ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf2j07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ102383.2| Hordeum vulgare root abundant factor (RAF) mRNA, complete cds Length = 1394 Score = 595 bits (300), Expect = e-166 Identities = 416/454 (91%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 282 aggacttcgacgacgacctcgacctgcggcaggcggaggaggacgccgacgaccacgtcg 341 |||||||||| ||| || ||||||||||| || |||||| | || ||||||||| |||| Sbjct: 191 aggacttcgatgaccacttcgacctgcgggcggaggaggacggcggcgacgaccatgtcg 250 Query: 342 ttttcgcgtgcaagcctgccttctctccgggtccggcctacgacggtggccgcgcggcac 401 | || || | |||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct: 251 tctttgcatccaagcctgccttctctccacgtccggcctacgacggtggccgcgcggcgc 310 Query: 402 aggcggcgagcaggaagaag---aagcgcgtcctccacggcatccggcagcgtccgtggg 458 | |||||||||||||||||| | || |||||| |||||||||||||| ||||||| Sbjct: 311 atgcggcgagcaggaagaagcgcaccggccacctccatggcatccggcagcggccgtggg 370 Query: 459 gcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgt 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 gcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgt 430 Query: 519 tcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggca 578 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 431 tcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgtggca 490 Query: 579 gcaaggccaaggtcaacttccccgacgcggccagggccggggcgcgcccgcgccgcgcca 638 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 491 gcaaggccaaggtcaacttccccgacgcggccaggaccggggctcgcccgcgccgcgcca 550 Query: 639 gccgtagaaccgcgcagaaaccgcaacgcccccctgcctggacgacggcgtactctgcca 698 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 551 gccgtagaaccgcgcagaaaccgcaatgcccccctgcgcggacgacggcgtactctgcca 610 Query: 699 cagcagccgcacactcacagccggagcaggacgc 732 | ||||| |||| | ||||||||||||||||||| Sbjct: 611 ccgcagcagcacgcgcacagccggagcaggacgc 644 Score = 341 bits (172), Expect = 4e-90 Identities = 303/348 (87%), Gaps = 9/348 (2%) Strand = Plus / Plus Query: 727 ggacgccttcgtcgacctgaccactgccgtcaccgcgctaccgcctatcatggaaagctc 786 ||||||| ||||| ||||||||||||||||| |||||||||||||| ||| || ||| | Sbjct: 684 ggacgccatcgtccacctgaccactgccgtcgccgcgctaccgcctgtcacggcgagcac 743 Query: 787 cttcgccgacagcggctcgacgaagccgatgttccacgaggactcttcagcggggagcgg 846 ||||||||||| ||| ||||| | || ||||||||||||| | ||||||||| Sbjct: 744 cttcgccgaca---------cgatgccgagggtcgacgaggactcttctgtggggagcgg 794 Query: 847 cggcggtgccatgccggggttcaccgacgagcttgggttcgatccattcatgctgttcca 906 |||||| ||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 795 cggcggcgccatgctggggttcgccgacgagcttgggttcgatccgttcatgatgttcca 854 Query: 907 gctcccctgctcggacacgtatgaatccatcgacagcctcttcgccggagacgctgccct 966 ||| ||||||||||||| ||| |||||| ||||||| |||||||||||||||||| | | Sbjct: 855 gctaccctgctcggacatgtacgaatccgccgacagcatcttcgccggagacgctgtcat 914 Query: 967 ccaggatgcccgcggtgtggacagcggcatcgacggcgtcagcctctggagcttcgacga 1026 || |||||||| | | |||||||| ||||| |||| |||||||||||||||||||||||| Sbjct: 915 cccggatgccctcagcgtggacagtggcatggacgccgtcagcctctggagcttcgacga 974 Query: 1027 attccccatggacagcgccattttctgacgctctccgtgtgatgcact 1074 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 975 gttccccatggacagcgccattttctgacgctttccgtgtgatgcact 1022 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 113 atgtgcggcggcgccatcctagcggagctgatctcgccgtcggcgggccgtgcgccgaag 172 ||||| |||||||||||||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 16 atgtgtggcggcgccatcctagcgcagctgatcccgccgtcggcgggccgtccgtcgaag 75 Query: 173 caggcg 178 |||||| Sbjct: 76 caggcg 81 Score = 71.9 bits (36), Expect = 6e-09 Identities = 62/68 (91%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 1115 tgcatgattgcttccttgatgaatgctgatg-gaaatgtattctactgtttgagtttc-t 1172 |||||||||||||||| |||||| || ||| |||||||||||||||||||||||||| | Sbjct: 1150 tgcatgattgcttcctcgatgaacgcagattcgaaatgtattctactgtttgagtttctt 1209 Query: 1173 gttcgtca 1180 |||||||| Sbjct: 1210 gttcgtca 1217 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1202 aactgtattgtaccctgtcatgattttttctagtctttggtactg 1246 ||||||||||||| |||||||||| | | |||||||||||||||| Sbjct: 1288 aactgtattgtactctgtcatgatctgtactagtctttggtactg 1332
>gb|DQ102384.2| Hordeum vulgare root abundant factor (RAF) gene, promoter region and complete cds Length = 3958 Score = 533 bits (269), Expect = e-148 Identities = 337/359 (93%), Gaps = 3/359 (0%) Strand = Plus / Plus Query: 377 gcctacgacggtggccgcgcggcacaggcggcgagcaggaagaag---aagcgcgtcctc 433 ||||||||||||||||||||||| || |||||||||||||||||| | || |||| Sbjct: 2850 gcctacgacggtggccgcgcggcgcatgcggcgagcaggaagaagcgcaccggccacctc 2909 Query: 434 cacggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag 493 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2910 catggcatccggcagcggccgtggggcaagtgggcggcggagatccgcgacccgcacaag 2969 Query: 494 ggcacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2970 ggcacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 3029 Query: 554 gtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgcggccagg 613 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3030 gtcgccgcccgtcgcctccgtggcagcaaggccaaggtcaacttccccgacgcggccagg 3089 Query: 614 gccggggcgcgcccgcgccgcgccagccgtagaaccgcgcagaaaccgcaacgcccccct 673 ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3090 accggggctcgcccgcgccgcgccagccgtagaaccgcgcagaaaccgcaatgcccccct 3149 Query: 674 gcctggacgacggcgtactctgccacagcagccgcacactcacagccggagcaggacgc 732 || |||||||||||||||||||||| ||||| |||| | ||||||||||||||||||| Sbjct: 3150 gcgcggacgacggcgtactctgccaccgcagcagcacgcgcacagccggagcaggacgc 3208 Score = 341 bits (172), Expect = 4e-90 Identities = 303/348 (87%), Gaps = 9/348 (2%) Strand = Plus / Plus Query: 727 ggacgccttcgtcgacctgaccactgccgtcaccgcgctaccgcctatcatggaaagctc 786 ||||||| ||||| ||||||||||||||||| |||||||||||||| ||| || ||| | Sbjct: 3248 ggacgccatcgtccacctgaccactgccgtcgccgcgctaccgcctgtcacggcgagcac 3307 Query: 787 cttcgccgacagcggctcgacgaagccgatgttccacgaggactcttcagcggggagcgg 846 ||||||||||| ||| ||||| | || ||||||||||||| | ||||||||| Sbjct: 3308 cttcgccgaca---------cgatgccgagggtcgacgaggactcttctgtggggagcgg 3358 Query: 847 cggcggtgccatgccggggttcaccgacgagcttgggttcgatccattcatgctgttcca 906 |||||| ||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 3359 cggcggcgccatgctggggttcgccgacgagcttgggttcgatccgttcatgatgttcca 3418 Query: 907 gctcccctgctcggacacgtatgaatccatcgacagcctcttcgccggagacgctgccct 966 ||| ||||||||||||| ||| |||||| ||||||| |||||||||||||||||| | | Sbjct: 3419 gctaccctgctcggacatgtacgaatccgccgacagcatcttcgccggagacgctgtcat 3478 Query: 967 ccaggatgcccgcggtgtggacagcggcatcgacggcgtcagcctctggagcttcgacga 1026 || |||||||| | | |||||||| ||||| |||| |||||||||||||||||||||||| Sbjct: 3479 cccggatgccctcagcgtggacagtggcatggacgccgtcagcctctggagcttcgacga 3538 Query: 1027 attccccatggacagcgccattttctgacgctctccgtgtgatgcact 1074 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3539 gttccccatggacagcgccattttctgacgctttccgtgtgatgcact 3586 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 113 atgtgcggcggcgccatcctagcggagctgatctcgccgtcggcgggccgtgcgccgaag 172 ||||| |||||||||||||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 2465 atgtgtggcggcgccatcctagcgcagctgatcccgccgtcggcgggccgtccgtcgaag 2524 Query: 173 caggcg 178 |||||| Sbjct: 2525 caggcg 2530 Score = 71.9 bits (36), Expect = 6e-09 Identities = 62/68 (91%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 1115 tgcatgattgcttccttgatgaatgctgatg-gaaatgtattctactgtttgagtttc-t 1172 |||||||||||||||| |||||| || ||| |||||||||||||||||||||||||| | Sbjct: 3714 tgcatgattgcttcctcgatgaacgcagattcgaaatgtattctactgtttgagtttctt 3773 Query: 1173 gttcgtca 1180 |||||||| Sbjct: 3774 gttcgtca 3781 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 282 aggacttcgacgacgacctcgacctgcggcaggcggaggaggacgccgacgaccacgtcg 341 |||||||||| ||| || ||||||||||| || |||||| | || ||||||||| |||| Sbjct: 2640 aggacttcgatgaccacttcgacctgcgggcggaggaggacggcggcgacgaccatgtcg 2699 Query: 342 ttttcgcgtgcaagcctgccttctctcc 369 | || || | |||||||||||||||||| Sbjct: 2700 tctttgcatccaagcctgccttctctcc 2727 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1202 aactgtattgtaccctgtcatgattttttctagtctttggtactg 1246 ||||||||||||| |||||||||| | | |||||||||||||||| Sbjct: 3852 aactgtattgtactctgtcatgatctgtactagtctttggtactg 3896
>ref|NM_001055712.1| Oryza sativa (japonica cultivar-group) Os03g0183000 (Os03g0183000) mRNA, complete cds Length = 1574 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 429 ggcatccggcagcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggc 488 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 || ||||||||||||||||||||| |||| | || || ||||| || |||||||||||| Sbjct: 489 acgcgcgtctggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtc 548 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccg 602 | || || ||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaggcgcgccgcctccgcggcagcaaggccaaggtcaacttccccg 594 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 918 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 977 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 978 tacgagtccatcgacagcctcttcgccg 1005 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 1043 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 1097
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4331779 ggcatccggcagcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggc 4331720 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 || ||||||||||||||||||||| |||| | || || ||||| || |||||||||||| Sbjct: 4331719 acgcgcgtctggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtc 4331660 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccg 602 | || || ||||||||||||||||||||||||||||||||||||| Sbjct: 4331659 gaggcgcgccgcctccgcggcagcaaggccaaggtcaacttccccg 4331614 Score = 170 bits (86), Expect = 9e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 12685005 ccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggctc 12685064 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| |||| ||| ||||| | |||||| |||||||||||| ||||||||| ||| || Sbjct: 12685065 ggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgcatc 12685124 Query: 572 cgcggcagcaaggccaaggtcaacttcccc 601 ||||||| |||||||||||||||||||||| Sbjct: 12685125 cgcggcaccaaggccaaggtcaacttcccc 12685154 Score = 107 bits (54), Expect = 1e-19 Identities = 108/126 (85%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 4349818 ccgtgggggaagtgggcggcggagatccgcgaccccgtcgagggcgtccgcgtctggctc 4349759 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 |||||||||| ||| ||||| | ||||||| |||||||||| ||||||||| |||| Sbjct: 4349758 ggcacgttcgccaccgccgaggccgccgcccacgcctacgacgccgccgcccgcgacctc 4349699 Query: 572 cgcggc 577 |||||| Sbjct: 4349698 cgcggc 4349693 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 4354875 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 4354816 Query: 512 ggcac 516 ||||| Sbjct: 4354815 ggcac 4354811 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 4331290 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 4331231 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 4331230 tacgagtccatcgacagcctcttcgccg 4331203 Score = 71.9 bits (36), Expect = 6e-09 Identities = 92/110 (83%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc---gcacaagggcacccgcg 503 |||| ||||||||||||| |||||||||||||||||||| || | ||| |||||| Sbjct: 2782183 agcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcgggggagcccgcg 2782242 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 | |||||||||||||||||||| || || || ||||| ||||| |||||| Sbjct: 2782243 tgtggctcggcacgttcgacaccgcggaggaggccgcgcgggcgtacgac 2782292 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 4762890 tggggcaagtgggtggcggagatccgcctgccgcgcaaccgcacccgcctctggctgggc 4762831 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || ||||| | ||| |||||| Sbjct: 4762830 accttcgacaccgccgaggaggccgcgctggcgtacgac 4762792 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Minus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 4331165 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 4331111 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| | || |||||||||||||||||||| ||| || |||| Sbjct: 33979789 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgc 33979730 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcc 541 | ||||||||||| |||||||| ||||| || |||||| Sbjct: 33979729 ctgtggctcggcaccttcgacaccgccgaggaggccgcc 33979691 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Minus Query: 455 tggggcaagtgggcggcggagatccgcgac 484 |||||||||| |||||||||||||||||| Sbjct: 36088239 tggggcaagtttgcggcggagatccgcgac 36088210 Score = 42.1 bits (21), Expect = 5.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| ||||||| ||||||| || ||||||||||| || ||||| | || ||| Sbjct: 3966780 cggcagcggacgtgggggaagtgggtagccgagatccgcgagcccaacaagcggacgcgc 3966839 Query: 503 gtctggctcggcacgttcgacacggccga 531 ||||||||||| | |||| ||| ||||| Sbjct: 3966840 ctctggctcggctccttcgccaccgccga 3966868 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaggaggacgccgacgaccac 337 ||||||||||||||||||||| Sbjct: 17093048 gaggaggacgccgacgaccac 17093068
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 94833 ggcatccggcagcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggc 94892 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 || ||||||||||||||||||||| |||| | || || ||||| || |||||||||||| Sbjct: 94893 acgcgcgtctggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtc 94952 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccg 602 | || || ||||||||||||||||||||||||||||||||||||| Sbjct: 94953 gaggcgcgccgcctccgcggcagcaaggccaaggtcaacttccccg 94998 Score = 107 bits (54), Expect = 1e-19 Identities = 108/126 (85%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 76794 ccgtgggggaagtgggcggcggagatccgcgaccccgtcgagggcgtccgcgtctggctc 76853 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 |||||||||| ||| ||||| | ||||||| |||||||||| ||||||||| |||| Sbjct: 76854 ggcacgttcgccaccgccgaggccgccgcccacgcctacgacgccgccgcccgcgacctc 76913 Query: 572 cgcggc 577 |||||| Sbjct: 76914 cgcggc 76919 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 71737 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 71796 Query: 512 ggcac 516 ||||| Sbjct: 71797 ggcac 71801 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 95322 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 95381 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 95382 tacgagtccatcgacagcctcttcgccg 95409 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 95447 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 95501
>dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075D23, full insert sequence Length = 1575 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 430 ggcatccggcagcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggc 489 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 || ||||||||||||||||||||| |||| | || || ||||| || |||||||||||| Sbjct: 490 acgcgcgtctggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtc 549 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccg 602 | || || ||||||||||||||||||||||||||||||||||||| Sbjct: 550 gaggcgcgccgcctccgcggcagcaaggccaaggtcaacttccccg 595 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 919 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 978 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 979 tacgagtccatcgacagcctcttcgccg 1006 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 1044 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 1098
>dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F02, full insert sequence Length = 1249 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 431 ggcatccggcagcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggc 490 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 || ||||||||||||||||||||| |||| | || || ||||| || |||||||||||| Sbjct: 491 acgcgcgtctggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtc 550 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccg 602 | || || ||||||||||||||||||||||||||||||||||||| Sbjct: 551 gaggcgcgccgcctccgcggcagcaaggccaaggtcaacttccccg 596 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 920 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 979 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 980 tacgagtccatcgacagcctcttcgccg 1007 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 1045 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 1099
>ref|NM_001056603.1| Oryza sativa (japonica cultivar-group) Os03g0341000 (Os03g0341000) mRNA, complete cds Length = 1164 Score = 170 bits (86), Expect = 9e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 362 ccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggctc 421 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| |||| ||| ||||| | |||||| |||||||||||| ||||||||| ||| || Sbjct: 422 ggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgcatc 481 Query: 572 cgcggcagcaaggccaaggtcaacttcccc 601 ||||||| |||||||||||||||||||||| Sbjct: 482 cgcggcaccaaggccaaggtcaacttcccc 511
