ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X76855.1|SAPUR8 S.alboniger pur8 gene 42 1.1
2ref|NM_119067.1| Arabidopsis thaliana ANAC075; transcription fac... 40 4.4
3gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, com... 40 4.4
4ref|NM_187520.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
5gb|BT016390.1| Zea mays clone Contig223 mRNA sequence 40 4.4
6gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosom... 40 4.4
7gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 4.4
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.4
9gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosom... 40 4.4
10gb|AC125534.4| Mus musculus BAC clone RP23-460A22 from chromosom... 40 4.4
11ref|XM_569325.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 4.4
12gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, com... 40 4.4
13gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosom... 40 4.4
14ref|XM_858301.1| PREDICTED: Canis familiaris similar to Retinobl... 40 4.4
15ref|XM_535303.2| PREDICTED: Canis familiaris similar to Retinobl... 40 4.4
16emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 40 4.4
17gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, co... 40 4.4
18gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 4.4
19gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, compl... 40 4.4
20gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
25gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y... 40 4.4
26gb|AF242860.1|AF242860 Trypanosoma cruzi clone cosmid 1K19 NPK-1... 40 4.4
27dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
28dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
29dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.4
30dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
31dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
32gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2... 40 4.4
33dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
34dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
35dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
36dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
37dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
38dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
39gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome ... 40 4.4
40dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
41gb|AC137692.4| Mus musculus BAC clone RP24-323P9 from 13, comple... 40 4.4
42gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, comple... 40 4.4
43gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome... 40 4.4 
>emb|X76855.1|SAPUR8 S.alboniger pur8 gene
          Length = 1701

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 268  cccgcaagaggcgggggcggcggcg 292
            |||||| ||||||||||||||||||
Sbjct: 1286 cccgcacgaggcgggggcggcggcg 1310
to top
>ref|NM_119067.1| Arabidopsis thaliana ANAC075; transcription factor AT4G29230
           (ANAC075) mRNA, complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  cggcggaggcggcggagagt 115
           ||||||||||||||||||||
Sbjct: 726 cggcggaggcggcggagagt 745
to top
>gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, complete sequence
          Length = 152264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gagagtggggaggggaaagg 70
             ||||||||||||||||||||
Sbjct: 15032 gagagtggggaggggaaagg 15051
to top
>ref|NM_187520.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccacggcggaggcggcggag 112
           ||||||||||||||||||||
Sbjct: 277 ccacggcggaggcggcggag 258
to top
>gb|BT016390.1| Zea mays clone Contig223 mRNA sequence
          Length = 1104

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 ggcgggggcggcggcgacca 296
           ||||||||||||||||||||
Sbjct: 55  ggcgggggcggcggcgacca 74
to top
>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete
             sequence
          Length = 164905

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gagagtggggaggggaaagg 70
             ||||||||||||||||||||
Sbjct: 33437 gagagtggggaggggaaagg 33456
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     gcggaggcggcggagagtgt 117
              ||||||||||||||||||||
Sbjct: 966923 gcggaggcggcggagagtgt 966904
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      ccacggcggaggcggcggag 112
               ||||||||||||||||||||
Sbjct: 8596015 ccacggcggaggcggcggag 8595996
to top
>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence
          Length = 210387

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gagagtggggaggggaaagg 70
             ||||||||||||||||||||
Sbjct: 63627 gagagtggggaggggaaagg 63646
to top
>gb|AC125534.4| Mus musculus BAC clone RP23-460A22 from chromosome 13, complete
             sequence
          Length = 181040

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   tccctgcctgctgccccgtt 225
             ||||||||||||||||||||
Sbjct: 75105 tccctgcctgctgccccgtt 75124
to top
>ref|XM_569325.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNB03920) partial mRNA
          Length = 3855

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  gcaagaggcgggggcggcgg 290
            ||||||||||||||||||||
Sbjct: 3673 gcaagaggcgggggcggcgg 3692
to top
>gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, complete sequence
          Length = 179509

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   gctgaagcacgtggaggtgg 170
             ||||||||||||||||||||
Sbjct: 71321 gctgaagcacgtggaggtgg 71302
to top
>gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosome 1, complete sequence
          Length = 178992

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gagagtggggaggggaaagg 70
              ||||||||||||||||||||
Sbjct: 106540 gagagtggggaggggaaagg 106559
to top
>ref|XM_858301.1| PREDICTED: Canis familiaris similar to Retinoblastoma-like protein
           2 (130 kDa retinoblastoma-associated protein) (PRB2)
           (P130) (RBR-2), transcript variant 3 (LOC478127), mRNA
          Length = 2389

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 gaggcgggggcggcggcgac 294
           ||||||||||||||||||||
Sbjct: 123 gaggcgggggcggcggcgac 104
to top
>ref|XM_535303.2| PREDICTED: Canis familiaris similar to Retinoblastoma-like protein
           2 (130 kDa retinoblastoma-associated protein) (PRB2)
           (P130) (RBR-2), transcript variant 1 (LOC478127), mRNA
          Length = 4080

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 gaggcgggggcggcggcgac 294
           ||||||||||||||||||||
Sbjct: 123 gaggcgggggcggcggcgac 104
to top
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     cggcggaggcggcggagagt 115
              ||||||||||||||||||||
Sbjct: 139889 cggcggaggcggcggagagt 139908
to top
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence
          Length = 186963

