ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl28e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3gb|AF546155.1| Streptomyces macromomyceticus UnbL (unbL), UnbV (... 46 0.099
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.39
5gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genom... 44 0.39
6gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic ... 44 0.39
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
9dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
10dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
11dbj|AK101896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
12dbj|AK072053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
13dbj|AB022602.1| Oryza sativa (japonica cultivar-group) OsASA1 mR... 44 0.39
14ref|XM_450183.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
15ref|NM_190080.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
16ref|XM_472876.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
17gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.5
18gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.5
19emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
20dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.5
21ref|XM_572104.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 1.5
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene 40 6.1
27gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, com... 40 6.1
28ref|XM_466045.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
29gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
30ref|XM_369057.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 6.1
31gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.1
32gb|AC004878.3| Homo sapiens PAC clone RP4-754G14 from 7, complet... 40 6.1
33emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 ... 40 6.1
34emb|AL158830.17| Human DNA sequence from clone RP11-421H8 on chr... 40 6.1
35emb|AL031963.40|HS40E16 Human DNA sequence from clone RP1-40E16 ... 40 6.1
36gb|AC134866.3| Homo sapiens BAC clone RP11-1398B17 from 7, compl... 40 6.1
37emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.1
38gb|AC138783.10| Homo sapiens PAC clone RP5-962D3 from 7, complet... 40 6.1
39emb|AJ428052.3|MSY428052 Malassezia sympodialis mRNA for putativ... 40 6.1
40gb|AC105418.5| Homo sapiens BAC clone RP11-450O3 from 7, complet... 40 6.1
41gb|AC148301.3| Pan troglodytes BAC clone CH251-69O15 from chromo... 40 6.1
42gb|AC006995.5| Homo sapiens BAC clone RP11-396K3 from 7, complet... 40 6.1
43gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, comp... 40 6.1
44gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.1
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
47dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
48dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
49gb|AC005080.2|AC005080 Homo sapiens BAC clone CTA-269P13 from 7q... 40 6.1
50gb|AC005098.2|AC005098 Homo sapiens BAC clone CTA-350L10 from 7q... 40 6.1
51gb|AC004867.5|AC004867 Homo sapiens PAC clone RP4-728P19 from 7,... 40 6.1
52gb|AC134616.4| Homo sapiens PAC clone RP4-630L23 from 7, complet... 40 6.1
53dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.1
54dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
55dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
56emb|BX119923.12| Zebrafish DNA sequence from clone CH211-203B17 ... 40 6.1
57dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
58dbj|AK099944.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
59gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete seq... 40 6.1
60dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
61gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
62emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.1 
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01,
             complete sequence
          Length = 117724

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 313   cggctcccctcctggcgccacgcgctcgacttcttccgctgggccgacgagcagccgggc 372
             |||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 27498 cggctcccgtcctggcgccacgccctcgacttcttccgctgggccgccgaccagccgggc 27439

                                                         
Query: 373   ttccgccactcctgctactcgttcaacgccatggcctcgctcct 416
             ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 27438 ttccgccactcctgctactcgctcaacgccatggcctccctcct 27395



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                   
Query: 187   tccccgtcctacctcgcccaccacctgctcgacgaatt 224
             ||||| ||||||||||||||||||||||||||||||||
Sbjct: 27624 tccccttcctacctcgcccaccacctgctcgacgaatt 27587
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                            
Query: 313      cggctcccctcctggcgccacgcgctcgacttcttccgctgggccgacgagcagccgggc 372
                |||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 14298712 cggctcccgtcctggcgccacgccctcgacttcttccgctgggccgccgaccagccgggc 14298653

                                                            
Query: 373      ttccgccactcctgctactcgttcaacgccatggcctcgctcct 416
                ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 14298652 ttccgccactcctgctactcgctcaacgccatggcctccctcct 14298609



