ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl31c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017414.1| Zea mays clone EL01N0331F10.c mRNA sequence 44 0.36
2ref|NM_188290.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
3ref|XM_507851.1| PREDICTED: Pan troglodytes N-deacetylase/N-sulf... 42 1.4
4gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
5gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
6ref|NM_003635.2| Homo sapiens N-deacetylase/N-sulfotransferase (... 42 1.4
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
8ref|XM_546167.2| PREDICTED: Canis familiaris similar to Heparin ... 42 1.4
9gb|BC052780.1| Homo sapiens N-deacetylase/N-sulfotransferase (he... 42 1.4
10emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 42 1.4
11gb|BC035711.1| Homo sapiens N-deacetylase/N-sulfotransferase (he... 42 1.4
12gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.4
13gb|AC022400.9| Homo sapiens chromosome 10 clone RP11-574K11, com... 42 1.4
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 42 1.4
18dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19gb|AY893040.1| Synthetic construct Homo sapiens clone FLH140244.... 42 1.4
20gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
21gb|U36601.1|HSU36601 Homo sapiens heparan N-deacetylase/N-sulfot... 42 1.4
22gb|AF042084.1|AF042084 Homo sapiens heparan glucosaminyl N-deace... 42 1.4
23gb|BC110588.1| Homo sapiens N-deacetylase/N-sulfotransferase (he... 42 1.4
24gb|BC110589.1| Homo sapiens N-deacetylase/N-sulfotransferase (he... 42 1.4
25dbj|AB208870.1| Homo sapiens mRNA for N-deacetylase/N-sulfotrans... 42 1.4
26ref|XM_482025.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
27ref|XM_473980.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
28ref|XM_466699.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
29gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.7
30ref|NM_185924.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
31ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
32gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
33gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
34gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
35gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.7
36ref|XM_384245.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 5.7
37emb|AL359699.12| Human DNA sequence from clone RP11-130F5 on chr... 40 5.7
38emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
39gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom... 40 5.7
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
46dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
47dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
48dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
49dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
50emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 ... 40 5.7
51dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
52dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
53dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
54dbj|AK111216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
55dbj|AK071478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
56dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
57dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
58gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.7
59emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
60emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chro... 40 5.7
61gb|AY048670.1| Streptomyces globisporus enediyne antitumor antib... 40 5.7 
>gb|BT017414.1| Zea mays clone EL01N0331F10.c mRNA sequence
          Length = 1298

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 224 cggccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||||
Sbjct: 788 cggccgtcgccgtcggcggcgg 809
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>ref|NM_188290.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 225 ggccgtcgccgtcggcggcgg 245
           |||||||||||||||||||||
Sbjct: 125 ggccgtcgccgtcggcggcgg 145
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>ref|XM_507851.1| PREDICTED: Pan troglodytes N-deacetylase/N-sulfotransferase
           (heparan glucosaminyl) 2 (LOC450528), mRNA
          Length = 1903

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 652 ctaggcggctggggcgtgtga 632
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>gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035N09,
              complete sequence
          Length = 129468

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    cgagcgagcgagcacgcgcgc 185
              |||||||||||||||||||||
Sbjct: 116193 cgagcgagcgagcacgcgcgc 116213
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>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03
             map S20262S, complete sequence
          Length = 149553

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   cgagcgagcgagcacgcgcgc 185
             |||||||||||||||||||||
Sbjct: 13735 cgagcgagcgagcacgcgcgc 13755
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>ref|NM_003635.2| Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
            2 (NDST2), mRNA
          Length = 3778

