Clone Name | rbah41f14 |
---|---|
Clone Library Name | barley_pub |
>gb|J01236.1|BLYAMYAA Barley alpha-amylase type A isozyme mRNA, complete cds Length = 1588 Score = 1211 bits (611), Expect = 0.0 Identities = 617/619 (99%) Strand = Plus / Minus Query: 8 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtatagctcat 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1582 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtatagctcat 1523 Query: 68 caattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagtgaatca 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1522 caattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagtgaatca 1463 Query: 128 tgtacttcagaaaattcatgctcgatcgaatgacggatcagtgcagacttcagctccgtt 187 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tgtacttcaggaaattcatgctcgatcgaatgacggatcagtgcagacttcagctccgtt 1403 Query: 188 gtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtgccgagg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 gtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtgccgagg 1343 Query: 248 tcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccacca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 tcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccacca 1283 Query: 308 ccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgc 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 ccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgc 1223 Query: 368 tcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 tcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaa 1163 Query: 428 acccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgt 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 acccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgt 1103 Query: 488 acgcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 acgcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctg 1043 Query: 548 tatcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccggggg 607 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1042 tatcgtggttgtcgacgaaggtggcggccttggccggccaccatcccatcacgccggggg 983 Query: 608 ccttcccctgcgggtcgat 626 ||||||||||||||||||| Sbjct: 982 ccttcccctgcgggtcgat 964
>gb|M17128.1|BLYAMY2 Barley (H.vulgare) alpha-amylase 2 mRNA, complete cds Length = 1588 Score = 1211 bits (611), Expect = 0.0 Identities = 617/619 (99%) Strand = Plus / Minus Query: 8 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtatagctcat 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1582 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtatagctcat 1523 Query: 68 caattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagtgaatca 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1522 caattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagtgaatca 1463 Query: 128 tgtacttcagaaaattcatgctcgatcgaatgacggatcagtgcagacttcagctccgtt 187 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 tgtacttcaggaaattcatgctcgatcgaatgacggatcagtgcagacttcagctccgtt 1403 Query: 188 gtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtgccgagg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 gtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtgccgagg 1343 Query: 248 tcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccacca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 tcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccacca 1283 Query: 308 ccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgc 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 ccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgc 1223 Query: 368 tcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 tcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaa 1163 Query: 428 acccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgt 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 acccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgt 1103 Query: 488 acgcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 acgcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctg 1043 Query: 548 tatcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccggggg 607 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1042 tatcgtggttgtcgacgaaggtggcggccttggccggccaccatcccatcacgccggggg 983 Query: 608 ccttcccctgcgggtcgat 626 ||||||||||||||||||| Sbjct: 982 ccttcccctgcgggtcgat 964
>emb|Y11277.1|HVAA40AMY H.vulgare mRNA for alph-amylase, clone aa40 Length = 1615 Score = 642 bits (324), Expect = 0.0 Identities = 441/480 (91%) Strand = Plus / Minus Query: 144 catgctcgatcgaatgacggatcagtgcagacttcagctccgttgtagtgttgccgcggc 203 |||||||||| ||||| |||| |||| || |||||||||||||||||||| |||||||| Sbjct: 1383 catgctcgattgaatggtggatgagtggaggcttcagctccgttgtagtgtcgccgcggc 1324 Query: 204 accgttcttctcccagacggcgtagtcgttgccgtgtgccgaggtcacgaacccggccgg 263 | || |||||||||| ||||||||||| |||||||| ||||| || ||||||| ||||| Sbjct: 1323 agcggtcttctcccatacggcgtagtccttgccgtgcgccgacgttgcgaacccagccgg 1264 Query: 264 gatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctc 323 ||||||||||||||||||||| |||| |||||| |||||||||||||||||||| ||||| Sbjct: 1263 gatcaccgccccgacgtcgtatctggtcccgattttcaccaccaccttgccgtcgatctc 1204 Query: 324 ggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgcc 383 ||||||||||| |||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 1203 cgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccgtgatgcc 1144 Query: 384 gttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaa 443 ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 1143 gtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagttaaagaa 1084 Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 |||||||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||| Sbjct: 1083 atggtcgtagaagatgcatggggtgcctgggtgggtgaggatgtatgcgtagccttgcat 1024 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1023 gaccttgtcggaggggaatggccacatggcctgcgtggagcccgtgtcgtggttgtcgac 964 Query: 564 gaaggtgacggccttggccggccaccatcccatcacgccgggggccttcccctgcgggtc 623 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 963 gaaggtgacggccttggctggccaccaccccatcacgccgggggccttcccctgcgggtc 904 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 8 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaatt 55 ||||||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1513 cctcttcatatcctcagtaatttatttactccagtcgtgtgagcaatt 1466
>emb|Y11276.1|HVAA24AMY H.vulgare mRNA for alpha-amylase, clone aa24 Length = 1507 Score = 601 bits (303), Expect = e-168 Identities = 414/451 (91%) Strand = Plus / Minus Query: 176 ttcagctccgttgtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgc 235 ||||||||||||||||||| ||||| ||| || |||||||||||||||||||||| |||| Sbjct: 1344 ttcagctccgttgtagtgtggccgccgcagcgatcttctcccagacggcgtagtccttgc 1285 Query: 236 cgtgtgccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccga 295 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1284 cgtgcgccgaggtcacgaacccggccgggatcacagccccgacgtcgtacctggacccga 1225 Query: 296 tcttcaccaccaccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgagga 355 |||||||||||||||||| ||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 1224 tcttcaccaccaccttgctgtcgatctctgcgacatatgcgtctccgtcgtgcatgagga 1165 Query: 356 tcttcagagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcga 415 |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1164 tcttcagagcactcgtcgccgtgatgccgttgcgcttcctgatcgccacaagcgctgcga 1105 Query: 416 tctggtccttaaacccccagttgaagaaatggtcgtagaagatgcatgggatgccggggt 475 ||| |||||| || ||| |||||| ||||||||||||||||||||||||||||| | | Sbjct: 1104 tctcgtccttgaaacccaggttgaaaaaatggtcgtagaagatgcatgggatgccagaat 1045 Query: 476 gggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatggcct 535 |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 1044 gggtgaggatgtacgcgtagccctgcatgatcttgtcggaggggaatggccacttggcct 985 Query: 536 gcgtggagcctgtatcgtggttgtcgacgaaggtgacggccttggccggccaccatccca 595 |||||||||| || ||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 984 gcgtggagccggtgtcgtggttgtcgatgaaggtgacagccttggccggccaccacccca 925 Query: 596 tcacgccgggggccttcccctgcgggtcgat 626 | || |||||||| || |||||||||||||| Sbjct: 924 tgactccgggggctttgccctgcgggtcgat 894 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/60 (86%), Gaps = 3/60 (5%) Strand = Plus / Minus Query: 12 ttcgtatcctcagtactttatt---tactacagtcgtgtgagcaattcgtatagctcatc 68 |||||||||||| ||||||||| || |||| |||||||||| ||||||| |||||||| Sbjct: 1506 ttcgtatcctcaatactttatttagtagtacaatcgtgtgagccattcgtacagctcatc 1447
>dbj|AK101018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149I23, full insert sequence Length = 1712 Score = 355 bits (179), Expect = 1e-94 Identities = 308/351 (87%) Strand = Plus / Minus Query: 276 gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaggc 335 ||||||||| | ||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 1333 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 1274 Query: 336 atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 395 || | ||||||| | |||||| || | |||||||||||| | |||||| |||| ||| Sbjct: 1273 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 1214 Query: 396 gatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgtagaa 455 | ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| Sbjct: 1213 caccgccaccagcgccgcgatctgctcctttaacccccaatcgaagaaatggtcgtagaa 1154 Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1153 gatgcatgggttgccgggatgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 1094 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| || Sbjct: 1093 ggggaatggccacatctgttgcgtcgagccagtgtcgtggttgtcgacgaaggtgacagc 1034 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 ||| ||||||||||| || ||||| || || |||||||||||| ||||||| Sbjct: 1033 ctttgccggccaccacccgatcacccccggtgccttcccctgctggtcgat 983 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 211 ttctcccagacggcgtagtcgttgccgtg 239 |||||||||||||||||| |||||||||| Sbjct: 1398 ttctcccagacggcgtagccgttgccgtg 1370
