PI  L+L S G  + T S  G+++R +++PD + +W+    +SSA
Sbjct: 204 PIAALALNSTGTMLATASDKGTVVRVFSVPDAKKLWQFRRGSSSA 248



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>YFGL_ECOLI (P77774) Lipoprotein yfgL precursor|
          Length = 392

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
 Frame = +3

Query: 51  VVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWN--- 221
           V++ T    + +L+   G + W      N  +  LSL  G+   T + G +++   N   
Sbjct: 162 VLIHTSNGQLQALNEADGAVKWT----VNLDMPSLSLR-GESAPTTAFGAAVVGGDNGRV 216

Query: 222 ----LPDGQMVWETNIQTSSASKSL--LHVLSNSKVVQDNLVLVLAGQW-IYAISSIDGL 380
               +  GQM+W+  I  ++ S  +  L  +  + VV + +V  LA    + A+    G 
Sbjct: 217 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ 276

Query: 381 ISWGKE------FTLDGLEIKQVVQS 440
           I W +E      F +DG  I  V Q+
Sbjct: 277 IMWKRELGSVNDFIVDGNRIYLVDQN 302



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>YP183_YEAST (Q08924) WD-repeat protein YPL183C|
          Length = 1013

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +3

Query: 159  LSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVL 338
            ++ GK V+T +S   ++RAW +  G++      +T+ A    L ++SN +       L++
Sbjct: 945  INGGKEVIT-TSVDQVIRAWEITAGKLSLVDKKRTTVADTGSLEIISNDEDADSEKTLLI 1003

Query: 339  AG 344
             G
Sbjct: 1004 GG 1005



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>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 799

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 84  SLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWE-TNIQ 260
           +LD R G   WR  ++ +  +  L    G  V+T + GG + +AW    GQ +WE T  Q
Sbjct: 493 ALDAREGADLWR--VQTDAWVYSLQADRGT-VLTATRGGGV-QAWEASAGQKLWEVTGAQ 548

Query: 261 TSSAS 275
           T   S
Sbjct: 549 TDFES 553



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>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +3

Query: 60   LTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQM 239
            L + N+IAS  L +    W+  +   +P++ L+ ++G Y V+    GSI+          
Sbjct: 1331 LPDSNIIASASLDNTIRLWQRPLI--SPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQ 1388

Query: 240  VWETNIQTSSASKSLLHVLSNSKVV 314
            +W       S   SLL  L  +K +
Sbjct: 1389 LWH------SQDGSLLKTLPGNKAI 1407



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>AMPA_PSESM (Q887M0) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 496

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
 Frame = +3

Query: 177 VVTLSSGGSILRAWNLPD-----GQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLA 341
           +V + SGG+I       D     GQ +  TN+Q   A + LL  +     + D  +  +A
Sbjct: 34  LVDIKSGGAISAVLERGDLAGKSGQTLLLTNLQNIKAERVLLVGIGKDGELSDRQLKKIA 93

Query: 342 GQWIYAISSIDGLISWGKEFTLDGLEIK 425
           G     +SS+ GL        LD L +K
Sbjct: 94  GS---VLSSLKGLGGSDAVIALDDLSVK 118



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>HXK1_DROME (Q9NFT9) Hexokinase type 1 (EC 2.7.1.1)|
          Length = 465

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +3

Query: 279 SLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDG--LISWGKEFTLDGLEIKQVVQ 437
           S+ + +   KV +DNL L +A  +     ++D   L+SW KEF   G   K VVQ
Sbjct: 123 SIANFVKEKKVDKDNLPLGIAFAFTLKKLALDVGILVSWTKEFGAQGAIGKDVVQ 177



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>BTNL2_MOUSE (O70355) Butyrophilin-like protein 2 precursor (Fragment)|
          Length = 452

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -3

Query: 252 WFPRPSVHQED----SMPSIYYLPKKG*QHIFQLID*ADQWGYSSQ*HVAKIYLLNEDQE 85
           WFPRP V   D    +MPS     ++G Q +FQ ++        S  +V     L   QE
Sbjct: 386 WFPRPHVQWRDRDGKTMPSFSEAFQQGSQELFQ-VETLLLVTNGSMVNVTCSISLPLGQE 444