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                      
Query: 187      tccccgtcctacctcgcccaccacctgctcgacgaatt 224
                ||||| ||||||||||||||||||||||||||||||||
Sbjct: 14298838 tccccttcctacctcgcccaccacctgctcgacgaatt 14298801



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 201      cgcccaccacctgctcgacgaatt 224
                ||||||||||||| ||||||||||
Sbjct: 21819512 cgcccaccacctgttcgacgaatt 21819489
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>gb|AF546155.1| Streptomyces macromomyceticus UnbL (unbL), UnbV (unbV), UnbU (unbU),
            PksE (pksE), and TebC (tebC) genes, complete cds
          Length = 10514

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 194  cctacctcgcccaccacctgctcgacg 220
            ||||||||||| |||||||||||||||
Sbjct: 8627 cctacctcgccgaccacctgctcgacg 8653
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 197      acctcgcccaccacctgctcgacgaa 222
                ||||||||||||||||||||| ||||
Sbjct: 34417124 acctcgcccaccacctgctcggcgaa 34417099
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>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete
              sequence
          Length = 117505

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 197    acctcgcccaccacctgctcgacgaa 222
              ||||||||||||||||||||| ||||
Sbjct: 109043 acctcgcccaccacctgctcggcgaa 109068
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>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
             sequence
          Length = 115393

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 197   acctcgcccaccacctgctcgacgaa 222
             ||||||||||||||||||||| ||||
Sbjct: 32570 acctcgcccaccacctgctcggcgaa 32595
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 198      cctcgcccaccacctgctcgac 219
                ||||||||||||||||||||||
Sbjct: 18155436 cctcgcccaccacctgctcgac 18155457



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 198      cctcgcccaccacctgctcgacgaa 222
                |||||||| ||||||||||||||||
Sbjct: 21081412 cctcgcccgccacctgctcgacgaa 21081388



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 201      cgcccaccacctgctcgacg 220
                ||||||||||||||||||||
Sbjct: 21242551 cgcccaccacctgctcgacg 21242532
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 197      acctcgcccaccacctgctcgacgaa 222
                ||||||||||||||||||||| ||||
Sbjct: 34507596 acctcgcccaccacctgctcggcgaa 34507571
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>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0026C08
          Length = 155316

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 198    cctcgcccaccacctgctcgac 219
              ||||||||||||||||||||||
Sbjct: 148558 cctcgcccaccacctgctcgac 148579
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>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0556A05
          Length = 158189

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 198  cctcgcccaccacctgctcgac 219
            ||||||||||||||||||||||
Sbjct: 4160 cctcgcccaccacctgctcgac 4181
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>dbj|AK101896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070P13, full
           insert sequence
          Length = 3359

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 198 cctcgcccaccacctgctcgac 219
           ||||||||||||||||||||||
Sbjct: 452 cctcgcccaccacctgctcgac 473
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>dbj|AK072053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112E10, full
           insert sequence
          Length = 2186

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 197 acctcgcccaccacctgctcgacgaa 222
           ||||||||||||||||||||| ||||
Sbjct: 68  acctcgcccaccacctgctcggcgaa 93
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>dbj|AB022602.1| Oryza sativa (japonica cultivar-group) OsASA1 mRNA for anthranilate
           synthase alpha 1 subunit, complete cds
          Length = 2172

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 197 acctcgcccaccacctgctcgacgaa 222
           ||||||||||||||||||||| ||||
Sbjct: 58  acctcgcccaccacctgctcggcgaa 83
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>ref|XM_450183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1632

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 198 cctcgcccaccacctgctcgacgaa 222
           |||||||| ||||||||||||||||
Sbjct: 483 cctcgcccgccacctgctcgacgaa 507
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>ref|NM_190080.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2751

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 gcccaccacctgctcgacgaa 222
           |||||||||||||||||||||
Sbjct: 148 gcccaccacctgctcgacgaa 168
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>ref|XM_472876.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 486

