ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38c07 |
|---|---|
| Clone Library Name | barley_pub |
>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1| Length = 1588 Score = 34.3 bits (77), Expect = 0.16 Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 17/124 (13%) Frame = -3 Query: 376 CLQDLLPSDG--SSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGRR 203 C+ L S +S ++KQ L L+ PLT S T+ + RRT +TS G Sbjct: 358 CISSFLQSSNELASSLKKQ-LPSFLAQTPLTLPSNTKTPPASARQSSRRTRSTS-GKGFE 415 Query: 202 TRTGVPCQS----LRKLSP-----WVLSLPLSFTSSAP------QLPTPPIRGSVERRSS 68 T+ + S L LSP W S P + ++S+P LPT P+ G ++ Sbjct: 416 TKISINLDSDIKLLNTLSPLETFFWCCSFPSTASTSSPFSYYPESLPT-PLLGRAVNTTA 474 Query: 67 VPTS 56 PTS Sbjct: 475 FPTS 478
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 32.3 bits (72), Expect = 0.62 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%) Frame = -2 Query: 446 APIALLTRRASRPLKTWPPVCSRL----PSGFAPV---GWIFSSGEAKTGLLPL*STIDS 288 AP + + ASR K+WPPV SR P F P+ + SS + +G+ P T D Sbjct: 3626 APSSSASPHASR--KSWPPVGSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMPTDDY 3683 Query: 287 DFQNPTCLSVGTRSSEKNDDDESGGGPPNEDRCP 186 ++ T L S+K+D S P + CP Sbjct: 3684 SEESDTDL------SQKSDGPASPVEGPKDPSCP 3711
>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin| synthase sulfurylase) (MPT synthase sulfurylase) Length = 464 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 198 GQVSPVNHSGSYHHGCFRCLFLSPPQPLNCLR 103 GQ++ NH+G C+RCLF +PP C R Sbjct: 219 GQLTVYNHNGG---PCYRCLFPTPPPTSACQR 247
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = -3 Query: 238 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPT 59 R TTT RRT T P + ++ + S S TSS T PI S S + T Sbjct: 424 RRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVT 483 Query: 58 S 56 S Sbjct: 484 S 484
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)| (FEL protein) Length = 1210 Score = 30.8 bits (68), Expect = 1.8 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 12/103 (11%) Frame = -3 Query: 295 LTPISRTQPASLWGQGLRRRTTTTSLAV---GRRTRTGVPCQSLRKLSPW---------V 152 L P++ +Q G G R ++ V R+ R +P + + LSP + Sbjct: 703 LVPLTESQGPPHSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQSLM 762 Query: 151 LSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGR 23 + + L S PQ PP +GS +R++ PAG E R Sbjct: 763 VKITLDLLSRIPQ---PPGKGSRQRKAEDKQPPAGKKHSSEKR 802
>MURD_SYNP6 (Q5MZA8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 463 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +1 Query: 247 DLVPTERQVGFWKSESMVDQRGSKPVFASPLEKIHPTG-ANPEGSLEQTGGQVFKGLDAL 423 + +PT R GFW E V RG + P+E+ G N + L G++A Sbjct: 250 EALPTSRDRGFWIEEGWVIDRGDR---LFPVERFSMVGNHNQQNLLMAVAAARLAGIEAE 306 Query: 424 RVSKAM 441 +++AM Sbjct: 307 AIAEAM 312
>YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor| Length = 250 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 248 SSEKNDDDESGGGPPNEDRCPLSIT 174 S E +DDD+ GP NE PL +T Sbjct: 128 SDENDDDDDDDEGPSNESSIPLVVT 152
>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)| (TRF1-interacting ankyrin-related ADP-ribose polymerase) Length = 1327 Score = 29.6 bits (65), Expect = 4.0 Identities = 31/119 (26%), Positives = 42/119 (35%) Frame = -3 Query: 382 PDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGRR 203 PD + P DG+S C+++ P+ P +TS A G Sbjct: 75 PDRPRSPDPVDGTSCCSTTSTICTVAAAPVVP-----------------AVSTSSAAGVA 117 Query: 202 TRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEG 26 P S SP S P S +SS+P P + S E T+P G G G Sbjct: 118 PN---PAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPG 173
