ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45g01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||| | Sbjct: 73 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 132 Query: 282 aacgccagtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||| | |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 133 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 192 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 193 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 252 Query: 402 aacgacctcgacgacgtcgg 421 |||||||||||||||||||| Sbjct: 253 aacgacctcgacgacgtcgg 272
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||| | Sbjct: 155149 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 155208 Query: 282 aacgccagtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||| | |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 155209 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 155268 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 155269 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 155328 Query: 402 aacgacctcgacgacgtcgg 421 |||||||||||||||||||| Sbjct: 155329 aacgacctcgacgacgtcgg 155348
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||| | Sbjct: 46576 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 46635 Query: 282 aacgccagtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||| | |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 46636 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 46695 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 46696 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 46755 Query: 402 aacgacctcgacgacgtcgg 421 |||||||||||||||||||| Sbjct: 46756 aacgacctcgacgacgtcgg 46775
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||| | Sbjct: 5283378 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5283437 Query: 282 aacgccagtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||| | |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 5283438 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5283497 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 5283498 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 5283557 Query: 402 aacgacctcgacgacgtcgg 421 |||||||||||||||||||| Sbjct: 5283558 aacgacctcgacgacgtcgg 5283577
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||| | Sbjct: 219 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 278 Query: 282 aacgccagtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||| | |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 279 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 338 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 339 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 398 Query: 402 aacgacctcgacgacgtcgg 421 |||||||||||||||||||| Sbjct: 399 aacgacctcgacgacgtcgg 418
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||| | Sbjct: 5284165 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5284224 Query: 282 aacgccagtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||| | |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 5284225 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5284284 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 5284285 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 5284344 Query: 402 aacgacctcgacgacgtcgg 421 |||||||||||||||||||| Sbjct: 5284345 aacgacctcgacgacgtcgg 5284364
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 216 bits (109), Expect = 4e-53 Identities = 169/189 (89%) Strand = Plus / Plus Query: 230 gtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgtcaacgccag 289 |||||||||||| |||||||| ||| |||| ||||||||||| ||||||| |||||| | Sbjct: 227 gtggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgg 286 Query: 290 tatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccgctcggccg 349 |||||||||| ||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 287 aatgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccg 346 Query: 350 cctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacct 409 ||||| ||||||||| |||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 347 cctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacct 406 Query: 410 cgacgacgt 418 ||||||||| Sbjct: 407 cgacgacgt 415
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacga 415 ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacga 359
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| |||||||||||||| ||||| |||||||||||||| || ||||||||||||| Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgacgtcggca 262
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 491
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 352
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 492
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 3349
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 24553
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 333
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 19511
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||| Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggca 1853
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||| |||||||||| |||||||||||||||||||| |||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacctcgaaaacgtcggc 3553642
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| |||||||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgacaacgtcggc 160199
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||||| |||||||||| ||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||| |||||||||| ||||||||||||||||||||| | |||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacctcgacaatgtcggc 1704500
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacga 415 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacga 269
