ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9n22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
2ref|NM_193786.1| Oryza sativa (japonica cultivar-group), predic... 280 5e-72
3dbj|AK068877.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
5dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
6gb|DQ019456.1| Lilium longiflorum clone LP60 unknown mRNA 56 1e-04
7gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete... 44 0.56
8gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete se... 44 0.56
9gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete s... 44 0.56
10gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete se... 44 0.56
11gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete se... 44 0.56
12emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chr... 44 0.56
13gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-3... 44 0.56
14gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence 44 0.56
15emb|AL732514.10| Mouse DNA sequence from clone RP23-219G21 on ch... 44 0.56
16gb|AC121807.3| Mus musculus BAC clone RP23-448N11 from chromosom... 42 2.2
17gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, co... 42 2.2
18gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, comp... 42 2.2
19gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, compl... 42 2.2
20ref|NM_186855.2| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
21ref|XM_506244.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 8.8
22gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, co... 40 8.8
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
24gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 40 8.8
25gb|AC145767.28| Medicago truncatula clone mth2-11f1, complete se... 40 8.8
26gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete se... 40 8.8
27gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete s... 40 8.8
28gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se... 40 8.8
29gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete se... 40 8.8
30gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete seq... 40 8.8
31emb|AL356264.12| Human DNA sequence from clone RP11-452P23 on ch... 40 8.8
32gb|AC138565.3| Gallus gallus clone TAM31-10L3, complete sequence 40 8.8
33gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete s... 40 8.8
34gb|AC161107.24| Medicago truncatula clone mth2-192o12, complete ... 40 8.8
35gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete seq... 40 8.8
36gb|AC146774.7| Medicago truncatula clone mth2-91k24, complete se... 40 8.8
37gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete se... 40 8.8
38gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete s... 40 8.8
39gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-4... 40 8.8
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
42dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
43dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
44dbj|AK098969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
45dbj|AK072884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
46dbj|AK065043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
47emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p1... 40 8.8
48gb|AF134552.1|AF134552 Oryza sativa subsp. indica serine/threoni... 40 8.8
49emb|CT030192.6| M.truncatula DNA sequence from clone MTH2-16D16 ... 40 8.8
50dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.8 
>dbj|AK058445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G05, full
           insert sequence
          Length = 850

 Score =  281 bits (142), Expect = 1e-72
 Identities = 268/310 (86%)
 Strand = Plus / Minus

                                                                       
Query: 325 atcaaatcaatgttttcacatactgatcgagatgtttattgaaaaggtcacacttgattg 384
           |||| ||||||||||| ||||| ||||| || || ||||||||||| || ||||||||||
Sbjct: 639 atcatatcaatgttttgacatattgatcaaggtgcttattgaaaagctcgcacttgattg 580

                                                                       
Query: 385 ggctgccgggagcatacagaggattttttacaacatactccacatataggctgtagatat 444
           |  |||| ||||| |||| |||||||||||||||||| |||||||||||| |||||||||
Sbjct: 579 gtgtgccaggagcgtacaaaggattttttacaacatattccacatataggttgtagatat 520

                                                                       
Query: 445 gcttcagcgcatctcgttgatcaccagttcttggatgggtaaggagaataagctttatac 504
           |||||||||  || |||||||||||||| |||||||| ||||  ||||||||||| ||||
Sbjct: 519 gcttcagcgtgtcacgttgatcaccagtccttggatgtgtaattagaataagcttgatac 460

                                                                       
Query: 505 cagatgggctctccatgtagttcaatttatacgtgtttgtcttgaagctatgaaatgagc 564
           |||| |||||||| | | |||||||||| || ||||||||||||||||| | ||||||||
Sbjct: 459 cagaagggctctctaggaagttcaatttgtatgtgtttgtcttgaagctgtaaaatgagc 400

                                                                       
Query: 565 atccctgacctggcagtagtggcgccccaagattggcgtgttctgttgaggtggggtcga 624
           | ||||| || |||||||||||| ||||||||||  | | ||||| || |||||| ||||
Sbjct: 399 aaccctggcccggcagtagtggcaccccaagattccccttttctgctgtggtgggatcga 340

                     
Query: 625 tcttggcggt 634
           ||||||||||
Sbjct: 339 tcttggcggt 330
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>ref|NM_193786.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 540

