>gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete sequence
          Length = 167771

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 180   atgcctccccctcatcacatgtcttg 205
             ||||||||||||||||||| ||||||
Sbjct: 42341 atgcctccccctcatcacaagtcttg 42316

>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 433   ttggggctgttgatgtgcatgacacna-catggggttcaaacccc 476
             |||||| ||||| || ||||||||| | |||||||||||||||||
Sbjct: 72149 ttggggttgttggtgggcatgacacaaacatggggttcaaacccc 72193



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 433   ttggggctgttgatgtgcatgacacna-catggggttcaaacccc 476
             |||||| ||||| || ||||||||| | |||||||||||||||||
Sbjct: 61345 ttggggttgttggtgggcatgacacaaacatggggttcaaacccc 61389

>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                  
Query: 441   gttgatgtgcatgacac-nacatggggttcaaacccc 476
             |||||||||||||||||  ||||||||||||| ||||
Sbjct: 22708 gttgatgtgcatgacacaaacatggggttcaagcccc 22744

>gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosome 14, complete
             sequence
          Length = 197419

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   caccatcacatgcccatatgt 350
             |||||||||||||||||||||
Sbjct: 13916 caccatcacatgcccatatgt 13896

>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence
          Length = 202929

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    caccatcacatgcccatatgt 350
              |||||||||||||||||||||
Sbjct: 152297 caccatcacatgcccatatgt 152277

>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains
            the gene for reversion induced LIM protein (Ril), the
            Slc22a4 and Slc22a9 genes for solute carrier family 22
            (organic cation transporter), members 4 and 9, a
            Sin3-associated polypeptide 18 (Sap18) pseudogene, a
            pseudogene similar to part of solute carrier family 22
            (organic cation transporter), member 4 Slc22a4 and two
            CpG islands, complete sequence
          Length = 171301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 331  accatcacatgcccatatgtg 351
            |||||||||||||||||||||
Sbjct: 7382 accatcacatgcccatatgtg 7362

>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence
          Length = 189760

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    ttgttagtttaaagatctct 389
              ||||||||||||||||||||
Sbjct: 182843 ttgttagtttaaagatctct 182824

>gb|AC156576.3| Mus musculus BAC clone RP23-7C22 from chromosome 13, complete sequence
          Length = 205345

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   tttaaagatctcttatgtgt 396
             ||||||||||||||||||||
Sbjct: 34569 tttaaagatctcttatgtgt 34550

>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete
              sequence
          Length = 196474

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    agcttgtgaactttagtgtg 127
              ||||||||||||||||||||
Sbjct: 123797 agcttgtgaactttagtgtg 123778

>gb|AC124676.7| Mus musculus chromosome 6, clone RP24-93M1, complete sequence
          Length = 212789

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    agcttgtgaactttagtgtg 127
              ||||||||||||||||||||
Sbjct: 165979 agcttgtgaactttagtgtg 165998

>gb|AC159209.2| Mus musculus BAC clone RP23-100C6 from chromosome 13, complete sequence
          Length = 212761

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    cagtggggtgtggatgcctc 186
              ||||||||||||||||||||
Sbjct: 154292 cagtggggtgtggatgcctc 154273

>gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosome 8, complete sequence
          Length = 177226

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ttgtgctttgaggtgataag 79
             ||||||||||||||||||||
Sbjct: 27080 ttgtgctttgaggtgataag 27099

>gb|AC141476.3| Mus musculus BAC clone RP24-170D4 from chromosome 13, complete sequence
          Length = 146228

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   cagtggggtgtggatgcctc 186
             ||||||||||||||||||||
Sbjct: 60279 cagtggggtgtggatgcctc 60260

>ref|XM_860799.1| PREDICTED: Canis familiaris similar to Putative RNA-binding protein
            15 (RNA binding motif protein 15) (One-twenty two
            protein), transcript variant 2 (LOC479909), mRNA
          Length = 4560

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    gagaagtggagctaaccttgttaa 24
            ||||||||||||| ||||||||||
Sbjct: 2983 gagaagtggagctgaccttgttaa 3006

>gb|AC101142.9| Mus musculus chromosome 13, clone RP23-170P21, complete sequence
          Length = 176563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   tttaaagatctcttatgtgt 396
             ||||||||||||||||||||
Sbjct: 24707 tttaaagatctcttatgtgt 24726

>gb|AC162940.4| Mus musculus BAC clone RP23-95D3 from chromosome 13, complete sequence
          Length = 218228

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    cagtggggtgtggatgcctc 186
              ||||||||||||||||||||
Sbjct: 187865 cagtggggtgtggatgcctc 187884

>emb|AL669823.7| Mouse DNA sequence from clone RP23-456O1 on chromosome 11 Contains a
             novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 197012

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   gtttaaagatctcttatgtg 395
             ||||||||||||||||||||
Sbjct: 51217 gtttaaagatctcttatgtg 51198

>gb|AC099055.2| Homo sapiens chromosome 3 clone RP11-527L9, complete sequence
          Length = 155962

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    tttaaagatctcttatgtgt 396
              ||||||||||||||||||||
Sbjct: 148746 tttaaagatctcttatgtgt 148765

>gb|AC154596.2| Mus musculus BAC clone RP23-354C17 from chromosome 17, complete
             sequence
          Length = 208266

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    ttggtgtgggttgtgctttgaggt 73
             |||||| |||||||||||||||||
Sbjct: 37499 ttggtgggggttgtgctttgaggt 37476

>emb|BX571820.5| Zebrafish DNA sequence from clone DKEY-14G9 in linkage group 19,
             complete sequence
          Length = 148354

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   atactctcttgttagtttaa 381
             ||||||||||||||||||||
Sbjct: 53976 atactctcttgttagtttaa 53995

>emb|AL590988.11| Mouse DNA sequence from clone RP23-46C18 on chromosome 8, complete
              sequence
          Length = 183975

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ttgtgctttgaggtgataag 79
              ||||||||||||||||||||
Sbjct: 136492 ttgtgctttgaggtgataag 136511

>emb|CT030654.8| Mouse DNA sequence from clone RP23-332G16 on chromosome 17, complete
              sequence
          Length = 194694

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     ttggtgtgggttgtgctttgaggt 73
              |||||| |||||||||||||||||
Sbjct: 193649 ttggtgggggttgtgctttgaggt 193626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,913,846
Number of Sequences: 3902068
Number of extensions: 3913846
Number of successful extensions: 75499
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 75451
Number of HSP's gapped (non-prelim): 49
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)