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 170 bits (86), Expect = 9e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 42695 ccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggctc 42754 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| |||| ||| ||||| | |||||| |||||||||||| ||||||||| ||| || Sbjct: 42755 ggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgcatc 42814 Query: 572 cgcggcagcaaggccaaggtcaacttcccc 601 ||||||| |||||||||||||||||||||| Sbjct: 42815 cgcggcaccaaggccaaggtcaacttcccc 42844
>dbj|AK111414.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-G01, full insert sequence Length = 1164 Score = 170 bits (86), Expect = 9e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 362 ccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggctc 421 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| |||| ||| ||||| | |||||| |||||||||||| ||||||||| ||| || Sbjct: 422 ggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgcatc 481 Query: 572 cgcggcagcaaggccaaggtcaacttcccc 601 ||||||| |||||||||||||||||||||| Sbjct: 482 cgcggcaccaaggccaaggtcaacttcccc 511
>ref|NM_001072784.1| Oryza sativa (japonica cultivar-group) Os12g0168100 (Os12g0168100) mRNA, partial cds Length = 1521 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 527 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgc 586 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 587 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgcc 646 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 647 ctccgcttccgcggcagccgcgccaagctcaacttccccga 687
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 3437434 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgc 3437375 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 3437374 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgcc 3437315 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 3437314 ctccgcttccgcggcagccgcgccaagctcaacttccccga 3437274 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 |||||| ||||||||||| |||||||| ||||| || |||||||| |||||||||| || Sbjct: 24236652 ccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggc 24236711 Query: 559 cgcccgtcgcctccgcggc 577 |||| | | |||||||||| Sbjct: 24236712 cgcctgcctcctccgcggc 24236730
>dbj|AK107125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B10, full insert sequence Length = 1521 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 527 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgc 586 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 587 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgcc 646 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 647 ctccgcttccgcggcagccgcgccaagctcaacttccccga 687
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 116487 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgc 116428 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 116427 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgcc 116368 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 116367 ctccgcttccgcggcagccgcgccaagctcaacttccccga 116327
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 153 bits (77), Expect = 2e-33 Identities = 140/161 (86%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 94481 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgc 94540 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 94541 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgcc 94600 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 94601 ctccgcttccgcggcagccgcgccaagctcaacttccccga 94641
>ref|NM_001067153.1| Oryza sativa (japonica cultivar-group) Os07g0674800 (Os07g0674800) mRNA, complete cds Length = 884 Score = 137 bits (69), Expect = 1e-28 Identities = 141/165 (85%) Strand = Plus / Plus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 261 ggcatcaggcggcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggc 320 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 | ||||||||||||||||| |||| ||| ||||| | || ||||| ||||||||| | Sbjct: 321 gcgcgcgtctggctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgaccgc 380 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 |||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 381 gccgcccgccgcatccgcggggccaaggccaaggtcaacttcccc 425
>ref|NM_001062185.1| Oryza sativa (japonica cultivar-group) Os05g0437100 (Os05g0437100) mRNA, complete cds Length = 1095 Score = 137 bits (69), Expect = 1e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||||||||||||||||| | ||||| Sbjct: 502 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccgcacaaggccgcccgc 561 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||||||||| ||||| || ||||| | || || || |||||||||| ||||| Sbjct: 562 gtctggctcggcaccttcgagaccgccgaggccgcggcgcgcgcctacgacgaggccgcg 621 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 622 ctccgcttccgcggcagccgcgccaagctcaacttccccga 662
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 137 bits (69), Expect = 1e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||||||||||||||||| | ||||| Sbjct: 50799 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccgcacaaggccgcccgc 50858 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||||||||| ||||| || ||||| | || || || |||||||||| ||||| Sbjct: 50859 gtctggctcggcaccttcgagaccgccgaggccgcggcgcgcgcctacgacgaggccgcg 50918 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 50919 ctccgcttccgcggcagccgcgccaagctcaacttccccga 50959
>gb|AY297447.1| Oryza sativa (japonica cultivar-group) AP2 domain transcription factor EREBP mRNA, complete cds Length = 885 Score = 137 bits (69), Expect = 1e-28 Identities = 141/165 (85%) Strand = Plus / Plus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 261 ggcatcaggcggcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggc 320 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 | ||||||||||||||||| |||| ||| ||||| | || ||||| ||||||||| | Sbjct: 321 gcgcgcgtctggctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgactgc 380 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 |||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 381 gccgcccgccgcatccgcggggccaaggccaaggtcaacttcccc 425
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 137 bits (69), Expect = 1e-28 Identities = 141/165 (85%) Strand = Plus / Minus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 28487791 ggcatcaggcggcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggc 28487732 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 | ||||||||||||||||| |||| ||| ||||| | || ||||| ||||||||| | Sbjct: 28487731 gcgcgcgtctggctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgaccgc 28487672 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 |||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 28487671 gccgcccgccgcatccgcggggccaaggccaaggtcaacttcccc 28487627 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Minus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 25388225 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 25388166 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 25388165 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 25388106 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 25388105 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 25388059 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| ||| |||||||| | |||||||||||||||||||||||| Sbjct: 7172739 cggcggcggccgtgggggaggtgggcggcggagatccgcgaccc 7172696 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacc 485 |||||||| ||||||| ||||||||||||||||| Sbjct: 11892917 ccgtgggggaagtgggaggcggagatccgcgacc 11892884 Score = 50.1 bits (25), Expect = 0.023 Identities = 43/49 (87%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 ||||||||||||||||| || ||||| || || || ||||||||||||| Sbjct: 5626257 tggctcggcacgttcgagaccgccgaggaggctgcgcgggcctacgacg 5626305 Score = 44.1 bits (22), Expect = 1.4 Identities = 64/78 (82%) Strand = Plus / Minus Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||||| |||| Sbjct: 7172679 cgcgtgtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 7172620 Query: 560 gcccgtcgcctccgcggc 577 || |||||||||||| Sbjct: 7172619 tgcctccgcctccgcggc 7172602 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tggctcggcacgttcgacacggccga 531 ||||||||||||||||| |||||||| Sbjct: 12773331 tggctcggcacgttcgagacggccga 12773306 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaggaggacgccgacgaccac 337 ||||||||||||||||||||| Sbjct: 2392885 gaggaggacgccgacgaccac 2392905
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 137 bits (69), Expect = 1e-28 Identities = 138/161 (85%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||||||||||||||||| | ||||| Sbjct: 21264193 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccgcacaaggccgcccgc 21264252 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||||||||| ||||| || ||||| | || || || |||||||||| ||||| Sbjct: 21264253 gtctggctcggcaccttcgagaccgccgaggccgcggcgcgcgcctacgacgaggccgcg 21264312 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| ||||||||||| |||||| ||||||||||||| Sbjct: 21264313 ctccgcttccgcggcagccgcgccaagctcaacttccccga 21264353 Score = 115 bits (58), Expect = 5e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgac 523 |||||||||||||||||||||||| |||||| ||||||||||||||||||| | || | Sbjct: 17103169 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 17103228 Query: 524 acggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaag 583 || ||||| || |||||||| |||||||||||||| || || | |||||||| |||| Sbjct: 17103229 accgccgaggaggccgcccgcgcctacgacgtcgcggcgcgcgacatccgcggcgccaag 17103288 Query: 584 gccaaggtcaacttcccc 601 |||||| ||||||||||| Sbjct: 17103289 gccaagctcaacttcccc 17103306 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| Sbjct: 24299743 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 24299684 Query: 527 gccgatgatgccgcccgggcctacgacg 554 ||||| || ||||| || |||||||||| Sbjct: 24299683 gccgaggaggccgcgcgcgcctacgacg 24299656 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Minus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| |||||||||||| || |||| ||| || | ||| ||||||||| Sbjct: 16466071 tgggggaagtgggtggcggagatccgggagccgcggaagcgctcgcgcaagtggctcggc 16466012 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||| ||| ||||| || |||||| ||||||||||| Sbjct: 16466011 accttcgccaccgccgaggacgccgccagggcctacgac 16465973 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccg 480 |||| ||||||||||||| |||||||||||||| Sbjct: 21884574 agcggccgtggggcaagtacgcggcggagatccg 21884607 Score = 42.1 bits (21), Expect = 5.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||| ||| |||||||||| || |||||||||||||||||||| Sbjct: 14530071 cggcggcggccgtggggcaggttctcggcggagatccgcgacccg 14530115 Score = 42.1 bits (21), Expect = 5.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcga 483 |||||||| | |||||||||||||| ||||||||||||| Sbjct: 23104083 cggcagcgccggtggggcaagtgggtctcggagatccgcga 23104123
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 137 bits (69), Expect = 1e-28 Identities = 141/165 (85%) Strand = Plus / Minus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 53543 ggcatcaggcggcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggc 53484 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 | ||||||||||||||||| |||| ||| ||||| | || ||||| ||||||||| | Sbjct: 53483 gcgcgcgtctggctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgaccgc 53424 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 |||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 53423 gccgcccgccgcatccgcggggccaaggccaaggtcaacttcccc 53379
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 137 bits (69), Expect = 1e-28 Identities = 141/165 (85%) Strand = Plus / Minus Query: 437 ggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggc 496 |||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 45332 ggcatcaggcggcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggc 45273 Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtc 556 | ||||||||||||||||| |||| ||| ||||| | || ||||| ||||||||| | Sbjct: 45272 gcgcgcgtctggctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgaccgc 45213 Query: 557 gccgcccgtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 |||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 45212 gccgcccgccgcatccgcggggccaaggccaaggtcaacttcccc 45168
>ref|NM_001066815.1| Oryza sativa (japonica cultivar-group) Os07g0617000 (Os07g0617000) mRNA, complete cds Length = 1433 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Plus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 446 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 505 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 506 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 565 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 566 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 612
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Minus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 81315 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 81256 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 81255 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 81196 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 81195 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 81149
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Minus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 11942 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 11883 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 11882 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 11823 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 11822 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 11776
>dbj|AK109360.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B03, full insert sequence Length = 1433 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Plus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 446 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 505 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 506 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 565 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 566 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 612
>dbj|AK067060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P08, full insert sequence Length = 1285 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Plus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 442 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 501 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 502 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 561 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 562 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 608
>dbj|AK061047.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F01, full insert sequence Length = 1417 Score = 133 bits (67), Expect = 2e-27 Identities = 142/167 (85%) Strand = Plus / Plus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| || ||||| || ||||||||||||||| | ||||| | ||||||| | Sbjct: 544 atccggcagcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtc 603 Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 |||||||||||||||||||||| ||| ||||| || |||||| ||| |||||||||| Sbjct: 604 cgcgtctggctcggcacgttcggcaccgccgaggaggccgccatggcgtacgacgtcgag 663 Query: 560 gcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgc 606 || || ||| ||||||||| || ||||||||||||||||||||||| Sbjct: 664 gcacgccgcatccgcggcaagaaagccaaggtcaacttccccgacgc 710
>gb|DQ244468.1| Zea mays clone 7948 mRNA sequence Length = 931 Score = 123 bits (62), Expect = 2e-24 Identities = 140/166 (84%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||| || || |||||||||||||||||||||||||| |||||| ||| || Sbjct: 337 cggcatccggcgccgcccctggggcaagtgggcggcggagatccgggacccggccaatgg 396 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | | ||||||||||||||||| |||| ||| ||||| | ||||| || ||||||||| Sbjct: 397 cgcgcgcgtctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcctacgaccg 456 Query: 556 cgccgcccgtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 |||||| || ||| ||||||| |||||||||||||||||||||| Sbjct: 457 cgccgcgcgccgcatccgcggggccaaggccaaggtcaacttcccc 502
>ref|NM_001069316.1| Oryza sativa (japonica cultivar-group) Os09g0286600 (Os09g0286600) mRNA, partial cds Length = 1241 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 324 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 383 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 384 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 442
>ref|NM_001068903.1| Oryza sativa (japonica cultivar-group) Os08g0537900 (Os08g0537900) mRNA, complete cds Length = 1856 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | || Sbjct: 1161 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgg 1220 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 1221 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgcc 1280 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccgacg 605 ||| || ||| |||||||||||||||||||||||||| Sbjct: 1281 gtccgcttcaagggctccaaggccaaggtcaacttccccgacg 1323