>dbj|AK059671.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F08, full insert sequence Length = 1718 Score = 355 bits (179), Expect = 1e-94 Identities = 308/351 (87%) Strand = Plus / Minus Query: 276 gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaggc 335 ||||||||| | ||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 1332 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 1273 Query: 336 atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 395 || | ||||||| | |||||| || | |||||||||||| | |||||| |||| ||| Sbjct: 1272 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 1213 Query: 396 gatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgtagaa 455 | ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| Sbjct: 1212 caccgccaccagcgccgcgatctgctcctttaacccccaatcgaagaaatggtcgtagaa 1153 Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1152 gatgcatgggttgccgggatgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 1093 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| || Sbjct: 1092 ggggaatggccacatctgttgcgtcgagccagtgtcgtggttgtcgacgaaggtgacagc 1033 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 ||| ||||||||||| || ||||| || || |||||||||||| ||||||| Sbjct: 1032 ctttgccggccaccacccgatcacccccggtgccttcccctgctggtcgat 982 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 211 ttctcccagacggcgtagtcgttgccgtg 239 |||||||||||||||||| |||||||||| Sbjct: 1397 ttctcccagacggcgtagccgttgccgtg 1369
>emb|X64619.1|OSAMYC2M O.sativa Amyc2 mRNA for alpha-amylase Length = 1659 Score = 347 bits (175), Expect = 3e-92 Identities = 307/351 (87%) Strand = Plus / Minus Query: 276 gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaggc 335 ||||||||| | ||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 1304 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 1245 Query: 336 atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 395 || | ||||||| | |||||| || | |||||||||||| | |||||| |||| ||| Sbjct: 1244 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 1185 Query: 396 gatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgtagaa 455 | ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| Sbjct: 1184 caccgccaccagcgccgcgatctgctcctttaacccccaatcgaagaaatggtcgtagaa 1125 Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 1124 gatgcatgggttgccgggatgtgtgaggatgtaggcgtagccctgcatgaccttgtcgga 1065 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| || Sbjct: 1064 ggggaatggccacatctgttgcgtcgagccagtgtcgtggttgtcgacgaaggtgacagc 1005 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 ||| ||||||||||| || ||||| || || |||||||||||| ||||||| Sbjct: 1004 ctttgccggccaccacccgatcacccccggtgccttcccctgctggtcgat 954
>emb|X05166.1|HVMY32B Barley gene for type A alpha-amylase (Amy32b) Length = 2717 Score = 343 bits (173), Expect = 4e-91 Identities = 280/313 (89%), Gaps = 2/313 (0%) Strand = Plus / Minus Query: 144 catgctcgatcgaatgacggatcagtgcagacttcagctccgttgtagtgttgccgcggc 203 |||||||||| ||||| |||| |||| || |||||||||||||||||||| |||||||| Sbjct: 2484 catgctcgattgaatggtggatgagtggaggcttcagctccgttgtagtgtcgccgcggc 2425 Query: 204 accgttcttctcccagacggcgt-agtcgttgccgtgtgccgaggtcacgaacccggccg 262 | | | ||||||| | ||||||| |||| |||||||| ||||| || ||||||| |||| Sbjct: 2424 agc-tgcttctccgatacggcgttagtccttgccgtgcgccgacgttgcgaacccagccg 2366 Query: 263 ggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatct 322 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| Sbjct: 2365 ggatcaccgccccgacgtcgtacctggtcccgattttcaccaccaccttgccgtcgatct 2306 Query: 323 cggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgc 382 | ||||||||||| |||||||||||||||||||||| || || |||||||||||||||| Sbjct: 2305 ccgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccgtgatgc 2246 Query: 383 cgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 442 |||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 2245 cgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagttaaaga 2186 Query: 443 aatggtcgtagaa 455 ||||||||||||| Sbjct: 2185 aatggtcgtagaa 2173 Score = 238 bits (120), Expect = 2e-59 Identities = 156/168 (92%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2076 gatgcatggggtgcctgggtgggtgaggatgtatgcgtagccttgcatgaccttgtcgga 2017 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 2016 ggggaatggccacatgggctgcgtggagcccgtgtcgtggttgtcgacgaaggtgacggc 1957 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtc 623 |||||| |||||||| ||||||||| | |||| ||||||||||||||| Sbjct: 1956 cttggctggccaccaccccatcacgtccgggggcttcccctgcgggtc 1909 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 8 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaatt 55 ||||||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 2614 cctcttcatatcctcagtaatttatttactccagtcgtgtgagcaatt 2567
>gb|M15208.1|BLYAMYG Barley (type A) high pI isozyme of alpha-amylase gene, complete cds Length = 2717 Score = 343 bits (173), Expect = 4e-91 Identities = 280/313 (89%), Gaps = 2/313 (0%) Strand = Plus / Minus Query: 144 catgctcgatcgaatgacggatcagtgcagacttcagctccgttgtagtgttgccgcggc 203 |||||||||| ||||| |||| |||| || |||||||||||||||||||| |||||||| Sbjct: 2484 catgctcgattgaatggtggatgagtggaggcttcagctccgttgtagtgtcgccgcggc 2425 Query: 204 accgttcttctcccagacggcgt-agtcgttgccgtgtgccgaggtcacgaacccggccg 262 | | | ||||||| | ||||||| |||| |||||||| ||||| || ||||||| |||| Sbjct: 2424 agc-tgcttctccgatacggcgttagtccttgccgtgcgccgacgttgcgaacccagccg 2366 Query: 263 ggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatct 322 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| Sbjct: 2365 ggatcaccgccccgacgtcgtacctggtcccgattttcaccaccaccttgccgtcgatct 2306 Query: 323 cggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgc 382 | ||||||||||| |||||||||||||||||||||| || || |||||||||||||||| Sbjct: 2305 ccgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccgtgatgc 2246 Query: 383 cgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 442 |||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 2245 cgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagttaaaga 2186 Query: 443 aatggtcgtagaa 455 ||||||||||||| Sbjct: 2185 aatggtcgtagaa 2173 Score = 238 bits (120), Expect = 2e-59 Identities = 156/168 (92%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2076 gatgcatggggtgcctgggtgggtgaggatgtatgcgtagccttgcatgaccttgtcgga 2017 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 2016 ggggaatggccacatgggctgcgtggagcccgtgtcgtggttgtcgacgaaggtgacggc 1957 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtc 623 |||||| |||||||| ||||||||| | |||| ||||||||||||||| Sbjct: 1956 cttggctggccaccaccccatcacgtccgggggcttcccctgcgggtc 1909 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 8 cctcttcgtatcctcagtactttatttactacagtcgtgtgagcaatt 55 ||||||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 2614 cctcttcatatcctcagtaatttatttactccagtcgtgtgagcaatt 2567
>gb|DQ018998.1| Hordeum vulgare haplotype A alpha-amylase (Amy32b) gene, partial cds Length = 619 Score = 333 bits (168), Expect = 4e-88 Identities = 237/260 (91%) Strand = Plus / Minus Query: 196 gccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtgccgaggtcacgaac 255 ||||||||| || |||||||||| ||||||||||| |||||||| ||||| || ||||| Sbjct: 618 gccgcggcagcggtcttctcccatacggcgtagtccttgccgtgcgccgacgttgcgaac 559 Query: 256 ccggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccg 315 || |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| Sbjct: 558 ccagccgggatcaccgccccgacgtcgtatctggtcccgattttcaccaccaccttgccg 499 Query: 316 tctatctcggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgctcgtcgcc 375 || ||||| ||||||||||| ||||||||||||||||||||||| || || ||||||||| Sbjct: 498 tcgatctccgcgacgtaggcgtctccttcgtgcatgaggatcttgagcgcactcgtcgcc 439 Query: 376 gtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccag 435 ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 438 gtgatgccgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccag 379 Query: 436 ttgaagaaatggtcgtagaa 455 || ||||||||||||||||| Sbjct: 378 ttaaagaaatggtcgtagaa 359 Score = 270 bits (136), Expect = 5e-69 Identities = 160/168 (95%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 262 gatgcatggggtgcctgggtgggtgaggatgtatgcgtagccttgcatgaccttgtcgga 203 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 202 ggggaatggccacatggcctgcgtggagcccgtgtcgtggttgtcgacgaaggtgacggc 143 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtc 623 |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 142 cttggctggccaccaccccatcacgccgggggccttcccctgcgggtc 95
>gb|M17127.1|BLYAMY2A Barley (H.vulgare) alpha-amylase 2 gene, complete cds Length = 2337 Score = 325 bits (164), Expect = 1e-85 Identities = 251/280 (89%) Strand = Plus / Minus Query: 176 ttcagctccgttgtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgc 235 ||||||||||||||||||||| | ||| || |||||||||||||||||||||| |||| Sbjct: 2044 ttcagctccgttgtagtgttggtcccgcagcgatcttctcccagacggcgtagtccttgc 1985 Query: 236 cgtgtgccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccga 295 ||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||| Sbjct: 1984 cgttcgccgaggtcacgaaccgggccgggatcacagccccgagctcgtacctggacccga 1925 Query: 296 tcttcaccaccaccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgagga 355 |||||||||||||||||| ||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 1924 tcttcaccaccaccttgctgtcgatctctgcgacatatgcgtctccgtcgtgcatgagga 1865 Query: 356 tcttcagagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcga 415 |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1864 tcttcagagcactcgtcgccgtgatgccgttgcgcttcctgatcgccacaagcgctgcga 1805 Query: 416 tctggtccttaaacccccagttgaagaaatggtcgtagaa 455 ||| |||||| || ||| |||||| |||||||||||||| Sbjct: 1804 tctcgtccttgaaacccaggttgaaaaaatggtcgtagaa 1765 Score = 153 bits (77), Expect = 8e-34 Identities = 137/155 (88%), Gaps = 4/155 (2%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1672 gatgcatgggatgccagaatgggtgaggatgtacgcgtagccctgcatgatcttgtcgga 1613 Query: 516 ggggaatggccacatggcctgc--gtggagcctgtatcgtggttgtcgacgaaggtgacg 573 ||||| ||||||| || |||| ||||||| || ||||||||||||| ||||||||| Sbjct: 1612 ggggactggccacttg--ctgccgttggagccggtgtcgtggttgtcgatgaaggtgaca 1555 Query: 574 gccttggccggccaccatcccatcacgccgggggc 608 ||||||||||||||||| ||||| || |||||||| Sbjct: 1554 gccttggccggccaccaccccatgactccgggggc 1520 Score = 60.0 bits (30), Expect = 9e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 8 cctcttcgtatcctcagtactttatt---tactacagtcgtgtgagcaattcgtatagct 64 |||||||||||||||| ||||||||| || |||| |||||||||| ||||||| |||| Sbjct: 2210 cctcttcgtatcctcaatactttatttagtagtacaatcgtgtgagccattcgtacagct 2151 Query: 65 catc 68 |||| Sbjct: 2150 catc 2147
