ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast72d03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106172.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C02, full insert sequence Length = 963 Score = 293 bits (148), Expect = 2e-76 Identities = 250/282 (88%), Gaps = 9/282 (3%) Strand = Plus / Plus Query: 49 ccatgggttggcgttggcacgacgacggcgagggcgacggtggccgcggcgggctcggcg 108 ||||||||||||||||||||||||||||||| | |||| ||||||||| || |||| Sbjct: 132 ccatgggttggcgttggcacgacgacggcgatg---acggcggccgcggc---ctgggcg 185 Query: 109 acgcccccgacctggccggccgaggcggcagcg---aggggaagcacctcggcacgcgcc 165 || ||||||||| |||||| | ||||| ||| | ||| ||| | || |||||||| Sbjct: 186 acatccccgacctcgccggcggcggcggaggcggagatggggagcgctgcgccacgcgcc 245 Query: 166 gggtggtgcagtcccgctgccacacggaggaggtggagcccggccgcttcgtccgcaagt 225 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gggtggtgcagtctcggtgccacacggaggaggtggagcccggccgcttcgtccgcaagt 305 Query: 226 gcgagaagaccgagcagctcctccgcgactgcgtcggcaggccctctgagctggtggaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 306 gcgagaagaccgagcagctcctccgcgactgcgtcggcaggccctctgaactggtggaat 365 Query: 286 caaaaactgagaacaccgaagaagatgtcacagatgaaatga 327 |||||||||| || || |||||||| |||||||||||||||| Sbjct: 366 caaaaactgaaaatactgaagaagacgtcacagatgaaatga 407 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 366 gagccctttgcatttccaggacttcgcagtgacatagaagctattgagaaaggc 419 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 443 gagccctttgcatttcctggacttcgcagtgacatagaagctcttgagaaaggc 496
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 212 bits (107), Expect = 7e-52 Identities = 194/221 (87%), Gaps = 9/221 (4%) Strand = Plus / Plus Query: 49 ccatgggttggcgttggcacgacgacggcgagggcgacggtggccgcggcgggctcggcg 108 ||||||||||||||||||||||||||||||| | |||| ||||||||| || |||| Sbjct: 32536693 ccatgggttggcgttggcacgacgacggcgatg---acggcggccgcggc---ctgggcg 32536746 Query: 109 acgcccccgacctggccggccgaggcggcagcg---aggggaagcacctcggcacgcgcc 165 || ||||||||| |||||| | ||||| ||| | ||| ||| | || |||||||| Sbjct: 32536747 acatccccgacctcgccggcggcggcggaggcggagatggggagcgctgcgccacgcgcc 32536806 Query: 166 gggtggtgcagtcccgctgccacacggaggaggtggagcccggccgcttcgtccgcaagt 225 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32536807 gggtggtgcagtctcggtgccacacggaggaggtggagcccggccgcttcgtccgcaagt 32536866 Query: 226 gcgagaagaccgagcagctcctccgcgactgcgtcggcagg 266 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 32536867 gcgagaagaccgagcagctcctccgcgactgcgtcggcagg 32536907 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 366 gagccctttgcatttccaggacttcgcagtgacatagaagctattgagaaaggc 419 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 32537929 gagccctttgcatttcctggacttcgcagtgacatagaagctcttgagaaaggc 32537982 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 264 aggccctctgagctggtggaatcaaaaactgagaacaccgaagaagatgtcacagatgaa 323 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 32537830 aggccctctgaactggtggaatcaaaaactgaaaatactgaagaagacgtcacagatgaa 32537889 Query: 324 atga 327 |||| Sbjct: 32537890 atga 32537893 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||||||||||||||| |||| Sbjct: 32228130 gcgacggtggccgcggcggactcg 32228107 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||| |||||||||||||||| Sbjct: 638690 gcgacggcggccgcggcgggctcg 638667
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 212 bits (107), Expect = 7e-52 Identities = 194/221 (87%), Gaps = 9/221 (4%) Strand = Plus / Plus Query: 49 ccatgggttggcgttggcacgacgacggcgagggcgacggtggccgcggcgggctcggcg 108 ||||||||||||||||||||||||||||||| | |||| ||||||||| || |||| Sbjct: 124214 ccatgggttggcgttggcacgacgacggcgatg---acggcggccgcggc---ctgggcg 124267 Query: 109 acgcccccgacctggccggccgaggcggcagcg---aggggaagcacctcggcacgcgcc 165 || ||||||||| |||||| | ||||| ||| | ||| ||| | || |||||||| Sbjct: 124268 acatccccgacctcgccggcggcggcggaggcggagatggggagcgctgcgccacgcgcc 124327 Query: 166 gggtggtgcagtcccgctgccacacggaggaggtggagcccggccgcttcgtccgcaagt 225 