Query: 84  KRSHFPLS 61
           K + FPLS
Sbjct: 445 KTARFPLS 452



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>SYIM_MOUSE (Q8BIJ6) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.5) (Isoleucine--tRNA ligase) (IleRS)
          Length = 1012

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +3

Query: 18  VYHTQKSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSG 197
           V+H +      +   T E++I  ++    D++W    E+  P + L+ + G   +  + G
Sbjct: 534 VFHHKTKDEYLINSQTTEHIIKLVEQHGSDVWWTLPAEQLLPAEVLAQAGGPGALEYAPG 593

Query: 198 GSILRAW 218
             IL  W
Sbjct: 594 QDILDIW 600



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>RNC_MYCGE (P47607) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 262

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 15  AVYHTQKSGRRRV-VVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSL 161
           +++  QK    RV V LT  N++ S+    GDI W   I  N   D  S+
Sbjct: 168 SLFQEQKLPEPRVRVSLTSNNLVLSIIELDGDIIWSQAIPNNKNYDDKSV 217



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>UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 515

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 27/135 (20%), Positives = 48/135 (35%)
 Frame = +3

Query: 66  EENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVW 245
           E++V+   D+ SG    R     +  +  +  +A KY +   S     R W++P+G  + 
Sbjct: 100 EDSVVQLFDI-SGKAALRQFSGHSKAVHFVDFTADKYRIVSGSDDYTSRLWDIPNGVEIT 158

Query: 246 ETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLISWGKEFTLDGLEIK 425
             N  T          L+N         L   G + + I   DG           G  ++
Sbjct: 159 SYNEHTDYIRCGCTSALNND--------LFATGSYDHTIKIFDGRTDKSVMSMDHGQPVE 210

Query: 426 QVVQSPENDIVYVVG 470
            V+  P   ++   G
Sbjct: 211 SVLLFPSGGLLVSAG 225



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>DHG_ECOLI (P15877) Quinoprotein glucose dehydrogenase (EC 1.1.5.2) (Glucose|
           dehydrogenase [pyrroloquinoline-quinone])
          Length = 796

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 20/99 (20%)
 Frame = +3

Query: 78  IASLDLRSGDIFWRHVIEKNNPIDQLSL--------------------SAGKYVVTLSSG 197
           I++LDL++ ++ W+  I    P D +                      +AG  +   ++ 
Sbjct: 672 ISALDLKTNEVVWKKRI--GTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATA 729

Query: 198 GSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVV 314
            + LRA+N+ +G+ +W+  +     +  + + ++  + V
Sbjct: 730 DNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYV 768



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>CYSQ_BUCAI (P57624) Protein cysQ homolog|
          Length = 265

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
 Frame = +3

Query: 114 WRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHV 293
           WR +++K   I QL+ SAG  ++ L +    +     PD   + + +   ++  K  L +
Sbjct: 14  WRKMLDK---ICQLARSAGHCIMKLYNSQKFINVSYKPDNTPITDVDYAANNIIKKGLSL 70

Query: 294 LSNSKVV---QDNLVLVLAGQW--IYAISSIDGLISWGK---EFTLD------GLEIKQV 431
           +S    +   +++    +   W   + +  +DG   + K   EFT++      G+ I  V
Sbjct: 71  ISPQIPIISEEESYNFEICRNWNSYWLVDPLDGTKEFLKKNGEFTVNISLIEYGVPILGV 130

Query: 432 VQSPENDIVY 461
           + +P  D++Y
Sbjct: 131 IYAPFFDVLY 140



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>DHGA_ACICA (P05465) Quinoprotein glucose dehydrogenase-A precursor (EC 1.1.5.2)|
            (Glucose dehydrogenase-A [pyrroloquinoline-quinone])
            (Quinoprotein glucose DH) (GDH-A)
          Length = 801