 Score =  280 bits (141), Expect = 5e-72
 Identities = 264/305 (86%)
 Strand = Plus / Minus

                                                                       
Query: 330 atcaatgttttcacatactgatcgagatgtttattgaaaaggtcacacttgattgggctg 389
           ||||||||||| ||||| ||||| || || ||||||||||| || |||||||||||  ||
Sbjct: 536 atcaatgttttgacatattgatcaaggtgcttattgaaaagctcgcacttgattggtgtg 477

                                                                       
Query: 390 ccgggagcatacagaggattttttacaacatactccacatataggctgtagatatgcttc 449
           || ||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 476 ccaggagcgtacaaaggattttttacaacatattccacatataggttgtagatatgcttc 417

                                                                       
Query: 450 agcgcatctcgttgatcaccagttcttggatgggtaaggagaataagctttataccagat 509
           ||||  || |||||||||||||| |||||||| ||||  ||||||||||| |||||||| 
Sbjct: 416 agcgtgtcacgttgatcaccagtccttggatgtgtaattagaataagcttgataccagaa 357

                                                                       
Query: 510 gggctctccatgtagttcaatttatacgtgtttgtcttgaagctatgaaatgagcatccc 569
           |||||||| | | |||||||||| || ||||||||||||||||| | ||||||||| |||
Sbjct: 356 gggctctctaggaagttcaatttgtatgtgtttgtcttgaagctgtaaaatgagcaaccc 297

                                                                       
Query: 570 tgacctggcagtagtggcgccccaagattggcgtgttctgttgaggtggggtcgatcttg 629
           || || |||||||||||| ||||||||||  | | ||||| || |||||| |||||||||
Sbjct: 296 tggcccggcagtagtggcaccccaagattccccttttctgctgtggtgggatcgatcttg 237

                
Query: 630 gcggt 634
           |||||
Sbjct: 236 gcggt 232
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>dbj|AK068877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F01, full
           insert sequence
          Length = 869

 Score =  260 bits (131), Expect = 5e-66
 Identities = 268/313 (85%), Gaps = 3/313 (0%)
 Strand = Plus / Minus

                                                                       
Query: 325 atcaaatcaatgttttcacatactgatcgagatgtttattgaaaaggtcacac---ttga 381
           |||| ||||||||||| ||||| ||||| || || ||||||||||| || |||   ||||
Sbjct: 604 atcatatcaatgttttgacatattgatcaaggtgcttattgaaaagctcgcacctgttga 545

                                                                       
Query: 382 ttgggctgccgggagcatacagaggattttttacaacatactccacatataggctgtaga 441
           ||||  |||| ||||| |||| |||||||||||||||||| |||||||||||| ||||||
Sbjct: 544 ttggtgtgccaggagcgtacaaaggattttttacaacatattccacatataggttgtaga 485

                                                                       
Query: 442 tatgcttcagcgcatctcgttgatcaccagttcttggatgggtaaggagaataagcttta 501
           ||||||||||||  || |||||||||||||| |||||||| ||||  ||||||||||| |
Sbjct: 484 tatgcttcagcgtgtcacgttgatcaccagtccttggatgtgtaattagaataagcttga 425

                                                                       
Query: 502 taccagatgggctctccatgtagttcaatttatacgtgtttgtcttgaagctatgaaatg 561
           ||||||| |||||||| | | |||||||||| || ||||||||||||||||| | |||||
Sbjct: 424 taccagaagggctctctaggaagttcaatttgtatgtgtttgtcttgaagctgtaaaatg 365

                                                                       
Query: 562 agcatccctgacctggcagtagtggcgccccaagattggcgtgttctgttgaggtggggt 621
           |||| ||||| || |||||||||||| ||||||||||  | | ||||| || |||||| |
Sbjct: 364 agcaaccctggcccggcagtagtggcaccccaagattccccttttctgctgtggtgggat 305

                        
Query: 622 cgatcttggcggt 634
           |||||||||||||
Sbjct: 304 cgatcttggcggt 292
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 8e-28
 Identities = 109/123 (88%)
 Strand = Plus / Plus

                                                                            
Query: 376      acttgattgggctgccgggagcatacagaggattttttacaacatactccacatataggc 435
                ||||||||||  |||| ||||| |||| |||||||||||||||||| |||||||||||| 
Sbjct: 18132926 acttgattggtgtgccaggagcgtacaaaggattttttacaacatattccacatataggt 18132985

