ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf13m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os06g21910:12006.t02007:unspliced-genomic protein LE25, ... 68 9e-14
2LOC_Os03g44890:12003.t03873:unspliced-genomic anthranilate p... 32 0.11
3LOC_Os08g23870:12008.t02158:unspliced-genomic seed maturatio... 36 0.17
4LOC_Os05g36360:12005.t03229:unspliced-genomic photoperiod re... 34 1.1
5LOC_Os01g12660:12001.t01132:unspliced-genomic ATP binding pr... 33 1.6
6LOC_Os03g47540:12003.t04112:unspliced-genomic hypothetical p... 31 5.6

>LOC_Os06g21910:12006.t02007:unspliced-genomic protein LE25, putative, expressed|
          Length = 629
 Score = 68.0 bits (142), Expect(2) = 9e-14
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +1 / +2

                                                      
Query: 187 KVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAERS 315
           +V+KATT DP KKREAEE KEDR L+ +SDER EK  HA E+S
Sbjct: 254 QVEKATTGDPMKKREAEERKEDRKLEAESDERVEKEGHADEKS 382



 Score = 28.1 bits (55), Expect(2) = 9e-14
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1 / +3

                                            
Query: 97  KEMATIXXXXXXXXXXXXXGIDKAKASAGEKVQ 195
           + MAT+             G+ KAKA+AGEKV+
Sbjct: 87  ERMATMKAKAEDAASSAKAGVHKAKATAGEKVR 185



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>LOC_Os03g44890:12003.t03873:unspliced-genomic anthranilate phosphoribosyltransferase-like protein, putative,|
           expressed
          Length = 3542

 Score = 32.2 bits (64), Expect(2) = 0.11
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1 / +1

                                                     
Query: 172 ASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGD 297
           A+A    ++     P ++++AEE K++     ++D++EEK D
Sbjct: 742 AAAASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKEEKDD 867



 Score = 26.3 bits (51), Expect(2) = 0.11
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3 / +3

                         
Query: 66  KRRPRGHVIREGNG 107
           +R PRGHV R+G G
Sbjct: 468 RRPPRGHVPRQGQG 509



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>LOC_Os08g23870:12008.t02158:unspliced-genomic seed maturation protein, putative, expressed|
          Length = 815

 Score = 36.3 bits (73), Expect = 0.17
 Identities = 15/53 (28%), Positives = 31/53 (58%)
 Frame = +1 / +3

                                                                
Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           G+DK++A+   +V+KAT  +   K  AE  +++RL   + +++     +AA +
Sbjct: 165 GMDKSRAAVQGQVEKATARNAADKDAAEVRRQERLQAAEEEKQHAMAANAAAK 323



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>LOC_Os05g36360:12005.t03229:unspliced-genomic photoperiod responsive protein, putative, expressed|
          Length = 1616

 Score = 33.6 bits (67), Expect = 1.1
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2 / -2

                           
Query: 446  TCCYWT*LEAFFFTR 402
            TCCYW  LE FFF R
Sbjct: 1606 TCCYWNLLENFFFAR 1562



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>LOC_Os01g12660:12001.t01132:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 5850

 Score = 33.1 bits (66), Expect = 1.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1 / -1

                                    
Query: 105  HFLHESRARAVAVCSEHSICCRLH 34
            HFL  S  RA+ +CS    CCR H
Sbjct: 4629 HFLSSSLPRALQLCSADQACCRPH 4558



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>LOC_Os03g47540:12003.t04112:unspliced-genomic hypothetical protein|
          Length = 3212

 Score = 31.3 bits (62), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1 / -3

                         
Query: 66   CSEHSICCRLHWI 28
            C  H  CCRLHW+
Sbjct: 2370 CCAHCCCCRLHWV 2332


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 115,513,289
Number of extensions: 1205851
Number of successful extensions: 5478
Number of sequences better than 10.0: 6
Length of query: 190
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 142
Effective length of database: 52,912,542
Effective search space: 7513580964
Effective search space used: 7513580964
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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