ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf13m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q00747:LE25_SOLLC Protein LE25 - Solanum lycopersicum (Tomato) (... 53 7e-07
2P09441:LEA13_GOSHI Late embryogenesis abundant protein D-113 - G... 41 0.003
3P46515:LEA11_HELAN 11 kDa late embryogenesis abundant protein - ... 41 0.003
4Q6FVX3:IWS1_CANGA Transcription factor IWS1 - Candida glabrata (... 34 0.42
5P52530:VU79_HHV6Z Protein U79 - Human herpesvirus 6B (strain Z29... 32 1.6
6Q9C0X8:RRP12_SCHPO Putative ribosomal RNA-processing protein 12 ... 32 1.6
7Q10475:IF4G_SCHPO Eukaryotic translation initiation factor 4 gam... 31 3.5
8P15253:CALR_RABIT Calreticulin precursor - Oryctolagus cuniculus... 30 4.6
9P17741:HMGB2_PIG High mobility group protein B2 - Sus scrofa (Pig) 30 6.0
10Q9ZNY3:CALR_EUGGR Calreticulin precursor - Euglena gracilis 30 6.0

>Q00747:LE25_SOLLC Protein LE25 - Solanum lycopersicum (Tomato) (Lycopersicon|
           esculentum)
          Length = 88
 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +1

Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           G++K KA+  EK ++ TT DP KK  A E KEDR+   +  +R+ K  HAAE+
Sbjct: 14  GMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVAAAEMGKRDAKAQHAAEK 66



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>P09441:LEA13_GOSHI Late embryogenesis abundant protein D-113 - Gossypium hirsutum|
           (Upland cotton) (Gossypium mexicanum)
          Length = 165

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +1

Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDH 300
           G++KAKAS  EKV +  T DP +K  A E KE+R  + D++ R+++  H
Sbjct: 14  GMEKAKASMQEKVDQMKTRDPNEKEMARERKEER--QEDAELRKQEARH 60



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>P46515:LEA11_HELAN 11 kDa late embryogenesis abundant protein - Helianthus annuus|
           (Common sunflower)
          Length = 104

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 20/53 (37%), Positives = 33/53 (62%)
 Frame = +1

Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           G++K KAS  EK +K T  DP +K  A E KE+R  + + +++  K  +AA++
Sbjct: 25  GMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKHEAEYEKQAAKEHNAAQK 77



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>Q6FVX3:IWS1_CANGA Transcription factor IWS1 - Candida glabrata (Yeast) (Torulopsis|
           glabrata)
          Length = 382

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           ++ +A   E+V   ++ DP+ +R+  E++ DRLLK  S  R+   +H  E+
Sbjct: 66  EEVQAPVEEQVTIDSSEDPKSQRQILEDRLDRLLKKTSGRRQRADEHDLEQ 116



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>P52530:VU79_HHV6Z Protein U79 - Human herpesvirus 6B (strain Z29) (HHV-6 variant B)|
           (Human B lymphotropic virus)
          Length = 480

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309
           D+ +  +G++ +K    D  KK+E E+ K++   + D D+R +K D   E
Sbjct: 162 DEHRKRSGKQKEKRKVEDIDKKKEDEKRKQEEKKRNDEDKRPDKKDEFDE 211



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>Q9C0X8:RRP12_SCHPO Putative ribosomal RNA-processing protein 12 - Schizosaccharomyces|
            pombe (Fission yeast)
          Length = 1163

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 9/43 (20%)
 Frame = +1

Query: 184  EKVQKATTTDPRKKREA---------EENKEDRLLKVDSDERE 285
            E V K ++TDPRKK  A         + N+E RLL  DSDE E
Sbjct: 1042 EAVSKISSTDPRKKLAARKQKLNSAFKSNEEGRLLINDSDEDE 1084



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>Q10475:IF4G_SCHPO Eukaryotic translation initiation factor 4 gamma -|
           Schizosaccharomyces pombe (Fission yeast)
          Length = 1403

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309
           +KAK  A EK ++    + + KREAEEN +    +    E EEK    AE
Sbjct: 575 EKAKREAEEKAKREA--EEKAKREAEENAKREAEEKAKREAEEKAKREAE 622



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>P15253:CALR_RABIT Calreticulin precursor - Oryctolagus cuniculus (Rabbit)|
          Length = 418

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKR----EAEENKEDRLLKVDSDEREEKGDHAAERS 315
           +K      ++ Q+    +  KKR    EAEE++ED+  K D DE EE  D   E +
Sbjct: 354 EKQMKDKQDEEQRLKEEEEEKKRKEEEEAEEDEEDKDDKEDEDEDEEDKDEEEEEA 409



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>P17741:HMGB2_PIG High mobility group protein B2 - Sus scrofa (Pig)|
          Length = 210

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 163 KAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGD 297
           K K  AG+K      T  +KK E E+ +E+   + D DE EE  D
Sbjct: 165 KGKGEAGKK-GPGRPTGSKKKNEPEDEEEEEEEEEDEDEEEEDED 208



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>Q9ZNY3:CALR_EUGGR Calreticulin precursor - Euglena gracilis|
          Length = 401

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309
           +K    + E  ++    D RKK+E EE K     + D DE EE+ D   E
Sbjct: 351 EKKAFDSAEADKRKKEEDERKKQEEEEKKTAEEDEDDDDEEEEEDDKKDE 400


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 53,515,490
Number of extensions: 803564
Number of successful extensions: 3082
Number of sequences better than 10.0: 10
Number of HSP's gapped: 3042
Number of HSP's successfully gapped: 10
Length of query: 190
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 83
Effective length of database: 71,336,874
Effective search space: 5920960542
Effective search space used: 5920960542
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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