Clone Name | FLbaf13m10 |
---|---|
Clone Library Name | barley_pub |
>Q00747:LE25_SOLLC Protein LE25 - Solanum lycopersicum (Tomato) (Lycopersicon| esculentum) Length = 88 Score = 53.1 bits (126), Expect = 7e-07 Identities = 24/53 (45%), Positives = 34/53 (64%) Frame = +1 Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312 G++K KA+ EK ++ TT DP KK A E KEDR+ + +R+ K HAAE+ Sbjct: 14 GMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVAAAEMGKRDAKAQHAAEK 66
>P09441:LEA13_GOSHI Late embryogenesis abundant protein D-113 - Gossypium hirsutum| (Upland cotton) (Gossypium mexicanum) Length = 165 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/49 (42%), Positives = 32/49 (65%) Frame = +1 Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDH 300 G++KAKAS EKV + T DP +K A E KE+R + D++ R+++ H Sbjct: 14 GMEKAKASMQEKVDQMKTRDPNEKEMARERKEER--QEDAELRKQEARH 60
>P46515:LEA11_HELAN 11 kDa late embryogenesis abundant protein - Helianthus annuus| (Common sunflower) Length = 104 Score = 41.2 bits (95), Expect = 0.003 Identities = 20/53 (37%), Positives = 33/53 (62%) Frame = +1 Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312 G++K KAS EK +K T DP +K A E KE+R + + +++ K +AA++ Sbjct: 25 GMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKHEAEYEKQAAKEHNAAQK 77
>Q6FVX3:IWS1_CANGA Transcription factor IWS1 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 382 Score = 33.9 bits (76), Expect = 0.42 Identities = 16/51 (31%), Positives = 30/51 (58%) Frame = +1 Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312 ++ +A E+V ++ DP+ +R+ E++ DRLLK S R+ +H E+ Sbjct: 66 EEVQAPVEEQVTIDSSEDPKSQRQILEDRLDRLLKKTSGRRQRADEHDLEQ 116
>P52530:VU79_HHV6Z Protein U79 - Human herpesvirus 6B (strain Z29) (HHV-6 variant B)| (Human B lymphotropic virus) Length = 480 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +1 Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309 D+ + +G++ +K D KK+E E+ K++ + D D+R +K D E Sbjct: 162 DEHRKRSGKQKEKRKVEDIDKKKEDEKRKQEEKKRNDEDKRPDKKDEFDE 211
>Q9C0X8:RRP12_SCHPO Putative ribosomal RNA-processing protein 12 - Schizosaccharomyces| pombe (Fission yeast) Length = 1163 Score = 32.0 bits (71), Expect = 1.6 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 9/43 (20%) Frame = +1 Query: 184 EKVQKATTTDPRKKREA---------EENKEDRLLKVDSDERE 285 E V K ++TDPRKK A + N+E RLL DSDE E Sbjct: 1042 EAVSKISSTDPRKKLAARKQKLNSAFKSNEEGRLLINDSDEDE 1084
>Q10475:IF4G_SCHPO Eukaryotic translation initiation factor 4 gamma -| Schizosaccharomyces pombe (Fission yeast) Length = 1403 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +1 Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309 +KAK A EK ++ + + KREAEEN + + E EEK AE Sbjct: 575 EKAKREAEEKAKREA--EEKAKREAEENAKREAEEKAKREAEEKAKREAE 622
>P15253:CALR_RABIT Calreticulin precursor - Oryctolagus cuniculus (Rabbit)| Length = 418 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +1 Query: 160 DKAKASAGEKVQKATTTDPRKKR----EAEENKEDRLLKVDSDEREEKGDHAAERS 315 +K ++ Q+ + KKR EAEE++ED+ K D DE EE D E + Sbjct: 354 EKQMKDKQDEEQRLKEEEEEKKRKEEEEAEEDEEDKDDKEDEDEDEEDKDEEEEEA 409
>P17741:HMGB2_PIG High mobility group protein B2 - Sus scrofa (Pig)| Length = 210 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +1 Query: 163 KAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGD 297 K K AG+K T +KK E E+ +E+ + D DE EE D Sbjct: 165 KGKGEAGKK-GPGRPTGSKKKNEPEDEEEEEEEEEDEDEEEEDED 208
>Q9ZNY3:CALR_EUGGR Calreticulin precursor - Euglena gracilis| Length = 401 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +1 Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309 +K + E ++ D RKK+E EE K + D DE EE+ D E Sbjct: 351 EKKAFDSAEADKRKKEEDERKKQEEEEKKTAEEDEDDDDEEEEEDDKKDE 400 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 53,515,490 Number of extensions: 803564 Number of successful extensions: 3082 Number of sequences better than 10.0: 10 Number of HSP's gapped: 3042 Number of HSP's successfully gapped: 10 Length of query: 190 Length of database: 100,686,439 Length adjustment: 107 Effective length of query: 83 Effective length of database: 71,336,874 Effective search space: 5920960542 Effective search space used: 5920960542 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)