                                                                            
Query: 436      tgtagatatgcttcagcgcatctcgttgatcaccagttcttggatgggtaaggagaataa 495
                ||||||||||||||||||  || |||||||||||||| |||||||| ||||  |||||||
Sbjct: 18132986 tgtagatatgcttcagcgtgtcacgttgatcaccagtccttggatgtgtaattagaataa 18133045

                   
Query: 496      gct 498
                |||
Sbjct: 18133046 gct 18133048



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                            
Query: 501      ataccagatgggctctccatgtagttcaatttatacgtgtttgtcttgaagctatgaaat 560
                |||||||| |||||||| | | |||||||||| || ||||||||||||||||| | ||||
Sbjct: 18133190 ataccagaagggctctctaggaagttcaatttgtatgtgtttgtcttgaagctgtaaaat 18133249

                                                      
Query: 561      gagcatccctgacctggcagtagtggcgccccaagatt 598
                ||||| ||||| || |||||||||||| ||||||||||
Sbjct: 18133250 gagcaaccctggcccggcagtagtggcaccccaagatt 18133287



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 325      atcaaatcaatgttttcacatactgatcgagatgtttattgaaaag 370
                |||| ||||||||||| ||||| ||||| || || |||||||||||
Sbjct: 18132153 atcatatcaatgttttgacatattgatcaaggtgcttattgaaaag 18132198
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>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504D03
          Length = 139201

 Score =  133 bits (67), Expect = 8e-28
 Identities = 109/123 (88%)
 Strand = Plus / Plus

                                                                          
Query: 376    acttgattgggctgccgggagcatacagaggattttttacaacatactccacatataggc 435
              ||||||||||  |||| ||||| |||| |||||||||||||||||| |||||||||||| 
Sbjct: 109367 acttgattggtgtgccaggagcgtacaaaggattttttacaacatattccacatataggt 109426

                                                                          
Query: 436    tgtagatatgcttcagcgcatctcgttgatcaccagttcttggatgggtaaggagaataa 495
              ||||||||||||||||||  || |||||||||||||| |||||||| ||||  |||||||
Sbjct: 109427 tgtagatatgcttcagcgtgtcacgttgatcaccagtccttggatgtgtaattagaataa 109486

                 
Query: 496    gct 498
              |||
Sbjct: 109487 gct 109489



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                          
Query: 501    ataccagatgggctctccatgtagttcaatttatacgtgtttgtcttgaagctatgaaat 560
              |||||||| |||||||| | | |||||||||| || ||||||||||||||||| | ||||
Sbjct: 109631 ataccagaagggctctctaggaagttcaatttgtatgtgtttgtcttgaagctgtaaaat 109690

                                                    
Query: 561    gagcatccctgacctggcagtagtggcgccccaagatt 598
              ||||| ||||| || |||||||||||| ||||||||||
Sbjct: 109691 gagcaaccctggcccggcagtagtggcaccccaagatt 109728



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 325    atcaaatcaatgttttcacatactgatcgagatgtttattgaaaag 370
              |||| ||||||||||| ||||| ||||| || || |||||||||||
Sbjct: 108594 atcatatcaatgttttgacatattgatcaaggtgcttattgaaaag 108639
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>gb|DQ019456.1| Lilium longiflorum clone LP60 unknown mRNA
          Length = 728

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 405 ggattttttacaacatactccacatataggctgtagatatgctt 448
           ||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 473 ggattcttgacaacatactccacatacaggctgtatatatgctt 430
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>gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete sequence
          Length = 196954

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 328   aaatcaatgttttcacatactg 349
             ||||||||||||||||||||||
Sbjct: 34656 aaatcaatgttttcacatactg 34677
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>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence
          Length = 100724

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 197   attatcaaaccaaataacatag 218
             ||||||||||||||||||||||
Sbjct: 19458 attatcaaaccaaataacatag 19437
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>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence
          Length = 130178

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 197  attatcaaaccaaataacatag 218
            ||||||||||||||||||||||
Sbjct: 2592 attatcaaaccaaataacatag 2613
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>gb|AC129091.19| Medicago truncatula clone mth2-15j7, complete sequence
          Length = 106540

