ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl29d02 |
|---|---|
| Clone Library Name | barley_pub |
>CLH_DICDI (P25870) Clathrin heavy chain| Length = 1694 Score = 197 bits (502), Expect = 8e-51 Identities = 93/155 (60%), Positives = 122/155 (78%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYIE+AA+ Q KEVER+ R+SN+YD EKT++FL EAKLPD PLI VCDR+ F+ DL Sbjct: 729 HFKYIEAAAKINQFKEVERMCRDSNYYDPEKTRDFLKEAKLPDQLPLIIVCDRYEFISDL 788 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 T+YLY NN+ +YIE YVQK+NP N PLVVG LLD +C ED+++ LI+SVR++ P + LV+ Sbjct: 789 TNYLYKNNLSKYIEAYVQKINPVNTPLVVGALLDLDCQEDYLRNLIMSVRNMCPADSLVE 848 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 + EKRNRL+LL +LE V+EG + +HNAL K+ Sbjct: 849 QVEKRNRLKLLLPWLEARVAEGNIEPAIHNALAKI 883
>CLH1_HUMAN (Q00610) Clathrin heavy chain 1 (CLH-17)| Length = 1674 Score = 185 bits (469), Expect = 6e-47 Identities = 94/155 (60%), Positives = 111/155 (71%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYI++A +TGQIKEVER+ RESN YD E+ KNFL EAKL D PLI VCDRF FV DL Sbjct: 727 HFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDL 786 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY NN+ +YIE YVQKVNP P+V+G LLD +C ED IK LIL VR + LV Sbjct: 787 VLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVA 846 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE + EG ++ HNAL K+ Sbjct: 847 EVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKI 881
>CLH_MOUSE (Q68FD5) Clathrin heavy chain| Length = 1675 Score = 185 bits (469), Expect = 6e-47 Identities = 94/155 (60%), Positives = 111/155 (71%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYI++A +TGQIKEVER+ RESN YD E+ KNFL EAKL D PLI VCDRF FV DL Sbjct: 728 HFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDL 787 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY NN+ +YIE YVQKVNP P+V+G LLD +C ED IK LIL VR + LV Sbjct: 788 VLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVA 847 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE + EG ++ HNAL K+ Sbjct: 848 EVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKI 882
>CLH_BOVIN (P49951) Clathrin heavy chain| Length = 1675 Score = 185 bits (469), Expect = 6e-47 Identities = 94/155 (60%), Positives = 111/155 (71%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYI++A +TGQIKEVER+ RESN YD E+ KNFL EAKL D PLI VCDRF FV DL Sbjct: 728 HFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDL 787 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY NN+ +YIE YVQKVNP P+V+G LLD +C ED IK LIL VR + LV Sbjct: 788 VLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVA 847 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE + EG ++ HNAL K+ Sbjct: 848 EVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKI 882
>CLH_RAT (P11442) Clathrin heavy chain| Length = 1675 Score = 183 bits (464), Expect = 2e-46 Identities = 93/155 (60%), Positives = 111/155 (71%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYI++A +TGQIKEVER+ RESN YD E+ KNFL EAKL D PLI VCDRF FV DL Sbjct: 728 HFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDL 787 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY N++ +YIE YVQKVNP P+V+G LLD +C ED IK LIL VR + LV Sbjct: 788 VLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVA 847 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE + EG ++ HNAL K+ Sbjct: 848 EVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKI 882