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  ctaggcggctggggcgtgtga 394
            |||||||||||||||||||||
Sbjct: 1209 ctaggcggctggggcgtgtga 1189
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 224     cggccgtcgccgtcggcggcggatc 248
               ||||||||| |||||||||||||||
Sbjct: 7675960 cggccgtcgtcgtcggcggcggatc 7675936
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>ref|XM_546167.2| PREDICTED: Canis familiaris similar to Heparin sulfate
           N-deacetylase/N-sulfotransferase (N-HSST) (N-heparin
           sulfate sulfotransferase) (Glucosaminyl
           N-deacetylase/N-sulfotransferase), transcript variant 1
           (LOC489049), mRNA
          Length = 3172

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 669 ctaggcggctggggcgtgtga 649
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>gb|BC052780.1| Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
            2, mRNA (cDNA clone IMAGE:5266357), containing
            frame-shift errors
          Length = 5831

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  ctaggcggctggggcgtgtga 394
            |||||||||||||||||||||
Sbjct: 1275 ctaggcggctggggcgtgtga 1255
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>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 165    cgagcgagcgagcacgcgcgc 185
              |||||||||||||||||||||
Sbjct: 132543 cgagcgagcgagcacgcgcgc 132523
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>gb|BC035711.1| Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
            2, mRNA (cDNA clone MGC:46209 IMAGE:5587622), complete
            cds
          Length = 3778

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  ctaggcggctggggcgtgtga 394
            |||||||||||||||||||||
Sbjct: 1209 ctaggcggctggggcgtgtga 1189
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 224   cggccgtcgccgtcggcggcggatc 248
             ||||||||| |||||||||||||||
Sbjct: 39330 cggccgtcgtcgtcggcggcggatc 39354
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>gb|AC022400.9| Homo sapiens chromosome 10 clone RP11-574K11, complete sequence
          Length = 183797

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 374    ctaggcggctggggcgtgtga 394
              |||||||||||||||||||||
Sbjct: 140448 ctaggcggctggggcgtgtga 140468
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 165      cgagcgagcgagcacgcgcgc 185
                |||||||||||||||||||||
Sbjct: 13297382 cgagcgagcgagcacgcgcgc 13297402



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 165      cgagcgagcgagcacgcgcg 184
                ||||||||||||||||||||
Sbjct: 10896134 cgagcgagcgagcacgcgcg 10896115
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 224     cggccgtcgccgtcggcggcggatc 248
               ||||||||| |||||||||||||||
Sbjct: 7673795 cggccgtcgtcgtcggcggcggatc 7673771
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 225     ggccgtcgccgtcggcggcgg 245
               |||||||||||||||||||||
Sbjct: 5506756 ggccgtcgccgtcggcggcgg 5506776
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>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   cgagcgagcgagcacgcgcgc 185
             |||||||||||||||||||||
Sbjct: 38160 cgagcgagcgagcacgcgcgc 38140
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1015E06
          Length = 164583

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 225    ggccgtcgccgtcggcggcgg 245
              |||||||||||||||||||||
Sbjct: 103596 ggccgtcgccgtcggcggcgg 103616
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>gb|AY893040.1| Synthetic construct Homo sapiens clone FLH140244.01L
           N-deacetylase/N-sulfotransferase 2 (NDST2) mRNA, partial
           cds
          Length = 2652

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 652 ctaggcggctggggcgtgtga 632
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 165      cgagcgagcgagcacgcgcgc 185
                |||||||||||||||||||||
Sbjct: 13377561 cgagcgagcgagcacgcgcgc 13377581



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 165      cgagcgagcgagcacgcgcg 184
                ||||||||||||||||||||
Sbjct: 10975323 cgagcgagcgagcacgcgcg 10975304
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>gb|U36601.1|HSU36601 Homo sapiens heparan N-deacetylase/N-sulfotransferase-2 mRNA,
           complete cds
          Length = 3221

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 679 ctaggcggctggggcgtgtga 659
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>gb|AF042084.1|AF042084 Homo sapiens heparan glucosaminyl
           N-deacetylase/N-sulfotransferase-2 gene, complete cds
          Length = 6500

