>SYD_SYNS9 (Q3AVS9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 610

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 377 VSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 282
           V P+++  GDW ALP++ QL    L+  GI R
Sbjct: 183 VLPSRVCGGDWFALPQSPQLFKQLLMVGGIER 214

>SYD_PROMA (Q7V9I1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 605

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 371 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 282
           P+++  GDW ALP++ QL    L+  GI R
Sbjct: 185 PSRVCEGDWFALPQSPQLFKQLLMVGGIER 214

>SYD_GLOVI (Q7NJA4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 595

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 371 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 282
           P+++  GDW ALP++ QL    L+  G  R
Sbjct: 182 PSRVNPGDWFALPQSPQLFKQLLMVAGFDR 211

>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking|
            family 7)
          Length = 5327

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +1

Query: 295  TGSRLERPS**VSGRATQSPTAILVGDTPRSRSPAVTG 408
            +GS+L+RP+      A  S    L GDT  S SPA TG
Sbjct: 5204 SGSKLKRPT-----PAFHSSRTSLAGDTSNSSSPASTG 5236

>SYD_SYNPX (Q7U3K6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 610

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 377 VSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 282
           V P+++  G+W ALP++ QL    L+  GI R
Sbjct: 183 VLPSRVCGGEWFALPQSPQLFKQLLMVGGIER 214

>RL2_CLOAB (Q97EI1) 50S ribosomal protein L2|
          Length = 277

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 413 IVPVTAGERLRGVSPTKIAVGDWVALPETHQLGLSNLLPV 294
           +V    GE+   ++PTK++VGD V       + + N LP+
Sbjct: 93  LVVYADGEKRYIIAPTKLSVGDTVVSGPDADIKIGNALPI 132

>DP2L_HALSA (Q9HMX8) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
           [Contains: Hsp-NRC1 polC intein (Hsp-NRC1 pol2 intein)]
          Length = 1370

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 89  AGSVRPLGHKWDLHGAPREH 30
           AG  R LG+  D+HG P EH
Sbjct: 813 AGQFRELGYNQDIHGDPLEH 832

>SYD_SYNJB (Q2JMA8) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 601

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 371 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 282
           P+++  G+W ALP++ QL    L+  G+ R
Sbjct: 194 PSRVNPGEWFALPQSPQLFKQLLMVAGVDR 223

>SYD_SYNJA (Q2JTZ2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 601

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 371 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 282
           P+++  G+W ALP++ QL    L+  G+ R
Sbjct: 194 PSRVNPGEWFALPQSPQLFKQLLMVAGVDR 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,047,014
Number of Sequences: 219361
Number of extensions: 695559
Number of successful extensions: 2537
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2536
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)