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 197   attatcaaaccaaataacatag 218
             ||||||||||||||||||||||
Sbjct: 74428 attatcaaaccaaataacatag 74449
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>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence
          Length = 106560

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 197   attatcaaaccaaataacatag 218
             ||||||||||||||||||||||
Sbjct: 83017 attatcaaaccaaataacatag 83038
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>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part
             of the DNAH8 gene for dynein axonemal heavy polypeptide 8
             and the 5' part of a novel gene, complete sequence
          Length = 56509

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/37 (91%), Gaps = 2/37 (5%)
 Strand = Plus / Plus

                                                  
Query: 175   aacaaatttctcaacaaatagtattatcaaaccaaat 211
             |||||| |||||||||||  |||||||||||||||||
Sbjct: 20144 aacaaaattctcaacaaa--gtattatcaaaccaaat 20178
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>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete sequence
          Length = 113812

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 197    attatcaaaccaaataacatag 218
              ||||||||||||||||||||||
Sbjct: 112945 attatcaaaccaaataacatag 112924
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>gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence
          Length = 172761

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 328    aaatcaatgttttcacatactg 349
              ||||||||||||||||||||||
Sbjct: 103173 aaatcaatgttttcacatactg 103152
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>emb|AL732514.10| Mouse DNA sequence from clone RP23-219G21 on chromosome 4, complete
             sequence
          Length = 220219

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   tattatcaaaccaaataacata 217
             ||||||||||||||||||||||
Sbjct: 50419 tattatcaaaccaaataacata 50398
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>gb|AC121807.3| Mus musculus BAC clone RP23-448N11 from chromosome 16, complete
             sequence
          Length = 178155

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 538   tgtttgtcttgaagctatgaaatga 562
             |||||||||| ||||||||||||||
Sbjct: 92182 tgtttgtctttaagctatgaaatga 92158
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>gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, complete sequence
          Length = 166447

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 540    tttgtcttgaagctatgaaat 560
              |||||||||||||||||||||
Sbjct: 139027 tttgtcttgaagctatgaaat 139047
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>gb|AC009866.6| Homo sapiens chromosome 11, clone RP11-61E7, complete sequence
          Length = 177564

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 540  tttgtcttgaagctatgaaat 560
            |||||||||||||||||||||
Sbjct: 5588 tttgtcttgaagctatgaaat 5608
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>gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, complete sequence
          Length = 187989

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 538    tgtttgtcttgaagctatgaaatga 562
              |||||||||| ||||||||||||||
Sbjct: 186624 tgtttgtctttaagctatgaaatga 186600
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>ref|NM_186855.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcaagtgtacaatacagtgagatt 127
           ||||||||||||||||||| ||||
Sbjct: 704 gcaagtgtacaatacagtgtgatt 681
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>ref|XM_506244.1| PREDICTED Oryza sativa (japonica cultivar-group), P0021G06.122-2
           mRNA
          Length = 872

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcaagtgtacaatacagtgagatt 127
           ||||||||||||||||||| ||||
Sbjct: 779 gcaagtgtacaatacagtgtgatt 756
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>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence
          Length = 155958

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    atttcccaaaacatgaagtg 275
              ||||||||||||||||||||
Sbjct: 105391 atttcccaaaacatgaagtg 105372
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 267      catgaagtgccaatgttctc 286
                ||||||||||||||||||||
Sbjct: 33318598 catgaagtgccaatgttctc 33318617
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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   catgaagtgccaatgttctc 286
             ||||||||||||||||||||
Sbjct: 75114 catgaagtgccaatgttctc 75133
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>gb|AC145767.28| Medicago truncatula clone mth2-11f1, complete sequence
          Length = 134401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 95931 attatcaaaccaaataacat 95950
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>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence
          Length = 129053

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 529    atttatacgtgtttgtcttg 548
              ||||||||||||||||||||
Sbjct: 117790 atttatacgtgtttgtcttg 117809
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>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence
          Length = 117666

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   atttatacgtgtttgtcttg 548
             ||||||||||||||||||||
Sbjct: 33869 atttatacgtgtttgtcttg 33850
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>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 80044 attatcaaaccaaataacat 80063
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>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
          Length = 127126

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  attatcaaaccaaataacat 216
            ||||||||||||||||||||
Sbjct: 5698 attatcaaaccaaataacat 5717
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>gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete sequence
          Length = 116998

