>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 145/182 (79%)
 Strand = Plus / Minus

                                                                            
Query: 197      gtcgcgcccaaggtgttcggctcaatgacgcgccgggcagcggcctcacttaacaagtcg 256
                ||||||||| ||||||||| |  |||||||||||||| ||||||||| ||    | | ||
Sbjct: 22460850 gtcgcgccccaggtgttcgacggaatgacgcgccggggagcggcctccctcgggaggacg 22460791

                                                                            
Query: 257      ctcactgggttccttgcgcacgaagatccggagaagctcctgtcgctctttgcagccaag 316
                ||| | |||||||| ||||| |||||||| |  ||| |||| || || ||||| | ||||
Sbjct: 22460790 ctcgccgggttcctggcgcatgaagatccagccaaggtcctctccctatttgcggacaag 22460731

                                                                            
Query: 317      gtcaggcagtgcaggggccttggctctgttgacttcgcgtgcgccttgcgcgagtgcagg 376
                | |||||||    |||| |||||| |  | ||||||||||||||| |||||| |||||||
Sbjct: 22460730 gccaggcagcatgggggtcttggccccctcgacttcgcgtgcgccctgcgcgcgtgcagg 22460671

                  
Query: 377      gg 378
                ||
Sbjct: 22460670 gg 22460669

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 145/182 (79%)
 Strand = Plus / Minus

                                                                            
Query: 197      gtcgcgcccaaggtgttcggctcaatgacgcgccgggcagcggcctcacttaacaagtcg 256
                ||||||||| ||||||||| |  |||||||||||||| ||||||||| ||    | | ||
Sbjct: 22389195 gtcgcgccccaggtgttcgacggaatgacgcgccggggagcggcctccctcgggaggacg 22389136

                                                                            
Query: 257      ctcactgggttccttgcgcacgaagatccggagaagctcctgtcgctctttgcagccaag 316
                ||| | |||||||| ||||| |||||||| |  ||| |||| || || ||||| | ||||
Sbjct: 22389135 ctcgccgggttcctggcgcatgaagatccagccaaggtcctctccctatttgcggacaag 22389076

                                                                            
Query: 317      gtcaggcagtgcaggggccttggctctgttgacttcgcgtgcgccttgcgcgagtgcagg 376
                | |||||||    |||| |||||| |  | ||||||||||||||| |||||| |||||||
Sbjct: 22389075 gccaggcagcatgggggtcttggccccctcgacttcgcgtgcgccctgcgcgcgtgcagg 22389016

                  
Query: 377      gg 378
                ||
Sbjct: 22389015 gg 22389014

>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183414

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 145/182 (79%)
 Strand = Plus / Plus

                                                                         
Query: 197   gtcgcgcccaaggtgttcggctcaatgacgcgccgggcagcggcctcacttaacaagtcg 256
             ||||||||| ||||||||| |  |||||||||||||| ||||||||| ||    | | ||
Sbjct: 46684 gtcgcgccccaggtgttcgacggaatgacgcgccggggagcggcctccctcgggaggacg 46743

                                                                         
Query: 257   ctcactgggttccttgcgcacgaagatccggagaagctcctgtcgctctttgcagccaag 316
             ||| | |||||||| ||||| |||||||| |  ||| |||| || || ||||| | ||||
Sbjct: 46744 ctcgccgggttcctggcgcatgaagatccagccaaggtcctctccctatttgcggacaag 46803

                                                                         
Query: 317   gtcaggcagtgcaggggccttggctctgttgacttcgcgtgcgccttgcgcgagtgcagg 376
             | |||||||    |||| |||||| |  | ||||||||||||||| |||||| |||||||
Sbjct: 46804 gccaggcagcatgggggtcttggccccctcgacttcgcgtgcgccctgcgcgcgtgcagg 46863

               
Query: 377   gg 378
             ||
Sbjct: 46864 gg 46865

>ref|XM_424607.1| PREDICTED: Gallus gallus similar to promethin (LOC427005), mRNA
          Length = 1307

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 307 tgcagccaaggtcaggcagtg 327
           |||||||||||||||||||||
Sbjct: 52  tgcagccaaggtcaggcagtg 32

>gb|AC025479.8| Homo sapiens chromosome 8, clone RP11-358J8, complete sequence
          Length = 176647

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   ctccaccacccccaacctccc 129
             |||||||||||||||||||||
Sbjct: 51247 ctccaccacccccaacctccc 51267

