ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30f01 |
|---|---|
| Clone Library Name | barley_pub |
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 38.5 bits (88), Expect = 0.004 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = +3 Query: 159 CAVGAYADALPEPVNEEVLGLVVFRSALTDPSGALAAWAES-DATPCGWPHVECDPATSR 335 C Y +L +N++ L + L+DP+ +L++W+++ D TPC W V CD ATS Sbjct: 10 CLSSTYLPSLS--LNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCD-ATSN 66 Query: 336 VL 341 V+ Sbjct: 67 VV 68
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 36.2 bits (82), Expect = 0.020 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 201 NEEVLGLVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATS 332 N E L +++L DP+ L +W + TPC W HV C+ S Sbjct: 26 NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNS 69
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 34.7 bits (78), Expect = 0.057 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 249 PSGALAAWAESDATPCGWPHVECD 320 PS +W SD+TPC W VECD Sbjct: 42 PSDITQSWNASDSTPCSWLGVECD 65
>ULAD_SHIDS (Q328K1) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 30.8 bits (68), Expect = 0.83 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WGG+ + A+ SDMG + Sbjct: 141 AQAAGVAWGGADITAIKRLSDMGFKV 166
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 219 LVVFRSALTDPS-GALAAWAESDATPCGWPHVECDPATSRV 338 L F+S+L++P+ G W+E+ W + CDP + RV Sbjct: 35 LNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRV 75
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +3 Query: 219 LVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATSRV 338 L+ + A DP LA+W +SD C W V CD T+R+ Sbjct: 35 LLQIKKAFGDPY-VLASW-KSDTDCCDWYCVTCDSTTNRI 72
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 219 LVVFRSALTDPSGALAAWAESDATPCGWPHVECDPA 326 L+ + +L +P+ L+ W+ + A C W HV CD A Sbjct: 35 LMRVKQSLGNPA-TLSTWSLASADCCEWDHVRCDEA 69
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/61 (24%), Positives = 22/61 (36%) Frame = -1 Query: 325 AGSHSTCGQPHGVASDSAHAASAPEGSVRAERNXXXXXXXXXXXXXXXXAYAPTAQEDTR 146 AG+ ST P +S S + + GS++ E +P E TR Sbjct: 172 AGASSTATCPASSSSSSGNGSGGKSGSIKQEHTEIHSSSSAISAAAASTVMSPPPAEATR 231 Query: 145 S 143 S Sbjct: 232 S 232
>KLDC5_HUMAN (Q9P2K6) Kelch domain-containing protein 5| Length = 505 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -3 Query: 296 ARRGVRLGPRGERAGGV 246 AR G LGPRGE+ GGV Sbjct: 74 AREGWLLGPRGEKGGGV 90
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +3 Query: 207 EVLGLVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATSRVLRL 347 ++ ++ + +L PS ++ SD PC W H+ C T RV R+ Sbjct: 28 DLSAMLSLKKSLNPPS----SFGWSDPDPCKWTHIVC-TGTKRVTRI 69
>OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic anion| transporter 4) Length = 550 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%) Frame = +3 Query: 240 LTDPSGALAAWAESDATPC--GW 302 L DP+ +W+E+D PC GW Sbjct: 95 LLDPNATATSWSEADTEPCVDGW 117
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 198 VNEEVLGLVVFRSALTDPSGALAAW-AESDATPCGWPHVEC 317 ++ E L+ F+ +L +PS L++W S A+ C W V C Sbjct: 23 LSSETTSLISFKRSLENPS-LLSSWNVSSSASHCDWVGVTC 62
>ULAD_SHISS (Q3YUF2) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_SHIFL (Q83P27) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_SHIBS (Q31TC7) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_SALTY (Q8ZK87) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_SALTI (Q8Z169) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_SALPA (Q5PJ63) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_SALCH (Q57GJ6) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_ECOLI (P39304) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_ECOL6 (Q8FAI9) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>ULAD_ECO57 (Q8XDI7) 3-keto-L-gulonate-6-phosphate decarboxylase ulaD (EC| 4.1.1.85) (3-dehydro-L-gulonate-6-phosphate decarboxylase) (KGPDC) (L-ascorbate utilization protein D) Length = 216 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 105 ANAAGVGWGGSGMMAMVEWSDMGVAI 28 A AAGV WG + + A+ SDMG + Sbjct: 141 AQAAGVAWGEADITAIKRLSDMGFKV 166
>YMFC_BACSU (O31761) Hypothetical transcriptional regulator ymfC| Length = 241 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 5/35 (14%) Frame = +3 Query: 252 SGALAAWAESDATPCGW-----PHVECDPATSRVL 341 SG++ ++A +D P G+ P +ECDP T+ +L Sbjct: 173 SGSVISYAVTDIEPIGYHDTISPVLECDPETALLL 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,657,295 Number of Sequences: 219361 Number of extensions: 413092 Number of successful extensions: 1483 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1465 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1482 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