>gb|DQ453965.1| Oryza sativa (indica cultivar-group) clone BAC 118K20 chromosome 9 map Sub1 locus, complete sequence Length = 31999 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 15260 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 15201 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 15200 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 15142
>gb|AY341827.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP29 mRNA, complete cds Length = 1853 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | || Sbjct: 1163 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgg 1222 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 1223 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgcc 1282 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccgacg 605 ||| || ||| |||||||||||||||||||||||||| Sbjct: 1283 gtccgcttcaagggctccaaggccaaggtcaacttccccgacg 1325
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | || Sbjct: 26887394 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgg 26887453 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 26887454 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgcc 26887513 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccgacg 605 ||| || ||| |||||||||||||||||||||||||| Sbjct: 26887514 gtccgcttcaagggctccaaggccaaggtcaacttccccgacg 26887556 Score = 61.9 bits (31), Expect = 6e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| | ||||||||||||| ||| ||||||||||| || || || Sbjct: 28314927 cggcgtccggcagcgcacctggggcaagtgggtggccgagatccgcgagcccaaccgcgg 28314868 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||||| ||| |||| ||| || |||||||| ||||||||| Sbjct: 28314867 cgcccgcctctggctcggcaccttcaacaccgccctcgacgccgcccgcgcctacgactc 28314808 Query: 556 cgccgcc 562 ||||||| Sbjct: 28314807 cgccgcc 28314801 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 23347101 cggcagcggccatgggggaagtgggctgcggagatccgcgaccc 23347144 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 19540917 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 19540976 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 19540977 accttcgacaccgccga 19540993 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcg 482 |||||||| |||||||||||||||||||| Sbjct: 25943136 gtggggcaggtgggcggcggagatccgcg 25943164 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Minus Query: 505 ctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||||||| |||||||| ||||| || |||||| ||||||||| || ||||| Sbjct: 4298106 ctggctcggcaccttcgacaccgccgaggaggccgccgtcgcctacgacctctccgcc 4298049 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tggctcggcacgttcgacacggccga 531 |||||||||||||||||||| ||||| Sbjct: 19340752 tggctcggcacgttcgacaccgccga 19340727 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 ||||| || ||||||||||| ||||| || |||||| |||| |||||| ||||||| Sbjct: 23347164 tggctggggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgcc 23347220
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 6335121 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 6335062 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 6335061 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 6335003 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 6351454 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 6351395 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 6351394 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 6351336 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 |||||||| ||||||||||| ||||| || |||||| |||| |||||| |||||||| Sbjct: 17251974 tggctcgggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgccc 17252031 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| ||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 12163567 tgggggaagtgggtggcggagatccgcctcccgcggaaccgcacgcggctctggctcggc 12163626 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 12163627 accttcgacacagccga 12163643 Score = 48.1 bits (24), Expect = 0.091 Identities = 27/28 (96%) Strand = Plus / Minus Query: 504 tctggctcggcacgttcgacacggccga 531 |||||||||||||||||||||| ||||| Sbjct: 20103531 tctggctcggcacgttcgacaccgccga 20103504 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 836 gcggggagcggcggcggtgcc 856 ||||||||||||||||||||| Sbjct: 16854937 gcggggagcggcggcggtgcc 16854957
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence Length = 161873 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 94537 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 94596 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 94597 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 94655 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 78204 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 78263 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 78264 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 78322
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0663H05 Length = 161938 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 67400 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 67341 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 67340 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 67282 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 83733 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 83674 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 83673 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 83615
>dbj|AP005705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0453B09 Length = 173688 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 1198 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 1139 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 1138 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 1080 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 17531 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 17472 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 17471 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 17413
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | || Sbjct: 150184 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgg 150243 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 150244 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgcc 150303 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccgacg 605 ||| || ||| |||||||||||||||||||||||||| Sbjct: 150304 gtccgcttcaagggctccaaggccaaggtcaacttccccgacg 150346
>dbj|AK072749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139A06, full insert sequence Length = 1132 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 482 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 541 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 542 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 600
>dbj|AK065344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007H05, full insert sequence Length = 1516 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 412 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 471 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 472 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 530
>dbj|AK064252.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C06, full insert sequence Length = 1323 Score = 117 bits (59), Expect = 1e-22 Identities = 137/163 (84%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | || Sbjct: 463 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgg 522 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| || |||||||| |||||||||| ||||||| Sbjct: 523 gtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgcc 582 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccgacg 605 ||| || ||| |||||||||||||||||||||||||| Sbjct: 583 gtccgcttcaagggctccaaggccaaggtcaacttccccgacg 625
>dbj|AK060090.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A04, full insert sequence Length = 1241 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| Sbjct: 324 cggcatccggcagcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaaggg 383 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || |||||||||||||||||| |||||||| ||||| | ||||| || |||||||||| Sbjct: 384 catccgcgtctggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacg 442
>ref|NM_001061846.1| Oryza sativa (japonica cultivar-group) Os05g0361700 (Os05g0361700) mRNA, complete cds Length = 1049 Score = 115 bits (58), Expect = 5e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgac 523 |||||||||||||||||||||||| |||||| ||||||||||||||||||| | || | Sbjct: 236 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 295 Query: 524 acggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaag 583 || ||||| || |||||||| |||||||||||||| || || | |||||||| |||| Sbjct: 296 accgccgaggaggccgcccgcgcctacgacgtcgcggcgcgcgacatccgcggcgccaag 355 Query: 584 gccaaggtcaacttcccc 601 |||||| ||||||||||| Sbjct: 356 gccaagctcaacttcccc 373
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 115 bits (58), Expect = 5e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgac 523 |||||||||||||||||||||||| |||||| ||||||||||||||||||| | || | Sbjct: 47304 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 47363 Query: 524 acggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaag 583 || ||||| || |||||||| |||||||||||||| || || | |||||||| |||| Sbjct: 47364 accgccgaggaggccgcccgcgcctacgacgtcgcggcgcgcgacatccgcggcgccaag 47423 Query: 584 gccaaggtcaacttcccc 601 |||||| ||||||||||| Sbjct: 47424 gccaagctcaacttcccc 47441
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 115 bits (58), Expect = 5e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgac 523 |||||||||||||||||||||||| |||||| ||||||||||||||||||| | || | Sbjct: 96536 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 96595 Query: 524 acggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaag 583 || ||||| || |||||||| |||||||||||||| || || | |||||||| |||| Sbjct: 96596 accgccgaggaggccgcccgcgcctacgacgtcgcggcgcgcgacatccgcggcgccaag 96655 Query: 584 gccaaggtcaacttcccc 601 |||||| ||||||||||| Sbjct: 96656 gccaagctcaacttcccc 96673
>dbj|AK111676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155B14, full insert sequence Length = 911 Score = 115 bits (58), Expect = 5e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgac 523 |||||||||||||||||||||||| |||||| ||||||||||||||||||| | || | Sbjct: 111 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 170 Query: 524 acggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaag 583 || ||||| || |||||||| |||||||||||||| || || | |||||||| |||| Sbjct: 171 accgccgaggaggccgcccgcgcctacgacgtcgcggcgcgcgacatccgcggcgccaag 230 Query: 584 gccaaggtcaacttcccc 601 |||||| ||||||||||| Sbjct: 231 gccaagctcaacttcccc 248
>dbj|AK100184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H12, full insert sequence Length = 1050 Score = 115 bits (58), Expect = 5e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgac 523 |||||||||||||||||||||||| |||||| ||||||||||||||||||| | || | Sbjct: 237 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 296 Query: 524 acggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaag 583 || ||||| || |||||||| |||||||||||||| || || | |||||||| |||| Sbjct: 297 accgccgaggaggccgcccgcgcctacgacgtcgcggcgcgcgacatccgcggcgccaag 356 Query: 584 gccaaggtcaacttcccc 601 |||||| ||||||||||| Sbjct: 357 gccaagctcaacttcccc 374
>ref|NM_001072378.1| Oryza sativa (japonica cultivar-group) Os11g0168500 (Os11g0168500) mRNA, complete cds Length = 957 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | ||| Sbjct: 403 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgc 462 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| | ||||| || |||||||||| ||||||| Sbjct: 463 gtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgcc 522 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| |||||||| || |||||| ||||||||||||| Sbjct: 523 ctccgcttccgcggctgccgcgccaagctcaacttccccga 563
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | ||| Sbjct: 26350 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgc 26409 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| | ||||| || |||||||||| ||||||| Sbjct: 26410 gtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgcc 26469 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| |||||||| || |||||| ||||||||||||| Sbjct: 26470 ctccgcttccgcggctgccgcgccaagctcaacttccccga 26510
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | ||| Sbjct: 125651 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgc 125710 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| | ||||| || |||||||||| ||||||| Sbjct: 125711 gtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgcc 125770 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| |||||||| || |||||| ||||||||||||| Sbjct: 125771 ctccgcttccgcggctgccgcgccaagctcaacttccccga 125811
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| ||||||||||||||||||||||||||| |||| | ||| Sbjct: 3288635 cggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgc 3288576 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| | ||||| || |||||||||| ||||||| Sbjct: 3288575 gtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgcc 3288516 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| |||||||| || |||||| ||||||||||||| Sbjct: 3288515 ctccgcttccgcggctgccgcgccaagctcaacttccccga 3288475
>emb|CT837590.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI220I23, full insert sequence Length = 1999 Score = 105 bits (53), Expect = 4e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||| |||||||||||||||| |||| | ||| Sbjct: 1334 cggcagcggccgtgggggaagtgggcggaggagatccgcgacccggtgaaggcggcgcgc 1393 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||| |||||||| ||||| | ||||| || |||||||||| ||||||| Sbjct: 1394 gtgtggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgcc 1453 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| |||||||| || |||||| ||||||||||||| Sbjct: 1454 ctccgcttccgcggctgccgcgccaagctcaacttccccga 1494
>ref|NM_001051453.1| Oryza sativa (japonica cultivar-group) Os01g0868000 (Os01g0868000) mRNA, complete cds Length = 1056 Score = 105 bits (53), Expect = 4e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | || Sbjct: 400 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgg 459 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||||||||| ||||| || | || || ||||||||||||| ||||| Sbjct: 460 gtgtggctcggcacgttcgagacggcggaggccgcggcgcgggcctacgacgaggccgcg 519 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | || ||||||||||| |||||| ||||||||||||| Sbjct: 520 ctccggttccgcggcagccgcgccaagctcaacttccccga 560
>gb|AY672654.1| Zea mays ethylene-responsive factor-like protein 1 (ERF1) mRNA, complete cds Length = 1023 Score = 105 bits (53), Expect = 4e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 302 cggcatccggcagcggccgtggggcaagtgggcggcggagatccgcgaccccgtgaaggg 361 Query: 496 cacccgcgtctggctcggcac 516 | |||||||||||||||||| Sbjct: 362 cgtccgcgtctggctcggcac 382
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 105 bits (53), Expect = 4e-19 Identities = 134/161 (83%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | || Sbjct: 37583949 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgg 37583890 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||||||||| ||||| || | || || ||||||||||||| ||||| Sbjct: 37583889 gtgtggctcggcacgttcgagacggcggaggccgcggcgcgggcctacgacgaggccgcg 37583830 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | || ||||||||||| |||||| ||||||||||||| Sbjct: 37583829 ctccggttccgcggcagccgcgccaagctcaacttccccga 37583789 Score = 83.8 bits (42), Expect = 2e-12 Identities = 129/158 (81%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcg 503 ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 11767161 ggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcg 11767220 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 ||||||||||||| | | || ||||| | ||||| |||||||||||| |||||| | Sbjct: 11767221 tctggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 11767280 Query: 564 gtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 | ||| || | ||| |||||| ||||||||||||||| Sbjct: 11767281 gccgcatcaggggcgccaaggcgaaggtcaacttcccc 11767318 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 1746456 gtggggcaagtgggcggcggagatccgcaaccc 1746488 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 26728056 ccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgtgcgcgtctggctc 26727997 Query: 512 ggcacgttcgacacggccgatgatgccgc 540 ||||| |||||||| ||||| || ||||| Sbjct: 26727996 ggcaccttcgacaccgccgaggaggccgc 26727968 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 567 gcctccgcggcagcaaggccaaggtcaacttcc 599 |||||||||||||| |||||||||||||||||| Sbjct: 34015198 gcctccgcggcagcgaggccaaggtcaacttcc 34015166 Score = 48.1 bits (24), Expect = 0.091 Identities = 33/36 (91%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| |||| ||||||||||||||||||||| Sbjct: 6813538 ccgtgggggaagtacgcggcggagatccgcgacccg 6813573 Score = 48.1 bits (24), Expect = 0.091 Identities = 33/36 (91%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcc 541 |||||||||||||||||||| ||||| || |||||| Sbjct: 6813592 tggctcggcacgttcgacaccgccgaggaggccgcc 6813627 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 ggaggaggacgccgacgaccac 337 |||||||||||||||||||||| Sbjct: 7263042 ggaggaggacgccgacgaccac 7263063 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 316 ggaggaggacgccgacgaccac 337 |||||||||||||||||||||| Sbjct: 37737965 ggaggaggacgccgacgaccac 37737944 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaggaggacgccgacgaccac 337 ||||||||||||||||||||| Sbjct: 37294005 gaggaggacgccgacgaccac 37294025