>gb|DQ018997.1| Hordeum vulgare haplotype G alpha-amylase (Amy32b) gene, partial cds Length = 616 Score = 323 bits (163), Expect = 4e-85 Identities = 235/259 (90%) Strand = Plus / Minus Query: 197 ccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtgccgaggtcacgaacc 256 |||||||| || |||||||||| ||||||||||| |||||||| ||||| || |||||| Sbjct: 616 ccgcggcagcggtcttctcccatacggcgtagtccttgccgtgcgccgacgttgcgaacc 557 Query: 257 cggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgt 316 | |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 556 cagccgggatcaccgccccgacgtcgtatctggtcccgattttcaccaccaccttgccgt 497 Query: 317 ctatctcggcgacgtaggcatctccttcgtgcatgaggatcttcagagcgctcgtcgccg 376 | ||||| ||||||||||| |||||||||||||||||||||| || || |||||||||| Sbjct: 496 cgatctccgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccg 437 Query: 377 tgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagt 436 |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 436 tgatgccgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagt 377 Query: 437 tgaagaaatggtcgtagaa 455 | ||||||||||||||||| Sbjct: 376 taaagaaatggtcgtagaa 358 Score = 270 bits (136), Expect = 5e-69 Identities = 160/168 (95%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 261 gatgcatggggtgcctgggtgggtgaggatgtatgcgtagccttgcatgaccttgtcgga 202 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 201 ggggaatggccacatggcctgcgtggagcccgtgtcgtggttgtcgacgaaggtgacggc 142 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtc 623 |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 141 cttggctggccaccaccccatcacgccgggggccttcccctgcgggtc 94
>emb|AJ010728.1|AFA010728 Avena fatua alpha-Amy2A gene, exons 1-4 Length = 3694 Score = 299 bits (151), Expect = 6e-78 Identities = 217/239 (90%) Strand = Plus / Minus Query: 214 tcccagacggcgtagtcgttgccgtgtgccgaggtcacgaacccggccgggatcaccgcc 273 |||||||||||||||||| |||||||||| ||||| |||||||| |||||||| || | | Sbjct: 3161 tcccagacggcgtagtcgctgccgtgtgcagaggtgacgaacccagccgggatgacggac 3102 Query: 274 ccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtag 333 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3101 ccgacgtcgtacctggagccgatcttcaccaccaccttgccgtcgatctcggcgacgtag 3042 Query: 334 gcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttc 393 || || || ||||||||||||||||| || |||||||||| |||||||||||||||||| Sbjct: 3041 gcgtcgccgtcgtgcatgaggatcttgagctcgctcgtcgctgtgatgccgttgcgcttc 2982 Query: 394 ctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgta 452 || | |||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct: 2981 ctcaccgccaccagcgccgcgatctcttccttgaatccccagttgaagaaatggtcgta 2923 Score = 268 bits (135), Expect = 2e-68 Identities = 162/171 (94%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2793 gatgcatggcgtgccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 2734 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 2733 ggggaagggccacatggcctgcgtggagccggtgtcgtggttgtcgacgaaggtgacggc 2674 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 |||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 2673 cttggcgggccaccaccccatcacgccgggggctttcccctgcgggtcgat 2623 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 150 cgatcgaatgacggatcagtgcagacttcagctccgttgtagtgttgccg 199 ||||| |||| ||||||||| || ||||||||||| || |||||||||| Sbjct: 3216 cgatccaatggcggatcagtcgaggcttcagctccgctgcagtgttgccg 3167
>emb|AJ010729.1|AFA010729 Avena fatua alpha-Amy2D gene, exons 1-4 Length = 2701 Score = 297 bits (150), Expect = 2e-77 Identities = 222/246 (90%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtgtgccgaggtcacgaacccggccgggatcac 269 |||||||||||||||||||||| |||||||||| ||| |||||||||| || |||||||| Sbjct: 2141 cttctcccagacggcgtagtcgctgccgtgtgcggagttcacgaacccagctgggatcac 2082 Query: 270 cgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgac 329 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2081 gtccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtcaatctcggcaac 2022 Query: 330 gtaggcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcg 389 ||||| || || ||||||||||||||||| || ||||||||| |||||||| |||||| Sbjct: 2021 ataggcgtcgccgtcgtgcatgaggatcttgagctcgctcgtcgacgtgatgctgttgcg 1962 Query: 390 cttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtc 449 |||||| | |||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 1961 cttcctcaccgccaccagcgccgcgatctcctccttgaatccccagttgaagaaatggtc 1902 Query: 450 gtagaa 455 |||||| Sbjct: 1901 gtagaa 1896 Score = 212 bits (107), Expect = 1e-51 Identities = 155/171 (90%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1780 gatgcaaggggtgccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 1721 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| |||||||||||||| || ||||| || |||||||||||||||||||||||||| Sbjct: 1720 cgggaagggccacatggcctgggttgagccagtgtcgtggttgtcgacgaaggtgacggc 1661 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 |||||| |||||||| || ||||| || || ||||||||||||| |||||| Sbjct: 1660 cttggcaggccaccagccgatcactcctggagccttcccctgcgagtcgat 1610 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 20 ctcagtactttatttactacagtcgtgtgagcaattcgtatagctcat 67 ||||||| ||||||||||||||| |||||| |||||||| ||||||| Sbjct: 2312 ctcagtaatttatttactacagtagtgtgaacaattcgttgagctcat 2265
>ref|XM_467957.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1561 Score = 210 bits (106), Expect = 4e-51 Identities = 157/174 (90%) Strand = Plus / Minus Query: 438 gaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagcc 497 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 1102 gaagaaatggtcgtagaagatgcatgggttgccggggtgggtgaggatgtatgcgtagcc 1043 Query: 498 ctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggtt 557 |||||||||||||||||||||||| ||||||| | |||||| ||||| || |||||||| Sbjct: 1042 ctgcatgaccttgtcggaggggaacggccacaggtgctgcgtcgagccggtgtcgtggtt 983 Query: 558 gtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||||||||||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 982 gtcgacgaaggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 929
>dbj|AK101744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061O03, full insert sequence Length = 1561 Score = 210 bits (106), Expect = 4e-51 Identities = 157/174 (90%) Strand = Plus / Minus Query: 438 gaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagcc 497 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 1102 gaagaaatggtcgtagaagatgcatgggttgccggggtgggtgaggatgtatgcgtagcc 1043 Query: 498 ctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggtt 557 |||||||||||||||||||||||| ||||||| | |||||| ||||| || |||||||| Sbjct: 1042 ctgcatgaccttgtcggaggggaacggccacaggtgctgcgtcgagccggtgtcgtggtt 983 Query: 558 gtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||||||||||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 982 gtcgacgaaggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 929
>gb|M24286.1|RICAAMYA Rice alpha-amylase mRNA, complete cds, clone pOS103 Length = 1553 Score = 210 bits (106), Expect = 4e-51 Identities = 157/174 (90%) Strand = Plus / Minus Query: 438 gaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagcc 497 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 1104 gaagaaatggtcgtagaagatgcatgggttgccggggtgggtgaggatgtatgcgtagcc 1045 Query: 498 ctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggtt 557 |||||||||||||||||||||||| ||||||| | |||||| ||||| || |||||||| Sbjct: 1044 ctgcatgaccttgtcggaggggaacggccacaggtgctgcgtcgagccggtgtcgtggtt 985 Query: 558 gtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||||||||||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 984 gtcgacgaaggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 931
>ref|XM_467955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 202 bits (102), Expect = 1e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtac 489 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1061 ccccagtcgaagaaatggtcgtagaagatgcatgggttgccggggtgggtgaggatgtag 1002 Query: 490 gcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgta 549 |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| || Sbjct: 1001 gcgtagccctgcatgaccttgtcggaggggaacggccacatgtgctgcgtcgagccggtg 942 Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcc 609 || |||||||||| |||||| ||||| ||||||||||| || |||| |||||| ||| Sbjct: 941 tcatggttgtcgatgaaggtcgtcgccttagccggccaccacccgatcatgccgggcgcc 882 Query: 610 tt 611 || Sbjct: 881 tt 880
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 196 bits (99), Expect = 6e-47 Identities = 153/171 (89%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 29749831 gatgcatgggttgccgggatgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 29749772 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| || Sbjct: 29749771 ggggaatggccacatctgttgcgtcgagccagtgtcgtggttgtcgacgaaggtgacagc 29749712 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 ||| ||||||||||| || ||||| || || |||||||||||| ||||||| Sbjct: 29749711 ctttgccggccaccacccgatcacccccggtgccttcccctgctggtcgat 29749661 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Minus Query: 276 gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaggc 335 ||||||||| | ||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 29750554 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 29750495 Query: 336 atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 395 || | ||||||| | |||||| || | |||||||||||| | |||||| |||| ||| Sbjct: 29750494 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 29750435 Query: 396 gatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgtagaa 455 | ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| Sbjct: 29750434 caccgccaccagcgccgcgatctgctcctttaacccccaatcgaagaaatggtcgtagaa 29750375 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 211 ttctcccagacggcgtagtcgttgccgtg 239 |||||||||||||||||| |||||||||| Sbjct: 29750619 ttctcccagacggcgtagccgttgccgtg 29750591