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124328 gggtggtgcagtctcggtgccacacggaggaggtggagcccggccgcttcgtccgcaagt 124387 Query: 226 gcgagaagaccgagcagctcctccgcgactgcgtcggcagg 266 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 124388 gcgagaagaccgagcagctcctccgcgactgcgtcggcagg 124428 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 366 gagccctttgcatttccaggacttcgcagtgacatagaagctattgagaaaggc 419 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 125450 gagccctttgcatttcctggacttcgcagtgacatagaagctcttgagaaaggc 125503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 264 aggccctctgagctggtggaatcaaaaactgagaacaccgaagaagatgtcacagatgaa 323 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 125351 aggccctctgaactggtggaatcaaaaactgaaaatactgaagaagacgtcacagatgaa 125410 Query: 324 atga 327 |||| Sbjct: 125411 atga 125414
>ref|NM_191422.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 471 Score = 206 bits (104), Expect = 4e-50 Identities = 191/218 (87%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 51 atgggttggcgttggcacgacgacggcgagggcgacggtggccgcggcgggctcggcgac 110 ||||||||||||||||||||||||||||| | |||| ||||||||| || |||||| Sbjct: 1 atgggttggcgttggcacgacgacggcgatg---acggcggccgcggc---ctgggcgac 54 Query: 111 gcccccgacctggccggccgaggcggcagcg---aggggaagcacctcggcacgcgccgg 167 ||||||||| |||||| | ||||| ||| | ||| ||| | || |||||||||| Sbjct: 55 atccccgacctcgccggcggcggcggaggcggagatggggagcgctgcgccacgcgccgg 114 Query: 168 gtggtgcagtcccgctgccacacggaggaggtggagcccggccgcttcgtccgcaagtgc 227 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 gtggtgcagtctcggtgccacacggaggaggtggagcccggccgcttcgtccgcaagtgc 174 Query: 228 gagaagaccgagcagctcctccgcgactgcgtcggcag 265 |||||||||||||||||||||||||||||||||||||| Sbjct: 175 gagaagaccgagcagctcctccgcgactgcgtcggcag 212 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 391 gcagtgacatagaagctattgagaaaggc 419 ||||||||||||||||| ||||||||||| Sbjct: 209 gcagtgacatagaagctcttgagaaaggc 237
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 366 gagccctttgcatttccaggacttcgcagtgacatagaagctattgagaaaggc 419 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 724 gagccctttgcatttcctggacttcgcagtgacatagaagctcttgagaaaggc 777 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 264 aggccctctgagctggtggaatcaaaaactgagaacaccgaagaagatgtcacagatgaa 323 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 625 aggccctctgaactggtggaatcaaaaactgaaaatactgaagaagacgtcacagatgaa 684 Query: 324 atga 327 |||| Sbjct: 685 atga 688
>gb|AY262166.1| Malus x domestica Mal d 1-associated protein (mdap) gene, complete cds Length = 1806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 192 gaggaggtggagcccggccgcttcgtccgcaagtgcgagaagaccgagcagctcctccgc 251 |||||||||||||| || |||||| | ||||||||||||||||||||||| ||| | Sbjct: 143 gaggaggtggagcctggaaagttcgtcaggaagtgcgagaagaccgagcagcttctcagg 202 Query: 252 gactgcgtcggc 263 ||||||| |||| Sbjct: 203 gactgcgccggc 214
>ref|XM_470818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 390 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 81 ggcgacggtggccgcggcgggctcggcgacg 111 ||||| || |||||||||||||||||||||| Sbjct: 300 ggcgatggcggccgcggcgggctcggcgacg 270 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 353 gcgaccgtggccgcggcgggctcagcgacg 324
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 81 ggcgacggtggccgcggcgggctcggcgacg 111 ||||| || |||||||||||||||||||||| Sbjct: 15562778 ggcgatggcggccgcggcgggctcggcgacg 15562808 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 22065729 gcgaccgtggccgcggcgggctcagcgacg 22065700 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 15562725 gcgaccgtggccgcggcgggctcagcgacg 15562754 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 acgacgacggcgagggcgacg 87 ||||||||||||||||||||| Sbjct: 31581342 acgacgacggcgagggcgacg 31581322 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 5602376 gggcgacggtggcggcggtgggctcgacgacg 5602345