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   gagagtggggaggggaaagg 70
            ||||||||||||||||||||
Sbjct: 9795 gagagtggggaggggaaagg 9776
to top
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     gcaagaggcgggggcggcgg 290
               ||||||||||||||||||||
Sbjct: 1152050 gcaagaggcgggggcggcgg 1152031
to top
>gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, complete sequence
          Length = 160557

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    ccccatgcctccgaatccctgcct 214
              |||||||| |||||||||||||||
Sbjct: 144634 ccccatgcatccgaatccctgcct 144657
to top
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ccacggcggaggcggcggag 112
             ||||||||||||||||||||
Sbjct: 76987 ccacggcggaggcggcggag 76968
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      acggcggaggcggcggagag 114
               ||||||||||||||||||||
Sbjct: 2398961 acggcggaggcggcggagag 2398942
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 91       gtccacggcggaggcggcgg 110
                ||||||||||||||||||||
Sbjct: 25773068 gtccacggcggaggcggcgg 25773087
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      ccacggcggaggcggcggag 112
               ||||||||||||||||||||
Sbjct: 8593850 ccacggcggaggcggcggag 8593831
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 95       acggcggaggcggcggagag 114
                ||||||||||||||||||||
Sbjct: 30787802 acggcggaggcggcggagag 30787783



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 95       acggcggaggcggcggagag 114
                ||||||||||||||||||||
Sbjct: 18134919 acggcggaggcggcggagag 18134900
to top
>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence
          Length = 178377

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    gagcgagagtggggagggga 66
             ||||||||||||||||||||
Sbjct: 28354 gagcgagagtggggagggga 28335
to top
>gb|AF242860.1|AF242860 Trypanosoma cruzi clone cosmid 1K19 NPK-1 protein kinase-like protein
             gene, complete cds; and unknown genes
          Length = 39465

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   agaggcgggggcggcggcga 293
             ||||||||||||||||||||
Sbjct: 19285 agaggcgggggcggcggcga 19304
to top
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0095O23
          Length = 159792

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    acggcggaggcggcggagag 114
             ||||||||||||||||||||
Sbjct: 77371 acggcggaggcggcggagag 77352
to top
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487D09
          Length = 161531

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     acggcggaggcggcggagag 114
              ||||||||||||||||||||
Sbjct: 127949 acggcggaggcggcggagag 127930
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      acggcggaggcggcggagag 114
               ||||||||||||||||||||
Sbjct: 3865809 acggcggaggcggcggagag 3865790
to top
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0416A11
          Length = 171519

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    gtccacggcggaggcggcgg 110
             ||||||||||||||||||||
Sbjct: 55272 gtccacggcggaggcggcgg 55291
to top
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0047E05
          Length = 184323

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    acggcggaggcggcggagag 114
             ||||||||||||||||||||
Sbjct: 58320 acggcggaggcggcggagag 58301
to top
>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
             gene, partial cds, complete sequence
          Length = 188078

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gagagtggggaggggaaagg 70
             ||||||||||||||||||||
Sbjct: 35115 gagagtggggaggggaaagg 35134
to top
>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full
           insert sequence
          Length = 4054

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccacggcggaggcggcggag 112
           ||||||||||||||||||||
Sbjct: 330 ccacggcggaggcggcggag 311
to top
>dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A05, full
           insert sequence
          Length = 1071

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccacggcggaggcggcggag 112
           ||||||||||||||||||||
Sbjct: 377 ccacggcggaggcggcggag 358
to top
>dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014L15, full
           insert sequence
          Length = 1096

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccacggcggaggcggcggag 112
           ||||||||||||||||||||
Sbjct: 390 ccacggcggaggcggcggag 371
to top
>dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F15, full
           insert sequence
          Length = 1126

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccacggcggaggcggcggag 112
           ||||||||||||||||||||
Sbjct: 420 ccacggcggaggcggcggag 401
to top
>dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020N11, full
           insert sequence
          Length = 2010

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  gtccacggcggaggcggcgg 110
           ||||||||||||||||||||
Sbjct: 821 gtccacggcggaggcggcgg 840
to top
>dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090O06, full
           insert sequence
          Length = 2127

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  gtccacggcggaggcggcgg 110
           ||||||||||||||||||||
Sbjct: 800 gtccacggcggaggcggcgg 819
to top
>gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome 7, complete sequence
          Length = 221912

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gagagtggggaggggaaagg 70
              ||||||||||||||||||||
Sbjct: 120903 gagagtggggaggggaaagg 120922
to top
>dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C07, full
           insert sequence
          Length = 1134

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccacggcggaggcggcggag 112
           ||||||||||||||||||||
Sbjct: 422 ccacggcggaggcggcggag 403
to top
>gb|AC137692.4| Mus musculus BAC clone RP24-323P9 from 13, complete sequence
          Length = 180677

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  tccctgcctgctgccccgtt 225
            ||||||||||||||||||||
Sbjct: 1885 tccctgcctgctgccccgtt 1866
to top
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence
          Length = 207333

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gagagtggggaggggaaagg 70
              ||||||||||||||||||||
Sbjct: 155734 gagagtggggaggggaaagg 155753
to top
>gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome 14, complete sequence
          Length = 171474

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    gagagtggggaggggaaagg 70
             ||||||||||||||||||||
Sbjct: 23040 gagagtggggaggggaaagg 23021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,498,821
Number of Sequences: 3902068
Number of extensions: 2498821
Number of successful extensions: 77220
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76566
Number of HSP's gapped (non-prelim): 654
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top