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
 Frame = +3

Query: 78   IASLDLRSGDIFWRHVIE--KNNPIDQLSLSAGKYVV-----TLSSGGSI---------- 206
            +A +DL++ ++ W+  I   +++  +   L A K  V     ++S+ G++          
Sbjct: 679  VAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGGSISTAGNVMFVGATQDNY 738

Query: 207  LRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLIS 386
            LRA+N+ +G+ +WE  +     +  + + ++  + V    V++  G   +     D L++
Sbjct: 739  LRAFNVTNGKKLWEARLPAGGQATPMTYEINGKQYV----VIMAGGHGSFGTKMGDYLVA 794

Query: 387  W 389
            +
Sbjct: 795  Y 795



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>FKBP3_MOUSE (Q62446) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP)
           (FKBP-25) (Rapamycin-selective 25 kDa immunophilin)
          Length = 224

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 198 GSILRAW---NLPDGQMVWETNIQTSSASKSLLHVLS 299
           G ++  W    LPDG  V++TNIQTSS  K     LS
Sbjct: 128 GDVVHCWYTGTLPDGT-VFDTNIQTSSKKKKNAKPLS 163



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>S3TC2_MOUSE (Q80VA5) SH3 domain and tetratricopeptide repeats-containing|
           protein 2
          Length = 1289

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +3

Query: 69  ENVIASLDLRSGDIFWRHVIEKNNPIDQ----LSLSAGKYVVTLSSGGSILRAWNLPDGQ 236
           EN+   L L+ G  F R V     P D+    L+L   + +  LS G S   A +L  GQ
Sbjct: 166 ENIYLGLLLQEGHFFCRAVCSVAQPADKEGEYLTLCKNELISVLSGGESECEAMSLVTGQ 225



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>KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 469

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 117 AKIYLLNEDQEKRSHFPLSRPQHASSHSSE 28
           A ++L+    E  SH PL +P H  SHS +
Sbjct: 184 AFLHLIPHALEPHSHHPLEQPGHGHSHSGQ 213



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>DHG_GLUOX (P27175) Quinoprotein glucose dehydrogenase precursor (EC 1.1.5.2)|
           (Glucose dehydrogenase [pyrroloquinoline-quinone])
          Length = 808

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/102 (15%), Positives = 44/102 (43%), Gaps = 23/102 (22%)
 Frame = +3

Query: 78  IASLDLRSGDIFWRHVIEKNN-------------PIDQLSLSAGKYVVTLSSGGSI---- 206
           +A +DL++  + W+H   +N              P+  + +        LS+ G++    
Sbjct: 683 VAGIDLKTNKVVWQH---RNGTLRDSMYGSSLPIPLPPIKIGVPSLGGPLSTAGNLGFLT 739

Query: 207 ------LRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVV 314
                 +RA+NL  G+++W+  +   + +  + + ++  + +
Sbjct: 740 ASMDYYIRAYNLTTGKVLWQDRLPAGAQATPITYAINGKQYI 781



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>SYY_CHLPN (Q9Z8I2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 412

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 225 PDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLISWGKEFT 404
           P G+    + +QTS    +   + +  +     + LV    W+  IS ID L   GK F 
Sbjct: 76  PSGKQSERSLLQTSEVFDNSQKITACLQRYLPGVTLVNNADWLQEISLIDFLRDIGKHFR 135

Query: 405 LDGLEIKQVVQ 437
           L  + +K  ++
Sbjct: 136 LGQMLVKDTIK 146



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>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143|
          Length = 1191

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +3

Query: 141  PIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQD 320
            PIDQ+++S     +  ++   ++R W+   G +  E     +S S SLL +  N +    
Sbjct: 1081 PIDQIAISPDSQWIATAASDGMVRLWD-QQGNLRGEF----TSTSGSLLGLDFNRQ---- 1131

Query: 321  NLVLVLAGQWIYAISSIDGLISW 389
                   GQW+ A++    L SW
Sbjct: 1132 -------GQWLLAVAQNGDLQSW 1147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,263,420
Number of Sequences: 219361
Number of extensions: 1421350
Number of successful extensions: 3907
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3902
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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