>ref|XM_545386.2| PREDICTED: Canis familiaris similar to Histone H1.2 (H1d) (LOC488264), mRNA Length = 837 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 81 ggcgacggtggccgcggcgggct 103 ||||||||||||||||||||||| Sbjct: 501 ggcgacggtggccgcggcgggct 479
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 81 ggcgacggtggccgcggcgggctcggcgacg 111 ||||| || |||||||||||||||||||||| Sbjct: 62329 ggcgatggcggccgcggcgggctcggcgacg 62359 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 62276 gcgaccgtggccgcggcgggctcagcgacg 62305
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 81 ggcgacggtggccgcggcgggctcggcgacg 111 ||||| || |||||||||||||||||||||| Sbjct: 15557312 ggcgatggcggccgcggcgggctcggcgacg 15557342 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 22058758 gcgaccgtggccgcggcgggctcagcgacg 22058729 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 15557259 gcgaccgtggccgcggcgggctcagcgacg 15557288 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 acgacgacggcgagggcgacg 87 ||||||||||||||||||||| Sbjct: 31671848 acgacgacggcgagggcgacg 31671828 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 5601591 gggcgacggtggcggcggtgggctcgacgacg 5601560
>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence Length = 143300 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 acgacgacggcgagggcgacgg 88 |||||||||||||||||||||| Sbjct: 15609 acgacgacggcgagggcgacgg 15630
>gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's Hospital Oakland Research Institute) complete sequence Length = 234420 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 ggcgggctcggcgacgcccccg 117 |||||||||||||||||||||| Sbjct: 189186 ggcgggctcggcgacgcccccg 189165
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 gcgacggtggccgcggcgggctcggcgacg 111 ||||| ||||||||||||||||| |||||| Sbjct: 82553 gcgaccgtggccgcggcgggctcagcgacg 82582
>ref|XM_235013.2| PREDICTED: Rattus norvegicus achaete-scute complex-like 4 (Drosophila) (predicted) (Ascl4_predicted), mRNA Length = 603 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 ggcgggctcggcgacgcccccg 117 |||||||||||||||||||||| Sbjct: 342 ggcgggctcggcgacgcccccg 321
>gb|AF176231.1|AF176231 Polyporus ciliatus laccase (lcc3-2) mRNA, complete cds Length = 2020 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 gacggtggccgcggcgggctcg 105 |||||||||||||||||||||| Sbjct: 1024 gacggtggccgcggcgggctcg 1003
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 acgacgacggcgagggcgacg 87 ||||||||||||||||||||| Sbjct: 99325 acgacgacggcgagggcgacg 99345
>ref|XM_972718.1| PREDICTED: Mus musculus RIKEN cDNA 1700054F16 gene (1700054F16Rik), mRNA Length = 878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ggcgggctcggcgacgccccc 116 ||||||||||||||||||||| Sbjct: 177 ggcgggctcggcgacgccccc 157
>ref|XM_988322.1| PREDICTED: Mus musculus RIKEN cDNA 1700054F16 gene (1700054F16Rik), mRNA Length = 878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ggcgggctcggcgacgccccc 116 ||||||||||||||||||||| Sbjct: 177 ggcgggctcggcgacgccccc 157
>ref|XM_986783.1| PREDICTED: Mus musculus RIKEN cDNA 1700054F16 gene (1700054F16Rik), mRNA Length = 878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ggcgggctcggcgacgccccc 116 ||||||||||||||||||||| Sbjct: 177 ggcgggctcggcgacgccccc 157
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 acgacgacggcgagggcgacg 87 ||||||||||||||||||||| Sbjct: 11264 acgacgacggcgagggcgacg 11284
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence Length = 221920 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ggcgggctcggcgacgccccc 116 ||||||||||||||||||||| Sbjct: 169371 ggcgggctcggcgacgccccc 169391
>gb|AY319523.1| Mycobacterium smegmatis calmodulin-like protein (camL) gene, complete cds Length = 420 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 104 cggcgacgcccccgacctggccggccgaggcgg 136 ||||| || ||||||||||||| |||||||||| Sbjct: 160 cggcgtcggccccgacctggcccgccgaggcgg 192
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence Length = 222520 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ggcgggctcggcgacgccccc 116 ||||||||||||||||||||| Sbjct: 161844 ggcgggctcggcgacgccccc 161864