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 95952 attatcaaaccaaataacat 95933
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>emb|AL356264.12| Human DNA sequence from clone RP11-452P23 on chromosome 13 Contains
             asmall nuclear ribonucleoprotein polypeptide F
             (SNRPF)(SMF) pseudogene, complete sequence
          Length = 93247

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   gcaacaaatttctcaacaaa 192
             ||||||||||||||||||||
Sbjct: 44552 gcaacaaatttctcaacaaa 44571
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>gb|AC138565.3| Gallus gallus clone TAM31-10L3, complete sequence
          Length = 174604

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 347    ctgatcgagatgtttattgaaaag 370
              |||||||||||||||||| |||||
Sbjct: 151602 ctgatcgagatgtttatttaaaag 151579
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>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence
          Length = 131960

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 35862 attatcaaaccaaataacat 35843
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>gb|AC161107.24| Medicago truncatula clone mth2-192o12, complete sequence
          Length = 106909

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 78592 attatcaaaccaaataacat 78573
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>gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete sequence
          Length = 109841

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    attatcaaaccaaataacat 216
              ||||||||||||||||||||
Sbjct: 106761 attatcaaaccaaataacat 106780
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>gb|AC146774.7| Medicago truncatula clone mth2-91k24, complete sequence
          Length = 122643

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 90419 attatcaaaccaaataacat 90400
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>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence
          Length = 124189

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 65445 attatcaaaccaaataacat 65464
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>gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete sequence
          Length = 108232

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 66647 attatcaaaccaaataacat 66666
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>gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-41a4, complete
            sequence
          Length = 55550

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  attatcaaaccaaataacat 216
            ||||||||||||||||||||
Sbjct: 7687 attatcaaaccaaataacat 7668
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 104     gcaagtgtacaatacagtgagatt 127
               ||||||||||||||||||| ||||
Sbjct: 8386904 gcaagtgtacaatacagtgtgatt 8386881
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 267      catgaagtgccaatgttctc 286
                ||||||||||||||||||||
Sbjct: 33409108 catgaagtgccaatgttctc 33409127
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>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0021G06
          Length = 137678

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 104   gcaagtgtacaatacagtgagatt 127
             ||||||||||||||||||| ||||
Sbjct: 92002 gcaagtgtacaatacagtgtgatt 91979
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>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0056I06
          Length = 138653

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 104   gcaagtgtacaatacagtgagatt 127
             ||||||||||||||||||| ||||
Sbjct: 18497 gcaagtgtacaatacagtgtgatt 18474
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>dbj|AK098969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075B02, full
           insert sequence
          Length = 813

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcaagtgtacaatacagtgagatt 127
           ||||||||||||||||||| ||||
Sbjct: 704 gcaagtgtacaatacagtgtgatt 681
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>dbj|AK072884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L07, full
           insert sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcaagtgtacaatacagtgagatt 127
           ||||||||||||||||||| ||||
Sbjct: 778 gcaagtgtacaatacagtgtgatt 755
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>dbj|AK065043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H21, full
            insert sequence
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  gcaagtgtacaatacagtgagatt 127
            ||||||||||||||||||| ||||
Sbjct: 2610 gcaagtgtacaatacagtgtgatt 2587
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>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE
          Length = 109575

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 53167 attatcaaaccaaataacat 53148
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>gb|AF134552.1|AF134552 Oryza sativa subsp. indica serine/threonine protein phosphatase
            PP2A-2 catalytic subunit (Pp2A) gene, complete cds
          Length = 5750

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  catgaagtgccaatgttctc 286
            ||||||||||||||||||||
Sbjct: 1399 catgaagtgccaatgttctc 1418
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>emb|CT030192.6| M.truncatula DNA sequence from clone MTH2-16D16 on chromosome 3,
             complete sequence
          Length = 112216

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   attatcaaaccaaataacat 216
             ||||||||||||||||||||
Sbjct: 17886 attatcaaaccaaataacat 17905
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>dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208c,
             complete sequence
          Length = 48081

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   aacaaatttctcaacaaata 194
             ||||||||||||||||||||
Sbjct: 10591 aacaaatttctcaacaaata 10572


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,152,036
Number of Sequences: 3902068
Number of extensions: 5152036
Number of successful extensions: 109568
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 109382
Number of HSP's gapped (non-prelim): 185
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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