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 105 bits (53), Expect = 4e-19 Identities = 134/161 (83%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| |||||||||||||||||||| ||||||||||||| | || Sbjct: 44423 cggcagcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgg 44364 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 || ||||||||||||||||| ||||| || | || || ||||||||||||| ||||| Sbjct: 44363 gtgtggctcggcacgttcgagacggcggaggccgcggcgcgggcctacgacgaggccgcg 44304 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | || ||||||||||| |||||| ||||||||||||| Sbjct: 44303 ctccggttccgcggcagccgcgccaagctcaacttccccga 44263
>ref|NM_001069318.1| Oryza sativa (japonica cultivar-group) Os09g0287100 (Os09g0287100) mRNA, complete cds Length = 921 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 484 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 425 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 424 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 366
>ref|NM_001069317.1| Oryza sativa (japonica cultivar-group) Os09g0287000 (Os09g0287000) mRNA, complete cds Length = 1107 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 398 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 457 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 458 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 516
>gb|DQ453964.1| Oryza sativa (indica cultivar-group) clone BAC 101O9 chromosome 9 map Sub1 locus, complete sequence Length = 37184 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 3561 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 3502 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 3501 cgcccgcgtctggctcggcaccttcgacaccgccgccgaggccgcgcgcgcctacgacg 3443
>dbj|AK106057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F09, full insert sequence Length = 1107 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 398 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 457 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 458 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 516
>dbj|AK068688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163J01, full insert sequence Length = 1106 Score = 101 bits (51), Expect = 7e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| |||||||| ||||||| |||||||||||||||| |||||| Sbjct: 399 cggcgtccggcagcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaaggg 458 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 | ||||||||||||||||||| |||||||| |||| || ||||| || |||||||||| Sbjct: 459 cgcccgcgtctggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 517
>gb|DQ244306.1| Zea mays clone 4614 mRNA sequence Length = 972 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 303 cggcatccggcagcggccgtggggcaagtgggcggcggagatccgtgaccccgtgaaggg 362 Query: 496 cacccgcgtctggctcggcac 516 | |||||||||||||||||| Sbjct: 363 cgtccgcgtctggctcggcac 383
>gb|AY105544.1| Zea mays PCO132999 mRNA sequence Length = 1121 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 338 cggcatccggcagcggccgtggggcaagtgggcggcggagatccgcgaccccgtgaaggg 397 Query: 496 cacccgcgtctggctcggcac 516 | ||||||||||||||||| Sbjct: 398 cgtgcgcgtctggctcggcac 418
>emb|CT831330.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126O21, full insert sequence Length = 1459 Score = 89.7 bits (45), Expect = 3e-14 Identities = 132/161 (81%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||| ||| ||||||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 606 cggcggcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgc 665 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||| ||||| |||||||| ||||| | |||||| |||||||||| |||||| Sbjct: 666 gtctggctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcg 725 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| || ||| |||||||||| ||||||||||||| Sbjct: 726 ctccgcttcaagggcgccaaggccaagctcaacttccccga 766
>ref|NM_001055715.1| Oryza sativa (japonica cultivar-group) Os03g0183300 (Os03g0183300) mRNA, complete cds Length = 1192 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 373 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 432 Query: 512 ggcac 516 ||||| Sbjct: 433 ggcac 437
>gb|AY831395.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 4 (BIERF4) mRNA, complete cds Length = 1214 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 371 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 430 Query: 512 ggcac 516 ||||| Sbjct: 431 ggcac 435
>gb|BT017632.1| Zea mays clone EL01N0437C06.c mRNA sequence Length = 759 Score = 89.7 bits (45), Expect = 3e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 440 atccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacc 499 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 112 atccggcagcggccgtggggcaagtgggcggcggagatccgcgaccccgtgaagggcgtg 171 Query: 500 cgcgtctggctcggcac 516 ||||||||||||||||| Sbjct: 172 cgcgtctggctcggcac 188
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 89.7 bits (45), Expect = 3e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||| ||| ||||||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 19007005 cggcggcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgc 19006946 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||| ||||| |||||||| ||||| | |||||| |||||||||| |||||| Sbjct: 19006945 gtctggctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcg 19006886 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| || ||| |||||||||| ||||||||||||| Sbjct: 19006885 ctccgcttcaagggcgccaaggccaagctcaacttccccga 19006845 Score = 71.9 bits (36), Expect = 6e-09 Identities = 77/90 (85%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa---gggcacc 499 |||||||| ||||||||||||| |||||||||||||||||||| | || |||| | Sbjct: 26475548 cggcagcggccgtggggcaagttcgcggcggagatccgcgaccccaagaagcggggctcg 26475607 Query: 500 cgcgtctggctcggcacgttcgacacggcc 529 ||||| ||||||||||||| |||||||||| Sbjct: 26475608 cgcgtgtggctcggcacgtacgacacggcc 26475637 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 32223302 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgc 32223247 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 505 ctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||||||||||||||||||| ||||| | |||||| | ||||||||||||||||| Sbjct: 23044438 ctggctcggcacgttcgacaccgccgagcaggccgcctgcgcctacgacgtcgccgc 23044494 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgc 488 |||||||| |||||||||||||||||||||||||||| Sbjct: 32223356 ccgtgggggaagtgggcggcggagatccgcgacccgc 32223320 Score = 63.9 bits (32), Expect = 2e-06 Identities = 122/152 (80%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||||||||||||||||| | |||||| |||| | ||||||||||| Sbjct: 20510854 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 20510795 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| ||| ||| ||||| || || || || |||||||||| |||||| | ||| || Sbjct: 20510794 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 20510735 Query: 572 cgcggcagcaaggccaaggtcaacttccccga 603 ||||| || |||||| ||||||||||||| Sbjct: 20510734 cgcgggcgccgcgccaagctcaacttccccga 20510703 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 26441461 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 26441402 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 26441401 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 26441342 Query: 561 cc 562 || Sbjct: 26441341 cc 26441340 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||||||||||||||||||||||||| | |||||| Sbjct: 20518875 ccgtggggcaagtgggcggcggagatcagggacccg 20518840 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Minus Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| | || || | |||||||| |||||||||| |||||| Sbjct: 3164923 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgc 3164866 Score = 48.1 bits (24), Expect = 0.091 Identities = 51/60 (85%) Strand = Plus / Minus Query: 505 ctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccg 564 |||||| ||||||||||||||||| || || |||||| ||||||||| ||||||||| Sbjct: 18943543 ctggctgggcacgttcgacacggcggaggaggccgccgtcgcctacgaccgcgccgcccg 18943484 Score = 46.1 bits (23), Expect = 0.36 Identities = 35/39 (89%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaag 493 ||||||||||||| | ||||||||||||| |||| |||| Sbjct: 26543474 tggggcaagtgggtgtcggagatccgcgagccgcgcaag 26543512 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tggctcggcacgttcgacacggccga 531 |||||||||||||||||||| ||||| Sbjct: 25615120 tggctcggcacgttcgacaccgccga 25615095 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 gcggcggagatccgcgacccg 487 ||||||||||||||||||||| Sbjct: 4959442 gcggcggagatccgcgacccg 4959422 Score = 42.1 bits (21), Expect = 5.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 ||||| ||||||||||| ||||| || ||||| || ||||| ||||||| Sbjct: 33939188 tggctgggcacgttcgagacggcggaggatgcggcgcgggcgtacgacg 33939140
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 89.7 bits (45), Expect = 3e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||| ||| ||||||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 62326 cggcggcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgc 62267 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||| ||||| |||||||| ||||| | |||||| |||||||||| |||||| Sbjct: 62266 gtctggctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcg 62207 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| || ||| |||||||||| ||||||||||||| Sbjct: 62206 ctccgcttcaagggcgccaaggccaagctcaacttccccga 62166
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 89.7 bits (45), Expect = 3e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||| ||| ||||||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 12526 cggcggcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgc 12467 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 |||||||| ||||| |||||||| ||||| | |||||| |||||||||| |||||| Sbjct: 12466 gtctggctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcg 12407 Query: 563 cgtcgcctccgcggcagcaaggccaaggtcaacttccccga 603 | ||| || ||| |||||||||| ||||||||||||| Sbjct: 12406 ctccgcttcaagggcgccaaggccaagctcaacttccccga 12366
>dbj|AK119553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C04, full insert sequence Length = 1193 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 374 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 433 Query: 512 ggcac 516 ||||| Sbjct: 434 ggcac 438
>dbj|AK106163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B04, full insert sequence Length = 1193 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 374 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 433 Query: 512 ggcac 516 ||||| Sbjct: 434 ggcac 438
>dbj|AK105922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A05, full insert sequence Length = 1190 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 371 ccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctggctc 430 Query: 512 ggcac 516 ||||| Sbjct: 431 ggcac 435
>gb|DQ244273.1| Zea mays clone 4069 mRNA sequence Length = 842 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 470 gcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacggcc 529 |||||||||||||||||| |||| | |||||| ||||||||||||||||||||| || Sbjct: 95 gcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacgccc 154 Query: 530 gatgatgccgcccgggcctacgacgtcgccgc 561 || || ||||| ||||||||||||| |||||| Sbjct: 155 gaggacgccgcgcgggcctacgacgccgccgc 186
>emb|CT830307.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA029B08, full insert sequence Length = 557 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 45 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 104 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 105 tacgagtccatcgacagcctcttcgccg 132 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 170 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 224
>emb|CT832482.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA010C22, full insert sequence Length = 960 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| Sbjct: 227 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 286 Query: 527 gccgatgatgccgcccgggcctacgacg 554 ||||| || ||||| || |||||||||| Sbjct: 287 gccgaggaggccgcgcgcgcctacgacg 314
>ref|NM_001062477.1| Oryza sativa (japonica cultivar-group) Os05g0497300 (Os05g0497300) mRNA, complete cds Length = 1093 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| Sbjct: 255 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 314 Query: 527 gccgatgatgccgcccgggcctacgacg 554 ||||| || ||||| || |||||||||| Sbjct: 315 gccgaggaggccgcgcgcgcctacgacg 342
>gb|AY576527.1| Oryza sativa ethylene-responsive element binding factor (EREBP) mRNA, complete cds Length = 1046 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| Sbjct: 212 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 271 Query: 527 gccgatgatgccgcccgggcctacgacg 554 ||||| || ||||| || |||||||||| Sbjct: 272 gccgaggaggccgcgcgcgcctacgacg 299
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Minus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| Sbjct: 65479 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 65420 Query: 527 gccgatgatgccgcccgggcctacgacg 554 ||||| || ||||| || |||||||||| Sbjct: 65419 gccgaggaggccgcgcgcgcctacgacg 65392
>dbj|AK111755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G02, full insert sequence Length = 1094 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| Sbjct: 256 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 315 Query: 527 gccgatgatgccgcccgggcctacgacg 554 ||||| || ||||| || |||||||||| Sbjct: 316 gccgaggaggccgcgcgcgcctacgacg 343
>dbj|AK060929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-A09, full insert sequence Length = 1195 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 866 ttcaccgacgagcttgggttcgatccattcatgctgttccagctcccctgctcggacacg 925 |||||||||||||| | |||||| || |||||||||||||||||||||| ||| ||| Sbjct: 545 ttcaccgacgagctggagttcgacccgttcatgctgttccagctcccctactccgacggc 604 Query: 926 tatgaatccatcgacagcctcttcgccg 953 || || |||||||||||||||||||||| Sbjct: 605 tacgagtccatcgacagcctcttcgccg 632 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1000 cggcgtcagcctctggagcttcgacgaattccccatggacagcgccattttctga 1054 |||||||| ||| |||||||||||||| ||||| || ||| ||||| |||||||| Sbjct: 670 cggcgtcaacctgtggagcttcgacgacttcccaatcgacggcgcccttttctga 724
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 85.7 bits (43), Expect = 4e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 ||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 180869 cggcatccggcagcggccgtggggcaagtgggtggcggagatccgcgaccc 180919
>emb|CT832402.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116K09, full insert sequence Length = 947 Score = 83.8 bits (42), Expect = 2e-12 Identities = 129/158 (81%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcg 503 ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 291 ggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcg 350 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 ||||||||||||| | | || ||||| | ||||| |||||||||||| |||||| | Sbjct: 351 tctggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 410 Query: 564 gtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 | ||| || | ||| |||||| ||||||||||||||| Sbjct: 411 gccgcatcaggggcgccaaggcgaaggtcaacttcccc 448
>ref|NM_001049403.1| Oryza sativa (japonica cultivar-group) Os01g0313300 (Os01g0313300) mRNA, complete cds Length = 908 Score = 83.8 bits (42), Expect = 2e-12 Identities = 129/158 (81%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcg 503 ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 291 ggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcg 350 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 ||||||||||||| | | || ||||| | ||||| |||||||||||| |||||| | Sbjct: 351 tctggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 410 Query: 564 gtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 | ||| || | ||| |||||| ||||||||||||||| Sbjct: 411 gccgcatcaggggcgccaaggcgaaggtcaacttcccc 448
>gb|DQ011607.1| Oryza sativa (indica cultivar-group) cultivar Teqing clone TQR14A11, complete sequence Length = 100871 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Minus Query: 433 ccacggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa 492 |||||||||||||||||| |||||||| |||| || |||||||||||||||| ||| Sbjct: 50725 ccacggcatccggcagcggccgtgggggcggtggtcgtcggagatccgcgaccccgtcaa 50666 Query: 493 gggcacccgcgtctggctcggcacgttcgacacggccg 530 |||| |||| ||||||||||||| |||||||| |||| Sbjct: 50665 gggcgtccgcctctggctcggcaccttcgacaccgccg 50628