>SH2D3_MOUSE (Q9QZS8) SH2 domain-containing protein 3C (SH2 domain-containing| Eph receptor-binding protein 1) (Cas/HEF1-associated signal transducer) Length = 854 Score = 29.6 bits (65), Expect = 4.0 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 11/130 (8%) Frame = -3 Query: 385 VPDCLQDLLPSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGR 206 +PD L P S + P TP + QPAS + RR++ L G Sbjct: 395 IPDLHSPLSPISESPSSPAYSTVTRVHAPSATPSTSAQPAS----PVARRSSEPQLCPGN 450 Query: 205 ---------RTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLP-TPPIRGSVERRS-SVPT 59 R P +L K SP S S PP+RGS E+ + P Sbjct: 451 TPKPPGESDRAPHASPSHTLCKASPSPSLSSYSDPDSGHYCQLQPPVRGSREQAAGETPR 510 Query: 58 SPAGVGEEEE 29 G GE ++ Sbjct: 511 KARGSGERQK 520
>NBEA_CHICK (Q9DDD5) Protein neurobeachin (Fragment)| Length = 793 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = -3 Query: 244 RRRTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSV 65 +R T + GR R + SP P F + TP ++ SS+ Sbjct: 684 QRETARSGSQAGRNIRQEIN-------SPTSTETPAVFPENIKDKETPTPVEDIQLESSI 736 Query: 64 PTSPAGVGEEEEGRFLS 14 P + +G+GEE+ L+ Sbjct: 737 PHTDSGIGEEQMPNILN 753
>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 29.3 bits (64), Expect = 5.2 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 3/66 (4%) Frame = -3 Query: 238 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSS--- 68 RT V R P QS W + P S T AP P+P + ER S+ Sbjct: 77 RTGPPRATVHRPLAATSPAQSPETTPLWATAGPSSTTFQAPLGPSPTTPPAAERTSTTSQ 136 Query: 67 VPTSPA 50 PT PA Sbjct: 137 APTRPA 142
>ELHA_APLCA (P01360) Atrial gland peptide A precursor (ELH-18) [Contains:| Atrial gland peptide A; Califin A; Califin A large subunit; Califin A small subunit] Length = 173 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 310 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 399 G++P F +P + +P G G +EQ+ GQ Sbjct: 54 GAQPYFMTPRLRFYPIGKRAAGEMEQSEGQ 83
>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding| factor 1) (Cellular transcription factor ILF-1) Length = 655 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = -3 Query: 238 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQL--PTPPIRGSVERRSSV 65 + T T+L+ +R + ++ + P + L ++ + L P P G++ +S Sbjct: 146 KITFTALSSEKREKQEASESPVKAVQPHISPLTINIPDTMAHLISPLPSPTGTISAANSC 205 Query: 64 PTSPAGVG 41 P+SP G G Sbjct: 206 PSSPRGAG 213
>FUT5_ARATH (Q9SJP4) Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5)| Length = 533 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/68 (29%), Positives = 28/68 (41%) Frame = -3 Query: 229 TTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPA 50 T ++ R+ G SL L PW+L P +FT+ P PP S T P+ Sbjct: 444 TDNIVTSARSTFGYVSYSLGGLKPWLLYQPTNFTT-----PNPPCVRSKSMEPCYLTPPS 498 Query: 49 GVGEEEEG 26 E + G Sbjct: 499 HGCEADWG 506
>ELHL_APLCA (P01361) Atrial gland peptide B precursor (ELH-1L)| Length = 122 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 310 GSKPVFASPLEKIHPTGANPEGSLEQTGGQ 399 G++P F +P + +P G G +EQ+ GQ Sbjct: 54 GAQPYFMTPRLRFYPIGKRAAGGMEQSEGQ 83
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +1 Query: 337 LEKIHPTGANPEGSLEQTGGQVFKGLDALRVSKAMGAGMRQFXI 468 LE + +PE +EQ +V + LD +++ K G G ++F + Sbjct: 774 LEFANEEAVDPEQEIEQIEKKVGEQLDRVKLQKLTGTGRKKFTV 817
>NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking regulator 2)| Length = 2936 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -3 Query: 142 PLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGRFL 17 P +F + + TP ++ SSVP + +G+GEE+ L Sbjct: 1635 PATFPDTVKEKETPTPGEDIQLESSVPHTDSGMGEEQVASIL 1676
>HUNB_DROMM (O46248) Protein hunchback (Fragments)| Length = 158 Score = 28.5 bits (62), Expect = 8.9 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = -3 Query: 370 QDLLPSDGSSQVEKQKLACSLSDPPL-TPISRTQPASLWGQGLRRRTTTTSLAVGRRTRT 194 Q LP+ Q KQ+ L P L P+ PA++ R TTTT+ A T Sbjct: 46 QSPLPNLQLEQYLKQQQQQPLMPPGLPNPMQTIMPANMRPSPTARTTTTTAAAAPTTTAA 105 Query: 193 GVPCQSLRKLSPWVLSLPLSFT 128 + Q+ KL L+ P+ T Sbjct: 106 AIAMQANDKLQ--ALTPPMDVT 125 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,039,519 Number of Sequences: 219361 Number of extensions: 1445814 Number of successful extensions: 5196 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4914 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5186 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