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 196 bits (99), Expect = 6e-47 Identities = 153/171 (89%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 47961 gatgcatgggttgccgggatgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 47902 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| || Sbjct: 47901 ggggaatggccacatctgttgcgtcgagccagtgtcgtggttgtcgacgaaggtgacagc 47842 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 ||| ||||||||||| || ||||| || || |||||||||||| ||||||| Sbjct: 47841 ctttgccggccaccacccgatcacccccggtgccttcccctgctggtcgat 47791 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Minus Query: 276 gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaggc 335 ||||||||| | ||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 48684 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 48625 Query: 336 atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 395 || | ||||||| | |||||| || | |||||||||||| | |||||| |||| ||| Sbjct: 48624 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 48565 Query: 396 gatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgtagaa 455 | ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| Sbjct: 48564 caccgccaccagcgccgcgatctgctcctttaacccccaatcgaagaaatggtcgtagaa 48505 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 211 ttctcccagacggcgtagtcgttgccgtg 239 |||||||||||||||||| |||||||||| Sbjct: 48749 ttctcccagacggcgtagccgttgccgtg 48721
>gb|M74177.1|RICAMY2A Oryza sativa japonica alpha-amylase (amy2A) gene, complete cds Length = 4128 Score = 196 bits (99), Expect = 6e-47 Identities = 153/171 (89%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 3199 gatgcatgggttgccgggatgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 3140 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| || Sbjct: 3139 ggggaatggccacatctgttgcgtcgagccagtgtcgtggttgtcgacgaaggtgacagc 3080 Query: 576 cttggccggccaccatcccatcacgccgggggccttcccctgcgggtcgat 626 ||| ||||||||||| || ||||| || || |||||||||||| ||||||| Sbjct: 3079 ctttgccggccaccacccgatcacccccggtgccttcccctgctggtcgat 3029 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Minus Query: 276 gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaggc 335 ||||||||| | ||| |||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 3923 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 3864 Query: 336 atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 395 || | ||||||| | |||||| || | |||||||||||| | |||||| |||| ||| Sbjct: 3863 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 3804 Query: 396 gatcgccaccagcgccgcgatctggtccttaaacccccagttgaagaaatggtcgtagaa 455 | ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||| Sbjct: 3803 caccgccaccagcgccgcgatctgctcctttaacccccaatcgaagaaatggtcgtagaa 3744 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 211 ttctcccagacggcgtagtcgttgccgtg 239 |||||||||||||||||| |||||||||| Sbjct: 3988 ttctcccagacggcgtagccgttgccgtg 3960
>emb|X16509.1|OSALAM Rice alpha-amylase gene Length = 4276 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3619 gatgcatgggttgccggggtgggtgaggatgtatgcgtagccctgcatgaccttgtcgga 3560 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||| | |||||| ||||| || |||||||||||||||||||| || Sbjct: 3559 ggggaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacgaaggtcgtcgc 3500 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| |||||| ||||| Sbjct: 3499 cttggccggccaccacccgatcatgccgggcgcctt 3464
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 32267383 gatgcatgggttgccggggtgggtgaggatgtatgcgtagccctgcatgaccttgtcgga 32267442 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||| | |||||| ||||| || |||||||||||||||||||| || Sbjct: 32267443 ggggaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacgaaggtcgtcgc 32267502 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| |||||| ||||| Sbjct: 32267503 cttggccggccaccacccgatcatgccgggcgcctt 32267538 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 32262928 gatgcatgggttgccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 32262869 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||||| |||||| ||||| || || |||||||||| |||||| || Sbjct: 32262868 ggggaacggccacatgtgctgcgtcgagccggtgtcatggttgtcgatgaaggtcgtcgc 32262809 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||| ||||||||||| || |||| |||||| ||||| Sbjct: 32262808 cttagccggccaccacccgatcatgccgggcgcctt 32262773 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 32263045 ccccagtcgaagaaatggtcgtagaa 32263020
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 111396 gatgcatgggttgccggggtgggtgaggatgtatgcgtagccctgcatgaccttgtcgga 111455 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||| | |||||| ||||| || |||||||||||||||||||| || Sbjct: 111456 ggggaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacgaaggtcgtcgc 111515 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| |||||| ||||| Sbjct: 111516 cttggccggccaccacccgatcatgccgggcgcctt 111551 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106941 gatgcatgggttgccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 106882 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||||| |||||| ||||| || || |||||||||| |||||| || Sbjct: 106881 ggggaacggccacatgtgctgcgtcgagccggtgtcatggttgtcgatgaaggtcgtcgc 106822 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||| ||||||||||| || |||| |||||| ||||| Sbjct: 106821 cttagccggccaccacccgatcatgccgggcgcctt 106786 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 107058 ccccagtcgaagaaatggtcgtagaa 107033
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 43215 gatgcatgggttgccggggtgggtgaggatgtatgcgtagccctgcatgaccttgtcgga 43274 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||| | |||||| ||||| || |||||||||||||||||||| || Sbjct: 43275 ggggaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacgaaggtcgtcgc 43334 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| |||||| ||||| Sbjct: 43335 cttggccggccaccacccgatcatgccgggcgcctt 43370 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 38760 gatgcatgggttgccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 38701 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||||||| |||||| ||||| || || |||||||||| |||||| || Sbjct: 38700 ggggaacggccacatgtgctgcgtcgagccggtgtcatggttgtcgatgaaggtcgtcgc 38641 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||| ||||||||||| || |||| |||||| ||||| Sbjct: 38640 cttagccggccaccacccgatcatgccgggcgcctt 38605 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 38877 ccccagtcgaagaaatggtcgtagaa 38852
>ref|XM_482917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1732 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1133 tggtcgtagaagatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatg 1074 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 ||||||||||||||||| ||||| | |||||| ||||| || ||||||||||||||| Sbjct: 1073 accttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacg 1014 Query: 565 aaggtgacggcctt 578 || ||||||||||| Sbjct: 1013 aacgtgacggcctt 1000 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 1301 acgtcgtacctcgtcccgatcttcacca 1274
>ref|XM_507267.1| PREDICTED Oryza sativa (japonica cultivar-group), P0013B04.36 mRNA Length = 1774 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1201 tggtcgtagaagatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatg 1142 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 ||||||||||||||||| ||||| | |||||| ||||| || ||||||||||||||| Sbjct: 1141 accttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacg 1082 Query: 565 aaggtgacggcctt 578 || ||||||||||| Sbjct: 1081 aacgtgacggcctt 1068 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 1369 acgtcgtacctcgtcccgatcttcacca 1342
>ref|XM_507590.1| PREDICTED Oryza sativa (japonica cultivar-group), P0013B04.34 mRNA Length = 1681 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1169 atggtcgtagaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 1110 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||||| Sbjct: 1109 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgac 1050 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 1049 gaaggttacggcct 1036 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1403 cttctcccagacgcagtagtcgttgccgtg 1374
>ref|XM_507266.2| PREDICTED Oryza sativa (japonica cultivar-group), P0013B04.34 mRNA Length = 1716 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1170 atggtcgtagaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 1111 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||||| Sbjct: 1110 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgac 1051 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 1050 gaaggttacggcct 1037 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1404 cttctcccagacgcagtagtcgttgccgtg 1375
>ref|XM_482916.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1678 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1173 atggtcgtagaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 1114 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||||| Sbjct: 1113 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgac 1054 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 1053 gaaggttacggcct 1040 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1407 cttctcccagacgcagtagtcgttgccgtg 1378