>CLH_DROME (P29742) Clathrin heavy chain| Length = 1678 Score = 181 bits (459), Expect = 8e-46 Identities = 93/155 (60%), Positives = 110/155 (70%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYI++A +T QIKEVER+ RESN Y+ E+ KNFL EAKL D PLI VCDRF FV DL Sbjct: 729 HFKYIQAACKTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDL 788 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY NN+ +YIE YVQKVNP P+VVG LLD +C ED IK LIL V+ + LV+ Sbjct: 789 VLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQFSTDELVE 848 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE V EG + HNAL K+ Sbjct: 849 EVEKRNRLKLLLPWLESRVHEGCVEPATHNALAKI 883
>CLH2_HUMAN (P53675) Clathrin heavy chain 2 (CLH-22)| Length = 1640 Score = 181 bits (459), Expect = 8e-46 Identities = 91/155 (58%), Positives = 111/155 (71%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 H KYI++A +TGQIKEVER+ RES+ Y+ E+ KNFL EAKL D PLI VCDRFGFV DL Sbjct: 728 HLKYIQAACKTGQIKEVERICRESSCYNPERVKNFLKEAKLTDQLPLIIVCDRFGFVHDL 787 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY NN+ RYIE YVQKVNP P V+G LLD +C E+ IK LI++VR + LV Sbjct: 788 VLYLYRNNLQRYIEIYVQKVNPSRTPAVIGGLLDVDCSEEVIKHLIMAVRGQFSTDELVA 847 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE + EG ++ HNAL K+ Sbjct: 848 EVEKRNRLKLLLPWLESQIQEGCEEPATHNALAKI 882
>CLH_CAEEL (P34574) Probable clathrin heavy chain protein 1| Length = 1681 Score = 178 bits (451), Expect = 7e-45 Identities = 89/155 (57%), Positives = 108/155 (69%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL 180 HFKYI++A RTGQIKEVER+ RES YDAE+ KNFL EAKL D PLI VCDR V DL Sbjct: 730 HFKYIQAATRTGQIKEVERICRESQCYDAERVKNFLKEAKLNDQLPLIIVCDRHNMVHDL 789 Query: 181 THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVD 360 YLY N + +YIE +VQKVN P+VVG LLD +C ED IK LI++ R ++ LV+ Sbjct: 790 VLYLYRNQLQKYIEVFVQKVNAARLPIVVGALLDVDCSEDAIKQLIINTRGKFDIDELVE 849 Query: 361 ECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E EKRNRL+LL +LE + EG D HNA+ K+ Sbjct: 850 EVEKRNRLKLLNHWLESKIQEGATDAATHNAMAKI 884
>CLH_SCHPO (Q10161) Probable clathrin heavy chain| Length = 1666 Score = 163 bits (413), Expect = 2e-40 Identities = 78/154 (50%), Positives = 109/154 (70%) Frame = +1 Query: 4 FKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLT 183 +KYI++A Q EVER+ R++N Y+ EK KN L EAKL D PLI VCDR+ FV DL Sbjct: 726 YKYIQAACLMNQFTEVERICRDNNVYNPEKVKNLLKEAKLADQLPLILVCDRYDFVNDLV 785 Query: 184 HYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDE 363 YL+ NNM ++IE YVQ++NP P VVG LLD +C E+ ++ L++SV +PV+ LV+E Sbjct: 786 FYLFRNNMFQFIEIYVQRINPSKTPQVVGALLDIDCDEELVQNLLMSVVGQVPVDELVEE 845 Query: 364 CEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 E+RNRL+LL +LE L+ G+QD +++AL K+ Sbjct: 846 VERRNRLKLLLPYLESLLQSGSQDRAIYDALAKI 879
