ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl47a10 |
|---|---|
| Clone Library Name | barley_pub |
>ARGC_VIBVY (Q7MH70) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 334 Score = 28.9 bits (63), Expect = 3.2 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 124 FCSVAWSPRGQHVVTASAAD 183 FC + W +GQH++ SA D Sbjct: 288 FCDLGWKVQGQHIIVISAID 307
>ARGC_VIBVU (P59313) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 334 Score = 28.5 bits (62), Expect = 4.2 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 124 FCSVAWSPRGQHVVTASAAD 183 FC + W +GQH++ SA D Sbjct: 288 FCDLGWRVQGQHIIVISAID 307
>ARGC_VIBPA (Q87L55) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 334 Score = 28.5 bits (62), Expect = 4.2 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 124 FCSVAWSPRGQHVVTASAAD 183 FC + W +G+H++ SA D Sbjct: 288 FCDIGWKVQGEHIIVISAID 307
>AAAS_MOUSE (P58742) Aladin (Adracalin)| Length = 546 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 112 GSPAFCSVAWSPRGQHVVTASAADVAILIHD 204 G S+AW+P G +++AS D IL+ D Sbjct: 243 GHTPVTSLAWAPNGGWLLSASPVDAVILVWD 273
>ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA) Length = 396 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Frame = +1 Query: 7 SHQLTKKSSDAKHLSRGIAMKGRAVKLREAHKAGSGS-------PAFCSVAWSPRGQHVV 165 SH ++ S+ KH + +G V+L + K+GS S +V+WSPR +++ Sbjct: 146 SHHMSPVST--KHCLVAVGTRGPKVQLCDL-KSGSCSHILQGHRQEILAVSWSPRYDYIL 202 Query: 166 TASAADVAILIHD 204 ++AD + + D Sbjct: 203 ATASADSRVKLWD 215
>TTLL4_HUMAN (Q14679) Tubulin--tyrosine ligase-like protein 4| Length = 1199 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/54 (33%), Positives = 21/54 (38%) Frame = -2 Query: 203 SWIRMATSAADAVTTCCPRGDQATEQKAGEPEPALCASRSLTARPFMAMPRERC 42 SW A A C D + Q + A R LTAR F MPR+ C Sbjct: 303 SWYNRNNLAMRAEPLSCALDDSSDSQDPTKEIRFTEAVRKLTARGFEKMPRQGC 356
>ARGC_VIBF1 (Q5E2E5) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 334 Score = 28.1 bits (61), Expect = 5.5 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 124 FCSVAWSPRGQHVVTASAAD 183 FC + W +G+H++ SA D Sbjct: 288 FCDIGWKVQGEHLIVVSAID 307
>LGT_MYCPA (P60972) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 427 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 Query: 149 RGDQATEQKAGEPEPALCASRSLTARPFMAMPRE 48 RG+Q E++ EPEPA A+ + A +A P + Sbjct: 286 RGNQYVEEEPAEPEPATVAATTEAATEGVAAPAD 319
>AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)| Length = 546 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 112 GSPAFCSVAWSPRGQHVVTASAADVAILIHD 204 G S+AW+P G +++AS D AI + D Sbjct: 243 GHTPVTSLAWAPSGGRLLSASPVDAAIRVWD 273
>ARGC_VIBCH (Q9KNT6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 333 Score = 27.7 bits (60), Expect = 7.2 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 124 FCSVAWSPRGQHVVTASAAD 183 FC + W +G+H++ SA D Sbjct: 287 FCDLGWKVQGRHIIVVSAID 306
>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD| repeat protein CSA homolog) Length = 397 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Frame = +1 Query: 7 SHQLTKKSSDAKHLSRGIAMKGRAVKLREAHKAGSGS-------PAFCSVAWSPRGQHVV 165 SH ++ ++ KH + +G V+L + K+GS S +V+WSPR +++ Sbjct: 146 SHHMSPAAT--KHCLVAVGTRGPKVQLCDL-KSGSCSHILQGHRQEILAVSWSPRHDYIL 202 Query: 166 TASAADVAILIHD 204 ++AD + + D Sbjct: 203 ATASADSRVKLWD 215
>A16L1_HUMAN (Q676U5) Autophagy-related protein 16-1 (APG16-like 1)| Length = 607 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 115 SPAFCSVAWSPRGQHVVTASAADVAIL 195 S + +VAWSP G HVV+ A+L Sbjct: 577 SSSINAVAWSPSGSHVVSVDKGCKAVL 603
>K0323_HUMAN (O15037) Protein KIAA0323| Length = 678 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 19 TKKSSDAKHLSRGIAMKGRAVKLREAHKAGSG 114 T+ SS A+H SRG A G+ + RE K G Sbjct: 597 TQGSSKAQHPSRGFAEHGKQQQGREEEKGSGG 628
>ARGC_MORPR (Q9K4Z6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 336 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +1 Query: 121 AFCSVAWSPRGQHVVTASAAD 183 A+C +AW +GQ ++ SA D Sbjct: 289 AYCDLAWQQQGQDLIVVSAID 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,843,287 Number of Sequences: 219361 Number of extensions: 395822 Number of successful extensions: 1703 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1640 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1703 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
