ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27a07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N11, full insert sequence Length = 2975 Score = 325 bits (164), Expect = 8e-86 Identities = 323/376 (85%) Strand = Plus / Plus Query: 105 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 164 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 90 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 149 Query: 165 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 224 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 150 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 209 Query: 225 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 284 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 210 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 269 Query: 285 cgccgagctcgccgtcgaccggtcctccatccgcttccaggactgggcgccgacggaggt 344 ||||||||||||||||||| | |||||| ||||||||||||| | || ||| | ||||| Sbjct: 270 cgccgagctcgccgtcgacggatcctccgtccgcttccaggatttggtgccttccgaggt 329 Query: 345 ggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagctgcccctcgg 404 |||||||||||||||||| |||||| | ||| |||||||||||| ||| ||||| |||| Sbjct: 330 ggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccgatcgg 389 Query: 405 cgagggcgtgctcgccatggacttcaccggcaccctcaacgaccagatgaggggcttcta 464 ||||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| Sbjct: 390 cgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggcttcta 449 Query: 465 caggagcaagtatgag 480 |||||||||||||||| Sbjct: 450 caggagcaagtatgag 465
>ref|XM_450614.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2984 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 243 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 302 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 124 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 183 Query: 303 ccggtcctccatccgcttccaggactgggcgccgacggaggtggtgcagttcgaggagga 362 ||| |||||||||||||||||| | |||||||||||||||| || ||||||||| || Sbjct: 184 ccgcgcctccatccgcttccaggggttggcgccgacggaggtgtcgctgttcgaggacga 243 Query: 363 tgagatcctcgtcctcgggttcggccgggagctgcccctcggcgagggcgtgctcgccat 422 |||||||| || || | ||||| | |||||||||| ||||||||||||||||||||||| Sbjct: 244 cgagatcctggtgctggagttcgacggggagctgccgctcggcgagggcgtgctcgccat 303 Query: 423 ggacttcaccggcaccctcaacgaccagatgagggg 458 |||||||| |||||| |||||||| ||||||||||| Sbjct: 304 ggacttcaacggcacgctcaacgatcagatgagggg 339
>dbj|AK068165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N07, full insert sequence Length = 2985 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 243 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 302 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 125 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 184 Query: 303 ccggtcctccatccgcttccaggactgggcgccgacggaggtggtgcagttcgaggagga 362 ||| |||||||||||||||||| | |||||||||||||||| || ||||||||| || Sbjct: 185 ccgcgcctccatccgcttccaggggttggcgccgacggaggtgtcgctgttcgaggacga 244 Query: 363 tgagatcctcgtcctcgggttcggccgggagctgcccctcggcgagggcgtgctcgccat 422 |||||||| || || | ||||| | |||||||||| ||||||||||||||||||||||| Sbjct: 245 cgagatcctggtgctggagttcgacggggagctgccgctcggcgagggcgtgctcgccat 304 Query: 423 ggacttcaccggcaccctcaacgaccagatgagggg 458 |||||||| |||||| |||||||| ||||||||||| Sbjct: 305 ggacttcaacggcacgctcaacgatcagatgagggg 340
>ref|XM_450615.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2622 Score = 236 bits (119), Expect = 5e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 241 gccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtc 300 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 127 gccgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtc 186 Query: 301 gaccggtcctccatccgcttccaggactgggcgccgacggaggtggtgcagttcgaggag 360 ||||| |||||||||||||||||| || ||||||| |||||||| | |||||||||| Sbjct: 187 gaccgcgcctccatccgcttccagggcttggcgccggcggaggtgtcggtgttcgaggag 246 Query: 361 gatgagatcctcgtcctcgggttcggccgggagctgcccctcggcgagggcgtgctcgcc 420 || |||||||| || || | ||||| | |||||||||| ||||||||||||||||||||| Sbjct: 247 gacgagatcctggtgctggagttcgccggggagctgccgctcggcgagggcgtgctcgcc 306 Query: 421 atggacttcaccggcaccctcaacgaccagatgaggggcttctacag 467 ||| |||| |||||| |||||||| ||||||||||| |||||||| Sbjct: 307 atgaggttcaacggcacgctcaacgatcagatgaggggattctacag 353
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 105 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 164 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 19014664 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 19014723 Query: 165 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 224 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 19014724 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 19014783 Query: 225 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 284 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 19014784 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 19014843 Query: 285 cgccgagctcgccgtcgaccggtcctccatccgcttccagg 325 ||||||||||||||||||| | |||||| |||||||||||| Sbjct: 19014844 cgccgagctcgccgtcgacggatcctccgtccgcttccagg 19014884 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 340 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagctgccc 399 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| ||||| Sbjct: 19015002 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 19015061 Query: 400 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgaccagatgaggggc 459 ||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||| Sbjct: 19015062 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 19015121 Query: 460 ttctacaggag 470 ||||||||||| Sbjct: 19015122 ttctacaggag 19015132