>CLH_YEAST (P22137) Clathrin heavy chain| Length = 1653 Score = 158 bits (399), Expect = 7e-39 Identities = 77/154 (50%), Positives = 106/154 (68%) Frame = +1 Query: 4 FKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLT 183 +KYIE+AA+ Q +E+ER+ +++N YD E+ KNFL +A L D PL+ VCDRF FV ++ Sbjct: 735 YKYIEAAAKMKQYREIERIVKDNNVYDPERVKNFLKDANLEDQLPLVIVCDRFDFVHEMI 794 Query: 184 HYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDE 363 YLY + L++IE YVQ+VNP VVG LLD +C E FI+ L+ SV +P+ L E Sbjct: 795 LYLYKSQNLKFIETYVQQVNPSKTAQVVGALLDMDCDEAFIQSLLQSVLGQVPINELTTE 854 Query: 364 CEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 EKRNRL++L FLE +S+G QD V+NAL K+ Sbjct: 855 VEKRNRLKILLPFLEQSLSQGIQDQAVYNALAKI 888
>VG10_BPMD2 (O64203) Gene 10 protein (Gp10)| Length = 493 Score = 35.0 bits (79), Expect = 0.095 Identities = 13/40 (32%), Positives = 25/40 (62%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAK 120 H +Y+E +AR G ++E+ERV R + +++ F+ A+ Sbjct: 430 HARYVEESARAGDLRELERVVRAAKGLGRDRSPEFIARAR 469
>PEPCK_ARATH (Q9T074) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 671 Score = 33.5 bits (75), Expect = 0.28 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 13/73 (17%) Frame = +1 Query: 61 TRESNFYDAEKTKN--------FLMEAKLPDARP-----LINVCDRFGFVPDLTHYLYTN 201 TRE ++ D T+N F+ AK+P P ++ CD FG +P ++ Sbjct: 440 TREVDYSDKSVTENTRAAYPIEFIPNAKIPCVGPHPTNVILLACDAFGVLPPVSKLNLAQ 499 Query: 202 NMLRYIEGYVQKV 240 M +I GY V Sbjct: 500 TMYHFISGYTALV 512
>CLPX_DESVH (Q72CE7) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 417 Score = 32.7 bits (73), Expect = 0.47 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = +1 Query: 223 GYVQKV-NPGNAPLVVGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLT 396 G+ KV N + PL G+LLD P D +K GLI +PV VDE + + +R+LT Sbjct: 266 GFGAKVSNRKDRPL--GELLDQVHPNDLVKFGLIPEFIGRIPVVTHVDELGEEDLIRILT 323 Query: 397 QFLEHLVSE 423 + LV + Sbjct: 324 EPKNALVRQ 332
>PEPCK_MAIZE (Q9SLZ0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 666 Score = 32.7 bits (73), Expect = 0.47 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 13/73 (17%) Frame = +1 Query: 61 TRESNFYDAEKTKN--------FLMEAKLPDARP-----LINVCDRFGFVPDLTHYLYTN 201 TRE ++ D T+N ++ AK+P P ++ CD FG +P ++ + Sbjct: 435 TREVDYADYSVTENTRAAYPIEYIPIAKIPCVGPHPKNVILLACDAFGVLPPVSKLILAQ 494 Query: 202 NMLRYIEGYVQKV 240 M +I GY V Sbjct: 495 TMYHFISGYTALV 507
>CLPX_BORPA (Q7W8X1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 434 Score = 32.3 bits (72), Expect = 0.62 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +1 Query: 265 VGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSE 423 VG+L + PED IK GLI + LPV +DE ++ +++LT+ LV + Sbjct: 282 VGELFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNALVKQ 335
>CLPX_BORBR (Q7WK82) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 434 Score = 32.3 bits (72), Expect = 0.62 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +1 Query: 265 VGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSE 423 VG+L + PED IK GLI + LPV +DE ++ +++LT+ LV + Sbjct: 282 VGELFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNALVKQ 335
>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent| alpha-latrotoxin receptor 3) (Lectomedin-3) Length = 1447 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 192 VHKQYAPIHRRLCTEGKPWKCSVGSGAVT**RVPGRFH*G 311 V K+Y R C GK + S+GSG + R PGR+ G Sbjct: 1108 VRKEYGKCLRTHCCSGKSTESSIGSGKTSGSRTPGRYSTG 1147
>LPHN3_MOUSE (Q80TS3) Latrophilin-3 (Lectomedin-3) (Fragment)| Length = 1189 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 192 VHKQYAPIHRRLCTEGKPWKCSVGSGAVT**RVPGRFH*G 311 V K+Y R C GK + S+GSG + R PGR+ G Sbjct: 850 VRKEYGKCLRTHCCSGKSTESSIGSGKTSGSRTPGRYSTG 889
