ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl29c04 |
|---|---|
| Clone Library Name | barley_pub |
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 38.9 bits (89), Expect = 0.007 Identities = 17/55 (30%), Positives = 33/55 (60%) Frame = +1 Query: 301 AEYVEPLYDSFFCPLTNKVMVDPVTTESGVTYDRRTIEEYFDNLTDDSEHVICPV 465 +++++ L + CP+ +MV PV+ + G T+ + I YF+++ D + ICPV Sbjct: 3 SQFMKNLKEEVTCPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPV 57
>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box| domain protein 14) Length = 632 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1 Query: 298 VAEYVEPLYDSFF-CPLTNKVMVDPVTTESGVTYDRRTIEEYFDNLTDDSEHVICP 462 V+ + P+ +F CP++ ++M DPV +G TY+R +I+++ D+ H CP Sbjct: 240 VSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-----DAGHKTCP 290
>RNF37_HUMAN (O94941) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (U-box domain-containing protein 5) Length = 541 Score = 37.4 bits (85), Expect = 0.019 Identities = 26/97 (26%), Positives = 48/97 (49%) Frame = +1 Query: 127 RSCDGYSEGDMTIVVANDRPKRRALHDGDMPRLVDFLQGMYHESHEFGGQSFSSLPEVAE 306 ++C + +V + + P+ AL +P D G ES Q+ SSL ++AE Sbjct: 199 KTCSQEVIDSILLVTSENLPQDVALQAPALPMESDCDPGDQPESQ----QAPSSLQKLAE 254 Query: 307 YVEPLYDSFFCPLTNKVMVDPVTTESGVTYDRRTIEE 417 ++ + + F P+T ++M P+ SG D+ T+E+ Sbjct: 255 IIQDVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEK 291
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 37.0 bits (84), Expect = 0.025 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +1 Query: 325 DSFFCPLTNKVMVDPVTTESGVTYDRRTIEEYFDNLTDDSEHVICP 462 D F CP++ ++M DPV +G TY+R IE++ S H CP Sbjct: 275 DEFRCPISLELMKDPVIVSTGQTYERACIEKWI-----ASGHHTCP 315
>NRIP1_MOUSE (Q8CBD1) Nuclear receptor-interacting protein 1 (Nuclear factor| RIP140) (Receptor-interacting protein 140) Length = 1161 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = -2 Query: 241 PAGSP-PTLACHRRAVLFSWAYHLQQLSSYH---PQNSHR 134 PA SP P++AC + A+L S HLQQ S H QN+H+ Sbjct: 254 PAASPKPSVACSQLALLLSSEAHLQQYSREHALKTQNAHQ 293
>RNF37_MOUSE (Q925F4) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (UbcM4-interacting protein 5) (U-box domain-containing protein 5) Length = 539 Score = 32.3 bits (72), Expect = 0.62 Identities = 23/97 (23%), Positives = 43/97 (44%) Frame = +1 Query: 127 RSCDGYSEGDMTIVVANDRPKRRALHDGDMPRLVDFLQGMYHESHEFGGQSFSSLPEVAE 306 R+C + ++ + P+ LH +P D G ES S +L +++E Sbjct: 199 RTCSQEVINSVLLIASESLPQDLDLHAPALPMESDCDPGGQSESQH----SPCTLQDMSE 254 Query: 307 YVEPLYDSFFCPLTNKVMVDPVTTESGVTYDRRTIEE 417 + + F P+T ++M P+ SG D+ T+E+ Sbjct: 255 VESDVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEK 291
>ZN238_RAT (Q9JKY3) Zinc finger protein 238 (Transcriptional repressor RP58)| (58 kDa repressor protein) (rRP58) Length = 522 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 Query: 268 GGQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDP 369 GG S LP V+ + P F CPL NKV P Sbjct: 349 GGMESSLLPYVSNILSPAGQIFMCPLCNKVFPSP 382
>ZN238_HUMAN (Q99592) Zinc finger protein 238 (Transcriptional repressor RP58)| (58 kDa repressor protein) (Zinc finger protein C2H2-171) (Translin-associated zinc finger protein 1) (TAZ-1) (Zinc finger and BTB domain-containing protein 18) Length = 522 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 Query: 268 GGQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDP 369 GG S LP V+ + P F CPL NKV P Sbjct: 349 GGMESSLLPYVSNILSPAGQIFMCPLCNKVFPSP 382
