>RS3_RALSO (Q8XV18) 30S ribosomal protein S3|
          Length = 264

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 323 DWPKVEQPEEEQQLRGGREP*RPRTSEIRP 234
           D P VE+P+EE++ R GR   R R  E RP
Sbjct: 212 DAPVVEEPQEERRKRPGRPEGRRREGEGRP 241

>DVL1_PANTR (Q5IS48) Segment polarity protein dishevelled homolog DVL-1|
           (Dishevelled-1) (DSH homolog 1)
          Length = 670

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KQSGPLRRVRARPAREKNRRAAASG 77
           K SG  R  R  P REK RRAA +G
Sbjct: 549 KSSGSTRSSRRAPGREKERRAAGAG 573

>DVL1_HUMAN (O14640) Segment polarity protein dishevelled homolog DVL-1|
           (Dishevelled-1) (DSH homolog 1)
          Length = 670

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   KQSGPLRRVRARPAREKNRRAAASG 77
           K SG  R  R  P REK RRAA +G
Sbjct: 549 KSSGSTRSSRRAPGREKERRAAGAG 573

>OBP_BHV1C (P52377) Replication origin binding protein (OBP)|
          Length = 859

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 24  RVRARPAREKNRRAAASGLPSP 89
           R R RPA   + RA A+G+PSP
Sbjct: 509 RARRRPAAAADLRALAAGIPSP 530

>RS3_RALEJ (Q46WF0) 30S ribosomal protein S3|
          Length = 264

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 323 DWPKVEQPEEEQQLRGGREP*RPRTSEIRP 234
           D P VE+P+++++ R GR   R R  E RP
Sbjct: 212 DAPVVEEPQDDRRRRPGRPEGRRREGEGRP 241


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,985,817
Number of Sequences: 219361
Number of extensions: 293486
Number of successful extensions: 779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)