>PPCK_NEUCR (Q7RVS9) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)| Length = 561 Score = 32.0 bits (71), Expect = 0.80 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 17/93 (18%) Frame = +1 Query: 13 IESAARTGQIKE---VERVTRESNFYDAEKTKN--------FLMEAKLPDARP------L 141 I +A R G + E TRE ++ DA T+N ++ AK+P P + Sbjct: 315 IFNAIRYGSVLENVVFNPETREVDYGDATLTENTRCAYPIEYIPNAKIPCLSPNHPKNII 374 Query: 142 INVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKV 240 + CD G +P ++ M +I GY K+ Sbjct: 375 LLTCDARGVLPPISKLDSAQTMFHFISGYTSKM 407
>CLPX_BORPE (Q7VXI6) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 434 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +1 Query: 265 VGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSE 423 VG+L + PED IK GLI + LPV +DE ++ +++LT+ LV + Sbjct: 282 VGELFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAVLVQILTEPKNALVKQ 335
>EME1_SCHPO (Q9C103) Crossover junction endonuclease eme1 (EC 3.1.22.-)| (Essential meiotic endonuclease 1) Length = 738 Score = 32.0 bits (71), Expect = 0.80 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 1 HFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLIN-VCDRFGFVPD 177 HF + A T +I V+ R E + NF++ L + N +CD+F +P Sbjct: 636 HFSKFSARASTTEIGHVKSADR------IENSLNFMLRQILRVTPNIANAICDQFDSIPS 689 Query: 178 LTHYLYTN 201 L H+L T+ Sbjct: 690 LIHHLKTH 697
>PEPC2_UROPA (Q9XFA2) Phosphoenolpyruvate carboxykinase [ATP] 2 (EC 4.1.1.49)| Length = 626 Score = 31.6 bits (70), Expect = 1.0 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 13/69 (18%) Frame = +1 Query: 61 TRESNFYDAEKTKN--------FLMEAKLPDARP-----LINVCDRFGFVPDLTHYLYTN 201 TRE ++ D T+N F+ AK+P P ++ CD +G +P ++ Sbjct: 395 TREVDYADKSITENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQ 454 Query: 202 NMLRYIEGY 228 M +I GY Sbjct: 455 TMYHFISGY 463
>PEPC1_UROPA (P49292) Phosphoenolpyruvate carboxykinase [ATP] 1 (EC 4.1.1.49)| Length = 624 Score = 31.6 bits (70), Expect = 1.0 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 13/69 (18%) Frame = +1 Query: 61 TRESNFYDAEKTKN--------FLMEAKLPDARP-----LINVCDRFGFVPDLTHYLYTN 201 TRE ++ D T+N F+ AK+P P ++ CD +G +P ++ Sbjct: 393 TREVDYADKSITENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQ 452 Query: 202 NMLRYIEGY 228 M +I GY Sbjct: 453 TMYHFISGY 461
>CLPX_XYLFT (Q87E50) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 426 Score = 31.6 bits (70), Expect = 1.0 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = +1 Query: 223 GYVQKVNPGNAPLVVGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQ 399 G+ KV + VG++L PED IK GLI LPV +DE ++ +++LT+ Sbjct: 271 GFGVKVKSSESKRDVGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTE 330
>CLPX_XYLFA (Q9PE40) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 426 Score = 31.6 bits (70), Expect = 1.0 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = +1 Query: 223 GYVQKVNPGNAPLVVGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQ 399 G+ KV + VG++L PED IK GLI LPV +DE ++ +++LT+ Sbjct: 271 GFGVKVKSSESKRDVGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTE 330