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcg 108 ||||| ||||||| ||||||||||||||| Sbjct: 2365981 gggcggcggtggcggcggcgggctcggcg 2366009 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggcgacggtggccgcggcgg 100 |||||||||||||||||||| Sbjct: 4585301 ggcgacggtggccgcggcgg 4585282
>gb|AF285263.1|AF285263 Myxococcus xanthus MrpA (mrpA), MrpB (mrpB), MrpC (mrpC), and PAH (pah) genes, complete cds Length = 6983 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 ggaggaggtggagcccggccgcttc 215 ||||||||||||| ||||||||||| Sbjct: 2674 ggaggaggtggaggccggccgcttc 2698
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cggcgagggcgacggtggccg 94 ||||||||||||||||||||| Sbjct: 23801468 cggcgagggcgacggtggccg 23801488 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 10319352 gggcgacggtggcggcggtgggctcgacgacg 10319321
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence Length = 182748 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ggcgggctcggcgacgccccc 116 ||||||||||||||||||||| Sbjct: 26751 ggcgggctcggcgacgccccc 26771
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ggcacgacgacggcgagggcg 84 ||||||||||||||||||||| Sbjct: 4701181 ggcacgacgacggcgagggcg 4701161
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggc 102 ||||||||||||||||||||| Sbjct: 90558 gcgacggtggccgcggcgggc 90538
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cggcgagggcgacggtggccg 94 ||||||||||||||||||||| Sbjct: 23134 cggcgagggcgacggtggccg 23154
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer, PPR794, PPR683, PPR762 genes for hypothetical protein, complete cds Length = 76363 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ggcacgacgacggcgagggcgacgg 88 |||||||||||||||| |||||||| Sbjct: 60112 ggcacgacgacggcgacggcgacgg 60088
>dbj|AK072375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M01, full insert sequence Length = 3667 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cggcgagggcgacggtggccg 94 ||||||||||||||||||||| Sbjct: 225 cggcgagggcgacggtggccg 205
>gb|AC005725.1|AC005725 Homo sapiens chromosome 17, clone hRPK.680_C_21, complete sequence Length = 197915 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aagatgtcacagatgaaatga 327 ||||||||||||||||||||| Sbjct: 60443 aagatgtcacagatgaaatga 60423
>gb|U49152.1|MXU49152 Myxococcus xanthus putative sigma-54 dependent transcriptional activator (189_Mxa) gene, partial cds Length = 420 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 ggaggaggtggagcccggccgcttc 215 ||||||||||||| ||||||||||| Sbjct: 219 ggaggaggtggaggccggccgcttc 243
>ref|XM_549882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 489 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||| |||||||||||||||| Sbjct: 410 gcgacggcggccgcggcgggctcg 387
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 133993 gggcgacggtggcggcggtgggctcgacgacg 133962
>ref|NM_191369.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||||||||||||||| |||| Sbjct: 681 gcgacggtggccgcggcggactcg 704
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gtggccgcggcgggctcggcgacg 111 ||||||||||||||||| |||||| Sbjct: 42085 gtggccgcggcgggctcagcgacg 42108
>gb|AY022883.1| Oryza sativa microsatellite MRG5208 containing (CGG)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 69 gacgacggcgagggcgacggtggccgcggcgg 100 ||||||||||| |||||||| ||| ||||||| Sbjct: 84 gacgacggcgatggcgacggcggcggcggcgg 115
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cacgacgacggcgagggcga 85 |||||||||||||||||||| Sbjct: 221152 cacgacgacggcgagggcga 221171
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 cgacgacggcgagggcgacggtggccgcggcg 99 |||||||||||| |||||||| ||| |||||| Sbjct: 25692 cgacgacggcgacggcgacggcggcggcggcg 25723
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 cgacgacggcgagggcgacggtggccgcggcg 99 |||||||||||| |||||||| ||| |||||| Sbjct: 126380 cgacgacggcgacggcgacggcggcggcggcg 126411
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 5758 gggcgacggtggcggcggtgggctcgacgacg 5727