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  ccggcgcatcgccggcgcgcc 119
           |||||||||||||||||||||
Sbjct: 285 ccggcgcatcgccggcgcgcc 305
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
               sequence
          Length = 1347793

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 129     cttcttcttcaagcccctctc 149
               |||||||||||||||||||||
Sbjct: 1225058 cttcttcttcaagcccctctc 1225038
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      tccggcgcatcgccggcgcgc 118
               |||||||||||||||||||||
Sbjct: 2256356 tccggcgcatcgccggcgcgc 2256336



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     gcgcatcgccggcgcgccca 121
               ||||||||||||||||||||
Sbjct: 4014816 gcgcatcgccggcgcgccca 4014835
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>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18,
             complete sequence
          Length = 176615

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    ccggcgcatcgccggcgcgcc 119
             |||||||||||||||||||||
Sbjct: 22255 ccggcgcatcgccggcgcgcc 22235
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 198     cctcgcccaccacctgctcga 218
               |||||||||||||||||||||
Sbjct: 2335452 cctcgcccaccacctgctcga 2335472
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>ref|XM_572104.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 1676

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  cttcttcttcaagcccctctc 149
            |||||||||||||||||||||
Sbjct: 1259 cttcttcttcaagcccctctc 1239
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 99       ccggcgcatcgccggcgcgcc 119
                |||||||||||||||||||||
Sbjct: 23857382 ccggcgcatcgccggcgcgcc 23857362
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 202      gcccaccacctgctcgacgaa 222
                |||||||||||||||||||||
Sbjct: 41176306 gcccaccacctgctcgacgaa 41176326
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   gcccaccacctgctcgacgaa 222
             |||||||||||||||||||||
Sbjct: 73361 gcccaccacctgctcgacgaa 73381
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone: P0478E02
          Length = 140715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 198    cctcgcccaccacctgctcgacgaa 222
              |||||||| ||||||||||||||||
Sbjct: 102712 cctcgcccgccacctgctcgacgaa 102688
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>gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene
          Length = 40241

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cctcgcccaccacctgctcg 217
            ||||||||||||||||||||
Sbjct: 7680 cctcgcccaccacctgctcg 7699
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>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence
          Length = 189760

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    ctcccacaggcagcagagcc 176
              ||||||||||||||||||||
Sbjct: 144855 ctcccacaggcagcagagcc 144836
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>ref|XM_466045.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1622

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 cgcccaccacctgctcgacg 220
           ||||||||||||||||||||
Sbjct: 174 cgcccaccacctgctcgacg 193
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>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0012G21, complete sequence
          Length = 135750

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   cgcccaccacctgctcgacgaatt 224
             ||||||||||||| ||||||||||
Sbjct: 71921 cgcccaccacctgttcgacgaatt 71898
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>ref|XM_369057.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00187.4) partial mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 cgcccaccacctgctcgacg 220
           ||||||||||||||||||||
Sbjct: 631 cgcccaccacctgctcgacg 612
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     ccggcgcatcgccggcgcgc 118
              ||||||||||||||||||||
Sbjct: 677772 ccggcgcatcgccggcgcgc 677753
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>gb|AC004878.3| Homo sapiens PAC clone RP4-754G14 from 7, complete sequence
          Length = 110684

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ccctctctactcttctccca 162
             ||||||||||||||||||||
Sbjct: 63039 ccctctctactcttctccca 63020
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>emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 phosphinothricin
            tripeptide biosynthetic gene cluster:  ORFB1, ORFB2,
            ORF1, phsB gene, ORFM, phsC gene, pmi gene, adhP gene,
            ORF3, pgdP gene, ppm gene, ppd gene, ORFx, pgmP gene,
            cpps gene, cppm gene, aldP gene, pmet gene, pms gene,
            phsA gene, pat gene, dea gene, the1 gene, the2 gene, trs
            gene, prpA gene, ORFE1, ORFE2 and ORFE3 (partial)
          Length = 37823