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 679 ctaggcggctggggcgtgtga 659
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>gb|BC110588.1| Homo sapiens N-deacetylase/N-sulfotransferase (heparan
           glucosaminyl) 2, mRNA (cDNA clone MGC:129697
           IMAGE:40011898), complete cds
          Length = 2954

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 688 ctaggcggctggggcgtgtga 668
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>gb|BC110589.1| Homo sapiens N-deacetylase/N-sulfotransferase (heparan
           glucosaminyl) 2, mRNA (cDNA clone MGC:129705
           IMAGE:40012703), complete cds
          Length = 2954

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 688 ctaggcggctggggcgtgtga 668
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>dbj|AB208870.1| Homo sapiens mRNA for N-deacetylase/N-sulfotransferase (heparan
           glucosaminyl) 2 variant protein
          Length = 4519

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 ctaggcggctggggcgtgtga 394
           |||||||||||||||||||||
Sbjct: 613 ctaggcggctggggcgtgtga 593
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>ref|XM_482025.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 342

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ggacggccgtcgccgtcggc 240
           ||||||||||||||||||||
Sbjct: 99  ggacggccgtcgccgtcggc 118
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>ref|XM_473980.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 93  gccgtcgccgtcggcggcgg 74
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>ref|XM_466699.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 624 gccgtcgccgtcggcggcgg 605
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     gccgtcgccgtcggcggcgg 245
               ||||||||||||||||||||
Sbjct: 3436237 gccgtcgccgtcggcggcgg 3436218
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>ref|NM_185924.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2634

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 157 gccgtcgccgtcggcggcgg 138
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>ref|XM_479146.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1816

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 113 gccgtcgccgtcggcggcgg 94
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>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 165   cgagcgagcgagcacgcgcgcccc 188
             |||||||||||||| |||||||||
Sbjct: 32116 cgagcgagcgagcaagcgcgcccc 32139
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>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11,
              complete sequence
          Length = 177574

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 165    cgagcgagcgagcacgcgcgcccc 188
              |||||||||||||| |||||||||
Sbjct: 166695 cgagcgagcgagcaagcgcgcccc 166718
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>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0045P14, complete sequence
          Length = 121894

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   cgagcgagcgagcacgcgcg 184
             ||||||||||||||||||||
Sbjct: 85654 cgagcgagcgagcacgcgcg 85635
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 265     gcgaggagcagcgccgggtgctgg 288
               ||||||||| ||||||||||||||
Sbjct: 1063557 gcgaggagctgcgccgggtgctgg 1063534
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>ref|XM_384245.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04069.1)
           partial mRNA
          Length = 3561

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  cctcctcgtcatcttcctcg 42
           ||||||||||||||||||||
Sbjct: 946 cctcctcgtcatcttcctcg 927
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>emb|AL359699.12| Human DNA sequence from clone RP11-130F5 on chromosome 1 Contains a
            SLAM family member 6 (SLAMF6) pseudogene, the gene for
            kinase interacting with leukemia-associated gene (KIS)
            and two CpG islands, complete sequence
          Length = 105902

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   cgcgcttctcccaccacacc 66
            ||||||||||||||||||||
Sbjct: 5501 cgcgcttctcccaccacacc 5482
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>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    gccgtcgccgtcggcggcgg 245
              ||||||||||||||||||||
Sbjct: 163086 gccgtcgccgtcggcggcgg 163067
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>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence
          Length = 222209

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     agcctccgcttcccctcctc 29
              ||||||||||||||||||||
Sbjct: 113955 agcctccgcttcccctcctc 113974
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 226      gccgtcgccgtcggcggcgg 245
                ||||||||||||||||||||
Sbjct: 31990220 gccgtcgccgtcggcggcgg 31990201
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 221      ggacggccgtcgccgtcggc 240
                ||||||||||||||||||||
Sbjct: 17265066 ggacggccgtcgccgtcggc 17265085
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      gccgtcgccgtcggcggcgg 245
                ||||||||||||||||||||
Sbjct: 27008548 gccgtcgccgtcggcggcgg 27008567