>gb|DQ011598.1| Oryza sativa (indica cultivar-group) cultivar IR40931-26 sub_clone 26D17-13, complete sequence Length = 7355 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Minus Query: 433 ccacggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa 492 |||||||||||||||||| |||||||| |||| || |||||||||||||||| ||| Sbjct: 5391 ccacggcatccggcagcggccgtgggggcggtggtcgtcggagatccgcgaccccgtcaa 5332 Query: 493 gggcacccgcgtctggctcggcacgttcgacacggccg 530 |||| |||| ||||||||||||| |||||||| |||| Sbjct: 5331 gggcgtccgcctctggctcggcaccttcgacaccgccg 5294
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 83.8 bits (42), Expect = 2e-12 Identities = 129/158 (81%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcg 503 ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 106329 ggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcg 106388 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 ||||||||||||| | | || ||||| | ||||| |||||||||||| |||||| | Sbjct: 106389 tctggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 106448 Query: 564 gtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 | ||| || | ||| |||||| ||||||||||||||| Sbjct: 106449 gccgcatcaggggcgccaaggcgaaggtcaacttcccc 106486
>dbj|AK111775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G11, full insert sequence Length = 909 Score = 83.8 bits (42), Expect = 2e-12 Identities = 129/158 (81%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcg 503 ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 292 ggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcg 351 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 ||||||||||||| | | || ||||| | ||||| |||||||||||| |||||| | Sbjct: 352 tctggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 411 Query: 564 gtcgcctccgcggcagcaaggccaaggtcaacttcccc 601 | ||| || | ||| |||||| ||||||||||||||| Sbjct: 412 gccgcatcaggggcgccaaggcgaaggtcaacttcccc 449
>gb|EF061888.1| Oryza sativa (japonica cultivar-group) development related ERF protein (DRE) mRNA, complete cds Length = 1589 Score = 79.8 bits (40), Expect = 3e-11 Identities = 102/122 (83%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||||| ||||| |||| ||| | | Sbjct: 555 ggcagcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgc 614 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||||| ||||| || ||||||| ||| |||||| ||||| Sbjct: 615 gcgtgtggctcggcacgttcgacaccgccgaggacgccgccctggcgtacgaccgcgccg 674 Query: 561 cc 562 || Sbjct: 675 cc 676
>dbj|AK243188.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100039E18, full insert sequence Length = 1533 Score = 79.8 bits (40), Expect = 3e-11 Identities = 102/122 (83%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||||| ||||| |||| ||| | | Sbjct: 549 ggcagcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgc 608 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||||| ||||| || ||||||| ||| |||||| ||||| Sbjct: 609 gcgtgtggctcggcacgttcgacaccgccgaggacgccgccctggcgtacgaccgcgccg 668 Query: 561 cc 562 || Sbjct: 669 cc 670
>ref|NM_001060009.1| Oryza sativa (japonica cultivar-group) Os04g0546800 (Os04g0546800) mRNA, complete cds Length = 957 Score = 79.8 bits (40), Expect = 3e-11 Identities = 102/122 (83%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||||| ||||| |||| ||| | | Sbjct: 470 ggcagcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgc 529 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||||| ||||| || ||||||| ||| |||||| ||||| Sbjct: 530 gcgtgtggctcggcacgttcgacaccgccgaggacgccgccctggcgtacgaccgcgccg 589 Query: 561 cc 562 || Sbjct: 590 cc 591
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 79.8 bits (40), Expect = 3e-11 Identities = 102/122 (83%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||||| ||||| |||| ||| | | Sbjct: 81658 ggcagcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgc 81599 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||||| ||||| || ||||||| ||| |||||| ||||| Sbjct: 81598 gcgtgtggctcggcacgttcgacaccgccgaggacgccgccctggcgtacgaccgcgccg 81539 Query: 561 cc 562 || Sbjct: 81538 cc 81537 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 108082 cggcagcggccgtgggggaagttcgcggcggagatccgcgacccg 108126 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 446 cagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 118901 cagcggccgtgggggaagttcgcggcggagatccgcgacccg 118942
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 79.8 bits (40), Expect = 3e-11 Identities = 102/122 (83%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||||| ||||| |||| ||| | | Sbjct: 27345730 ggcagcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgc 27345671 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||||| ||||| || ||||||| ||| |||||| ||||| Sbjct: 27345670 gcgtgtggctcggcacgttcgacaccgccgaggacgccgccctggcgtacgaccgcgccg 27345611 Query: 561 cc 562 || Sbjct: 27345610 cc 27345609 Score = 61.9 bits (31), Expect = 6e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||| | |||||||||| || | || || |||||| Sbjct: 21257746 ccgtgggggaagtgggcggcggagatcagggacccgcacagggcggcgcgggtgtggctc 21257687 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || ||||||| ||| ||||| || || || || |||||||||| Sbjct: 21257686 gggacgttcgccaccgccgaggacgcggcgcgcgcctacgacg 21257644 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 27373486 cggcagcggccgtgggggaagttcgcggcggagatccgcgacccg 27373530 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| |||||||||||| || ||||||||| | || ||| ||||||| Sbjct: 33065401 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggct 33065345 Score = 54.0 bits (27), Expect = 0.001 Identities = 86/105 (81%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgca---caagggcacccgcgtctgg 508 ||||||||||| | ||||||||||||||||||||| | | ||| | ||||||||| Sbjct: 10369818 ccgtggggcaaattcgcggcggagatccgcgacccggagcgcggcggctcacgcgtctgg 10369759 Query: 509 ctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||||||||| ||||| || ||||| || || |||||| Sbjct: 10369758 cttggcacgttcgacaccgccgaggaggccgcgcgagcgtacgac 10369714 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 446 cagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 27384305 cagcggccgtgggggaagttcgcggcggagatccgcgacccg 27384346 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||| |||||||||| || ||||||||||||||||||||| Sbjct: 30973293 agcgcccgtggggcaggtacgcggcggagatccgcgacccg 30973333 Score = 48.1 bits (24), Expect = 0.091 Identities = 27/28 (96%) Strand = Plus / Plus Query: 504 tctggctcggcacgttcgacacggccga 531 |||||||||||||||||||||| ||||| Sbjct: 27496940 tctggctcggcacgttcgacaccgccga 27496967 Score = 46.1 bits (23), Expect = 0.36 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 580 caaggccaaggtcaacttccccga-cgcggccagggccg 617 |||||||||| ||||||||||||| |||| ||||||||| Sbjct: 19661568 caaggccaagctcaacttccccgagcgcgtccagggccg 19661606 Score = 46.1 bits (23), Expect = 0.36 Identities = 77/95 (81%) Strand = Plus / Minus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 |||||||||||||| |||||| ||| | | ||||| ||||||||||| | |||| | Sbjct: 34168167 gcggcggagatccgggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactcc 34168108 Query: 527 gccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||| | || || |||||||||||||||||||| Sbjct: 34168107 gccgaggccgcggcgcgggcctacgacgtcgccgc 34168073 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 acgcggccagggccggggcgc 623 ||||||||||||||||||||| Sbjct: 30181812 acgcggccagggccggggcgc 30181832
>gb|BT009075.1| Triticum aestivum clone wip1c.pk004.o24:fis, full insert mRNA sequence Length = 1777 Score = 77.8 bits (39), Expect = 1e-10 Identities = 84/99 (84%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| ||| | ||| |||||||| ||||||||||| Sbjct: 843 tggggcaagtgggtggcggagatccgcctcccccgcaaccgcacccgcctctggctcggc 902 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || || |||| ||||||||| Sbjct: 903 accttcgacaccgccgaggaggcggccctcgcctacgac 941
>gb|DQ026517.1| Triticum aestivum dehydration responsive element binding protein (DBP) mRNA, complete cds Length = 1343 Score = 73.8 bits (37), Expect = 2e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| ||||||||||||||| ||||||||| |||| ||| ||||||| Sbjct: 369 gtggggcaagtgggtggcggagatccgcgagccgcacaagcgcacgcgcatctggct 425
>gb|DQ286559.1| Triticum aestivum dehydration responsive element binding protein (DREB2) mRNA, complete cds Length = 1087 Score = 71.9 bits (36), Expect = 6e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 495 gcacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 |||||||| ||||||||||||| |||||||| ||||| || ||||| | ||||||||||| Sbjct: 430 gcacccgcctctggctcggcaccttcgacaccgccgacgaggccgcgctggcctacgacg 489 Query: 555 tcgccgcc 562 ||||||| Sbjct: 490 ccgccgcc 497
>ref|NM_001055510.1| Oryza sativa (japonica cultivar-group) Os03g0150200 (Os03g0150200) mRNA, complete cds Length = 633 Score = 71.9 bits (36), Expect = 6e-09 Identities = 92/110 (83%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc---gcacaagggcacccgcg 503 |||| ||||||||||||| |||||||||||||||||||| || | ||| |||||| Sbjct: 107 agcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcgggggagcccgcg 166 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 | |||||||||||||||||||| || || || ||||| ||||| |||||| Sbjct: 167 tgtggctcggcacgttcgacaccgcggaggaggccgcgcgggcgtacgac 216
>ref|NM_001054752.1| Oryza sativa (japonica cultivar-group) Os02g0764700 (Os02g0764700) mRNA, complete cds Length = 911 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 527 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgc 582 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgc 488 |||||||| |||||||||||||||||||||||||||| Sbjct: 473 ccgtgggggaagtgggcggcggagatccgcgacccgc 509
>ref|NM_001054151.1| Oryza sativa (japonica cultivar-group) Os02g0655200 (Os02g0655200) mRNA, complete cds Length = 1299 Score = 71.9 bits (36), Expect = 6e-09 Identities = 77/90 (85%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa---gggcacc 499 |||||||| ||||||||||||| |||||||||||||||||||| | || |||| | Sbjct: 606 cggcagcggccgtggggcaagttcgcggcggagatccgcgaccccaagaagcggggctcg 665 Query: 500 cgcgtctggctcggcacgttcgacacggcc 529 ||||| ||||||||||||| |||||||||| Sbjct: 666 cgcgtgtggctcggcacgtacgacacggcc 695
>gb|DQ288171.1| Triticum aestivum putative DRE binding factor mRNA, complete cds Length = 929 Score = 71.9 bits (36), Expect = 6e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 495 gcacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 |||||||| ||||||||||||| |||||||| ||||| || ||||| | ||||||||||| Sbjct: 456 gcacccgcctctggctcggcaccttcgacaccgccgacgaggccgcgctggcctacgacg 515 Query: 555 tcgccgcc 562 ||||||| Sbjct: 516 ccgccgcc 523
>gb|DQ021908.1| Triticum aestivum DRE binding factor (DBF) mRNA, complete cds Length = 999 Score = 71.9 bits (36), Expect = 6e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 495 gcacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 |||||||| ||||||||||||| |||||||| ||||| || ||||| | ||||||||||| Sbjct: 455 gcacccgcctctggctcggcaccttcgacaccgccgacgaggccgcgctggcctacgacg 514 Query: 555 tcgccgcc 562 ||||||| Sbjct: 515 ccgccgcc 522
>gb|AY339378.1| Oryza sativa (japonica cultivar-group) Ap25 mRNA, complete cds Length = 1312 Score = 71.9 bits (36), Expect = 6e-09 Identities = 77/90 (85%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa---gggcacc 499 |||||||| ||||||||||||| |||||||||||||||||||| | || |||| | Sbjct: 606 cggcagcggccgtggggcaagttcgcggcggagatccgcgaccccaagaagcggggctcg 665 Query: 500 cgcgtctggctcggcacgttcgacacggcc 529 ||||| ||||||||||||| |||||||||| Sbjct: 666 cgcgtgtggctcggcacgtacgacacggcc 695
>gb|AY339376.1| Oryza sativa (japonica cultivar-group) Ap23 mRNA, complete cds Length = 660 Score = 71.9 bits (36), Expect = 6e-09 Identities = 92/110 (83%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc---gcacaagggcacccgcg 503 |||| ||||||||||||| |||||||||||||||||||| || | ||| |||||| Sbjct: 107 agcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcgggggagcccgcg 166 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 | |||||||||||||||||||| || || || ||||| ||||| |||||| Sbjct: 167 tgtggctcggcacgttcgacaccgcggaggaggccgcgcgggcgtacgac 216
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 67315 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgc 67260 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgc 488 |||||||| |||||||||||||||||||||||||||| Sbjct: 67369 ccgtgggggaagtgggcggcggagatccgcgacccgc 67333
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 71.9 bits (36), Expect = 6e-09 Identities = 77/90 (85%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa---gggcacc 499 |||||||| ||||||||||||| |||||||||||||||||||| | || |||| | Sbjct: 75464 cggcagcggccgtggggcaagttcgcggcggagatccgcgaccccaagaagcggggctcg 75523 Query: 500 cgcgtctggctcggcacgttcgacacggcc 529 ||||| ||||||||||||| |||||||||| Sbjct: 75524 cgcgtgtggctcggcacgtacgacacggcc 75553 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 41377 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 41318 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 41317 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 41258 Query: 561 cc 562 || Sbjct: 41257 cc 41256
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 71.9 bits (36), Expect = 6e-09 Identities = 77/90 (85%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa---gggcacc 499 |||||||| ||||||||||||| |||||||||||||||||||| | || |||| | Sbjct: 17929 cggcagcggccgtggggcaagttcgcggcggagatccgcgaccccaagaagcggggctcg 17988 Query: 500 cgcgtctggctcggcacgttcgacacggcc 529 ||||| ||||||||||||| |||||||||| Sbjct: 17989 cgcgtgtggctcggcacgtacgacacggcc 18018 Score = 46.1 bits (23), Expect = 0.36 Identities = 35/39 (89%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaag 493 ||||||||||||| | ||||||||||||| |||| |||| Sbjct: 85855 tggggcaagtgggtgtcggagatccgcgagccgcgcaag 85893
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 71.9 bits (36), Expect = 6e-09 Identities = 92/110 (83%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc---gcacaagggcacccgcg 503 |||| ||||||||||||| |||||||||||||||||||| || | ||| |||||| Sbjct: 54028 agcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcgggggagcccgcg 54087 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 | |||||||||||||||||||| || || || ||||| ||||| |||||| Sbjct: 54088 tgtggctcggcacgttcgacaccgcggaggaggccgcgcgggcgtacgac 54137
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 71.9 bits (36), Expect = 6e-09 Identities = 92/110 (83%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc---gcacaagggcacccgcg 503 |||| ||||||||||||| |||||||||||||||||||| || | ||| |||||| Sbjct: 126992 agcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcgggggagcccgcg 127051 Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 | |||||||||||||||||||| || || || ||||| ||||| |||||| Sbjct: 127052 tgtggctcggcacgttcgacaccgcggaggaggccgcgcgggcgtacgac 127101
>dbj|AK107146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-D09, full insert sequence Length = 911 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 527 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgc 582 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgc 488 |||||||| |||||||||||||||||||||||||||| Sbjct: 473 ccgtgggggaagtgggcggcggagatccgcgacccgc 509
>gb|AY781345.1| Triticum aestivum DREB2 (DREB2) mRNA, complete cds Length = 847 Score = 71.9 bits (36), Expect = 6e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 495 gcacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 |||||||| ||||||||||||| |||||||| ||||| || ||||| | ||||||||||| Sbjct: 190 gcacccgcctctggctcggcaccttcgacaccgccgacgaggccgcgctggcctacgacg 249 Query: 555 tcgccgcc 562 ||||||| Sbjct: 250 ccgccgcc 257
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 71.9 bits (36), Expect = 6e-09 Identities = 77/90 (85%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaa---gggcacc 499 |||||||| ||||||||||||| |||||||||||||||||||| | || |||| | Sbjct: 181242 cggcagcggccgtggggcaagttcgcggcggagatccgcgaccccaagaagcggggctcg 181301 Query: 500 cgcgtctggctcggcacgttcgacacggcc 529 ||||| ||||||||||||| |||||||||| Sbjct: 181302 cgcgtgtggctcggcacgtacgacacggcc 181331 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 160208 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 160149 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 160148 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 160089 Query: 561 cc 562 || Sbjct: 160088 cc 160087 Score = 46.1 bits (23), Expect = 0.36 Identities = 35/39 (89%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaag 493 ||||||||||||| | ||||||||||||| |||| |||| Sbjct: 249067 tggggcaagtgggtgtcggagatccgcgagccgcgcaag 249105
>dbj|AK241243.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065128M14, full insert sequence Length = 1326 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 471 tggggcaagtgggtggcggagatccgcctgccgcgcaaccgcacccgcctctggctgggc 530 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || ||||| | ||| |||||| Sbjct: 531 accttcgacaccgccgaggaggccgcgctggcgtacgac 569