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 105 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 164 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 99584 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 99643 Query: 165 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 224 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 99644 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 99703 Query: 225 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 284 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 99704 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 99763 Query: 285 cgccgagctcgccgtcgaccggtcctccatccgcttccagg 325 ||||||||||||||||||| | |||||| |||||||||||| Sbjct: 99764 cgccgagctcgccgtcgacggatcctccgtccgcttccagg 99804 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 340 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagctgccc 399 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| ||||| Sbjct: 99922 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 99981 Query: 400 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgaccagatgaggggc 459 ||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||| Sbjct: 99982 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 100041 Query: 460 ttctacaggag 470 ||||||||||| Sbjct: 100042 ttctacaggag 100052
>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1051_A08 Length = 137583 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 105 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 164 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 39451 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 39510 Query: 165 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 224 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 39511 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 39570 Query: 225 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 284 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 39571 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 39630 Query: 285 cgccgagctcgccgtcgaccggtcctccatccgcttccagg 325 ||||||||||||||||||| | |||||| |||||||||||| Sbjct: 39631 cgccgagctcgccgtcgacggatcctccgtccgcttccagg 39671 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 340 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagctgccc 399 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| ||||| Sbjct: 39789 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 39848 Query: 400 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgaccagatgaggggc 459 ||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||| Sbjct: 39849 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 39908 Query: 460 ttctacaggag 470 ||||||||||| Sbjct: 39909 ttctacaggag 39919
>ref|XM_482249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2685 Score = 180 bits (91), Expect = 3e-42 Identities = 181/211 (85%) Strand = Plus / Plus Query: 115 atggcggagtcgccggagcagttcaggggccagtcccgcctcccccgattcgccgagccc 174 ||||||| ||||||||||||||| |||||||| | || ||||| || | |||| || Sbjct: 1 atggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtgcgcctccccg 60 Query: 175 ctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctccggctccgcg 234 || ||||||||||| |||||||||||||||||| |||||| |||||||||||||||| Sbjct: 61 ctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctccggctccgcc 120 Query: 235 tcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctc 294 | | |||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 121 gccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgccgccgagctc 180 Query: 295 gccgtcgaccggtcctccatccgcttccagg 325 ||||||||| | |||||| |||||||||||| Sbjct: 181 gccgtcgacggatcctccgtccgcttccagg 211 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 340 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagctgccc 399 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| ||||| Sbjct: 248 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 307 Query: 400 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgaccagatgaggggc 459 ||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||| Sbjct: 308 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 367 Query: 460 ttctacaggag 470 ||||||||||| Sbjct: 368 ttctacaggag 378