>LPHN3_BOVIN (O97827) Latrophilin-3 precursor| Length = 1580 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 192 VHKQYAPIHRRLCTEGKPWKCSVGSGAVT**RVPGRFH*G 311 V K+Y R C G+ + S+GSG + R PGR+ G Sbjct: 1198 VRKEYGKCLRTHCCSGRSTESSIGSGKTSGSRTPGRYSTG 1237
>APOB_HUMAN (P04114) Apolipoprotein B-100 precursor (Apo B-100) [Contains:| Apolipoprotein B-48 (Apo B-48)] Length = 4563 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 3/104 (2%) Frame = +1 Query: 163 GFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVV---GQLLDDECPEDFIKGLILSVRS 333 GF PD N L ++ G +V G + ++V G DD+ +D + G++LSV Sbjct: 709 GFFPDSV-----NKALYWVNG---QVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEK 760 Query: 334 LLPVEPLVDECEKRNRLRLLTQFLEHLVSEGTQDVHVHNALGKL 465 L+ + E R LR+L + L G +H LGKL Sbjct: 761 LIKDLKSKEVPEARAYLRILGEEL------GFASLHDLQLLGKL 798
>FLIG_CAUCR (Q04955) Flagellar motor switch protein fliG| Length = 340 Score = 31.2 bits (69), Expect = 1.4 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 4/149 (2%) Frame = +1 Query: 7 KYIESAARTGQIKEVERVTRE--SNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPD- 177 +++ + TG I T+ ++F +K + E + P R + D+ G V + Sbjct: 66 EFVSGMSSTGAIMGSYEQTQRLLASFMPQDKVDALMEEIRGPAGRTM---WDKLGNVNEA 122 Query: 178 -LTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPL 354 L +YL N + + + KV +A V+ L PEDF + V +L +EP+ Sbjct: 123 VLANYL-KNEYPQTVAVVLSKVKSDHAARVLACL-----PEDFA---LECVTRMLRMEPV 173 Query: 355 VDECEKRNRLRLLTQFLEHLVSEGTQDVH 441 E + + L T+F+ +L +D H Sbjct: 174 QREILDKIEMTLRTEFMSNLARTSKRDSH 202
>PEPCK_CUCSA (P42066) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 670 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 13/73 (17%) Frame = +1 Query: 61 TRESNFYDAEKTKN--------FLMEAKLPDARP-----LINVCDRFGFVPDLTHYLYTN 201 TRE ++ + T+N ++ AK+P P ++ CD FG +P ++ Sbjct: 439 TREVDYSEKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLSLPQ 498 Query: 202 NMLRYIEGYVQKV 240 M +I GY V Sbjct: 499 TMYHFISGYTALV 511
>ZN624_HUMAN (Q9P2J8) Zinc finger protein 624| Length = 739 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +3 Query: 96 KELSDGSKTT*CPSTHKCLRPLWLCSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 K SD SK TH +P + C +K Y +H++ TE KP++C+ Sbjct: 269 KAFSDKSKLARHQETHNGEKP-YKCDDCGKAFRNKSYLSVHQKTHTEEKPYQCN 321
>ZN600_HUMAN (Q6ZNG1) Zinc finger protein 600| Length = 722 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +3 Query: 168 CSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 C L HKQY HRR T KP+KC+ Sbjct: 192 CDVCGKLFNHKQYLTCHRRCHTGEKPYKCN 221
>PPCK_EMENI (Q96UL8) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)| Length = 556 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 17/93 (18%) Frame = +1 Query: 13 IESAARTGQIKE---VERVTRESNFYDAEKTKN--------FLMEAKLP---DARP---L 141 I +A R G + E + ++R ++ D+ T+N ++ AK+P D+ P + Sbjct: 310 IFNAIRFGSVLENVVFDPISRVVDYDDSTLTENTRCAYPIEYIENAKVPCLSDSHPSNII 369 Query: 142 INVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKV 240 + CD G +P ++ M +I GY K+ Sbjct: 370 LLTCDARGVLPPISKLTTEQTMFHFISGYTSKM 402
>KR18_HUMAN (Q9HCG1) Zinc finger protein Kr18 (HKr18)| Length = 818 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = +3 Query: 96 KELSDGSKTT*CPSTHKCLRPLWLCSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 + SD S T + H +P + C + H Y HRR+ T KP+KC+ Sbjct: 600 RAFSDRSSLTFHQAIHTGEKP-YKCHECGKVFRHNSYLATHRRIHTGEKPYKCN 652