>ref|NM_001073675.1| Oryza sativa (japonica cultivar-group) Os12g0582900 (Os12g0582900) mRNA, complete cds Length = 1427 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 |||||| ||||||||||| |||||||| ||||| || |||||||| |||||||||| || Sbjct: 265 ccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggc 324 Query: 559 cgcccgtcgcctccgcggc 577 |||| | | |||||||||| Sbjct: 325 cgcctgcctcctccgcggc 343
>ref|NM_001055770.1| Oryza sativa (japonica cultivar-group) Os03g0191900 (Os03g0191900) mRNA, complete cds Length = 894 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 358 tggggcaagtgggtggcggagatccgcctgccgcgcaaccgcacccgcctctggctgggc 417 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || ||||| | ||| |||||| Sbjct: 418 accttcgacaccgccgaggaggccgcgctggcgtacgac 456
>gb|BT017785.1| Zea mays clone EL01N0503H11.c mRNA sequence Length = 1086 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| ||| | ||| || ||||||||||| | ||||||| Sbjct: 239 gcggcggagatccgcgacccggcgaagaagagccgggtgtggctcggcacctacgacacg 298 Query: 527 gccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||| || ||||| ||||||||||||| |||||| Sbjct: 299 gccgaggacgccgcgcgggcctacgacgccgccgc 333
>gb|AY125490.1| Zea mays AP2 domain transcription factor (abi4) gene, complete cds Length = 3641 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||||| |||| ||| || ||||| ||||||||| Sbjct: 2669 tggggcaagtgggtggcggagatccgcgagccgcggaagcgctcccgcaagtggctcggc 2728 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||| ||| ||||| || ||||| || ||||||||| Sbjct: 2729 accttcgccaccgccgaggacgccgcgcgcgcctacgac 2767
>gb|BT009243.1| Triticum aestivum clone wlk1.pk0014.f4:fis, full insert mRNA sequence Length = 1261 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| ||| | ||| |||||||| ||||||| ||| Sbjct: 333 tggggcaagtgggtggcggagatccgcctcccccgcaaccgcacccgcctctggctaggc 392 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || || |||| ||||||||| Sbjct: 393 accttcgacaccgccgaggaggcggccctcgcctacgac 431
>gb|BT008937.1| Triticum aestivum clone wdi1c.pk004.g19:fis, full insert mRNA sequence Length = 1771 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| ||| | ||| |||||||| ||||||| ||| Sbjct: 789 tggggcaagtgggtggcggagatccgcctcccccgcaaccgcacccgcctctggctaggc 848 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || || |||| ||||||||| Sbjct: 849 accttcgacaccgccgaggaggcggccctcgcctacgac 887
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| ||||||||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 72680 tggggcaagtgggtggcggagatccgcctgccgcgcaaccgcacccgcctctggctgggc 72739 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || ||||| | ||| |||||| Sbjct: 72740 accttcgacaccgccgaggaggccgcgctggcgtacgac 72778
>gb|BT023988.1| Zea mays clone EL01N0413B03 mRNA sequence Length = 1494 Score = 69.9 bits (35), Expect = 2e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 362 tggggcaagtgggtggcggagatccggctcccgcgcaaccgcacccggctctggctcggc 421 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||| ||||| || || || | |||||||||| Sbjct: 422 accttcgacaccgccgaggaggcggcgctggcctacgac 460
>dbj|AK109606.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F03, full insert sequence Length = 1427 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 |||||| ||||||||||| |||||||| ||||| || |||||||| |||||||||| || Sbjct: 265 ccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggc 324 Query: 559 cgcccgtcgcctccgcggc 577 |||| | | |||||||||| Sbjct: 325 cgcctgcctcctccgcggc 343
>gb|AY106969.1| Zea mays PCO114516 mRNA sequence Length = 950 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 467 gcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggcacgttcgacacg 526 ||||||||||||||||||||| ||| | ||| || ||||||||||| | ||||||| Sbjct: 90 gcggcggagatccgcgacccggcgaagaagagccgggtgtggctcggcacctacgacacg 149 Query: 527 gccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||| || ||||| ||||||||||||| |||||| Sbjct: 150 gccgaggacgccgcgcgggcctacgacgccgccgc 184
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 |||||| ||||||||||| |||||||| ||||| || |||||||| |||||||||| || Sbjct: 121343 ccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggc 121402 Query: 559 cgcccgtcgcctccgcggc 577 |||| | | |||||||||| Sbjct: 121403 cgcctgcctcctccgcggc 121421
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 |||||| ||||||||||| |||||||| ||||| || |||||||| |||||||||| || Sbjct: 13426 ccgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggc 13485 Query: 559 cgcccgtcgcctccgcggc 577 |||| | | |||||||||| Sbjct: 13486 cgcctgcctcctccgcggc 13504
>emb|CT833261.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126F17, full insert sequence Length = 1330 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 536 gccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaac 595 ||||| || |||||||||| ||||||||| |||||||||||| |||||||||| |||| Sbjct: 559 gccgcgcgcgcctacgacgccgccgcccgccgcctccgcggcgccaaggccaagcccaac 618 Query: 596 ttcccc 601 |||||| Sbjct: 619 ttcccc 624 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| |||||||| |||||||||||||||||||||||||| Sbjct: 470 agcggccgtgggggaagtgggcggcggagatccgcgaccc 509
>emb|CT833260.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123I24, full insert sequence Length = 1256 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 536 gccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaac 595 ||||| || |||||||||| ||||||||| |||||||||||| |||||||||| |||| Sbjct: 454 gccgcgcgcgcctacgacgccgccgcccgccgcctccgcggcgccaaggccaagcccaac 513 Query: 596 ttcccc 601 |||||| Sbjct: 514 ttcccc 519 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| |||||||| |||||||||||||||||||||||||| Sbjct: 365 agcggccgtgggggaagtgggcggcggagatccgcgaccc 404
>ref|NM_001071041.1| Oryza sativa (japonica cultivar-group) Os10g0390800 (Os10g0390800) mRNA, complete cds Length = 1260 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 536 gccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaac 595 ||||| || |||||||||| ||||||||| |||||||||||| |||||||||| |||| Sbjct: 458 gccgcgcgcgcctacgacgccgccgcccgccgcctccgcggcgccaaggccaagcccaac 517 Query: 596 ttcccc 601 |||||| Sbjct: 518 ttcccc 523 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| |||||||| |||||||||||||||||||||||||| Sbjct: 369 agcggccgtgggggaagtgggcggcggagatccgcgaccc 408
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 536 gccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaac 595 ||||| || |||||||||| ||||||||| |||||||||||| |||||||||| |||| Sbjct: 28161 gccgcgcgcgcctacgacgccgccgcccgccgcctccgcggcgccaaggccaagcccaac 28102 Query: 596 ttcccc 601 |||||| Sbjct: 28101 ttcccc 28096 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| |||||||| |||||||||||||||||||||||||| Sbjct: 28250 agcggccgtgggggaagtgggcggcggagatccgcgaccc 28211
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 536 gccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaac 595 ||||| || |||||||||| ||||||||| |||||||||||| |||||||||| |||| Sbjct: 12476014 gccgcgcgcgcctacgacgccgccgcccgccgcctccgcggcgccaaggccaagcccaac 12476073 Query: 596 ttcccc 601 |||||| Sbjct: 12476074 ttcccc 12476079 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| |||||||| |||||||||||||||||||||||||| Sbjct: 12475925 agcggccgtgggggaagtgggcggcggagatccgcgaccc 12475964 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 21693908 cggcagcggccgtggggcaagtacgcggcggagatccgggacccg 21693952 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||||||||||| ||||||||||||||||||||| Sbjct: 15550001 ccgtggggcaagttcgcggcggagatccgcgacccg 15549966 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Minus Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 ||||||||||||||||| |||||||| ||||| || || || || ||||||||| Sbjct: 15549950 cgcgtctggctcggcaccttcgacaccgccgaggaggcggcgcgtgcctacgac 15549897
>dbj|AK110269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C07, full insert sequence Length = 1260 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 536 gccgcccgggcctacgacgtcgccgcccgtcgcctccgcggcagcaaggccaaggtcaac 595 ||||| || |||||||||| ||||||||| |||||||||||| |||||||||| |||| Sbjct: 458 gccgcgcgcgcctacgacgccgccgcccgccgcctccgcggcgccaaggccaagcccaac 517 Query: 596 ttcccc 601 |||||| Sbjct: 518 ttcccc 523 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| |||||||| |||||||||||||||||||||||||| Sbjct: 369 agcggccgtgggggaagtgggcggcggagatccgcgaccc 408
>ref|NM_001053840.1| Oryza sativa (japonica cultivar-group) Os02g0594300 (Os02g0594300) mRNA, complete cds Length = 1038 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 505 ctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||||||||||||||||||| ||||| | |||||| | ||||||||||||||||| Sbjct: 249 ctggctcggcacgttcgacaccgccgagcaggccgcctgcgcctacgacgtcgccgc 305
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 505 ctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||||||||||||||||||| ||||| | |||||| | ||||||||||||||||| Sbjct: 68835 ctggctcggcacgttcgacaccgccgagcaggccgcctgcgcctacgacgtcgccgc 68891
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 65.9 bits (33), Expect = 4e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 505 ctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 ||||||||||||||||||||| ||||| | |||||| | ||||||||||||||||| Sbjct: 11476 ctggctcggcacgttcgacaccgccgagcaggccgcctgcgcctacgacgtcgccgc 11532
>ref|NM_001054149.1| Oryza sativa (japonica cultivar-group) Os02g0654700 (Os02g0654700) mRNA, complete cds Length = 1299 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 518 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 577 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 578 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 637 Query: 561 cc 562 || Sbjct: 638 cc 639
>ref|NM_001053616.1| Oryza sativa (japonica cultivar-group) Os02g0546600 (Os02g0546600) mRNA, partial cds Length = 992 Score = 63.9 bits (32), Expect = 2e-06 Identities = 122/152 (80%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||||||||||||||||| | |||||| |||| | ||||||||||| Sbjct: 399 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 458 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| ||| ||| ||||| || || || || |||||||||| |||||| | ||| || Sbjct: 459 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 518 Query: 572 cgcggcagcaaggccaaggtcaacttccccga 603 ||||| || |||||| ||||||||||||| Sbjct: 519 cgcgggcgccgcgccaagctcaacttccccga 550
>gb|AY831394.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 3 (BIERF3) mRNA, complete cds Length = 1199 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 519 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 578 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 579 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 638 Query: 561 cc 562 || Sbjct: 639 cc 640
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 63.9 bits (32), Expect = 2e-06 Identities = 122/152 (80%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||||||||||||||||| | |||||| |||| | ||||||||||| Sbjct: 6412 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 6353 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| ||| ||| ||||| || || || || |||||||||| |||||| | ||| || Sbjct: 6352 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 6293 Query: 572 cgcggcagcaaggccaaggtcaacttccccga 603 ||||| || |||||| ||||||||||||| Sbjct: 6292 cgcgggcgccgcgccaagctcaacttccccga 6261 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||||||||||||||||||||||||| | |||||| Sbjct: 14433 ccgtggggcaagtgggcggcggagatcagggacccg 14398
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 63.9 bits (32), Expect = 2e-06 Identities = 122/152 (80%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||||||||||||||||| | |||||| |||| | ||||||||||| Sbjct: 153278 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 153219 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| ||| ||| ||||| || || || || |||||||||| |||||| | ||| || Sbjct: 153218 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 153159 Query: 572 cgcggcagcaaggccaaggtcaacttccccga 603 ||||| || |||||| ||||||||||||| Sbjct: 153158 cgcgggcgccgcgccaagctcaacttccccga 153127
>dbj|AK107852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A10, full insert sequence Length = 992 Score = 63.9 bits (32), Expect = 2e-06 Identities = 122/152 (80%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||||||||||||||||| | |||||| |||| | ||||||||||| Sbjct: 399 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 458 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtcgcctc 571 ||||| ||| ||| ||||| || || || || |||||||||| |||||| | ||| || Sbjct: 459 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 518 Query: 572 cgcggcagcaaggccaaggtcaacttccccga 603 ||||| || |||||| ||||||||||||| Sbjct: 519 cgcgggcgccgcgccaagctcaacttccccga 550
>dbj|AK105940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B11, full insert sequence Length = 1209 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 518 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 577 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 578 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 637 Query: 561 cc 562 || Sbjct: 638 cc 639
>dbj|AK073812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068P11, full insert sequence Length = 1302 Score = 63.9 bits (32), Expect = 2e-06 Identities = 100/122 (81%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaag---ggcaccc 500 ||||||| ||||||||||||| |||||||||||| | |||||| |||| ||| | | Sbjct: 519 ggcagcggccgtggggcaagttcgcggcggagatcagggacccggccaagaacggcgcgc 578 Query: 501 gcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccg 560 |||| |||||||||||||||||| | ||||| || |||||| ||| |||||| ||||| Sbjct: 579 gcgtgtggctcggcacgttcgactccgccgaggaggccgccgtggcgtacgaccgcgccg 638 Query: 561 cc 562 || Sbjct: 639 cc 640
>ref|NM_001069070.1| Oryza sativa (japonica cultivar-group) Os08g0565200 (Os08g0565200) mRNA, complete cds Length = 1151 Score = 61.9 bits (31), Expect = 6e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| | ||||||||||||| ||| ||||||||||| || || || Sbjct: 199 cggcgtccggcagcgcacctggggcaagtgggtggccgagatccgcgagcccaaccgcgg 258 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||||| ||| |||| ||| || |||||||| ||||||||| Sbjct: 259 cgcccgcctctggctcggcaccttcaacaccgccctcgacgccgcccgcgcctacgactc 318 Query: 556 cgccgcc 562 ||||||| Sbjct: 319 cgccgcc 325
>ref|NM_001059341.1| Oryza sativa (japonica cultivar-group) Os04g0429000 (Os04g0429000) mRNA, complete cds Length = 873 Score = 61.9 bits (31), Expect = 6e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||| | |||||||||| || | || || |||||| Sbjct: 477 ccgtgggggaagtgggcggcggagatcagggacccgcacagggcggcgcgggtgtggctc 418 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || ||||||| ||| ||||| || || || || |||||||||| Sbjct: 417 gggacgttcgccaccgccgaggacgcggcgcgcgcctacgacg 375
>gb|AY339375.1| Oryza sativa (japonica cultivar-group) Ap22 mRNA, complete cds Length = 804 Score = 61.9 bits (31), Expect = 6e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| | ||||||||||||| ||| ||||||||||| || || || Sbjct: 225 cggcgtccggcagcgcacctggggcaagtgggtggccgagatccgcgagcccaaccgcgg 284 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||||| ||| |||| ||| || |||||||| ||||||||| Sbjct: 285 cgcccgcctctggctcggcaccttcaacaccgccctcgacgccgcccgcgcctacgactc 344 Query: 556 cgccgcc 562 ||||||| Sbjct: 345 cgccgcc 351
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 61.9 bits (31), Expect = 6e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 |||||||| |||||||||||||||||| | |||||||||| || | || || |||||| Sbjct: 71220 ccgtgggggaagtgggcggcggagatcagggacccgcacagggcggcgcgggtgtggctc 71161 Query: 512 ggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 || ||||||| ||| ||||| || || || || |||||||||| Sbjct: 71160 gggacgttcgccaccgccgaggacgcggcgcgcgcctacgacg 71118
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 61.9 bits (31), Expect = 6e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| | ||||||||||||| ||| ||||||||||| || || || Sbjct: 43733 cggcgtccggcagcgcacctggggcaagtgggtggccgagatccgcgagcccaaccgcgg 43674 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||||| ||| |||| ||| || |||||||| ||||||||| Sbjct: 43673 cgcccgcctctggctcggcaccttcaacaccgccctcgacgccgcccgcgcctacgactc 43614 Query: 556 cgccgcc 562 ||||||| Sbjct: 43613 cgccgcc 43607
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 61.9 bits (31), Expect = 6e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| | ||||||||||||| ||| ||||||||||| || || || Sbjct: 106742 cggcgtccggcagcgcacctggggcaagtgggtggccgagatccgcgagcccaaccgcgg 106683 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||||| ||| |||| ||| || |||||||| ||||||||| Sbjct: 106682 cgcccgcctctggctcggcaccttcaacaccgccctcgacgccgcccgcgcctacgactc 106623 Query: 556 cgccgcc 562 ||||||| Sbjct: 106622 cgccgcc 106616
>dbj|AK108143.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E11, full insert sequence Length = 1151 Score = 61.9 bits (31), Expect = 6e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| |||||||||| | ||||||||||||| ||| ||||||||||| || || || Sbjct: 199 cggcgtccggcagcgcacctggggcaagtgggtggccgagatccgcgagcccaaccgcgg 258 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||||| ||| |||| ||| || |||||||| ||||||||| Sbjct: 259 cgcccgcctctggctcggcaccttcaacaccgccctcgacgccgcccgcgcctacgactc 318 Query: 556 cgccgcc 562 ||||||| Sbjct: 319 cgccgcc 325