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcgg 421 ||||||||| | |||||||| |||||||||||||||||||| ||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacctcgagaacgtcgg 4336076 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 4161736 ccgctcggccgcctgcgccg 4161755
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| || | |||||||| ||||||||||||||||||||| | |||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacctcgacaatgtcggc 25604
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||||||||| | || ||||| ||||||||||||||||| ||||| |||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacgaggtcggc 2140808
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 367 acacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgt 418 |||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgaccttgaagacgt 2171005
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||||| | |||||||| ||||||||||||||||| || |||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacctggaaaacgtcggc 4160965 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 2728320 gtcttcctcggcgccgccga 2728339
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 586
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 586
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 651
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 1821439
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 1947093
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 660
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 639
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 320
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 320
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 4275996
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 462
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||||||||||||||| |||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacctcgagaacgtcggc 583646
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 652
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 ||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacctggatgacgtgggca 644
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 80749
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 6318168
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||||||||||||||| |||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcgagaacgtcggc 841550
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggca 166565
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaa 403 |||| ||||||||||||||| ||||| ||||||||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaa 113
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 378 tgcatccgcgccggaggcaagcacaacgac 407 ||||||||||| |||||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||||||| ||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacctcgac 2422285
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 ||||| ||||||||||| |||||||| || ||||| |||||| | ||||| ||||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgacttggacgatgtcggca 302
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 ||||| ||||||||||| |||||||| || ||||| |||||| | ||||| ||||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgacttggacgatgtcggca 10568
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 ||||| ||||||||||| |||||||| || ||||| |||||| | ||||| ||||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgacttggacgatgtcggca 297
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacctcga 906223
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 ||||||||||| || || || ||||| ||||||||||||||||| |||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgacgttggca 319 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 252 cccttcgaggaccccacgctcctgttcgtcaacgccagtatgaaccagtacaa 304 |||| ||| ||||| ||||| || |||| ||||||| |||||||||||||||| Sbjct: 148 ccctacgatgacccaacgcttctcttcgccaacgccggtatgaaccagtacaa 200
>ref|XM_532155.2| PREDICTED: Canis familiaris similar to alanyl-tRNA synthetase like (LOC474920), mRNA Length = 2958 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 276 ttcgtcaacgccagtatgaaccagtacaagccggtcttcct 316 |||||||||||| | |||||||||| ||||||| ||||||| Sbjct: 220 ttcgtcaacgccggcatgaaccagttcaagccgatcttcct 260
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacctcga 273263
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacctcga 289240
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacctcga 194253
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacct 366
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacct 366
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgt 418 ||||| |||||||| ||||| || || ||||||||||||||||| || ||||| Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgt 1350694
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgt 418 ||||| |||||||| ||||| || || ||||||||||||||||| || ||||| Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgt 275 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgtcaacgccagtatgaaccagtacaagccggtcttcct 316 ||||||||||| |||| | |||||| | |||||||||| ||||||| ||||||| Sbjct: 118 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 173
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||||| |||| ||||| ||||||||||||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacct 164035 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgtcaacgccagtatgaaccagtacaag 305 ||||| ||||||||||||| ||| ||| | |||||||||| |||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagttcaag 163946
>ref|XM_970534.1| PREDICTED: Tribolium castaneum similar to CG4633-PA (LOC664536), mRNA Length = 3135 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgac 407 |||||||||||||| | ||||||||| ||||||||| Sbjct: 412 cagaagtgcatccgagtcggaggcaaacacaacgac 447
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| | |||||||| ||||||||||||||||| ||| | |||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacctggacaatgtcggc 9697