>dbj|AK119761.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-G03, full insert sequence Length = 1732 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1133 tggtcgtagaagatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatg 1074 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 ||||||||||||||||| ||||| | |||||| ||||| || ||||||||||||||| Sbjct: 1073 accttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacg 1014 Query: 565 aaggtgacggcctt 578 || ||||||||||| Sbjct: 1013 aacgtgacggcctt 1000 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 1301 acgtcgtacctcgtcccgatcttcacca 1274
>dbj|AK106526.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D12, full insert sequence Length = 1681 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1169 atggtcgtagaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 1110 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||||| Sbjct: 1109 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgac 1050 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 1049 gaaggttacggcct 1036 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1403 cttctcccagacgcagtagtcgttgccgtg 1374
>dbj|AK103413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128G11, full insert sequence Length = 1678 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1173 atggtcgtagaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 1114 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||||| Sbjct: 1113 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgac 1054 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 1053 gaaggttacggcct 1040 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1407 cttctcccagacgcagtagtcgttgccgtg 1378
>dbj|AK073487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J03, full insert sequence Length = 1774 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1201 tggtcgtagaagatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatg 1142 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 ||||||||||||||||| ||||| | |||||| ||||| || ||||||||||||||| Sbjct: 1141 accttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacg 1082 Query: 565 aaggtgacggcctt 578 || ||||||||||| Sbjct: 1081 aacgtgacggcctt 1068 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 1369 acgtcgtacctcgtcccgatcttcacca 1342
>dbj|AK064071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G11, full insert sequence Length = 1466 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 955 atggtcgtagaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 896 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||||| Sbjct: 895 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgac 836 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 835 gaaggttacggcct 822 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1189 cttctcccagacgcagtagtcgttgccgtg 1160
>gb|L25805.1|MZEALAM Zea mays alpha-amylase mRNA, complete cds Length = 1627 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 |||||||||||||||||||| | || ||||| |||||||| || ||||||||||||||| Sbjct: 1094 tggtcgtagaagatgcatggagttcctgggtgcgtgaggatataggcgtagccctgcatg 1035 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 |||||||||||||||||||||||| | |||||||||||| || ||||||||||||||| Sbjct: 1034 accttgtcggaggggaatggccacgagttctgcgtggagccggtgtcgtggttgtcgacg 975 Query: 565 aaggtgacggcctt 578 || ||||||||||| Sbjct: 974 aacgtgacggcctt 961 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 273 cccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgta 332 |||||||||||||| |||||||||||||| | |||||| |||| |||| ||||||||| Sbjct: 1266 cccgacgtcgtaccgtgacccgatcttcacgatgaccttgtcgtcaatcttggcgacgta 1207 Query: 333 g 333 | Sbjct: 1206 g 1206
>gb|M24287.1|RICAAMYB Rice alpha-amylase mRNA, complete cds, clone pOS137 Length = 1682 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1111 tggtcgtagaagatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatg 1052 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 ||||||||||||||||| ||||| | |||||| ||||| || ||||||||||||||| Sbjct: 1051 accttgtcggaggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacg 992 Query: 565 aaggtgacggcctt 578 || ||||||||||| Sbjct: 991 aacgtgacggcctt 978 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 1279 acgtcgtacctcgtcccgatcttcacca 1252
>dbj|AK099392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075P18, full insert sequence Length = 1582 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 |||||||||||||||||||| | || ||||||||||||||||| ||||||||| | ||| Sbjct: 1189 tggtcgtagaagatgcatggtactcctgggtgggtgaggatgtaggcgtagcccagaatg 1130 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 |||||||| || |||||||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 1129 accttgtcagacgggaatggccacatccgctgcgtcgagccggtgtcgtggttgtcgacg 1070 Query: 565 aaggtgacggcctt 578 |||||||||||||| Sbjct: 1069 aaggtgacggcctt 1056
>dbj|AK099330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011L07, full insert sequence Length = 1586 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 |||||||||||||||||||| | || ||||||||||||||||| ||||||||| | ||| Sbjct: 1193 tggtcgtagaagatgcatggtactcctgggtgggtgaggatgtaggcgtagcccagaatg 1134 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 |||||||| || |||||||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 1133 accttgtcagacgggaatggccacatccgctgcgtcgagccggtgtcgtggttgtcgacg 1074 Query: 565 aaggtgacggcctt 578 |||||||||||||| Sbjct: 1073 aaggtgacggcctt 1060
>dbj|AK063988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D12, full insert sequence Length = 1636 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 |||||||||||||||||||| | || ||||||||||||||||| ||||||||| | ||| Sbjct: 1192 tggtcgtagaagatgcatggtactcctgggtgggtgaggatgtaggcgtagcccagaatg 1133 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 |||||||| || |||||||||||||| |||||| ||||| || ||||||||||||||| Sbjct: 1132 accttgtcagacgggaatggccacatccgctgcgtcgagccggtgtcgtggttgtcgacg 1073 Query: 565 aaggtgacggcctt 578 |||||||||||||| Sbjct: 1072 aaggtgacggcctt 1059
>gb|M17126.1|BLYAMY1 Barley (H.vulgare) alpha-amylase 1 mRNA, complete cds Length = 1461 Score = 147 bits (74), Expect = 5e-32 Identities = 155/182 (85%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtac 489 ||||||| ||||||||| ||||||||||||||||| | || ||||| ||||||||||| Sbjct: 1107 ccccagtcgaagaaatgatcgtagaagatgcatggcgtccctgggtgcgtgaggatgtag 1048 Query: 490 gcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgta 549 || || |||||||||||| |||| || ||||| ||||||||| |||||||||||| || Sbjct: 1047 gcatatccctgcatgaccctgtcagaagggaagggccacatgtgctgcgtggagccggtg 988 Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcc 609 ||||||||||| || ||||| || ||||||||||||||||| || |||| ||| || ||| Sbjct: 987 tcgtggttgtccacaaaggtcaccgccttggccggccaccacccgatcatgcctggcgcc 928 Query: 610 tt 611 || Sbjct: 927 tt 926
>gb|AY090767.1| Eleusine coracana subsp. coracana alpha-amylase (AmyF1) mRNA, partial cds Length = 1209 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Minus Query: 415 atctggtccttaaacccccagttgaagaaatggtcgtagaagatgcatgggatgccgggg 474 |||| |||||| || ||||||| ||||||||| || ||||||||||||||| | || || Sbjct: 1001 atctcgtccttcaagccccagtcgaagaaatgatcatagaagatgcatgggtttcctgga 942 Query: 475 tgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatggcc 534 || || |||||||| |||||||||||||||||||||| || ||||| ||||||||| Sbjct: 941 tgcgtcaggatgtaggcgtagccctgcatgaccttgttggccgggaagggccacatgtgt 882 Query: 535 tgcgtggagcctgtatcgtggttgtcgacgaaggtgacggccttggccggccaccatccc 594 ||||| ||||| || ||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 881 tgcgtcgagccggtgtcgtggttgtcaatgaaggtcacggccttggccggccaccaccca 822 Query: 595 atcacgccgggggcctt 611 |||| ||| || ||||| Sbjct: 821 atcatgcccggcgcctt 805
>gb|J04202.1|BLYAMY46 Barley alpha-amylase type B (Amy46) gene, complete cds Length = 2159 Score = 143 bits (72), Expect = 8e-31 Identities = 135/156 (86%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| | || ||||| ||||||||||| || || |||||||||||| ||||||| Sbjct: 1600 gatgcatggggtccctgggtgcgtgaggatgtaggcatatccctgcatgaccctgtcgga 1541 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||||||| |||||||||||| || |||||||||||||||||||| || || Sbjct: 1540 agggaagggccacatgtgctgcgtggagccggtgtcgtggttgtcgacgaaggtcaccgc 1481 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| ||| || ||||| Sbjct: 1480 cttggccggccaccacccgatcatgcccggcgcctt 1445
>dbj|AK064300.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A12, full insert sequence Length = 1716 Score = 139 bits (70), Expect = 1e-29 Identities = 118/134 (88%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 |||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1170 atggtcgtggaagatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcat 1111 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||| ||||| ||||| | | ||| || ||||| || |||||||||||| | Sbjct: 1110 gaccttgtcggaagggaacggccagagcgactgggtcgagccggtgtcgtggttgtcggc 1051 Query: 564 gaaggtgacggcct 577 |||||| ||||||| Sbjct: 1050 gaaggttacggcct 1037 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 1404 cttctcccagacgcagtagtcgttgccgtg 1375
>gb|K02638.1|BLYAMYABE Barley alpha-amylase type B isozyme mRNA, complete cds, clone pHV19 Length = 1119 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtac 489 ||||||| ||||||||| ||||||||||||||||| | || ||||| ||||||||||| Sbjct: 1073 ccccagtcgaagaaatgatcgtagaagatgcatggcgtccctgggtgcgtgaggatgtag 1014 Query: 490 gcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgta 549 || || |||||||||||| |||| || ||||| ||||||||| |||||||||||| || Sbjct: 1013 gcatatccctgcatgaccctgtcagaagggaagggccacatgtgctgcgtggagccggtg 954 Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcc 609 ||||||||||| || ||||| || |||||||| |||||||| || |||| ||| || ||| Sbjct: 953 tcgtggttgtccacaaaggtcaccgccttggctggccaccacccgatcatgcctggcgcc 894 Query: 610 tt 611 || Sbjct: 893 tt 892