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gtggccgcggcgggctcggcgacg 111 ||||||||||||||||| |||||| Sbjct: 146795 gtggccgcggcgggctcagcgacg 146818
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggct 103 ||||| |||||||||||||||||| Sbjct: 969085 gggcgccggtggccgcggcgggct 969062
>ref|XM_747174.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g09000) partial mRNA Length = 708 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 gagaacaccgaagaagatgtcacagatg 321 |||||||| ||||||| ||||||||||| Sbjct: 394 gagaacacggaagaagctgtcacagatg 421
>ref|XM_802884.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509231.39) partial mRNA Length = 417 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 ggcgacggtggccgcggcgggctcggcg 108 |||| ||||||||||||||||| ||||| Sbjct: 187 ggcggcggtggccgcggcgggcgcggcg 214
>gb|AC011621.10|ATAC011621 Arabidopsis thaliana chromosome III BAC F23H6 genomic sequence, complete sequence Length = 90336 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tccaggacttcgcagtgacataga 403 ||||||||||||||||||| |||| Sbjct: 70596 tccaggacttcgcagtgacgtaga 70573
>gb|AC005084.2| Homo sapiens BAC clone CTA-298G8 from 7, complete sequence Length = 177901 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gagccctttgcatttccagg 385 |||||||||||||||||||| Sbjct: 10859 gagccctttgcatttccagg 10840
>gb|AY310554.1| Arachis hypogaea clone PM368 microsatellite sequence Length = 242 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 acggcgagggcgacggtggc 92 |||||||||||||||||||| Sbjct: 110 acggcgagggcgacggtggc 91
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ggcgacggtggccgcggcgg 100 |||||||||||||||||||| Sbjct: 493040 ggcgacggtggccgcggcgg 493059
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggct 103 ||||| |||||||||||||||||| Sbjct: 284799 gggcgccggtggccgcggcgggct 284776
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggct 103 ||||| |||||||||||||||||| Sbjct: 302538 gggcgccggtggccgcggcgggct 302515
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 57 tggcgttggcacgacgacggcgagggcgacgg 88 |||||||| | |||||||||||| |||||||| Sbjct: 68933 tggcgttgtcgcgacgacggcgacggcgacgg 68902
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 88381 gggcgacggtggcggcggtgggctcgacgacg 88350
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 145908 gggcgacggtggcggcggtgggctcgacgacg 145877
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgacggtggccgcggcgggc 102 |||||||||||||||||||| Sbjct: 4881674 cgacggtggccgcggcgggc 4881655 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cggtggccgcggcgggctcggcga 109 ||||||||||||||| |||||||| Sbjct: 1813465 cggtggccgcggcggcctcggcga 1813442
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 57 tggcgttggcacgacgacggcgagggcgacgg 88 |||||||| | |||||||||||| |||||||| Sbjct: 3602649 tggcgttgtcgcgacgacggcgacggcgacgg 3602618
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 9608645 gggcgacggtggcggcggtgggctcgacgacg 9608676
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 cgacgacggcgagggcgacggtggccgcggcg 99 |||||||||||| |||||||| ||| |||||| Sbjct: 7690575 cgacgacggcgacggcgacggcggcggcggcg 7690544
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 69 gacgacggcgagggcgacggtggccgcggcgg 100 ||||||||||| |||||||| ||| ||||||| Sbjct: 5782715 gacgacggcgatggcgacggcggcggcggcgg 5782746 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 379027 gggcgacggtggcggcggtgggctcgacgacg 379058
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 cgagggcgacggtggccgcggcgg 100 |||||||| ||||||||||||||| Sbjct: 21040076 cgagggcgtcggtggccgcggcgg 21040053
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 cgacggcgagggcgacggtggccg 94 ||||||||||||| |||||||||| Sbjct: 12209457 cgacggcgagggccacggtggccg 12209434
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 25271152 gggcgacggtggcggcggtgggctcgacgacg 25271121 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gtggccgcggcgggctcggcgacg 111 ||||||||||||||||| |||||| Sbjct: 9270140 gtggccgcggcgggctcagcgacg 9270163
>gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complete sequence Length = 74521 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagatgtcacagatgaaatg 326 |||||||||||||||||||| Sbjct: 29992 aagatgtcacagatgaaatg 29973
>gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, complete sequence Length = 208024 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 aagatgtcacagatgaaatg 326 |||||||||||||||||||| Sbjct: 39962 aagatgtcacagatgaaatg 39943
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||||||||||||||| |||| Sbjct: 98883 gcgacggtggccgcggcggactcg 98860
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 66075 gggcgacggtggcggcggtgggctcgacgacg 66044
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 cgagggcgacggtggccgcggcgg 100 |||||||| ||||||||||||||| Sbjct: 83375 cgagggcgtcggtggccgcggcgg 83352
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 cgacggcgagggcgacggtggccg 94 ||||||||||||| |||||||||| Sbjct: 46479 cgacggcgagggccacggtggccg 46456
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||| |||||||||||||||| Sbjct: 22434 gcgacggcggccgcggcgggctcg 22411
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||| |||||||||||||||| Sbjct: 113295 gcgacggcggccgcggcgggctcg 113272
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 85162 gggcgacggtggcggcggtgggctcgacgacg 85131
>gb|AE005017.1| Halobacterium sp. NRC-1 section 48 of 170 of the complete genome Length = 12046 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gctcggcgacgcccccgacc 120 |||||||||||||||||||| Sbjct: 3987 gctcggcgacgcccccgacc 4006
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 88541 gggcgacggtggcggcggtgggctcgacgacg 88572
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 69 gacgacggcgagggcgacggtggccgcggcgg 100 ||||||||||| |||||||| ||| ||||||| Sbjct: 137340 gacgacggcgatggcgacggcggcggcggcgg 137371
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 69 gacgacggcgagggcgacggtggccgcggcgg 100 ||||||||||| |||||||| ||| ||||||| Sbjct: 36860 gacgacggcgatggcgacggcggcggcggcgg 36891
>dbj|AK106122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E12, full insert sequence Length = 1870 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 gcgacggtggccgcggcgggctcg 105 ||||||||||||||||||| |||| Sbjct: 515 gcgacggtggccgcggcggactcg 538
>dbj|AK105539.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H08, full insert sequence Length = 1302 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 cgacgacggcgagggcgacggtggccgcggcg 99 |||||||||||| |||||||| ||| |||||| Sbjct: 1121 cgacgacggcgacggcgacggcggcggcggcg 1152
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggcgacggtggccgcggcgg 100 |||||||||||||||||||| Sbjct: 3034566 ggcgacggtggccgcggcgg 3034547
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cgacgcccccgacctggccg 126 |||||||||||||||||||| Sbjct: 47205 cgacgcccccgacctggccg 47186
>dbj|AB092484.1| Oryza sativa (japonica cultivar-group) OsGA2ox2 gene for putative gibberellin 2-oxidase, complete cds Length = 12256 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||| | ||||| |||||||||||| Sbjct: 3167 gggcgacggtgacagcggcaggctcggcgacg 3198
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 cgacgacggcgagggcgacggtggccgcggcg 99 |||||||||||| |||||||| ||| |||||| Sbjct: 7760662 cgacgacggcgacggcgacggcggcggcggcg 7760631
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 9608530 gggcgacggtggcggcggtgggctcgacgacg 9608561
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165137 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 gggcgacggtggccgcggcgggctcggcgacg 111 ||||||||||||| |||| ||||||| ||||| Sbjct: 71956 gggcgacggtggcggcggtgggctcgacgacg 71987 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,387,716 Number of Sequences: 3902068 Number of extensions: 3387716 Number of successful extensions: 71328 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69009 Number of HSP's gapped (non-prelim): 2318 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