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cctcgcccaccacctgctcg 217
            ||||||||||||||||||||
Sbjct: 9296 cctcgcccaccacctgctcg 9315
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>emb|AL158830.17| Human DNA sequence from clone RP11-421H8 on chromosome 9 Contains the 3'
              end of the RECK gene for reversion-inducing-cysteine-rich
              protein with kazal motifs (ST15, hRECK),  the C9orf19 gene
              for ,chromosome 9 open reading frame 19 (GAPR-1, GLIPR2),
              the CCIN gene for calicin, the CLTA gene for clathrin,
              light polypeptide (LCA), the gene for
              UDP-N-acetylglucosamine-2-epimerase/N-acetylmannosamine
              kinase (NM, DMRV, IBM2, GLCNE)(GNE) and five CpG islands,
              complete sequence
          Length = 191436

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    cccctctctactcttctccc 161
              ||||||||||||||||||||
Sbjct: 105429 cccctctctactcttctccc 105448
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>emb|AL031963.40|HS40E16 Human DNA sequence from clone RP1-40E16 on chromosome 6p24.1-25.3
             Contains the gene for a novel protein similar to D.
             melanogaster CG5327, a pseudogene similar to serine
             proteinase inhibitor (SERPINB8), two putative novel genes,
             the RIPK1 gene for receptor (TNFRSF)-interacting
             serine-threonine kinase 1, the BPHL gene for biphenyl
             hydrolase-like protein (serine hydrolase), the gene for a
             novel protein similar to tubulin beta polypeptide (TUBB),
             a tubulin beta polypeptide (TUBB) pseudogene, the 3' end
             of a novel gene and CpG islands, complete sequence
          Length = 149546

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaagaaaaacccgagagtccacc 24
             ||||||||||||| ||||||||||
Sbjct: 91322 aaaagaaaaaccctagagtccacc 91299
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>gb|AC134866.3| Homo sapiens BAC clone RP11-1398B17 from 7, complete sequence
          Length = 172963

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ccctctctactcttctccca 162
             ||||||||||||||||||||
Sbjct: 15225 ccctctctactcttctccca 15206
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      ccggcgcatcgccggcgcgc 118
               ||||||||||||||||||||
Sbjct: 1996855 ccggcgcatcgccggcgcgc 1996836
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>gb|AC138783.10| Homo sapiens PAC clone RP5-962D3 from 7, complete sequence
          Length = 176141

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    ccctctctactcttctccca 162
              ||||||||||||||||||||
Sbjct: 146563 ccctctctactcttctccca 146582
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>emb|AJ428052.3|MSY428052 Malassezia sympodialis mRNA for putative heat shock protein (hsp
            gene)
          Length = 2461

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  cacgtcgtccttcttcttca 139
            ||||||||||||||||||||
Sbjct: 2208 cacgtcgtccttcttcttca 2189
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>gb|AC105418.5| Homo sapiens BAC clone RP11-450O3 from 7, complete sequence
          Length = 195834

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ccctctctactcttctccca 162
              ||||||||||||||||||||
Sbjct: 100750 ccctctctactcttctccca 100731
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>gb|AC148301.3| Pan troglodytes BAC clone CH251-69O15 from chromosome 7, complete
              sequence
          Length = 166304

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    ccctctctactcttctccca 162
              ||||||||||||||||||||
Sbjct: 135518 ccctctctactcttctccca 135537
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>gb|AC006995.5| Homo sapiens BAC clone RP11-396K3 from 7, complete sequence
          Length = 211531

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    ccctctctactcttctccca 162
              ||||||||||||||||||||
Sbjct: 152441 ccctctctactcttctccca 152460
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>gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, complete sequence
          Length = 275197