>RPOC_LACSS (Q38UQ3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1214 Score = 32.0 bits (71), Expect = 0.80 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +1 Query: 220 RLVDFLQGMYHESHEFG---GQSFSSLPEVAEYVEPLYDSFF--CPLTNKVMVDPVTTES 384 RLVD Q + + G G SL E E +EPLYD CP+ K +V+P T E Sbjct: 803 RLVDVAQDVIIREEDCGTDRGLLIHSLREGNEMIEPLYDRLVGRCPM--KTIVNPTTGEV 860 Query: 385 GVTYDRRTIEEYFDNLTD 438 V ++ E+ + D Sbjct: 861 MVAKNQLMDEQLAQAVVD 878
>ZN238_MOUSE (Q9WUK6) Zinc finger protein 238 (Zfp-238) (Transcriptional| repressor RP58) (58 kDa repressor protein) Length = 522 Score = 32.0 bits (71), Expect = 0.80 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 Query: 268 GGQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDP 369 GG S LP V+ + P F CPL NKV P Sbjct: 349 GGMENSLLPYVSNILSPAGQIFMCPLCNKVFPSP 382
>TILS_PROMA (Q7V9L9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 336 Score = 32.0 bits (71), Expect = 0.80 Identities = 21/83 (25%), Positives = 39/83 (46%) Frame = +1 Query: 211 DMPRLVDFLQGMYHESHEFGGQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTESGV 390 D+ R+ ++ ++H H + QS E+ E+ + SFFC TNK V T E Sbjct: 54 DLQRIYEWKVHVWHGDHGWHNQSRQIAEELEEWCKCQKLSFFCNRTNKQKVS--TEEDAR 111 Query: 391 TYDRRTIEEYFDNLTDDSEHVIC 459 + +++ + L+ +S + C Sbjct: 112 NWRYKSLIQQAKTLSKESPSLPC 134
>UBE4_CAEEL (Q09349) Probable ubiquitin conjugation factor E4| Length = 980 Score = 32.0 bits (71), Expect = 0.80 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +1 Query: 274 QSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTESGVTYDRRTIEEY 420 + + + E+ E + + + F P+ + +MVDPV SG DR IE + Sbjct: 891 KEYEAKAELEEEYDDVPEEFKDPIMDAIMVDPVKLPSGHVMDRAVIERH 939
>RPOC_OENOE (P95405) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1004 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = +1 Query: 220 RLVDFLQGMYHESHEFG---GQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTESGV 390 RLVD Q + + G G S++ + E +EPLYD K ++DP T E Sbjct: 742 RLVDVAQEVIVREEDCGTDRGLDVSAIMDGNEVIEPLYDRILGRYAMKPVIDPKTGEVIA 801 Query: 391 TYDRRTIEEYFDNLTD 438 ++ E D + D Sbjct: 802 KKNQMIDEHVADQIID 817
>ODD_DROME (P23803) Protein odd-skipped| Length = 392 Score = 31.6 bits (70), Expect = 1.0 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 5/71 (7%) Frame = -2 Query: 313 QHTLRLQGVN*TTAHQTHETHGTFPAGSPPTLACHRRAVLFSW-----AYHLQQLSSYHP 149 QH L LQ HQ + + +P S +A H++ ++ W Y QQ HP Sbjct: 93 QHRLWLQMQQQQQQHQAPQQYPVYPTASADPVAVHQQ-LMNHWIRNAAIYQQQQQQQQHP 151 Query: 148 QNSHRRNADHY 116 + H H+ Sbjct: 152 HHHHHHGHPHH 162
>STUB1_MOUSE (Q9WUD1) STIP1 homology and U box-containing protein 1 (EC 6.3.2.-)| (STIP1 homology and U-box-containing protein 1) (Carboxy terminus of Hsp70-interacting protein) (E3 ubiquitin protein ligase CHIP) Length = 304 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 352 KVMVDPVTTESGVTYDRRTIEEYFDNL 432 ++M +P T SG+TYDR+ IEE+ + Sbjct: 239 ELMREPCITPSGITYDRKDIEEHLQRV 265
>STUB1_HUMAN (Q9UNE7) STIP1 homology and U box-containing protein 1 (EC 6.3.2.-)| (STIP1 homology and U-box-containing protein 1) (Carboxy terminus of Hsp70-interacting protein) (E3 ubiquitin protein ligase CHIP) (CLL-associated antigen KW-8) (Antigen NY-C Length = 303 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 352 KVMVDPVTTESGVTYDRRTIEEYFDNL 432 ++M +P T SG+TYDR+ IEE+ + Sbjct: 238 ELMREPCITPSGITYDRKDIEEHLQRV 264
>STUB1_CHICK (Q5ZHY5) STIP1 homology and U box-containing protein 1 (EC 6.3.2.-)| (STIP1 homology and U-box-containing protein 1) Length = 314 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 352 KVMVDPVTTESGVTYDRRTIEEYFDNL 432 ++M +P T SG+TYDR+ IEE+ + Sbjct: 249 ELMREPCITPSGITYDRKDIEEHLQRV 275