>gb|M10056.1|BLYAMYABA Barley alpha-amylase type B isozyme mRNA, clone 103 Length = 595 Score = 137 bits (69), Expect = 5e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtac 489 ||||||| ||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct: 236 ccccagtcgaagaaatggtcgtagaagatgcatggcgtccttgggtgcgtgaggatgtag 177 Query: 490 gcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgta 549 || || |||||||||||| |||| || ||||| ||||||||| |||||||||||| || Sbjct: 176 gcatatccctgcatgaccctgtcagaagggaagggccacatgtgctgcgtggagccggtg 117 Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccacca 590 ||||||||||| || ||||| || |||||||| |||||||| Sbjct: 116 tcgtggttgtccacaaaggtcaccgccttggctggccacca 76
>emb|X15227.1|HVAMY56 Barley Amy gene for alpha amylase (clone gRAmy56) (EC 3.2.1.1) Length = 2203 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| | || ||||| ||||||||||| || || |||||||||||| ||||||| Sbjct: 1643 gatgcatgggttccctgggtgcgtgaggatgtaggcatatccctgcatgaccctgtcgga 1584 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||||||| |||||||||||| || |||||||||||||| ||||| || || Sbjct: 1583 agggaagggccacatgtgctgcgtggagccggtgtcgtggttgtcgacaaaggtcaccgc 1524 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| ||| || ||||| Sbjct: 1523 cttggccggccaccacccgatcatgcccggcgcctt 1488
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 23335360 gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 23335301 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||| | |||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 23335300 ggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggc 23335241 Query: 576 ctt 578 ||| Sbjct: 23335240 ctt 23335238 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 23329227 gatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcatgaccttgtcgga 23329168 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||| | | ||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 23329167 agggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgacgaaggttacggc 23329108 Query: 576 ct 577 || Sbjct: 23329107 ct 23329106 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 23329558 cttctcccagacgcagtagtcgttgccgtg 23329529 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 23335627 acgtcgtacctcgtcccgatcttcacca 23335600
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 17197 gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 17138 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||| | |||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 17137 ggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggc 17078 Query: 576 ctt 578 ||| Sbjct: 17077 ctt 17075 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 11064 gatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcatgaccttgtcgga 11005 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||| | | ||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 11004 agggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgacgaaggttacggc 10945 Query: 576 ct 577 || Sbjct: 10944 ct 10943 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 11395 cttctcccagacgcagtagtcgttgccgtg 11366 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 17464 acgtcgtacctcgtcccgatcttcacca 17437
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 134711 gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 134652 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||| | |||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 134651 ggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggc 134592 Query: 576 ctt 578 ||| Sbjct: 134591 ctt 134589 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 128578 gatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcatgaccttgtcgga 128519 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||| | | ||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 128518 agggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgacgaaggttacggc 128459 Query: 576 ct 577 || Sbjct: 128458 ct 128457 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 128909 cttctcccagacgcagtagtcgttgccgtg 128880 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 134978 acgtcgtacctcgtcccgatcttcacca 134951
>dbj|AK119561.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B09, full insert sequence Length = 1760 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1121 gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 1062 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||| | |||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1061 ggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggc 1002 Query: 576 ctt 578 ||| Sbjct: 1001 ctt 999 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 1388 acgtcgtacctcgtcccgatcttcacca 1361
>dbj|AK064124.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D04, full insert sequence Length = 1667 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3 gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 62 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||| | |||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 63 ggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggc 122 Query: 576 ctt 578 ||| Sbjct: 123 ctt 125
>gb|M59351.1|RICAMY3D Rice alpha-amylase (RAmy3D) gene, complete cds, clone lambda-OSg1A Length = 2938 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2230 gatgcaggggactccggggtgggtgaggatgtaggcgtagccctgcatgaccttgtcgga 2171 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 |||||| ||||| | |||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 2170 ggggaacggccaaagcttctgcgtcgagccggtgtcgtggttgtcgacgaacgtgacggc 2111 Query: 576 ctt 578 ||| Sbjct: 2110 ctt 2108 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 acgtcgtacctggacccgatcttcacca 304 ||||||||||| | |||||||||||||| Sbjct: 2497 acgtcgtacctcgtcccgatcttcacca 2470
>gb|M59352.1|RICAMY3E Rice alpha-amylase (RAmy3E) gene, complete cds Length = 2683 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 1692 gatgcatgggatgccagggtgagtgaggatgtaggcgtagccctgcatgaccttgtcgga 1633 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||| | | ||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 1632 agggaacggccagagcgactgggtcgagccggtgtcgtggttgtcgacgaaggttacggc 1573 Query: 576 ct 577 || Sbjct: 1572 ct 1571 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 210 cttctcccagacggcgtagtcgttgccgtg 239 ||||||||||||| ||||||||||||||| Sbjct: 2023 cttctcccagacgcagtagtcgttgccgtg 1994
>gb|M17125.1|BLYAMY1A Barley (H.vulgare) alpha-amylase 1 gene, complete cds Length = 1992 Score = 127 bits (64), Expect = 5e-26 Identities = 133/156 (85%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 |||||||||| | || ||||| ||||||||||| || || |||||||||||| ||||||| Sbjct: 1433 gatgcatgggttccctgggtgcgtgaggatgtaggcatatccctgcatgaccctgtcgga 1374 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||| ||||||||| || ||||||||| | |||||||||||||||||||| || || Sbjct: 1373 agggaagggccacatgtgcttcgtggagccgttgtcgtggttgtcgacgaaggtcaccgc 1314 Query: 576 cttggccggccaccatcccatcacgccgggggcctt 611 ||||||||||||||| || |||| ||| || ||||| Sbjct: 1313 cttggccggccaccacccgatcatgcccggcgcctt 1278
>emb|X56336.1|OSRAMY3A O.sativa RAmy3A gene for alpha-amylase Length = 2625 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||||||||||||||| ||||||||| | ||||||||||| || |||||||||||||| Sbjct: 2009 gggtgggtgaggatgtaggcgtagcccagaatgaccttgtcagacgggaatggccacatc 1950 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 |||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 1949 cgctgcgtcgagccggtgtcgtggttgtcgacgaaggtgacggcctt 1903
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||||||||||||||| ||||||||| | ||||||||||| || |||||||||||||| Sbjct: 17236041 gggtgggtgaggatgtaggcgtagcccagaatgaccttgtcagacgggaatggccacatc 17235982 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 |||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 17235981 cgctgcgtcgagccggtgtcgtggttgtcgacgaaggtgacggcctt 17235935 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 17242637 gggtgtgtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccatgag 17242578 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || |||||||||| ||||||||||||||| Sbjct: 17242577 ttctgtgtggagccagtgtcatggttgtcgatgaaggtgacggcctt 17242531 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 17249835 gggtgtgtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccatgag 17249776 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || || ||||||| ||||||||| ||||| Sbjct: 17249775 ttctgtgtggagccagtgtcatgattgtcgatgaaggtgacagcctt 17249729
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||||||||||||||| ||||||||| | ||||||||||| || |||||||||||||| Sbjct: 22913 gggtgggtgaggatgtaggcgtagcccagaatgaccttgtcagacgggaatggccacatc 22854 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 |||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 22853 cgctgcgtcgagccggtgtcgtggttgtcgacgaaggtgacggcctt 22807 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 29509 gggtgtgtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccatgag 29450 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || |||||||||| ||||||||||||||| Sbjct: 29449 ttctgtgtggagccagtgtcatggttgtcgatgaaggtgacggcctt 29403 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 36707 gggtgtgtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccatgag 36648 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || || ||||||| ||||||||| ||||| Sbjct: 36647 ttctgtgtggagccagtgtcatgattgtcgatgaaggtgacagcctt 36601
>gb|K02635.1|BLYAMYABB Barley alpha-amylase type B isozyme mRNA, clone 168 Length = 512 Score = 123 bits (62), Expect = 7e-25 Identities = 152/182 (83%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtac 489 ||||||| ||||||||| ||||||||||||||||| | || |||| ||||||||||| Sbjct: 183 ccccagtcgaagaaatgatcgtagaagatgcatggcgtcccttggtgcgtgaggatgtag 124 Query: 490 gcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgta 549 || || |||||||||||| |||| || ||||| ||||||||| |||||||||||| || Sbjct: 123 gcatatccctgcatgaccctgtcagaagggaagggccacatgtgctgcgtggagccggtg 64 Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcc 609 |||||||||| || ||||| || |||||||| |||||||| || |||| ||| || ||| Sbjct: 63 tcgtggttgttcacaaaggtcaccgccttggctggccaccacccgatcatgcctggcgcc 4 Query: 610 tt 611 || Sbjct: 3 tt 2