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 330 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 389 |||||||||||||||| || ||||||||| || |||||||| || || | ||||| | | Sbjct: 11790402 ggcgccgacggaggtgtcgctgttcgaggacgacgagatcctggtgctggagttcgacgg 11790461 Query: 390 ggagctgcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgacca 449 ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 11790462 ggagctgccgctcggcgagggcgtgctcgccatggacttcaacggcacgctcaacgatca 11790521 Query: 450 gatgagggg 458 ||||||||| Sbjct: 11790522 gatgagggg 11790530 Score = 129 bits (65), Expect = 9e-27 Identities = 80/85 (94%) Strand = Plus / Plus Query: 241 gccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtc 300 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 11799403 gccgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtc 11799462 Query: 301 gaccggtcctccatccgcttccagg 325 ||||| |||||||||||||||||| Sbjct: 11799463 gaccgcgcctccatccgcttccagg 11799487 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 243 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 302 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 11790221 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 11790280 Query: 303 ccggtcctccatccgcttccagg 325 ||| |||||||||||||||||| Sbjct: 11790281 ccgcgcctccatccgcttccagg 11790303 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 330 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 389 ||||||| |||||||| | |||||||||||| |||||||| || || | ||||| | | Sbjct: 11799570 ggcgccggcggaggtgtcggtgttcgaggaggacgagatcctggtgctggagttcgccgg 11799629 Query: 390 ggagctgcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgacca 449 ||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| || Sbjct: 11799630 ggagctgccgctcggcgagggcgtgctcgccatgaggttcaacggcacgctcaacgatca 11799689 Query: 450 gatgaggggcttctacag 467 ||||||||| |||||||| Sbjct: 11799690 gatgaggggattctacag 11799707 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 18959982 cgccgccgagctcgccgtcg 18960001
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 330 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 389 |||||||||||||||| || ||||||||| || |||||||| || || | ||||| | | Sbjct: 33220 ggcgccgacggaggtgtcgctgttcgaggacgacgagatcctggtgctggagttcgacgg 33279 Query: 390 ggagctgcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgacca 449 ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 33280 ggagctgccgctcggcgagggcgtgctcgccatggacttcaacggcacgctcaacgatca 33339 Query: 450 gatgagggg 458 ||||||||| Sbjct: 33340 gatgagggg 33348 Score = 129 bits (65), Expect = 9e-27 Identities = 80/85 (94%) Strand = Plus / Plus Query: 241 gccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtc 300 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 42221 gccgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtc 42280 Query: 301 gaccggtcctccatccgcttccagg 325 ||||| |||||||||||||||||| Sbjct: 42281 gaccgcgcctccatccgcttccagg 42305 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 243 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 302 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33039 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 33098 Query: 303 ccggtcctccatccgcttccagg 325 ||| |||||||||||||||||| Sbjct: 33099 ccgcgcctccatccgcttccagg 33121 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 330 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 389 ||||||| |||||||| | |||||||||||| |||||||| || || | ||||| | | Sbjct: 42388 ggcgccggcggaggtgtcggtgttcgaggaggacgagatcctggtgctggagttcgccgg 42447 Query: 390 ggagctgcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgacca 449 ||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| || Sbjct: 42448 ggagctgccgctcggcgagggcgtgctcgccatgaggttcaacggcacgctcaacgatca 42507 Query: 450 gatgaggggcttctacag 467 ||||||||| |||||||| Sbjct: 42508 gatgaggggattctacag 42525
>ref|XM_464667.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3020 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 256 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 295 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 256 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 295 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cggagcagttcaggggccag 147 |||||||||||||||||||| Sbjct: 128 cggagcagttcaggggccag 147
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 256 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 295 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 6598577 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 6598616 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ccgcgtcggccgccgtcgccg 250 ||||||||||||||||||||| Sbjct: 33365600 ccgcgtcggccgccgtcgccg 33365620 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcga 302 ||||||||||||||||||||| Sbjct: 4966777 cgccgccgagctcgccgtcga 4966757 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctcgtcctccgccccgacctcgc 209 |||| ||||||||||||||||||| Sbjct: 22935054 cctcctcctccgccccgacctcgc 22935031 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cggagcagttcaggggccag 147 |||||||||||||||||||| Sbjct: 6598449 cggagcagttcaggggccag 6598468
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 256 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 295 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 32952 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 32991 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cggagcagttcaggggccag 147 |||||||||||||||||||| Sbjct: 32824 cggagcagttcaggggccag 32843