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ccctctctactcttctccca 162
              ||||||||||||||||||||
Sbjct: 192899 ccctctctactcttctccca 192880
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ccggcgcatcgccggcgcgc 118
              ||||||||||||||||||||
Sbjct: 804795 ccggcgcatcgccggcgcgc 804814
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 201      cgcccaccacctgctcgacgaatt 224
                ||||||||||||| ||||||||||
Sbjct: 17831436 cgcccaccacctgttcgacgaatt 17831413
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 205      caccacctgctcgacgaatt 224
                ||||||||||||||||||||
Sbjct: 11666887 caccacctgctcgacgaatt 11666868
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 201      cgcccaccacctgctcgacgaatt 224
                ||||| ||||||||||||||||||
Sbjct: 23813756 cgcccgccacctgctcgacgaatt 23813733
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      cgcccaccacctgctcgacg 220
                ||||||||||||||||||||
Sbjct: 19279755 cgcccaccacctgctcgacg 19279774
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>gb|AC005080.2|AC005080 Homo sapiens BAC clone CTA-269P13 from 7q11.2, complete sequence
          Length = 124526

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  ccctctctactcttctccca 162
            ||||||||||||||||||||
Sbjct: 9519 ccctctctactcttctccca 9500
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>gb|AC005098.2|AC005098 Homo sapiens BAC clone CTA-350L10 from 7q11.2, complete sequence
          Length = 230552

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ccctctctactcttctccca 162
              ||||||||||||||||||||
Sbjct: 206047 ccctctctactcttctccca 206028
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>gb|AC004867.5|AC004867 Homo sapiens PAC clone RP4-728P19 from 7, complete sequence
          Length = 143737

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ccctctctactcttctccca 162
             ||||||||||||||||||||
Sbjct: 36729 ccctctctactcttctccca 36748
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>gb|AC134616.4| Homo sapiens PAC clone RP4-630L23 from 7, complete sequence
          Length = 136431

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ccctctctactcttctccca 162
             ||||||||||||||||||||
Sbjct: 11504 ccctctctactcttctccca 11485
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cgacgagcagccgggcttcc 376
              ||||||||||||||||||||
Sbjct: 166713 cgacgagcagccgggcttcc 166694
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   cgcccaccacctgctcgacgaatt 224
             ||||| ||||||||||||||||||
Sbjct: 53421 cgcccgccacctgctcgacgaatt 53398
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>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0680C01
          Length = 145580

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   caccacctgctcgacgaatt 224
             ||||||||||||||||||||
Sbjct: 25046 caccacctgctcgacgaatt 25027
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>emb|BX119923.12| Zebrafish DNA sequence from clone CH211-203B17 in linkage group 23,
              complete sequence
          Length = 159232

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    acctcgcccaccacctgctc 216
              ||||||||||||||||||||
Sbjct: 141473 acctcgcccaccacctgctc 141454
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   cgcccaccacctgctcgacg 220
             ||||||||||||||||||||
Sbjct: 47553 cgcccaccacctgctcgacg 47572
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>dbj|AK099944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122D20, full
           insert sequence
          Length = 1621

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 cgcccaccacctgctcgacg 220
           ||||||||||||||||||||
Sbjct: 173 cgcccaccacctgctcgacg 192
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>gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete sequence
          Length = 209382

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ccctctctactcttctccca 162
             ||||||||||||||||||||
Sbjct: 85798 ccctctctactcttctccca 85817
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>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone: P0705E11
          Length = 140729

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    cgcccaccacctgctcgacg 220
              ||||||||||||||||||||
Sbjct: 113308 cgcccaccacctgctcgacg 113289
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 201      cgcccaccacctgctcgacgaatt 224
                ||||||||||||| ||||||||||
Sbjct: 17757755 cgcccaccacctgttcgacgaatt 17757732
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>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142246

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   cgcccaccacctgctcgacgaatt 224
             ||||||||||||| ||||||||||
Sbjct: 50634 cgcccaccacctgttcgacgaatt 50611


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,467,898
Number of Sequences: 3902068
Number of extensions: 2467898
Number of successful extensions: 66931
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65805
Number of HSP's gapped (non-prelim): 1126
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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