>NRIP1_HUMAN (P48552) Nuclear receptor-interacting protein 1 (Nuclear factor| RIP140) (Receptor-interacting protein 140) Length = 1158 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -2 Query: 241 PAGSP-PTLACHRRAVLFSWAYHLQQLSSYHPQNSHRRN 128 PA SP P++AC + A+L S HLQQ S H + N Sbjct: 253 PATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNAN 291
>RPOC_PEDAC (P77917) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1055 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 7/76 (9%) Frame = +1 Query: 220 RLVDFLQGMYHESHEFG---GQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTE--- 381 RLVD Q + + G G +++ E E +EPLYD T K +++P T + Sbjct: 803 RLVDVAQDVIVREKDCGTDRGLLITAIAEGNEMIEPLYDRILGRYTMKSVINPETGKVIV 862 Query: 382 -SGVTYDRRTIEEYFD 426 D R+ +E D Sbjct: 863 GQNEMIDERSAQEIID 878
>RPOC_LACAC (Q5FM96) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1217 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +1 Query: 220 RLVDFLQGMYHESHEFG---GQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTESGV 390 RLVD Q + + G G + S++ E E +EPL+D T + + DP T E+ V Sbjct: 806 RLVDVAQDVIIRDDDCGTDRGITVSAIMEGDEMIEPLFDRLVGRFTAETVKDPETGEAIV 865 Query: 391 TYD 399 D Sbjct: 866 GRD 868
>RPOC_LACJO (Q74L94) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1224 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +1 Query: 220 RLVDFLQGMYHESHEFG---GQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTE 381 RLVD Q + + G G + ++ E E +EPL+D T+K + DP T E Sbjct: 804 RLVDVAQDVIIREEDCGTDRGLTVHAITEGDEMIEPLFDRLVGRYTSKSVYDPETHE 860
>RPOC_LACPL (Q88XZ2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1213 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +1 Query: 220 RLVDFLQGMYHESHEFG---GQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVT 375 RLVD Q + + G G ++ E E +EPLYD T K + DP T Sbjct: 803 RLVDVAQDVIVREKDCGTDRGLRIHAIMEGNEVIEPLYDRILGRYTMKTVFDPET 857
>FPR1_PODAN (P35693) MAT+ sexual cell fertilization promoting factor| Length = 402 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +1 Query: 184 PKRRALHDGDMPRLVDFLQGMYHESHEFGGQSFSSLPEVAEYVEPLYDSFFCPLTN-KVM 360 P + D D+ L+D H F GQ +P+VA ++ P+ + PL + + + Sbjct: 295 PNQEITKDNDVSHLID-------PPHVFSGQITELMPDVANFLPPMIREGWSPLHDFRAV 347 Query: 361 VDPVTTESGV 390 ++ T +GV Sbjct: 348 LNGHTGNNGV 357
>PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6 precursor| (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 937 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +1 Query: 37 ASAFGSNRCADAAAGTHLQVTGNGQHHSDQRSCDGYSEGDMTIVVAN 177 A +G + + +GNG D SCDGY+ TI V++ Sbjct: 306 AFEYGIKKGRQGLGSIFVWASGNGGREGDHCSCDGYTNSIYTISVSS 352
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 6/58 (10%) Frame = +1 Query: 250 HESHEFGGQSFSSLPEVAEYVEPLYDS------FFCPLTNKVMVDPVTTESGVTYDRR 405 H +S SLPE E EPL + C L V DPV T G T+ RR Sbjct: 96 HSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRR 153
>SYL_COXBU (Q83DY1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 820 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 343 LTNKVMVDPVTTESGVTYDRRTIEEYFDNLTDDSEHVI 456 L N+ +VD SG +RR I ++F +TD SE ++ Sbjct: 166 LANEQIVDGRGWRSGAVVERREISQWFLKITDYSEELL 203
>PCSK6_HUMAN (P29122) Proprotein convertase subtilisin/kexin type 6 precursor| (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 969 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +1 Query: 37 ASAFGSNRCADAAAGTHLQVTGNGQHHSDQRSCDGYSEGDMTIVVAN 177 A +G + + +GNG D SCDGY+ TI V++ Sbjct: 325 AFEYGIKKGRQGLGSIFVWASGNGGREGDYCSCDGYTNSIYTISVSS 371