>dbj|AK066996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089H24, full insert sequence Length = 3020 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 256 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 295 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 256 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 295 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cggagcagttcaggggccag 147 |||||||||||||||||||| Sbjct: 128 cggagcagttcaggggccag 147
>gb|AC010564.7| Drosophila melanogaster 3L BAC RP98-27O1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 196594 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 164485 aacgacaagatgaagggcttctacaggagcaagta 164519
>ref|NM_167887.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RF, transcript variant F (Psa), mRNA Length = 3717 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 980 aacgacaagatgaagggcttctacaggagcaagta 1014
>ref|NM_167886.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RD, transcript variant D (Psa), mRNA Length = 3698 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 961 aacgacaagatgaagggcttctacaggagcaagta 995
>ref|NM_167885.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RA, transcript variant A (Psa), mRNA Length = 3930 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 1193 aacgacaagatgaagggcttctacaggagcaagta 1227
>ref|NM_167884.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RE, transcript variant E (Psa), mRNA Length = 3729 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 992 aacgacaagatgaagggcttctacaggagcaagta 1026
>ref|NM_167883.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RC, transcript variant C (Psa), mRNA Length = 3795 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 1058 aacgacaagatgaagggcttctacaggagcaagta 1092
>ref|NM_139360.2| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RB, transcript variant B (Psa), mRNA Length = 4023 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 1286 aacgacaagatgaagggcttctacaggagcaagta 1320
>gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 of 83 of the complete sequence Length = 302131 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 287521 aacgacaagatgaagggcttctacaggagcaagta 287555
>gb|AC004333.1|AC004333 Drosophila melanogaster DNA sequence (P1 DS05969 (D229)), complete sequence Length = 63178 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||||||||||||||||||||| Sbjct: 47704 aacgacaagatgaagggcttctacaggagcaagta 47670
>gb|BT015180.1| Drosophila melanogaster SD10789 full insert cDNA Length = 4056 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||| ||||||||||||||||| Sbjct: 903 aacgacaagatgaagggattctacaggagcaagta 937
>gb|AF327435.1|AF327435 Drosophila melanogaster puromycin-sensitive aminopeptidase mRNA, complete cds Length = 3656 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 442 aacgaccagatgaggggcttctacaggagcaagta 476 |||||| |||||| ||| ||||||||||||||||| Sbjct: 908 aacgacaagatgaaggggttctacaggagcaagta 942
>ref|XM_473844.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2910 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcgac 303 |||||||||||||||||||||| Sbjct: 309 cgccgccgagctcgccgtcgac 330
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcgac 303 |||||||||||||||||||||| Sbjct: 50238 cgccgccgagctcgccgtcgac 50217
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcgac 303 |||||||||||||||||||||| Sbjct: 35300808 cgccgccgagctcgccgtcgac 35300787 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcgac 303 |||||||||||||||||||||| Sbjct: 30952866 cgccgccgagctcgccgtcgac 30952845
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcgac 303 |||||||||||||||||||||| Sbjct: 129870 cgccgccgagctcgccgtcgac 129849
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcgac 303 |||||||||||||||||||||| Sbjct: 96653 cgccgccgagctcgccgtcgac 96632
>ref|XM_468154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ccgcgtcggccgccgtcgccg 250 ||||||||||||||||||||| Sbjct: 151 ccgcgtcggccgccgtcgccg 131
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 cggcctgcaccttctccggctccgc 233 ||||||||||||||||| ||||||| Sbjct: 26988 cggcctgcaccttctcccgctccgc 27012
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 cggcctgcaccttctccggctccgc 233 ||||||||||||||||| ||||||| Sbjct: 68521 cggcctgcaccttctcccgctccgc 68545
>gb|AC104082.3| Homo sapiens BAC clone RP11-570L13 from 4, complete sequence Length = 182770 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gaagctactgtgttcagaaaa 67 ||||||||||||||||||||| Sbjct: 21600 gaagctactgtgttcagaaaa 21620
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 cggcctgcaccttctccggctccgc 233 ||||||||||||||||| ||||||| Sbjct: 22964508 cggcctgcaccttctcccgctccgc 22964532 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 22308796 cgccgccgagctcgccgtcg 22308815
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 cggccgggagctgcccctcggcgag 408 ||||||||||| ||||||||||||| Sbjct: 2085731 cggccgggagcggcccctcggcgag 2085755
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcga 302 ||||||||||||||||||||| Sbjct: 37903 cgccgccgagctcgccgtcga 37883
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcga 302 ||||||||||||||||||||| Sbjct: 111516 cgccgccgagctcgccgtcga 111496
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ccgcgtcggccgccgtcgccg 250 ||||||||||||||||||||| Sbjct: 106350 ccgcgtcggccgccgtcgccg 106370