>TAL1_HUMAN (P17542) T-cell acute lymphocytic leukemia-1 protein (TAL-1| protein) (Stem cell protein) (T-cell leukemia/lymphoma-5 protein) Length = 331 Score = 29.3 bits (64), Expect = 5.2 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 11/112 (9%) Frame = +1 Query: 130 ARPLINVCDRFGFVPDLTHYLYTNNML-RYIEGYVQKVNPGNAPLVVGQLLD---DECPE 297 ++PL ++ F PD TNN + R Y ++ G VV ++ + + Sbjct: 141 SQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQ 200 Query: 298 DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLV-------SEGTQ 432 + G +R L+P P + K LRL +++ L EGTQ Sbjct: 201 QNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGTQ 252
>ZNF21_MOUSE (Q6P560) Zinc finger protein 21| Length = 627 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 168 CSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 C +++S K Y IH+R TE KP+KC+ Sbjct: 492 CEKAFS---QKSYLIIHQRTHTEEKPYKCN 518
>ZN578_HUMAN (Q96N58) Zinc finger protein 578| Length = 365 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 168 CSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 C+ + H+ P HRRL + KP+KC+ Sbjct: 260 CNECHKTFSHRSSLPCHRRLHSGEKPYKCN 289
>ENGB_STAAR (Q6GG32) Probable GTP-binding protein engB| Length = 196 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 235 KVNPGNAPLVVGQLLDDECPEDFIKGLILSVRS 333 KVNP N L++ + +D+ PE + + LS RS Sbjct: 2 KVNPNNIELIISAVKEDQYPETELSEVALSGRS 34
>ZNF21_HUMAN (P17025) Zinc finger protein 21 (Zinc finger protein KOX14)| Length = 639 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 168 CSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 C +++S K Y IH+R TE KP+KC+ Sbjct: 491 CEKAFS---QKSYLIIHQRTHTEEKPYKCN 517
>RPOC_THIDA (Q3SLQ5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1398 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/44 (45%), Positives = 24/44 (54%) Frame = +1 Query: 157 RFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDE 288 R G V D+T L + Y EG+V V PG PL GQLL +E Sbjct: 123 RLGMVLDMT--LRDIERVLYFEGFVV-VEPGMTPLNRGQLLTEE 163
>ZNF21_PONPY (Q5R9S5) Zinc finger protein 21| Length = 620 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 168 CSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 C +++S K Y IH+R TE KP+KC+ Sbjct: 472 CEKAFS---QKSYLIIHQRTHTEEKPYKCN 498
>KRUH_DROME (P08155) Krueppel homologous protein 1| Length = 845 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +3 Query: 138 THKCLRPLWLCSRSYSLSVHKQYAPIHRRLCTEGKPWKCSV 260 TH RP + C + L K+ +HRR+ T+ +P+KC V Sbjct: 292 THTGERP-FECEFCHKLFSVKENLQVHRRIHTKERPYKCDV 331
>ZO28_XENLA (P18747) Oocyte zinc finger protein XLCOF28 (Fragment)| Length = 439 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = +3 Query: 93 DKELSDGSKTT*CPSTHKCLRPLWLCSRSYSLSVHKQYAPIHRRLCTEGKPWKCSV 260 DK S S TH RP S S H + +H R T KP+KCS+ Sbjct: 180 DKSFSQQSTLVVHQRTHTGERPFQCSHCEKSFSYHYAFV-VHERTHTGEKPYKCSM 234
>ZN577_HUMAN (Q9BSK1) Zinc finger protein 577| Length = 478 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 165 LCSRSYSLSVHKQYAPIHRRLCTEGKPWKCS 257 +C +++S K Y H+RL T KP+KCS Sbjct: 267 VCGKAFS---QKAYLTAHQRLHTGDKPYKCS 294