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 226      gccgtcgccgtcggcggcgg 245
                ||||||||||||||||||||
Sbjct: 25201597 gccgtcgccgtcggcggcgg 25201578
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     gccgtcgccgtcggcggcgg 245
               ||||||||||||||||||||
Sbjct: 5799586 gccgtcgccgtcggcggcgg 5799567
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 165      cgagcgagcgagcacgcgcgcccc 188
                |||||||||||||| |||||||||
Sbjct: 16080946 cgagcgagcgagcaagcgcgcccc 16080969
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      gccgtcgccgtcggcggcgg 245
                ||||||||||||||||||||
Sbjct: 24183360 gccgtcgccgtcggcggcgg 24183379
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>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1316_A04
          Length = 87144

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   gccgtcgccgtcggcggcgg 245
             ||||||||||||||||||||
Sbjct: 73026 gccgtcgccgtcggcggcgg 73045
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>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    gccgtcgccgtcggcggcgg 245
              ||||||||||||||||||||
Sbjct: 115115 gccgtcgccgtcggcggcgg 115096
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0537F07
          Length = 147724

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 361 gccgtcgccgtcggcggcgg 342
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   gccgtcgccgtcggcggcgg 245
             ||||||||||||||||||||
Sbjct: 18268 gccgtcgccgtcggcggcgg 18249
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>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12,
             complete sequence
          Length = 161610

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   tcgagcgagcgagcacgcgc 183
             ||||||||||||||||||||
Sbjct: 52350 tcgagcgagcgagcacgcgc 52331
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    gccgtcgccgtcggcggcgg 245
              ||||||||||||||||||||
Sbjct: 142101 gccgtcgccgtcggcggcgg 142120
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>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H03
          Length = 189893

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ggacggccgtcgccgtcggc 240
              ||||||||||||||||||||
Sbjct: 125691 ggacggccgtcgccgtcggc 125710
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>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0427D10
          Length = 154192

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   gccgtcgccgtcggcggcgg 245
             ||||||||||||||||||||
Sbjct: 11789 gccgtcgccgtcggcggcgg 11808
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>dbj|AK111216.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B05, full
           insert sequence
          Length = 2634

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 157 gccgtcgccgtcggcggcgg 138
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>dbj|AK071478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092B08, full
           insert sequence
          Length = 1717

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 231 gccgtcgccgtcggcggcgg 250
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>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full
           insert sequence
          Length = 1817

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gccgtcgccgtcggcggcgg 245
           ||||||||||||||||||||
Sbjct: 114 gccgtcgccgtcggcggcgg 95
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>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1003_H02
          Length = 124043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    gccgtcgccgtcggcggcgg 245
              ||||||||||||||||||||
Sbjct: 122084 gccgtcgccgtcggcggcgg 122065
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     gccgtcgccgtcggcggcgg 245
               ||||||||||||||||||||
Sbjct: 3684868 gccgtcgccgtcggcggcgg 3684887
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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   gccgtcgccgtcggcggcgg 245
             ||||||||||||||||||||
Sbjct: 10927 gccgtcgccgtcggcggcgg 10908
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>emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chromosome X, complete
             sequence
          Length = 227581

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   ccaccacctgtggatctcct 341
             ||||||||||||||||||||
Sbjct: 19160 ccaccacctgtggatctcct 19179
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>gb|AY048670.1| Streptomyces globisporus enediyne antitumor antibiotic C-1027
             biosynthetic gene cluster, complete sequence
          Length = 85163

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   catgaggcggcccaccacct 330
             ||||||||||||||||||||
Sbjct: 11480 catgaggcggcccaccacct 11499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,262,710
Number of Sequences: 3902068
Number of extensions: 3262710
Number of successful extensions: 62804
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61986
Number of HSP's gapped (non-prelim): 818
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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