>gb|BT016869.1| Zea mays clone Contig702 mRNA sequence Length = 1808 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 454 gtggggcaagtgggcggcggagatccgcgacccg 487 |||||||||||||||||||||||||||| ||||| Sbjct: 996 gtggggcaagtgggcggcggagatccgcaacccg 963
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 60.0 bits (30), Expect = 2e-05 Identities = 105/130 (80%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtct 506 |||| |||||||| |||| | |||||||||||||| |||| || || | ||||| | Sbjct: 3067077 agcggccgtgggggaagtacggggcggagatccgcgtgtcgcagcagagcgcgcgcgtgt 3067136 Query: 507 ggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtc 566 ||||||||||||||||||| ||||| || ||||| |||| |||||| |||||||| | Sbjct: 3067137 ggctcggcacgttcgacaccgccgaggaggccgcgcgggtgtacgaccacgccgccctcc 3067196 Query: 567 gcctccgcgg 576 |||| ||||| Sbjct: 3067197 gcctgcgcgg 3067206 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccg 480 |||| ||||| |||||| |||||||||||||||||||| Sbjct: 5008980 cggctgcgtcagtgggggaagtgggcggcggagatccg 5009017 Score = 48.1 bits (24), Expect = 0.091 Identities = 54/64 (84%) Strand = Plus / Plus Query: 498 cccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcg 557 ||||| ||||||||||||| |||| ||| ||||| | ||||| || ||| ||||||||| Sbjct: 1433967 cccgcatctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcg 1434026 Query: 558 ccgc 561 |||| Sbjct: 1434027 ccgc 1434030 Score = 48.1 bits (24), Expect = 0.091 Identities = 36/40 (90%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaag 493 |||||| ||||||| ||||||||||||||| ||| ||||| Sbjct: 3336309 gtgggggaagtgggtggcggagatccgcgagccgaacaag 3336348
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 60.0 bits (30), Expect = 2e-05 Identities = 105/130 (80%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtct 506 |||| |||||||| |||| | |||||||||||||| |||| || || | ||||| | Sbjct: 21262 agcggccgtgggggaagtacggggcggagatccgcgtgtcgcagcagagcgcgcgcgtgt 21321 Query: 507 ggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtc 566 ||||||||||||||||||| ||||| || ||||| |||| |||||| |||||||| | Sbjct: 21322 ggctcggcacgttcgacaccgccgaggaggccgcgcgggtgtacgaccacgccgccctcc 21381 Query: 567 gcctccgcgg 576 |||| ||||| Sbjct: 21382 gcctgcgcgg 21391
>gb|U91982.1|SHU91982 Stylosanthes hamata EREBP-3 homolog mRNA, complete cds Length = 1003 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 ||||||||||||||| || |||||||| ||||| ||||| || || || ||||||| ||| Sbjct: 182 ccgcgtctggctcggaaccttcgacaccgccgaggatgcagcgcgtgcatacgacgccgc 241 Query: 559 cgcccg 564 |||||| Sbjct: 242 cgcccg 247
>gb|U91857.1|SHU91857 Stylosanthes hamata ethylene-responsive element binding protein homolog gene, complete cds Length = 1018 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgc 558 |||||||||||||||||| |||||||| ||||| || || || || || ||||||| ||| Sbjct: 212 ccgcgtctggctcggcaccttcgacaccgccgaggacgcagcgcgtgcatacgacgccgc 271 Query: 559 cgcccg 564 |||||| Sbjct: 272 cgcccg 277
>ref|NM_001071928.1| Oryza sativa (japonica cultivar-group) Os10g0562900 (Os10g0562900) mRNA, complete cds Length = 1145 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 373 cggcagcggccgtggggcaagtacgcggcggagatccgggacccg 417
>ref|NM_001060614.1| Oryza sativa (japonica cultivar-group) Os04g0648900 (Os04g0648900) mRNA, complete cds Length = 1215 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| |||||||||||| || ||||||||| | || ||| ||||||| Sbjct: 323 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggct 379
>ref|NM_001050295.1| Oryza sativa (japonica cultivar-group) Os01g0657400 (Os01g0657400) mRNA, complete cds Length = 1076 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 346 ccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgtgcgcgtctggctc 405 Query: 512 ggcacgttcgacacggccgatgatgccgc 540 ||||| |||||||| ||||| || ||||| Sbjct: 406 ggcaccttcgacaccgccgaggaggccgc 434
>ref|NM_001048461.1| Oryza sativa (japonica cultivar-group) Os01g0131600 (Os01g0131600) mRNA, complete cds Length = 1871 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 858 gtggggcaagtgggcggcggagatccgcaaccc 890
>emb|CT989143.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 871 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 |||||| ||||||||||||| ||||||||||| || || ||||||| ||||||||| Sbjct: 66 acccgcctctggctcggcaccttcgacacggctgaggaagccgccctcgcctacgac 122
>emb|CT989102.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 720 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 |||||| ||||||||||||| ||||||||||| || || ||||||| ||||||||| Sbjct: 66 acccgcctctggctcggcaccttcgacacggctgaggaagccgccctcgcctacgac 122
>emb|CT989095.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 866 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 |||||| ||||||||||||| ||||||||||| || || ||||||| ||||||||| Sbjct: 66 acccgcctctggctcggcaccttcgacacggctgaggaagccgccctcgcctacgac 122
>emb|CT988846.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 850 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 |||||| ||||||||||||| ||||||||||| || || ||||||| ||||||||| Sbjct: 66 acccgcctctggctcggcaccttcgacacggctgaggaagccgccctcgcctacgac 122
>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete sequence Length = 43586 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| |||||||||||| || ||||||||| | || ||| ||||||| Sbjct: 3992 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggct 3936
>gb|AY341828.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP210 mRNA, complete cds Length = 1279 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 400 gtggggcaagtgggcggcggagatccgcaaccc 432
>gb|AY341826.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP28 mRNA, complete cds Length = 1145 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 373 cggcagcggccgtggggcaagtacgcggcggagatccgggacccg 417
>gb|AY339377.1| Oryza sativa (japonica cultivar-group) Ap24 mRNA, complete cds Length = 1089 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 348 ccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgtgcgcgtctggctc 407 Query: 512 ggcacgttcgacacggccgatgatgccgc 540 ||||| |||||||| ||||| || ||||| Sbjct: 408 ggcaccttcgacaccgccgaggaggccgc 436
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 567 gcctccgcggcagcaaggccaaggtcaacttcc 599 |||||||||||||| |||||||||||||||||| Sbjct: 11676 gcctccgcggcagcgaggccaaggtcaacttcc 11644
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 125812 cggcagcggccgtggggcaagtacgcggcggagatccgggacccg 125856
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 8591 cggcagcggccgtggggcaagtacgcggcggagatccgggacccg 8635
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 24640 cggcagcggccgtgggggaagttcgcggcggagatccgcgacccg 24684 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 446 cagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 35459 cagcggccgtgggggaagttcgcggcggagatccgcgacccg 35500
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 58.0 bits (29), Expect = 9e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctc 511 ||||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 75148 ccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgtgcgcgtctggctc 75089 Query: 512 ggcacgttcgacacggccgatgatgccgc 540 ||||| |||||||| ||||| || ||||| Sbjct: 75088 ggcaccttcgacaccgccgaggaggccgc 75060
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 88799 gtggggcaagtgggcggcggagatccgcaaccc 88831
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 567 gcctccgcggcagcaaggccaaggtcaacttcc 599 |||||||||||||| |||||||||||||||||| Sbjct: 146641 gcctccgcggcagcgaggccaaggtcaacttcc 146609
>dbj|AK119645.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G05, full insert sequence Length = 1850 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 863 gtggggcaagtgggcggcggagatccgcaaccc 895
>dbj|AK102277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D21, full insert sequence Length = 1772 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 864 gtggggcaagtgggcggcggagatccgcaaccc 896
>dbj|AK101133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F23, full insert sequence Length = 1874 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 859 gtggggcaagtgggcggcggagatccgcaaccc 891
>dbj|AK099333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003O11, full insert sequence Length = 1173 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| |||||||||||| || ||||||||| | || ||| ||||||| Sbjct: 292 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggct 348
>dbj|AK062063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D02, full insert sequence Length = 1375 Score = 58.0 bits (29), Expect = 9e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgaccc 486 |||||||||||||||||||||||||||| |||| Sbjct: 287 gtggggcaagtgggcggcggagatccgcaaccc 319
>dbj|AK061095.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A04, full insert sequence Length = 1216 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| |||||||||||| || ||||||||| | || ||| ||||||| Sbjct: 323 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggct 379
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggct 510 |||||||||||||| |||||||||||| || ||||||||| | || ||| ||||||| Sbjct: 74982 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggct 74926
>ref|NM_001068561.1| Oryza sativa (japonica cultivar-group) Os08g0474000 (Os08g0474000) mRNA, partial cds Length = 834 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 240 cggcagcggccatgggggaagtgggctgcggagatccgcgaccc 283 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 ||||| || ||||||||||| ||||| || |||||| |||| |||||| ||||||| Sbjct: 303 tggctggggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgcc 359
>ref|NM_001065752.1| Oryza sativa (japonica cultivar-group) Os07g0227600 (Os07g0227600) mRNA, complete cds Length = 849 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| ||| |||||||| | |||||||||||||||||||||||| Sbjct: 193 cggcggcggccgtgggggaggtgggcggcggagatccgcgaccc 236 Score = 44.1 bits (22), Expect = 1.4 Identities = 64/78 (82%) Strand = Plus / Plus Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||||| |||| Sbjct: 253 cgcgtgtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 312 Query: 560 gcccgtcgcctccgcggc 577 || |||||||||||| Sbjct: 313 tgcctccgcctccgcggc 330
>gb|DQ403725.1| Sorghum bicolor DRE-binding protein 2 (DREB2) mRNA, complete cds Length = 1564 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcga 483 ||||||| ||||||||||||||| ||||||||||||||| Sbjct: 763 ggcagcggacgtggggcaagtgggtggcggagatccgcga 802
>gb|BT018001.1| Zea mays clone EL01N0526G07.c mRNA sequence Length = 1002 Score = 56.0 bits (28), Expect = 4e-04 Identities = 136/172 (79%) Strand = Plus / Plus Query: 436 cggcatccggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaaggg 495 |||| ||||| |||| |||||||||| || |||||||||||||| |||||| || | Sbjct: 139 cggcgtccggaagcgcccgtggggcaggttcgcggcggagatccgggacccggccaggaa 198 Query: 496 cacccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgt 555 | ||||| ||||||||||| |||||||| ||||| | || || || |||||||||| Sbjct: 199 ggcgcgcgtgtggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacgc 258 Query: 556 cgccgcccgtcgcctccgcggcagcaaggccaaggtcaacttccccgacgcg 607 |||||| | | | ||||||| |||||||||| ||||||||||| |||| Sbjct: 259 cgccgcgctccacttccgcgggcccaaggccaagaccaacttccccgtcgcg 310
>gb|AY323486.1| Oryza sativa (japonica cultivar-group) TSI-1-like protein (si1) mRNA, complete cds Length = 968 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||||||||||| ||||||||||||||||||||| Sbjct: 357 ccgtggggcaagttcgcggcggagatccgcgacccg 392
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||||||||||| ||||||||||||||||||||| Sbjct: 37367 ccgtggggcaagttcgcggcggagatccgcgacccg 37332 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Minus Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 ||||||||||||||||| |||||||| ||||| || || || || ||||||||| Sbjct: 37316 cgcgtctggctcggcaccttcgacaccgccgaggaggcggcgcgtgcctacgac 37263
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 28938 cggcagcggccatgggggaagtgggctgcggagatccgcgaccc 28981 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 ||||| || ||||||||||| ||||| || |||||| |||| |||||| ||||||| Sbjct: 29001 tggctggggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgcc 29057
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| ||| |||||||| | |||||||||||||||||||||||| Sbjct: 13223 cggcggcggccgtgggggaggtgggcggcggagatccgcgaccc 13180 Score = 44.1 bits (22), Expect = 1.4 Identities = 64/78 (82%) Strand = Plus / Minus Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||||| |||| Sbjct: 13163 cgcgtgtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 13104 Query: 560 gcccgtcgcctccgcggc 577 || |||||||||||| Sbjct: 13103 tgcctccgcctccgcggc 13086
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||| ||| |||||||| | |||||||||||||||||||||||| Sbjct: 199428 cggcggcggccgtgggggaggtgggcggcggagatccgcgaccc 199385 Score = 44.1 bits (22), Expect = 1.4 Identities = 64/78 (82%) Strand = Plus / Minus Query: 500 cgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgcc 559 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||||| |||| Sbjct: 199368 cgcgtgtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 199309 Query: 560 gcccgtcgcctccgcggc 577 || |||||||||||| Sbjct: 199308 tgcctccgcctccgcggc 199291
>dbj|AK062882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D06, full insert sequence Length = 834 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 240 cggcagcggccatgggggaagtgggctgcggagatccgcgaccc 283 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcc 562 ||||| || ||||||||||| ||||| || |||||| |||| |||||| ||||||| Sbjct: 303 tggctggggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgcc 359
>ref|NM_001058862.1| Oryza sativa (japonica cultivar-group) Os04g0257500 (Os04g0257500) mRNA, complete cds Length = 878 Score = 54.0 bits (27), Expect = 0.001 Identities = 86/105 (81%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgca---caagggcacccgcgtctgg 508 ||||||||||| | ||||||||||||||||||||| | | ||| | ||||||||| Sbjct: 266 ccgtggggcaaattcgcggcggagatccgcgacccggagcgcggcggctcacgcgtctgg 325 Query: 509 ctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||||||||| ||||| || ||||| || || |||||| Sbjct: 326 cttggcacgttcgacaccgccgaggaggccgcgcgagcgtacgac 370
>ref|NM_001058221.1| Oryza sativa (japonica cultivar-group) Os03g0815800 (Os03g0815800) mRNA, complete cds Length = 1217 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| | || |||||||||||||||||||| ||| || |||| Sbjct: 445 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgc 504 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcc 541 | ||||||||||| |||||||| ||||| || |||||| Sbjct: 505 ctgtggctcggcaccttcgacaccgccgaggaggccgcc 543
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Minus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| |||||||||||| || |||| ||| || | ||| ||||||||| Sbjct: 106508 tgggggaagtgggtggcggagatccgggagccgcggaagcgctcgcgcaagtggctcggc 106449 Query: 515 acgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||| ||| ||||| || |||||| ||||||||||| Sbjct: 106448 accttcgccaccgccgaggacgccgccagggcctacgac 106410
>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence, complete sequence Length = 27024 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Minus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| | || |||||||||||||||||||| ||| || |||| Sbjct: 23519 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgc 23460 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcc 541 | ||||||||||| |||||||| ||||| || |||||| Sbjct: 23459 ctgtggctcggcaccttcgacaccgccgaggaggccgcc 23421
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| | || |||||||||||||||||||| ||| || |||| Sbjct: 168374 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgc 168433 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcc 541 | ||||||||||| |||||||| ||||| || |||||| Sbjct: 168434 ctgtggctcggcaccttcgacaccgccgaggaggccgcc 168472
>dbj|AK107745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H03, full insert sequence Length = 882 Score = 54.0 bits (27), Expect = 0.001 Identities = 86/105 (81%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgca---caagggcacccgcgtctgg 508 ||||||||||| | ||||||||||||||||||||| | | ||| | ||||||||| Sbjct: 266 ccgtggggcaaattcgcggcggagatccgcgacccggagcgcggcggctcacgcgtctgg 325 Query: 509 ctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||||||||| ||||| || ||||| || || |||||| Sbjct: 326 cttggcacgttcgacaccgccgaggaggccgcgcgagcgtacgac 370
>emb|BX842602.1|OSJN00295 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1234D02, complete sequence Length = 134041 Score = 54.0 bits (27), Expect = 0.001 Identities = 86/105 (81%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccgca---caagggcacccgcgtctgg 508 ||||||||||| | ||||||||||||||||||||| | | ||| | ||||||||| Sbjct: 49082 ccgtggggcaaattcgcggcggagatccgcgacccggagcgcggcggctcacgcgtctgg 49023 Query: 509 ctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 || |||||||||||||| ||||| || ||||| || || |||||| Sbjct: 49022 cttggcacgttcgacaccgccgaggaggccgcgcgagcgtacgac 48978