>ZN483_HUMAN (Q8TF39) Zinc finger protein 483| Length = 744 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 96 KELSDGSKTT*CPSTHKCLRPLWL--CSRSYSLSVHKQYAPIHRRLCTEGKPWKC 254 K SD S T TH +P C + ++LS H H+R+ T KP+KC Sbjct: 474 KAFSDSSSLTPHHRTHSGEKPFKCDDCGKGFTLSAHLIK---HQRIHTGEKPYKC 525
>ZN12_MICSA (P38621) Zinc finger protein ZFMSA12A| Length = 415 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = +3 Query: 138 THKCLRPLWLCSRSYSLSVHKQYAPIHRRLCTEGKPWKCSV 260 TH +P +LCS + IHRR T KP+KCSV Sbjct: 294 THTGEKP-YLCSDCGKAFISAGELQIHRRTHTGEKPYKCSV 333
>TCF15_CHICK (P79782) Transcription factor 15 (bHLH-EC2 protein) (Paraxis)| Length = 183 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Frame = +1 Query: 322 SVRSLLPVEPLVDECEKRNRLRLLTQFLEH-----LVSEGTQD 435 ++R+L+P EP+ + K LRL + ++ H L+ EG +D Sbjct: 83 ALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGEGCED 125
>SRGP2_MOUSE (Q812A2) SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3)| (srGAP2) (WAVE-associated Rac GTPase-activating protein) (WRP) (Rho-GTPase-activating protein 14) Length = 1099 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = -1 Query: 372 LLAFINQW---LDRKKRSNRQNQTLNEIFRALVIK*LPHYQRSISRVYLLYIAFDVSEHI 202 LL+ +N W L + +R +R + TLN+IF VI L + R++ + H Sbjct: 92 LLSPVNCWYLVLHQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHE 151 Query: 201 VCVQIVSKIWNKAK 160 +++ ++++ K Sbjct: 152 ELLKVTNELYTVMK 165
>SRGP2_HUMAN (O43295) SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3)| (srGAP2) (WAVE-associated Rac GTPase-activating protein) (WRP) (Mental disorder-associated GAP) (Rho-GTPase-activating protein 14) Length = 1099 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = -1 Query: 372 LLAFINQW---LDRKKRSNRQNQTLNEIFRALVIK*LPHYQRSISRVYLLYIAFDVSEHI 202 LL+ +N W L + +R +R + TLN+IF VI L + R++ + H Sbjct: 92 LLSPVNCWYLVLHQTRRESRDHATLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQMHE 151 Query: 201 VCVQIVSKIWNKAK 160 +++ ++++ K Sbjct: 152 ELLKVTNELYTVMK 165
>CLPX2_METCA (Q60BE7) ATP-dependent Clp protease ATP-binding subunit clpX 2| Length = 428 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = +1 Query: 223 GYVQKVNPGNAPLVVGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQ 399 G+ V + VG++L D ED I+ GLI LPV ++E ++ +R+LT+ Sbjct: 272 GFAADVKSKDDSRNVGEVLADVEAEDLIRYGLIPEFVGRLPVVATLEELDEAALVRILTE 331 Query: 400 FLEHLVSE 423 LV + Sbjct: 332 PKNALVKQ 339
>ZN228_HUMAN (Q9UJU3) Zinc finger protein 228| Length = 913 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 165 LCSRSYSLSVHKQYAPIHRRLCTEGKPWKCSV 260 +C + +S S + HRR+ T GKP+KC V Sbjct: 753 MCGKGFSQSSRLE---AHRRVHTGGKPYKCEV 781
>CLPX_VIBPA (Q87R79) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 426 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 223 GYVQKVNPGNAPLVVGQLLDDECPEDFIK-GLILSVRSLLPVEPLVDECEKRNRLRLLTQ 399 G+ +V N VG+L PED +K GLI LPV + E ++ +++L + Sbjct: 271 GFGAEVRSKNETKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCE 330 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,989,829 Number of Sequences: 219361 Number of extensions: 1364719 Number of successful extensions: 5268 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4361 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5258 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