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Minus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacct 409 ||||||||||| | || |||||||||||||| |||||||| Sbjct: 1680298 cccagaagtgcgttcgggccggaggcaagcataacgacct 1680259
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| ||| | |||||||| ||||||||||||||||| || |||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacctggaaaacgtcggc 9261
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| ||| | |||||||| ||||||||||||||||| || |||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacctggaaaacgtcggc 12639
>gb|AY846866.1| Antheraea pernyi nucleopolyhedrovirus occlusion-derived virus envelope-56 protein (odv-e56) gene, complete cds Length = 1602 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 cgccgccgacccggactcgccgc 342 ||||||||||||||||||||||| Sbjct: 990 cgccgccgacccggactcgccgc 1012
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| || |||||||||||||||||||| |||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacctcgagaacgtcggc 1524979
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 46.1 bits (23), Expect = 0.094 Identities = 50/59 (84%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggca 423 |||||| |||||||||||||| || || ||||| ||||| ||||| || ||||| |||| Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacctggatgacgtgggca 303
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 cgccgccgacccggactcgccgc 342 ||||||||||||||||||||||| Sbjct: 7946 cgccgccgacccggactcgccgc 7968
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||| |||||||||||| | |||||| Sbjct: 166334 cgcgccggcggcaagcataacgacctcgacaatgtcggc 166296
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||| |||||||||||| | |||||| Sbjct: 2240 cgcgccggcggcaagcataacgacctcgacaatgtcggc 2278
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 354
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||| || |||||||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacctggaaaacgtcggc 3072304
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 281 caacgccagtatgaaccagtacaagcc 307 ||||||| ||||||||||||||||||| Sbjct: 138 caacgccggtatgaaccagtacaagcc 164 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 aagtgcatccgcgccggaggcaagcacaacga 406 |||||||| || |||||||| ||||||||||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacga 263
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||| || |||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacctggaaaacgtcggc 3479167
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 354
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||||||||| ||||| |||||||| Sbjct: 598444 cgcgccggcggcaagcacaacgatctcgagaacgtcggc 598406
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 410
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 351
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgt 418 |||||||| |||||||||||||| |||||| |||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgacaacgt 1319518
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||| |||||||| |||||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacctcgataacgtcggc 3251653 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 gactcgccgctcggccgcctgcgc 356 ||||||||| |||||||||||||| Sbjct: 3882430 gactcgccggtcggccgcctgcgc 3882453
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcga 243621
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 99764
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 412 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 456
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 281 caacgccagtatgaaccagtacaagcc 307 ||||||| ||||||||||||||||||| Sbjct: 553285 caacgccggtatgaaccagtacaagcc 553259 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 aagtgcatccgcgccggaggcaagcacaacga 406 |||||||| || |||||||| ||||||||||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacga 553160
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Minus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgac 413 ||||| ||| ||||||| || ||||||||||| ||||||||| Sbjct: 2184182 cagaaatgcgtccgcgcgggcggcaagcacaatgacctcgac 2184141
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcgg 421 |||||||| ||||||||||| || |||||| ||||||| Sbjct: 1420447 cgcgccggcggcaagcacaatgatctcgacaacgtcgg 1420484
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||| ||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacctcgac 1472
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 393 ggcaagcacaacgacctcgacgacgtcggc 422 |||||||||||||||||||| |||||||| Sbjct: 594218 ggcaagcacaacgacctcgaaaacgtcggc 594189
>emb|AJ243674.3|SGR243674 Streptomyces griseus subsp. griseus (partial) ppk, mutT, pstS, pstC, pstA, pstB, pitH genes and ORF Length = 9302 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 ggtcttcctcggcgccgccgacccgg 333 |||| ||||||||||||||||||||| Sbjct: 3000 ggtcgtcctcggcgccgccgacccgg 3025
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||||||| |||||||| |||||||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacctcgac 47225
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||||||| |||||||||||||| |||||| Sbjct: 3880128 cgcgccggcggcaagcacaacgatctcgac 3880157
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>ref|XM_921089.2| PREDICTED: Mus musculus hypothetical LOC634280 (LOC634280), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>ref|XM_898698.2| PREDICTED: Mus musculus hypothetical LOC625276 (LOC625276), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>dbj|AK183233.1| Mus musculus cDNA, clone:Y0G0125D01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 373 agaagtgcatccgcgccggaggcaagcacaacgacct 409 |||| |||||||| || || ||||||||||||||||| Sbjct: 182 agaaatgcatccgagctgggggcaagcacaacgacct 218
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 acaagccggtcttcctcggcgccgccgac 329 ||||| |||||||| |||||||||||||| Sbjct: 575415 acaagtcggtcttcgtcggcgccgccgac 575443
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 23900 cgctcggccgcctgcgccgtg 23880
