ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO) (... 29 3.8
2MYFB_YEREN (P33407) Chaperone protein myfB precursor 28 5.0
3MIPR_LYMST (Q25410) Putative molluscan insulin-related peptide(s... 28 8.5

>GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)|
           (L-gulono-gamma-lactone oxidase) (GLO)
          Length = 439

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -2

Query: 85  LLELCFW*PPQLMRLVSWQQRFFPW 11
           LLE   W    L RLV W  RFF W
Sbjct: 254 LLEFLLWTSTYLPRLVGWINRFFFW 278



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>MYFB_YEREN (P33407) Chaperone protein myfB precursor|
          Length = 267

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 41  QPHQLRRLPEAKLQKLLWHR 100
           +P QLR+ PE    KL+WHR
Sbjct: 170 RPDQLRQKPEEMAGKLIWHR 189



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>MIPR_LYMST (Q25410) Putative molluscan insulin-related peptide(s) receptor|
            precursor (EC 2.7.10.1) [Contains: Putative molluscan
            insulin-related peptide(s) receptor alpha chain; Putative
            molluscan insulin-related peptide(s) receptor beta chain]
          Length = 1607

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 42   SLISCGGYQKQSSRSFSGTGNGLLTAGVVRDLDLRTSSD 158
            SL  CGG Q +SS  F+G  + L   GV R+  L    D
Sbjct: 1360 SLTPCGGGQFKSSTHFNGGSHTLYDEGVDRETILNGVDD 1398


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,830,491
Number of Sequences: 219361
Number of extensions: 380070
Number of successful extensions: 893
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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