ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0103200:Os07g0103200 231 6e-61
2AK101541:Os12g0596000 35 0.11
3AK073530:Os12g0596000 35 0.11
4AK102859:Os08g0528700 31 2.1
5Os01g0242700:Os01g0242700 30 2.7
6Os01g0833600:Os01g0833600 30 3.6
7AK099853:Os02g0190800 30 3.6
8AK069019:Os05g0199100 30 4.7
9AK064107:Os09g0531200 30 4.7
10AK062594:Os07g0187900 30 4.7
11Os05g0184000:Os05g0184000 29 6.1
12AK073568:Os01g0201600 29 6.1
13AK066896:Os03g0270200 29 6.1
14Os02g0526700:Os02g0526700 29 8.0

>Os07g0103200:Os07g0103200 |
          Length = 243
 Score =  231 bits (590), Expect = 6e-61
 Identities = 116/134 (86%), Positives = 123/134 (91%)
 Frame = +1

Query: 571 WKGAFSVDAEGTTESETQDGGQGLLHNFVEYIKKQKCVPLEDLAGEFGMRTQDCINRIIT 750
           WKGAFSVDAEGTTES+TQD GQGLLHNFVEYIK QKCVPLEDLA EF MRTQDCINRIIT
Sbjct: 109 WKGAFSVDAEGTTESDTQDDGQGLLHNFVEYIKNQKCVPLEDLAAEFRMRTQDCINRIIT 168

Query: 751 LEGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKHGRVSISHLANNSNEFIDLEPKPLYD 930
           LEGMDRLSGVMDDRGKFIYIS EEM+AVADYIRK GRVSISHLA+NSN+FIDLEPKP Y+
Sbjct: 169 LEGMDRLSGVMDDRGKFIYISTEEMKAVADYIRKQGRVSISHLASNSNQFIDLEPKPQYN 228

Query: 931 EKEESHQDESAPAG 972
             EES+ DE+A AG
Sbjct: 229 --EESNLDENAAAG 240



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>AK101541:Os12g0596000 |
          Length = 305

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
 Frame = +2

Query: 122 SFPSSYG---AAVPMPPARATTTASRPSHSRGN-------GCFVAALRHAACVGG 256
           + P SYG   AA+P P   +   +S P  SRG        GCF AA R AA V G
Sbjct: 2   ALPCSYGSHCAALPFPAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSG 56



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>AK073530:Os12g0596000 |
          Length = 305

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
 Frame = +2

Query: 122 SFPSSYG---AAVPMPPARATTTASRPSHSRGN-------GCFVAALRHAACVGG 256
           + P SYG   AA+P P   +   +S P  SRG        GCF AA R AA V G
Sbjct: 2   ALPCSYGSHCAALPFPAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSG 56



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>AK102859:Os08g0528700 |
          Length = 187

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 20/44 (45%), Positives = 23/44 (52%)
 Frame = +2

Query: 68  TGPAGSWPPSCARCWSLPSFPSSYGAAVPMPPARATTTASRPSH 199
           T P  S PPS  RC      PSS G+A    PAR +  +S PSH
Sbjct: 57  TSPTSSPPPSRTRC-----SPSSPGSA---SPARTSPRSSPPSH 92



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>Os01g0242700:Os01g0242700 |
          Length = 458

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 24/80 (30%), Positives = 31/80 (38%)
 Frame = +2

Query: 98  CARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRRVRR 277
           CA   +  S PS   AA P P AR   +A+ P          AAL            +R 
Sbjct: 358 CAGAATASSRPSGDAAATPPPAARPPPSAAAP----------AALSRRLRAAALSPHLRH 407

Query: 278 QHPPVVMLQRMSQGVTRRTP 337
           + PP V  +  +  V  RTP
Sbjct: 408 RRPPTVSPRAPAPPVRPRTP 427



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>Os01g0833600:Os01g0833600 |
          Length = 172

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +2

Query: 101 ARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRR 268
           A C +L  FP++  AA   P +R+ +   R SH R     VAA+ HA+  G  L R
Sbjct: 8   AACGAL-IFPTTASAA---PVSRSVSVDQRVSHRRRKAVAVAAVPHASSGGALLER 59



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>AK099853:Os02g0190800 |
          Length = 389

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 23/78 (29%), Positives = 28/78 (35%)
 Frame = +2

Query: 101 ARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRRVRRQ 280
           AR    P  P SYGA  P PPA A           G G  V           + RR+R +
Sbjct: 10  ARFAFFPPSPPSYGAEAPPPPAAAGAGVGVEKDGGGGGVVVELTDVPRRGNVEARRLRTK 69

Query: 281 HPPVVMLQRMSQGVTRRT 334
               V+   + Q   R T
Sbjct: 70  RGTEVVAMYVRQAGARLT 87



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>AK069019:Os05g0199100 |
          Length = 329