>dbj|AK069780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028F19, full insert sequence Length = 3290 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 cggcctgcaccttctccggctccgc 233 ||||||||||||||||| ||||||| Sbjct: 212 cggcctgcaccttctcccgctccgc 188
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 tcctcgtcctcaacgccgccg 289 ||||||||||||||||||||| Sbjct: 2668988 tcctcgtcctcaacgccgccg 2668968
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcga 302 ||||||||||||||||||||| Sbjct: 3247 cgccgccgagctcgccgtcga 3267
>ref|XM_466490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1768 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 cctcgtcctccgccccgacctcgc 209 |||| ||||||||||||||||||| Sbjct: 6 cctcctcctccgccccgacctcgc 29
>ref|NM_191023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 891 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 795 cgccgccgagctcgccgtcg 776
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 5244 cgccgccgagctcgccgtcg 5263
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 cctcggcgagggcgtgctcg 418 |||||||||||||||||||| Sbjct: 2109068 cctcggcgagggcgtgctcg 2109049
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 10431 cgccgccgagctcgccgtcg 10450
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 27684 cgccgccgagctcgccgtcg 27703
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 106583 cgccgccgagctcgccgtcg 106602
>gb|AY639147.1| Stizostedion vitreum vitreum genomic sequence Length = 10284 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gccgccgagctcgccgtcgaccgg 306 ||||||||||||||||||| |||| Sbjct: 8272 gccgccgagctcgccgtcggccgg 8249
>emb|CT025236.2| Xenopus tropicalis finished cDNA, clone TEgg001e05 Length = 659 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tccgcttccaggactgggcg 333 |||||||||||||||||||| Sbjct: 402 tccgcttccaggactgggcg 421
>gb|AC164570.3| Mus musculus BAC clone CH25-194I22 from chromosome 5, complete sequence Length = 103796 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 452 tgaggggcttctacaggagcaagtatga 479 ||||||| | |||||||||||||||||| Sbjct: 53961 tgaggggttactacaggagcaagtatga 53934
>gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete sequence Length = 38345 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tcctcaacgccgccgagctcgccg 298 |||||| ||||||||||||||||| Sbjct: 23810 tcctcaccgccgccgagctcgccg 23833
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctcgccatggacttcaccggcacc 438 |||||||||| ||||||||||||| Sbjct: 68659 ctcgccatgggcttcaccggcacc 68636
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 60972 cgccgccgagctcgccgtcg 60991
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 cggccgccgtcgccgtgtccgcgc 259 ||||||||||||||||| |||||| Sbjct: 507228 cggccgccgtcgccgtggccgcgc 507205
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gccgccgagctcgccgtcga 302 |||||||||||||||||||| Sbjct: 14154294 gccgccgagctcgccgtcga 14154275 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 4922019 cgccgccgagctcgccgtcg 4922038
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cggagcagttcaggggccag 147 |||||||||||||||||||| Sbjct: 12319113 cggagcagttcaggggccag 12319094
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 34362544 cgccgccgagctcgccgtcg 34362525
>gb|AY741536.1| Pennisetum glaucum TEL1 gene, partial sequence Length = 3162 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 305 cgccgccgagctcgccgtcg 324
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gctccgcgtcggccgccgtc 246 |||||||||||||||||||| Sbjct: 3883160 gctccgcgtcggccgccgtc 3883179
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 44888 cgccgccgagctcgccgtcg 44869
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cggagcagttcaggggccag 147 |||||||||||||||||||| Sbjct: 35573 cggagcagttcaggggccag 35554
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cctcgtcctccgccccgacctcgc 209 |||| ||||||||||||||||||| Sbjct: 54856 cctcctcctccgccccgacctcgc 54833
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 16403 cgccgccgagctcgccgtcg 16384
>dbj|AK069742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030E07, full insert sequence Length = 1764 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 cctcgtcctccgccccgacctcgc 209 |||| ||||||||||||||||||| Sbjct: 6 cctcctcctccgccccgacctcgc 29
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gccgccgagctcgccgtcga 302 |||||||||||||||||||| Sbjct: 14108574 gccgccgagctcgccgtcga 14108555 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 4922001 cgccgccgagctcgccgtcg 4922020
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gccgccgagctcgccgtcga 302 |||||||||||||||||||| Sbjct: 80835 gccgccgagctcgccgtcga 80816
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cgccgccgagctcgccgtcg 301 |||||||||||||||||||| Sbjct: 37940 cgccgccgagctcgccgtcg 37921
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gagggcgtgctcgccatgga 425 |||||||||||||||||||| Sbjct: 1941902 gagggcgtgctcgccatgga 1941883 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,292,931 Number of Sequences: 3902068 Number of extensions: 3292931 Number of successful extensions: 73466 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71104 Number of HSP's gapped (non-prelim): 2357 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