>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence
          Length = 195367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    ctccaccacccccaacctccc 129
              |||||||||||||||||||||
Sbjct: 191806 ctccaccacccccaacctccc 191826

>emb|BX936063.1| Gallus gallus finished cDNA, clone ChEST487f13
          Length = 1382

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 307 tgcagccaaggtcaggcagtg 327
           |||||||||||||||||||||
Sbjct: 127 tgcagccaaggtcaggcagtg 107

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 86      gcgcaggccgccgacctggcc 106
               |||||||||||||||||||||
Sbjct: 1345440 gcgcaggccgccgacctggcc 1345420

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 86      gcgcaggccgccgacctggcc 106
               |||||||||||||||||||||
Sbjct: 5161820 gcgcaggccgccgacctggcc 5161800

>dbj|AP005366.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB565H3, complete
             sequence
          Length = 101002

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   ctccaccacccccaacctccc 129
             |||||||||||||||||||||
Sbjct: 41983 ctccaccacccccaacctccc 41963

>gb|AC145909.3| Gallus gallus BAC clone CH261-43H20 from chromosome unknown, complete
             sequence
          Length = 213402

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 225   cgcgccgggcagcggcctcac 245
             |||||||||||||||||||||
Sbjct: 39845 cgcgccgggcagcggcctcac 39825

>ref|XM_474771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  gccgccgacctggcctcctc 111
           ||||||||||||||||||||
Sbjct: 716 gccgccgacctggcctcctc 697

>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     acagcagccgccgctccggc 87
              ||||||||||||||||||||
Sbjct: 197609 acagcagccgccgctccggc 197628

>emb|AL356244.12| Human DNA sequence from clone RP11-174M15 on chromosome 9 Contains the 5'
              end of the gene for COBW-like protein (LOC55871), 2 novel
              genes, the 5' end of a novel gene (contains FLJ36253 and
              FLJ00026) and a CpG island, complete sequence
          Length = 175153

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ccaccacccccaacctccct 130
              ||||||||||||||||||||
Sbjct: 157524 ccaccacccccaacctccct 157543

>emb|AL158832.13| Human DNA sequence from clone RP11-59O6 on chromosome 9 Contains two
             novel genes, the 5' end of a novel gene (contains FLJ36253
             and FLJ00026) and a CpG island, complete sequence
          Length = 167531

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   ccaccacccccaacctccct 130
             ||||||||||||||||||||
Sbjct: 86759 ccaccacccccaacctccct 86778

>gb|AC090610.6| Homo sapiens chromosome 17, clone RP11-493I24, complete sequence
          Length = 185980

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   aggggccttggctctgttga 348
             ||||||||||||||||||||
Sbjct: 48893 aggggccttggctctgttga 48912

>gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, complete sequence
          Length = 160837

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   ctcctccaccacccccaacctccc 129
             ||||||||||||||||||| ||||
Sbjct: 53938 ctcctccaccacccccaacttccc 53961

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 92      gccgccgacctggcctcctc 111
               ||||||||||||||||||||
Sbjct: 6386730 gccgccgacctggcctcctc 6386749

>dbj|AB112787.1| Sphingomonas sp. KT-1 pahZ2 gene for poly(aspartic acid) hydrolase,
           complete cds
          Length = 1560

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  gccgccgctccggcgcaggccgcc 97
           |||||||| |||||||||||||||
Sbjct: 163 gccgccgccccggcgcaggccgcc 186

>dbj|D00671.1|STMSMPI Streptomyces nigrescens smpi gene for metalloprotease inhibitor,
           complete cds
          Length = 1142

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  ccgctccggcgcaggccgcc 97
           ||||||||||||||||||||
Sbjct: 503 ccgctccggcgcaggccgcc 522

>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17,
             complete sequence
          Length = 147548

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gccgccgacctggcctcctc 111
             ||||||||||||||||||||
Sbjct: 48879 gccgccgacctggcctcctc 48898

>gb|J05219.1|RHMNDVB R.meliloti 319-kDA protein (ndvB) gene, complete cds
          Length = 9062

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   acagcagccgccgctccggc 87
            ||||||||||||||||||||
Sbjct: 4186 acagcagccgccgctccggc 4167


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,726,562
Number of Sequences: 3902068
Number of extensions: 2726562
Number of successful extensions: 61564
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61352
Number of HSP's gapped (non-prelim): 212
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)