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +2

Query: 11  CRTKQNRGFGEGHRTLRRWTGPAG------SWPPSCARCWSLPSFPSSYGAAVPMPPARA 172
           C + Q+ G     R  RR +G AG      S   S  RCWS  S+ SS     P P AR+
Sbjct: 72  CTSGQSTG-----RRRRRRSGGAGVPADAASAAASAGRCWSSSSWRSS----PPSPAARS 122

Query: 173 TTTASR 190
           T + +R
Sbjct: 123 TCSTAR 128



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>AK064107:Os09g0531200 |
          Length = 323

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
 Frame = +2

Query: 56  LRRWTGPAGSWPPSCARCWSLPSF---PSSYGAAVPMPPARATTTASRPSHSRGNGCFV- 223
           L R    A  W P  AR  ++  +   P S     P+PP    TT    +  +  GCFV 
Sbjct: 4   LSRLNASAAPWEPPVARAMAVEQYCPPPQSLLPPPPLPPVAVPTTCGCAACLQ--GCFVP 61

Query: 224 ----AALRHAA 244
               AA  HAA
Sbjct: 62  VGVQAAFPHAA 72



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>AK062594:Os07g0187900 |
          Length = 253

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 19/115 (16%)
 Frame = +2

Query: 44  GHRTLRRWTGPAGSWPPSCA--RCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGC 217
           G  T RR   PA + PP+ A  RC S  +   S  ++  +PP  A ++ S  S  RG+  
Sbjct: 135 GSTTRRRAGSPAPASPPAPAATRCASASTASRSPSSSSRLPPCSARSSRSCWSGGRGDST 194

Query: 218 FVAALRHAACV-----------------GGQLRRVRRQHPPVVMLQRMSQGVTRR 331
              + R +A                   GG  RR RR+       +  S+ V RR
Sbjct: 195 RGTSTRGSATATAPSPEREVTAGCRWTSGGGRRRRRRRRSQRRSTEGRSEPVRRR 249



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>Os05g0184000:Os05g0184000 |
          Length = 241

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/70 (32%), Positives = 30/70 (42%)
 Frame = +2

Query: 137 YGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRRVRRQHPPVVMLQRMSQ 316
           +G+A P    RAT   SR S  RG+G  V   R  A  G   RR R++    +       
Sbjct: 133 HGSARPRQRRRATRARSRLSAGRGDG--VGGARGRAVRGSARRRPRKEETTGI------N 184

Query: 317 GVTRRTPMSP 346
           G  RR   +P
Sbjct: 185 GTARRPTSTP 194



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>AK073568:Os01g0201600 |
          Length = 308

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 32  GFGEGHRTLRRWTGPAGSWPPSCARCWSLPSFPSSYGAAVPMPPA-RATTTASRPSHSRG 208
           G G    T     GP+G   PS +   + PS    YGA+ P+ P+         P+ S G
Sbjct: 88  GGGSSGTTPSHGGGPSGGALPSPSHGGAAPSHGGGYGASPPVTPSPGGGYGGGSPAPSHG 147

Query: 209 NGCF 220
            G +
Sbjct: 148 GGAY 151



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>AK066896:Os03g0270200 |
          Length = 840

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 4/120 (3%)
 Frame = +2

Query: 8   PCRTKQNRGFGEGHRTLRRWTGPAGSWPPSCARCWSLPSFP---SSYGAAVPMPPARATT 178
           P  ++ +  FG   R+ RR   P  S+ P      S PS     S Y    P  P   + 
Sbjct: 222 PSPSRNSISFGRQQRSSRRSVSPRRSFSPRKRSPRSTPSMSRRRSPYSRRSPSVPRHRSP 281

Query: 179 TASRPSHSRGNGCFVAALRHAACVGGQLRRVRRQHPPVVMLQRMSQGVTRRTP-MSPKAP 355
           +  R SH                       +RR+ PP V  QR      RR+P  +P++P
Sbjct: 282 SPHRRSH-----------------------IRRKSPPFVR-QRSPSPHHRRSPGRAPRSP 317



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>Os02g0526700:Os02g0526700 |
          Length = 445

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
 Frame = +2

Query: 74  PAGSWPPSCARCWSLPSFPSSYG-AAVPMPPARATTTASRP------SHSRGNGCFVAAL 232
           P G  PP  A   S PSF  +    A P PP R+++ ASR         +  +    ++ 
Sbjct: 72  PLGGHPPPSASPSSPPSFRRAAAVVAEPPPPLRSSSGASRKLIPFGRRKASSSSSSSSSS 131

Query: 233 RHAACVGGQLRRVRRQHP-PVVMLQRMSQGVTRRTP 337
              A  GG L+R +   P P       +  VT  +P
Sbjct: 132 ASVALAGGGLKRSKSVAPRPEEHYSSSASSVTAESP 167


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 34,909,249
Number of extensions: 831570
Number of successful extensions: 3067
Number of sequences better than 10.0: 14
Number of HSP's gapped: 3056
Number of HSP's successfully gapped: 14
Length of query: 416
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 313
Effective length of database: 11,275,632
Effective search space: 3529272816
Effective search space used: 3529272816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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