>emb|X05809.1|TAMY3 Wheat alpha-amylase gene (alpha-Amy3) Length = 2397 Score = 117 bits (59), Expect = 5e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| || Sbjct: 2028 gatgcatggtatgcccgggtgtgtgaggatgtaggcgtagccctgcatgaccttgtccga 1969 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacgg 574 |||||||||||||| |||||| || || || ||||||||||||| ||| ||||||| Sbjct: 1968 ggggaatggccacagcctctgcgtcgacccagtgtcgtggttgtcgatgaacgtgacgg 1910
>gb|M16991.1|WHTAMYA Wheat alpha-amylase gene, complete cds Length = 2397 Score = 117 bits (59), Expect = 5e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| || Sbjct: 2028 gatgcatggtatgcccgggtgtgtgaggatgtaggcgtagccctgcatgaccttgtccga 1969 Query: 516 ggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacgg 574 |||||||||||||| |||||| || || || ||||||||||||| ||| ||||||| Sbjct: 1968 ggggaatggccacagcctctgcgtcgacccagtgtcgtggttgtcgatgaacgtgacgg 1910
>gb|M24941.1|RICAMYA O.sativa alpha-amylase (alpha-Amy3) gene, complete cds Length = 1317 Score = 117 bits (59), Expect = 5e-23 Identities = 116/135 (85%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 |||||||||||| ||||| || | || ||||| ||||||||||| |||||||||||||| Sbjct: 1044 atggtcgtagaaaatgcagggtactccagggtgtgtgaggatgtaggcgtagccctgcat 985 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||||||||| ||||| | ||| |||||||| || || |||||||||| Sbjct: 984 gaccttgtcggaggggaacggccatgagttctgtgtggagccagtgtcatggttgtcgat 925 Query: 564 gaaggtgacggcctt 578 ||||||||||||||| Sbjct: 924 gaaggtgacggcctt 910
>emb|X15226.1|HVAMY152 Barley Amy gene for alpha amylase (clone gRAmy152) (EC 3.2.1.1) Length = 2625 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| || || |||||||||||| |||| || ||||| ||||||||| Sbjct: 1789 gggtgcgtgaggatgtaggcatatccctgcatgaccctgtcagaagggaagggccacatg 1730 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggccttggccggccaccat 591 |||||||||||| || ||||||||||| || ||||| || ||||||||||||||||| Sbjct: 1729 tgctgcgtggagccggtgtcgtggttgtccacaaaggtcaccgccttggccggccaccac 1670 Query: 592 cccatcacgccgggggcctt 611 || |||| ||| || ||||| Sbjct: 1669 ccgatcatgcctggcgcctt 1650
>emb|X56337.1|OSRAMY3B O.sativa RAmy3B gene for alpha-amylase Length = 1996 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 1494 gggtgtgtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccatgag 1435 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || |||||||||| ||||||||||||||| Sbjct: 1434 ttctgtgtggagccagtgtcatggttgtcgatgaaggtgacggcctt 1388
>gb|M26770.1|WHTIVSS Wheat amylase gene, exons 2 and 3 (partial) Length = 310 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcgga 515 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| || Sbjct: 109 gatgcatggtatgcccgggtgtgtgaggatgtaggcgtagccctgcatgaccttgtccga 50 Query: 516 ggggaatggccaca 529 |||||||||||||| Sbjct: 49 ggggaatggccaca 36
>gb|AF287729.1|AF287729 Expression vector pFL746, complete sequence Length = 3524 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| || || |||||||||||| |||| || ||||| ||||||||| Sbjct: 2102 gggtgcgtgaggatgtaggcatatccctgcatgaccctgtcagaagggaagggccacatg 2043 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggccttggccggccaccat 591 |||||||||||| || ||||||||||| || ||||| || |||||||| |||||||| Sbjct: 2042 tgctgcgtggagccggtgtcgtggttgtccacaaaggtcaccgccttggctggccaccac 1983 Query: 592 cccatcacgccgggggcctt 611 || |||| ||| || ||||| Sbjct: 1982 ccgatcatgcctggcgcctt 1963
>gb|AY171068.1| Musa acuminata alpha-amylase precursor, gene, exons 1 through 4 and complete cds Length = 1492 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 490 gcgtagccctgcatgaccttgtcggaggggaatggccacatggcctgcgtggagcctgta 549 |||||||| ||||||||||| || || || || ||||||| ||||| ||||| ||| Sbjct: 1134 gcgtagccttgcatgaccttatcagaaggaaaaggccacaacctttgcgtcgagccggta 1075 Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcc 609 ||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||| ||| Sbjct: 1074 tcgtggttgtcgacgaaggtgacagccttctccggccaccaccccatcatgccgggtgcc 1015 Query: 610 ttcccctg 617 |||||||| Sbjct: 1014 ttcccctg 1007
>gb|K02637.1|BLYAMYABD Hordeum vulgare alpha-amylase type B isozyme (Amy6-4) gene, complete cds Length = 2910 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| || || |||||||||||| |||| || ||||| ||||||||| Sbjct: 2272 gggtgcgtgaggatgtaggcatatccctgcatgaccctgtcagaagggaagggccacatg 2213 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggccttggccggccaccat 591 |||||||||||| || ||||||||||| || ||||| || |||||||| |||||||| Sbjct: 2212 tgctgcgtggagccggtgtcgtggttgtccacaaaggtcaccgccttggctggccaccac 2153 Query: 592 cccatcacgccgggggcctt 611 || |||| ||| || ||||| Sbjct: 2152 ccgatcatgcctggcgcctt 2133
>dbj|AK101358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035C14, full insert sequence Length = 1433 Score = 101 bits (51), Expect = 3e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 444 atggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcat 503 |||||||||||| ||||| || | || ||||| ||||||||||| |||||||||||||| Sbjct: 1075 atggtcgtagaaaatgcagggtactccagggtgtgtgaggatgtaggcgtagccctgcat 1016 Query: 504 gaccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgac 563 |||||||||||||||||| ||||| | ||| |||||||| || || || ||||||| Sbjct: 1015 gaccttgtcggaggggaacggccatgagttctgtgtggagccagtgtcatgattgtcgat 956 Query: 564 gaaggtgacggcctt 578 ||||||||| ||||| Sbjct: 955 gaaggtgacagcctt 941
>dbj|AK112109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B07, full insert sequence Length = 1580 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 53 gggtgtgtgaggatgtaggcgtagccctgcatgaccttgtcggaggggaacggccatgag 112 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || || ||||||| ||||||||| ||||| Sbjct: 113 ttctgtgtggagccagtgtcatgattgtcgatgaaggtgacagcctt 159
>gb|AF533648.1| Musa acuminata alpha-amylase precursor, mRNA, complete cds Length = 1953 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 445 tggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccctgcatg 504 ||||||||||||||| | |||| || || || ||||| || || || ||||| |||||| Sbjct: 1569 tggtcgtagaagatggaagggactcccggatgcgtgagtatataagcatagccttgcatg 1510 Query: 505 accttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacg 564 ||||| || || || || ||||||| ||||| || || |||||||||||||||||| Sbjct: 1509 accttatcagaaggaaaaggccacaacttttgcgttgaaccggtatcgtggttgtcgacg 1450 Query: 565 aaggtgacggccttggccggccaccatcccatcacgccgggggccttcccctg 617 |||||||| ||||| | |||||||| ||||||| |||||| ||||||||||| Sbjct: 1449 aaggtgacagccttctctggccaccaccccatcatgccgggcgccttcccctg 1397
>emb|X56338.1|OSRAMY3C O.sativa RAmy3C gene for alpha-amylase Length = 2090 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 472 gggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaatggccacatg 531 ||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||| | Sbjct: 1404 gggtgtgtgaggatgtaggcgtagcgctgcatgaccttgtcggaggggaacggccatgag 1345 Query: 532 gcctgcgtggagcctgtatcgtggttgtcgacgaaggtgacggcctt 578 ||| |||||||| || || || ||||||| ||||||||| ||||| Sbjct: 1344 ttctgtgtggagccagtgtcatgattgtcgatgaaggtgacagcctt 1298
>emb|X52240.1|OSAMYC O.sativa OSamy-c gene for alpha-amylase Length = 2685 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/106 (85%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 506 ccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacga 565 ||||||||||||| || ||||||| | |||||| ||||| || |||||||||||||||| Sbjct: 1763 ccttgtcggagggaaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacga 1704 Query: 566 aggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||| | ||||||||||||||||| || |||| |||||| ||||| Sbjct: 1703 aggt--ccgccttggccggccaccacccgatcatgccgggcgcctt 1660 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgta 488 |||||||||| |||||||||||||||||||||| Sbjct: 1803 gatgcatgggttgccggggtgggtgaggatgta 1771 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 1917 ccccagtcgaagaaatggtcgtagaa 1892
>ref|NM_193986.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 506 ccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacga 565 ||||||||||||| || ||||||| | |||||| ||||| || |||||||||||||||| Sbjct: 620 ccttgtcggagggaaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacga 561 Query: 566 aggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 560 aggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 515 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgta 488 |||||||||| |||||||||||||||||||||| Sbjct: 660 gatgcatgggttgccggggtgggtgaggatgta 628
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 506 ccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacga 565 ||||||||||||| || ||||||| | |||||| ||||| || |||||||||||||||| Sbjct: 14444005 ccttgtcggagggaaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacga 14443946 Query: 566 aggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 14443945 aggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 14443900 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgta 488 |||||||||| |||||||||||||||||||||| Sbjct: 14444045 gatgcatgggttgccggggtgggtgaggatgta 14444013 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 14444159 ccccagtcgaagaaatggtcgtagaa 14444134
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 506 ccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacga 565 ||||||||||||| || ||||||| | |||||| ||||| || |||||||||||||||| Sbjct: 105402 ccttgtcggagggaaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacga 105343 Query: 566 aggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 105342 aggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 105297 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgta 488 |||||||||| |||||||||||||||||||||| Sbjct: 105442 gatgcatgggttgccggggtgggtgaggatgta 105410 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 105556 ccccagtcgaagaaatggtcgtagaa 105531