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||| |||||||| || || ||||| ||||||||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacct 254
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgac 413 ||||||| ||| | ||||| || ||||||||||| ||||||||| Sbjct: 2161380 cccagaaatgcgtgcgcgcaggcggcaagcacaatgacctcgac 2161337
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacct 409 ||||||||||| | || ||||| || |||||||||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacct 232630
>ref|XM_467910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>gb|BC008881.2| Homo sapiens kinesin 2, transcript variant 1, mRNA (cDNA clone MGC:15245 IMAGE:4301579), complete cds Length = 2595 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 gtatgaaccagtacaagccggtcttcct 316 ||||||||||||||||||| ||||||| Sbjct: 732023 gtatgaaccagtacaagcctctcttcct 731996
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ctcgacgacgtcggcaggac 427 |||||||||||||||||||| Sbjct: 1490629 ctcgacgacgtcggcaggac 1490610
>ref|XM_363444.1| Magnaporthe grisea 70-15 hypothetical protein (MG01370.4) partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 acacgccgtggccgtcgagc 242 |||||||||||||||||||| Sbjct: 943 acacgccgtggccgtcgagc 924
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 387 gccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||||||||||| ||||| ||| |||||||| Sbjct: 701061 gccgggggcaagcacaatgacctggacaacgtcggc 701096
>ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9320.2), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ctggccgtccgccctggtcc 186 |||||||||||||||||||| Sbjct: 2580 ctggccgtccgccctggtcc 2599
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 387 gccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||||||||||||||||| || |||||||| Sbjct: 2010644 gccggtggcaagcacaacgacctggaaaacgtcggc 2010679
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 387 gccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||||||||||||||||| || |||||||| Sbjct: 4050725 gccggtggcaagcacaacgacctggaaaacgtcggc 4050690
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 134136 ctcggccgcctgcgccgtgc 134155
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 133096 ctcggccgcctgcgccgtgc 133115
>ref|XM_851041.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 3 (LOC482962), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_851001.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 2 (LOC482962), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_540075.2| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 1 (LOC482962), mRNA Length = 2269 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gtatgaaccagtacaagccggtcttcct 316 ||||||||||||||||||| ||||||| Sbjct: 400 gtatgaaccagtacaagcctctcttcct 427
>gb|DQ417138.1| Ictalurus punctatus clone SBBD12B alanyl-tRNA synthetase-like mRNA, partial cds Length = 349 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccg 385 |||||||||||||||||||| Sbjct: 283 aacacccagaagtgcatccg 302
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 133375 ctcggccgcctgcgccgtgc 133394
>ref|NM_005552.3| Homo sapiens kinesin 2 (KNS2), transcript variant 1, mRNA Length = 2595 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1), interleukin 10 (IL-10), ankyrin-repeat protein ANK-2 (ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia virus F10L-like protein (F10L), vaccinia virus F9L-like protein (F9L), vascular endothelial growth factor-like protein (VEGF-E), and ORF3 genes, complete cds Length = 9979 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 7314 ctcggccgcctgcgccgtgc 7333
>gb|DQ066215.1| Ixodes scapularis isolate ISUFL14 ADP/ATP translocase mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 agtacaagccggtcttcctcggcg 321 ||||||||| |||||||||||||| Sbjct: 281 agtacaagcaggtcttcctcggcg 304
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 32040633 gtcttcctcggcgccgccga 32040652
>emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chromosome 2, complete sequence Length = 187610 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 caagtcaaagccaagagctaggga 73 |||||||||||| ||||||||||| Sbjct: 109716 caagtcaaagcctagagctaggga 109739
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 61008 gtcttcctcggcgccgccga 61027
>dbj|AK069088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007I17, full insert sequence Length = 1559 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgccgctcggccgcctgcgc 356 |||||||||||||||||||| Sbjct: 2089326 cgccgctcggccgcctgcgc 2089345
>emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in linkage group 22, complete sequence Length = 76145 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcacagcgcgccgcctgctc 41 |||||||||||||||||||| Sbjct: 28184 tcacagcgcgccgcctgctc 28203
>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22, complete sequence Length = 183103 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcacagcgcgccgcctgctc 41 |||||||||||||||||||| Sbjct: 18290 tcacagcgcgccgcctgctc 18271
>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191563 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 52087 ccgctcggccgcctgcgccg 52106
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ggcaagcacaacgacctcga 412 |||||||||||||||||||| Sbjct: 1322152 ggcaagcacaacgacctcga 1322171
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| ||| | ||||| || ||||||||||||||||| || |||||||| Sbjct: 1732602 ccagaaatgcctgcgcgcgggcggcaagcacaacgacctggaaaacgtcggc 1732551
>gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L homolog genes, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 1659 ctcggccgcctgcgccgtgc 1678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,469,585 Number of Sequences: 3902068 Number of extensions: 2469585 Number of successful extensions: 59676 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55751 Number of HSP's gapped (non-prelim): 3924 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