>SYR_SALTY (P74871) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 577 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = +1 Query: 187 KRRALHDGDMPRLVDFLQGMYHESHEFGGQSFSSLPEVAEYVEPLY--DSFFCPLTNKVM 360 K++ + GDM L D L+G Y ++ + + + YV L D++F + K + Sbjct: 175 KQQQENAGDMA-LAD-LEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRK-L 231 Query: 361 VDPVTTESGVTYDRRTIEEYFDNLTDDS 444 VD T++ +TYDR + D++ +S Sbjct: 232 VDITMTQNQITYDRLNVTLTRDDVMGES 259
>SYR_SALTI (Q8Z5V7) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 577 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = +1 Query: 187 KRRALHDGDMPRLVDFLQGMYHESHEFGGQSFSSLPEVAEYVEPLY--DSFFCPLTNKVM 360 K++ + GDM L D L+G Y ++ + + + YV L D++F + K + Sbjct: 175 KQQQENAGDMA-LAD-LEGFYRDAKKHYDEDETFAERARNYVVKLQSGDTYFREMWRK-L 231 Query: 361 VDPVTTESGVTYDRRTIEEYFDNLTDDS 444 VD T++ +TYDR + D++ +S Sbjct: 232 VDITMTQNQITYDRLNVTLTRDDVMGES 259
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 6/58 (10%) Frame = +1 Query: 250 HESHEFGGQSFSSLPEVAEYVEPLYDS------FFCPLTNKVMVDPVTTESGVTYDRR 405 H +S SLPE E EPL + C L V DPV T G T+ RR Sbjct: 20 HSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRR 77
>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1054 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +1 Query: 220 RLVDFLQGMYH---ESHEFGGQSFSSLPEVAEYVEPLYDSFFCPLTNKVMVDPVTTESGV 390 RLVD Q + + H G +++ E +EPLY+ K + DP T E+ V Sbjct: 737 RLVDVAQDVIIRELDCHSDRGLDVTAIMNGNEVIEPLYERILGRYAQKSVFDPETGETLV 796 Query: 391 TYDRRTIEE 417 ++ E+ Sbjct: 797 NHNEMITED 805
>FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 precursor (EC| 3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1) Length = 1269 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/76 (21%), Positives = 31/76 (40%) Frame = +1 Query: 49 GSNRCADAAAGTHLQVTGNGQHHSDQRSCDGYSEGDMTIVVANDRPKRRALHDGDMPRLV 228 G+ + + +GNG D +CDGY+ T+ +++ A +G +P Sbjct: 496 GTTKGRGGKGSIFIWASGNGGREQDNCNCDGYTNSIWTLSISS------ATEEGHVPWYS 549 Query: 229 DFLQGMYHESHEFGGQ 276 + ++ GGQ Sbjct: 550 EKCSSTLATTYSSGGQ 565
>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC| 3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1) Length = 1101 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/76 (21%), Positives = 31/76 (40%) Frame = +1 Query: 49 GSNRCADAAAGTHLQVTGNGQHHSDQRSCDGYSEGDMTIVVANDRPKRRALHDGDMPRLV 228 G+ + + +GNG D +CDGY+ T+ +++ A +G +P Sbjct: 496 GTTKGRGGKGSIFIWASGNGGREQDNCNCDGYTNSIWTLSISS------ATEEGHVPWYS 549 Query: 229 DFLQGMYHESHEFGGQ 276 + ++ GGQ Sbjct: 550 EKCSSTLATTYSSGGQ 565
>UBE4A_PONPY (Q5R9G3) Ubiquitin conjugation factor E4 A| Length = 1066 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%) Frame = +1 Query: 274 QSFSSLPEVAEYVEPLY----DSFFCPLTNKVMVDPVTTESG-VTYDRRTIEEYFDNLTD 438 + SL ++ + E Y D F P+ + +M DPV S VT DR TI + L+D Sbjct: 969 ERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHL--LSD 1026 Query: 439 DSE 447 ++ Sbjct: 1027 QTD 1029
>UBE4A_HUMAN (Q14139) Ubiquitin conjugation factor E4 A| Length = 1066 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%) Frame = +1 Query: 274 QSFSSLPEVAEYVEPLY----DSFFCPLTNKVMVDPVTTESG-VTYDRRTIEEYFDNLTD 438 + SL ++ + E Y D F P+ + +M DPV S VT DR TI + L+D Sbjct: 969 ERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHL--LSD 1026 Query: 439 DSE 447 ++ Sbjct: 1027 QTD 1029 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,485,478 Number of Sequences: 219361 Number of extensions: 1425768 Number of successful extensions: 4214 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4083 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4214 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