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 506 ccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacga 565 ||||||||||||| || ||||||| | |||||| ||||| || |||||||||||||||| Sbjct: 3318 ccttgtcggagggaaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacga 3259 Query: 566 aggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 3258 aggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 3213 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgta 488 |||||||||| |||||||||||||||||||||| Sbjct: 3358 gatgcatgggttgccggggtgggtgaggatgta 3326 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaa 455 ||||||| |||||||||||||||||| Sbjct: 3472 ccccagtcgaagaaatggtcgtagaa 3447
>dbj|AK105269.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E08, full insert sequence Length = 1685 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 506 ccttgtcggaggggaatggccacatggcctgcgtggagcctgtatcgtggttgtcgacga 565 ||||||||||||| || ||||||| | |||||| ||||| || |||||||||||||||| Sbjct: 1547 ccttgtcggagggaaacggccacaggtgctgcgtcgagccggtgtcgtggttgtcgacga 1488 Query: 566 aggtgacggccttggccggccaccatcccatcacgccgggggcctt 611 |||| ||||||||||||||||| || |||| |||||| ||||| Sbjct: 1487 aggtcgtcgccttggccggccaccacccgatcatgccgggcgcctt 1442 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 456 gatgcatgggatgccggggtgggtgaggatgta 488 |||||||||| |||||||||||||||||||||| Sbjct: 1587 gatgcatgggttgccggggtgggtgaggatgta 1555
>dbj|AK063489.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-C08, full insert sequence Length = 1397 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 430 ccccagttgaagaaatggtcgtagaagatgcatgggatgccgg 472 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 987 ccccagtcgaagaaatggtcgtagaagatgcatgggttgccgg 945 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 550 tcgtggttgtcgacgaaggtgacggccttggccggccaccatcccatcacgccgggggcc 609 |||||||||||||||||||| ||||||||||||||||| || |||| |||||| ||| Sbjct: 942 tcgtggttgtcgacgaaggtcgtcgccttggccggccaccacccgatcatgccgggcgcc 883 Query: 610 tt 611 || Sbjct: 882 tt 881
>dbj|AB198975.2| Hyacinthus orientalis HoAmy1A mRNA for alpha-amylase, complete cds Length = 1519 Score = 60.0 bits (30), Expect = 9e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 463 gggatgccggggtgggtgaggatgtacgcgtagccctgcatgaccttgtcggaggggaat 522 ||||| || ||||| ||||| || || || || ||||||||||| || || || |||||| Sbjct: 1155 gggattccagggtgtgtgagaatataagcatatccctgcatgactttatcagaagggaat 1096 Query: 523 ggccacatggcctgcgtggagcctgtatcgtggttgtcgacgaaggtgac 572 ||||||||| ||| || || || ||||| |||||||||||||| ||||| Sbjct: 1095 ggccacatgttctgtgtagaaccagtatcatggttgtcgacgaacgtgac 1046
>dbj|AB015131.1| Phaseolus vulgaris mRNA for alpha-amylase, complete cds Length = 1436 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 439 aagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccc 498 ||||||||||||||||| || | ||| |||| ||||| || || ||||| || || || Sbjct: 1040 aagaaatggtcgtagaatattgagggggtgccagggtgtgttagaatgtaggcatatcct 981 Query: 499 tgcatgaccttgtcggaggggaatggcca 527 |||||||| ||||| || ||||||||||| Sbjct: 980 tgcatgactttgtcagaagggaatggcca 952
>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete sequence Length = 178227 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 517 gggaatggccacatggcctgcgt 539 ||||||||||||||||||||||| Sbjct: 109909 gggaatggccacatggcctgcgt 109887
>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence Length = 40624 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 535 tgcgtggagcctgtatcgtggttgtcgacgaaggtgacggc 575 ||||||||||| || ||||||||||||| ||| || ||||| Sbjct: 17341 tgcgtggagccggtgtcgtggttgtcgatgaacgtcacggc 17381
>emb|X53049.1|VMALAMYL V.mungo mRNA for alpha-amylase (EC 3.2.1.1) Length = 1525 Score = 42.1 bits (21), Expect = 2.2 Identities = 72/89 (80%) Strand = Plus / Minus Query: 439 aagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccc 498 ||||| ||||||||||| || | ||| |||| ||||| || || ||||| || || || Sbjct: 1050 aagaagtggtcgtagaatattgagggggtgccagggtgtgttagaatgtaggcatatcct 991 Query: 499 tgcatgaccttgtcggaggggaatggcca 527 |||||||| ||||| || ||||||||||| Sbjct: 990 tgcatgactttgtcagaagggaatggcca 962
>emb|AL627097.6| Mouse DNA sequence from clone RP23-59B16 on chromosome 11 Contains a novel pseudogene, the Zfp287 gene for zinc finger protein 287, three novel genes (4921522H14Rik), a WD repeat and SOCS box containing protein 2 pseudogene (LOC213946), the gene for a novel protein (MGC39058) and the 5' end of the Trim16 gene for tripartite motif protein 16, complete sequence Length = 161686 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 gaggggaatggccacatggcc 534 ||||||||||||||||||||| Sbjct: 44830 gaggggaatggccacatggcc 44850
>dbj|AB096198.1| Vigna angularis mRNA for alpha-amylase, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 2.2 Identities = 72/89 (80%) Strand = Plus / Minus Query: 439 aagaaatggtcgtagaagatgcatgggatgccggggtgggtgaggatgtacgcgtagccc 498 ||||| ||||||||||| || | ||| |||| ||||| || || ||||| || || || Sbjct: 1070 aagaagtggtcgtagaatattgagggggtgccagggtgtgttagaatgtaggcatatcct 1011 Query: 499 tgcatgaccttgtcggaggggaatggcca 527 |||||||| ||||| || ||||||||||| Sbjct: 1010 tgcatgactttgtcagaagggaatggcca 982
>gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome 13, complete sequence Length = 187967 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ctggacccgatcttcaccac 305 |||||||||||||||||||| Sbjct: 114895 ctggacccgatcttcaccac 114876
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctgatcgccaccagcgccgc 413 |||||||||||||||||||| Sbjct: 6312277 ctgatcgccaccagcgccgc 6312296
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 accagcgccgcgatctggtc 422 |||||||||||||||||||| Sbjct: 200972 accagcgccgcgatctggtc 200991
>emb|CR937051.2|RN394C12 Rattus norvegicus chromosome 1 BAC CH230-394C12, complete sequence Length = 130117 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttttgggtacaggtatacat 90 |||||||||||||||||||| Sbjct: 35915 ttttgggtacaggtatacat 35934
>ref|XM_502461.1| Yarrowia lipolytica CLIB122, YALI0D05841g predicted mRNA Length = 2430 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 gccctgcatgaccttgtcgg 514 |||||||||||||||||||| Sbjct: 1923 gccctgcatgaccttgtcgg 1904
>ref|XM_787327.1| PREDICTED: Strongylocentrotus purpuratus similar to amylase-3 protein (LOC587610), mRNA Length = 2037 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tatcgtggttgtcgacgaag 567 |||||||||||||||||||| Sbjct: 856 tatcgtggttgtcgacgaag 837
>emb|X16732.1|PSAMYG4F P. saccharophila mta gene encoding maltotetraohydrolase (EC number=3.2.1.60) Length = 3050 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tcgtggttgtcgacgaaggt 569 |||||||||||||||||||| Sbjct: 1543 tcgtggttgtcgacgaaggt 1524
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gatcgccaccagcgccgcga 415 |||||||||||||||||||| Sbjct: 118483 gatcgccaccagcgccgcga 118464
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 ggtgacggccttggccggcc 586 |||||||||||||||||||| Sbjct: 241027 ggtgacggccttggccggcc 241046
>emb|AJ001205.3|SCO001205 Streptomyces coelicolor A3(2) glycogen metabolism clusterI Length = 9589 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 ggtgacggccttggccggcc 586 |||||||||||||||||||| Sbjct: 3881 ggtgacggccttggccggcc 3862
>dbj|AB229400.1| Aspergillus oryzae cDNA, contig sequence: AoEST6280 Length = 493 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gaataccagaagtgaatcatgtac 132 |||||||| ||||||||||||||| Sbjct: 373 gaataccacaagtgaatcatgtac 396
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gaataccagaagtgaatcatgtac 132 |||||||| ||||||||||||||| Sbjct: 841925 gaataccacaagtgaatcatgtac 841948
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ccagcgccgcgatctggtcc 423 |||||||||||||||||||| Sbjct: 1642137 ccagcgccgcgatctggtcc 1642156
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgatcgccaccagcgccgcg 414 |||||||||||||||||||| Sbjct: 4983973 tgatcgccaccagcgccgcg 4983954 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 caccagcgccgcgatctggt 421 |||||||||||||||||||| Sbjct: 1901610 caccagcgccgcgatctggt 1901591
>ref|XM_394675.2| PREDICTED: Apis mellifera similar to Discoidin domain receptor 2 precursor (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO 10) (Neurotrophic tyrosine kinase, receptor-related 3) (LOC411201), partial mRNA Length = 2779 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ccgcggcaccgttcttctcc 216 |||||||||||||||||||| Sbjct: 1277 ccgcggcaccgttcttctcc 1258
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cgccaccagcgccgcgatct 418 |||||||||||||||||||| Sbjct: 1606852 cgccaccagcgccgcgatct 1606871
>ref|XM_308342.2| Anopheles gambiae str. PEST ENSANGP00000019063 (ENSANGG00000016574), partial mRNA Length = 1371 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 gccgtgatgccgttgcgctt 392 |||||||||||||||||||| Sbjct: 815 gccgtgatgccgttgcgctt 796
>emb|AL591767.2|CNS07EGK Human chromosome 14 DNA sequence BAC R-831F12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189410 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 atcctcagtactttatttac 36 |||||||||||||||||||| Sbjct: 61839 atcctcagtactttatttac 61858
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cagcgccgcgatctggtcct 424 |||||||||||||||||||| Sbjct: 1343093 cagcgccgcgatctggtcct 1343074
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 gccctgcatgaccttgtcgg 514 |||||||||||||||||||| Sbjct: 750399 gccctgcatgaccttgtcgg 750418
>gb|M24516.1|PSEAMYP P.stutzeri maltotetraose-forming amylase (amyP) gene, complete cds Length = 2082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tcgtggttgtcgacgaaggt 569 |||||||||||||||||||| Sbjct: 1195 tcgtggttgtcgacgaaggt 1176
>dbj|AB077387.1| Ipomoea nil PnAmy1 mRNA for alpha-amylase, complete cds Length = 1635 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ccggggtgggtgaggatgta 488 |||||||||||||||||||| Sbjct: 1012 ccggggtgggtgaggatgta 993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,723,434 Number of Sequences: 3902068 Number of extensions: 3723434 Number of successful extensions: 71627 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70676 Number of HSP's gapped (non-prelim): 903 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)