>dbj|AK068252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145D23, full insert sequence Length = 1071 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| | || |||||||||||||||||||| ||| || |||| Sbjct: 449 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgc 508 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcc 541 | ||||||||||| |||||||| ||||| || |||||| Sbjct: 509 ctgtggctcggcaccttcgacaccgccgaggaggccgcc 547
>dbj|AK066670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074E02, full insert sequence Length = 1218 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgc 502 |||||||| |||||||| | || |||||||||||||||||||| ||| || |||| Sbjct: 446 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgc 505 Query: 503 gtctggctcggcacgttcgacacggccgatgatgccgcc 541 | ||||||||||| |||||||| ||||| || |||||| Sbjct: 506 ctgtggctcggcaccttcgacaccgccgaggaggccgcc 544
>gb|AY111243.1| Zea mays CL784_1 mRNA sequence Length = 979 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 499 ccgcgtctggctcggcacgttcgacacggccgatgatgccgcc 541 |||||| ||||||||||||| |||||||||||| || |||||| Sbjct: 225 ccgcgtgtggctcggcacgtacgacacggccgaggaggccgcc 267
>gb|AY106588.1| Zea mays PCO116881 mRNA sequence Length = 655 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 991 cggcatcgacggcgtcagcctctggagcttcgacgaattcccc 1033 |||||| ||||||||| |||| |||||||||||||| |||||| Sbjct: 272 cggcatggacggcgtccgcctgtggagcttcgacgagttcccc 314
>gb|AY781353.1| Triticum aestivum ethylene-responsive element binding protein 2 (EREB2) mRNA, complete cds Length = 1794 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcgg 513 |||||||| |||||||| |||||||||||||| ||||||| ||| ||||||||||| Sbjct: 667 tggggcaaatgggcggcagagatccgcgaccccgtcaagggcgtccgggtctggctcgg 725
>ref|NM_001069906.1| Oryza sativa (japonica cultivar-group) Os09g0457900 (Os09g0457900) mRNA, complete cds Length = 1100 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 |||||||| ||||||||||| ||||| || |||||| |||| |||||| |||||||| Sbjct: 526 tggctcgggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgccc 583
>ref|NM_001060010.1| Oryza sativa (japonica cultivar-group) Os04g0547600 (Os04g0547600) mRNA, complete cds Length = 1399 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 446 cagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 566 cagcggccgtgggggaagttcgcggcggagatccgcgacccg 607
>ref|NM_001052488.1| Oryza sativa (japonica cultivar-group) Os02g0158000 (Os02g0158000) mRNA, complete cds Length = 612 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| | || || | |||||||| |||||||||| |||||| Sbjct: 110 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgc 167
>gb|AY339379.1| Oryza sativa (japonica cultivar-group) Ap26 mRNA, complete cds Length = 1271 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 446 cagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 537 cagcggccgtgggggaagttcgcggcggagatccgcgacccg 578
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 |||||||| ||||||||||| ||||| || |||||| |||| |||||| |||||||| Sbjct: 38846 tggctcgggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgccc 38903
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccg 480 |||| ||||| |||||| |||||||||||||||||||| Sbjct: 51094 cggctgcgtcagtgggggaagtgggcggcggagatccg 51131
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Minus Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| | || || | |||||||| |||||||||| |||||| Sbjct: 93077 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgc 93020
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Minus Query: 504 tctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgc 561 |||||||||||||||||||| | || || | |||||||| |||||||||| |||||| Sbjct: 37110 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgc 37053
>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1032F05 Length = 151412 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacc 485 |||||||| ||||||| ||||||||||||||||| Sbjct: 125217 ccgtgggggaagtgggaggcggagatccgcgacc 125184
>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1114D08 Length = 148354 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Minus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacc 485 |||||||| ||||||| ||||||||||||||||| Sbjct: 23958 ccgtgggggaagtgggaggcggagatccgcgacc 23925
>dbj|AK109141.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E09, full insert sequence Length = 1399 Score = 52.0 bits (26), Expect = 0.006 Identities = 38/42 (90%) Strand = Plus / Plus Query: 446 cagcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 ||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 566 cagcggccgtgggggaagttcgcggcggagatccgcgacccg 607
>dbj|AK067195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098P10, full insert sequence Length = 1101 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgccc 563 |||||||| ||||||||||| ||||| || |||||| |||| |||||| |||||||| Sbjct: 527 tggctcgggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgccc 584
>gb|AY105702.1| Zea mays PCO125609 mRNA sequence Length = 1889 Score = 52.0 bits (26), Expect = 0.006 Identities = 59/70 (84%) Strand = Plus / Plus Query: 444 ggcagcgtccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcg 503 ||||||| || |||||||| ||||| || |||||| | ||||| |||||||| ||||| Sbjct: 612 ggcagcggccttggggcaaatgggcagctgagatcagggaccccaacaagggcgtccgcg 671 Query: 504 tctggctcgg 513 |||||||||| Sbjct: 672 tctggctcgg 681 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cgatgtgcggcggcgccatcct 132 |||||||||||||||||||||| Sbjct: 207 cgatgtgcggcggcgccatcct 228
>gb|DQ246210.1| Zea mays clone 22782 mRNA sequence Length = 840 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Plus Query: 464 tgggcggcggagatccgcgacccgcacaa 492 ||||| ||||||||||||||||||||||| Sbjct: 203 tgggctgcggagatccgcgacccgcacaa 231
>emb|CT830564.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F08, full insert sequence Length = 1882 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| ||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 870 tgggggaagtgggtggcggagatccgcctcccgcggaaccgcacgcggctctggctcggc 929 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 930 accttcgacaccgccga 946
>emb|CT831646.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI222G01, full insert sequence Length = 1638 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 831 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 890 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 891 accttcgacaccgccga 907
>ref|NM_001069548.1| Oryza sativa (japonica cultivar-group) Os09g0369000 (Os09g0369000) mRNA, complete cds Length = 1407 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| ||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 655 tgggggaagtgggtggcggagatccgcctcccgcggaaccgcacgcggctctggctcggc 714 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 715 accttcgacacagccga 731
>ref|NM_001068811.1| Oryza sativa (japonica cultivar-group) Os08g0521600 (Os08g0521600) mRNA, complete cds Length = 900 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcg 482 |||||||| |||||||||||||||||||| Sbjct: 121 gtggggcaggtgggcggcggagatccgcg 149
>ref|NM_001068314.1| Oryza sativa (japonica cultivar-group) Os08g0408500 (Os08g0408500) mRNA, complete cds Length = 1657 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 830 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 889 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 890 accttcgacaccgccga 906
>ref|NM_001060364.1| Oryza sativa (japonica cultivar-group) Os04g0610400 (Os04g0610400) mRNA, complete cds Length = 669 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||| |||||||||| || ||||||||||||||||||||| Sbjct: 92 agcgcccgtggggcaggtacgcggcggagatccgcgacccg 132
>emb|CT989014.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 866 Score = 50.1 bits (25), Expect = 0.023 Identities = 49/57 (85%) Strand = Plus / Minus Query: 497 acccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 |||||| ||||||||||||| |||||||| || || || ||||||| ||||||||| Sbjct: 802 acccgcctctggctcggcaccttcgacaccgctgaggaagccgccctcgcctacgac 746
>emb|CT988920.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 904 Score = 50.1 bits (25), Expect = 0.023 Identities = 40/45 (88%) Strand = Plus / Minus Query: 498 cccgcgtctggctcggcacgttcgacacggccgatgatgccgccc 542 ||||| ||||||||||||| ||||||||||| || || ||||||| Sbjct: 799 cccgcctctggctcggcaccttcgacacggctgaggaagccgccc 755
>gb|AF493799.1| Zea mays DRE binding factor 2 (dbf2) mRNA, complete cds Length = 1026 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 453 cgtggggcaagtgggcggcggagatccgcgacccgcacaag 493 ||||||||||||||| | ||||||||||||| |||| |||| Sbjct: 365 cgtggggcaagtgggtgtcggagatccgcgagccgcgcaag 405
>gb|AY305028.1| Oryza sativa (japonica cultivar-group) DRE binding factor 2 (DBF2) mRNA, complete cds Length = 1403 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| ||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 655 tgggggaagtgggtggcggagatccgcctcccgcggaaccgcacgcggctctggctcggc 714 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 715 accttcgacaccgccga 731
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 447 agcgtccgtggggcaagtgggcggcggagatccgcgacccg 487 |||| |||||||||| || ||||||||||||||||||||| Sbjct: 70666 agcgcccgtggggcaggtacgcggcggagatccgcgacccg 70706
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcg 482 |||||||| |||||||||||||||||||| Sbjct: 128923 gtggggcaggtgggcggcggagatccgcg 128951
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| ||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 75026 tgggggaagtgggtggcggagatccgcctcccgcggaaccgcacgcggctctggctcggc 75085 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 75086 accttcgacacagccga 75102
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||| ||||||| ||||||||||||| ||||| || |||| || ||||||||||| Sbjct: 97946 tgggggaagtgggtggcggagatccgcctcccgcggaaccgcacgcggctctggctcggc 98005 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 98006 accttcgacacagccga 98022
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcg 482 |||||||| |||||||||||||||||||| Sbjct: 28013 gtggggcaggtgggcggcggagatccgcg 28041
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 16477 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 16536 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 16537 accttcgacaccgccga 16553
>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0453D01 Length = 147461 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 135674 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 135733 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 135734 accttcgacaccgccga 135750
>gb|AF448789.1| Zea mays DREB-like protein (dreb1) mRNA, complete cds Length = 1388 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 453 cgtggggcaagtgggcggcggagatccgcgacccgcacaag 493 ||||||||||||||| | ||||||||||||| |||| |||| Sbjct: 361 cgtggggcaagtgggtgtcggagatccgcgagccgcgcaag 401
>dbj|AK108208.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D07, full insert sequence Length = 900 Score = 50.1 bits (25), Expect = 0.023 Identities = 28/29 (96%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcg 482 |||||||| |||||||||||||||||||| Sbjct: 121 gtggggcaggtgggcggcggagatccgcg 149
>dbj|AK105725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G08, full insert sequence Length = 1652 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 832 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 891 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 892 accttcgacaccgccga 908
>dbj|AK068312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151K12, full insert sequence Length = 1657 Score = 50.1 bits (25), Expect = 0.023 Identities = 64/77 (83%) Strand = Plus / Plus Query: 455 tggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtctggctcggc 514 ||||||||||||| |||||||||||| |||| ||| ||||| | ||||||||||| Sbjct: 829 tggggcaagtgggtggcggagatccggctgccgcgcaaccgcaccaggctctggctcggc 888 Query: 515 acgttcgacacggccga 531 || |||||||| ||||| Sbjct: 889 accttcgacaccgccga 905
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 50.1 bits (25), Expect = 0.023 Identities = 43/49 (87%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacg 554 ||||||||||||||||| || ||||| || || || ||||||||||||| Sbjct: 87949 tggctcggcacgttcgagaccgccgaggaggctgcgcgggcctacgacg 87997
>gb|DQ244357.1| Zea mays clone 5439 mRNA sequence Length = 1002 Score = 48.1 bits (24), Expect = 0.091 Identities = 33/36 (91%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcc 541 ||||||||||||| |||||||||||| || |||||| Sbjct: 257 tggctcggcacgtacgacacggccgaggaggccgcc 292
>emb|CT829445.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA045M03, full insert sequence Length = 1058 Score = 48.1 bits (24), Expect = 0.091 Identities = 39/44 (88%) Strand = Plus / Plus Query: 443 cggcagcgtccgtggggcaagtgggcggcggagatccgcgaccc 486 |||||||| |||||||| | || |||||||||||||||||||| Sbjct: 448 cggcagcggccgtgggggaggttcgcggcggagatccgcgaccc 491
>emb|CT831334.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA021M21, full insert sequence Length = 618 Score = 48.1 bits (24), Expect = 0.091 Identities = 30/32 (93%) Strand = Plus / Plus Query: 267 tcgacgacgacctccaggacttcgacgacgac 298 |||||||||||||| | ||||||||||||||| Sbjct: 346 tcgacgacgacctcgaagacttcgacgacgac 377
>ref|NM_001070247.1| Oryza sativa (japonica cultivar-group) Os09g0522200 (Os09g0522200) mRNA, complete cds Length = 920 Score = 48.1 bits (24), Expect = 0.091 Identities = 27/28 (96%) Strand = Plus / Plus Query: 504 tctggctcggcacgttcgacacggccga 531 |||||||||||||||||||||| ||||| Sbjct: 309 tctggctcggcacgttcgacaccgccga 336
>ref|NM_001063449.1| Oryza sativa (japonica cultivar-group) Os06g0166400 (Os06g0166400) mRNA, complete cds Length = 1005 Score = 48.1 bits (24), Expect = 0.091 Identities = 36/40 (90%) Strand = Plus / Plus Query: 454 gtggggcaagtgggcggcggagatccgcgacccgcacaag 493 |||||| ||||||| ||||||||||||||| ||| ||||| Sbjct: 167 gtgggggaagtgggtggcggagatccgcgagccgaacaag 206
>ref|NM_001063196.1| Oryza sativa (japonica cultivar-group) Os06g0127100 (Os06g0127100) mRNA, complete cds Length = 764 Score = 48.1 bits (24), Expect = 0.091 Identities = 54/64 (84%) Strand = Plus / Plus Query: 498 cccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcg 557 ||||| ||||||||||||| |||| ||| ||||| | ||||| || ||| ||||||||| Sbjct: 197 cccgcatctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcg 256 Query: 558 ccgc 561 |||| Sbjct: 257 ccgc 260
>ref|NM_001048985.1| Oryza sativa (japonica cultivar-group) Os01g0224100 (Os01g0224100) mRNA, complete cds Length = 1816 Score = 48.1 bits (24), Expect = 0.091 Identities = 33/36 (91%) Strand = Plus / Plus Query: 452 ccgtggggcaagtgggcggcggagatccgcgacccg 487 |||||||| |||| ||||||||||||||||||||| Sbjct: 820 ccgtgggggaagtacgcggcggagatccgcgacccg 855 Score = 48.1 bits (24), Expect = 0.091 Identities = 33/36 (91%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcc 541 |||||||||||||||||||| ||||| || |||||| Sbjct: 874 tggctcggcacgttcgacaccgccgaggaggccgcc 909
>gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF1-like protein mRNA, complete cds Length = 717 Score = 48.1 bits (24), Expect = 0.091 Identities = 27/28 (96%) Strand = Plus / Plus Query: 504 tctggctcggcacgttcgacacggccga 531 |||||||||||||||||||||| ||||| Sbjct: 230 tctggctcggcacgttcgacaccgccga 257
>gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, complete cds Length = 850 Score = 48.1 bits (24), Expect = 0.091 Identities = 27/28 (96%) Strand = Plus / Plus Query: 504 tctggctcggcacgttcgacacggccga 531 |||||||||||||||||||||| ||||| Sbjct: 292 tctggctcggcacgttcgacaccgccga 319
>gb|AY327040.1| Oryza sativa (japonica cultivar-group) transcription factor CBF1 mRNA, complete cds Length = 772 Score = 48.1 bits (24), Expect = 0.091 Identities = 54/64 (84%) Strand = Plus / Plus Query: 498 cccgcgtctggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcg 557 ||||| ||||||||||||| |||| ||| ||||| | ||||| || ||| ||||||||| Sbjct: 197 cccgcatctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcg 256 Query: 558 ccgc 561 |||| Sbjct: 257 ccgc 260
>gb|BT009023.1| Triticum aestivum clone wdk3c.pk012.h14:fis, full insert mRNA sequence Length = 817 Score = 48.1 bits (24), Expect = 0.091 Identities = 42/48 (87%) Strand = Plus / Plus Query: 506 tggctcggcacgttcgacacggccgatgatgccgcccgggcctacgac 553 ||||||||||||| ||||||||| || || ||||| || ||||||||| Sbjct: 261 tggctcggcacgtacgacacggcggaggaggccgcgcgcgcctacgac 308 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 217,651,087 Number of extensions: 11927807 Number of successful extensions: 271889 Number of sequences better than 10.0: 498 Number of HSP's gapped: 271836 Number of HSP's successfully gapped: 680 Length of query: 1472 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1449 Effective length of database: 18,503,978,556 Effective search space: 26812264927644 Effective search space used: 26812264927644 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
