ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf13m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK063726:Os06g0324400 78 5e-15
2AK107930:Os08g0327700 33 0.17
3Os06g0671800:Os06g0671800 29 1.9
4AK110820:Os03g0652000 29 1.9
5AK073484:Os05g0592600 29 2.5
6AK110329: 28 4.2
7AK067986:Os06g0224200 28 4.2
8AK103612:Os01g0752800 28 5.5
9Os12g0597100:Os12g0597100 27 9.4
10AK100968:Os07g0555200 27 9.4
11AK066706:Os07g0555200 27 9.4

>AK063726:Os06g0324400 |
          Length = 81
 Score = 77.8 bits (190), Expect = 5e-15
 Identities = 41/71 (57%), Positives = 48/71 (67%)
 Frame = +1

Query: 103 MATIXXXXXXXXXXXXXGIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDER 282
           MAT+             G+ KAKA+AGEKV+KATT DP KKREAEE KEDR L+ +SDER
Sbjct: 1   MATMKAKAEDAASSAKAGVHKAKATAGEKVEKATTGDPMKKREAEERKEDRKLEAESDER 60

Query: 283 EEKGDHAAERS 315
            EK  HA E+S
Sbjct: 61  VEKEGHADEKS 71



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>AK107930:Os08g0327700 |
          Length = 150

 Score = 32.7 bits (73), Expect = 0.17
 Identities = 15/53 (28%), Positives = 31/53 (58%)
 Frame = +1

Query: 154 GIDKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           G+DK++A+   +V+KAT  +   K  AE  +++RL   + +++     +AA +
Sbjct: 25  GMDKSRAAVQGQVEKATARNAADKDAAEVRRQERLQAAEEEKQHAMAANAAAK 77



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>Os06g0671800:Os06g0671800 |
          Length = 517

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +1

Query: 163 KAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309
           K KA+A E+ +KA      +K++ EE KE+     +  + EE+G+   E
Sbjct: 90  KKKAAAAEE-EKAVEEAAGEKKDGEEKKEEEEPVTEEKKEEEQGEEEEE 137



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>AK110820:Os03g0652000 |
          Length = 422

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 172 ASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGD 297
           A+A    ++     P ++++AEE K++     ++D++EEK D
Sbjct: 182 AAAASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKEEKDD 223



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>AK073484:Os05g0592600 |
          Length = 1207

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHA 303
           +  KA  GE V+ A     +KK+E E+ K+    + D+ + EEK   A
Sbjct: 283 EDGKAGEGE-VESAAAKKKKKKKEKEKEKKAAAKEADAKKEEEKAVEA 329



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>AK110329: |
          Length = 784

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 184 EKVQKATTTDPRKKR--EAEENKEDRLLKVDSDEREEKGDHAAE 309
           EKVQK  T+ P+KK     E+ +++R  + D  ER E+   AA+
Sbjct: 80  EKVQKIVTSKPKKKALPTIEQERQERRRERDR-ERRERNRRAAQ 122



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>AK067986:Os06g0224200 |
          Length = 711

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 160 DKAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAE 309
           D ++    EK+ K  ++DP +  ++ + +ED L +  S+E    G   AE
Sbjct: 61  DDSQKEFNEKMNKEGSSDPMEPTDSSQTEEDILAEDKSEEPVFDGTEVAE 110



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>AK103612:Os01g0752800 |
          Length = 166

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 175 SAGEKVQKATTTDPR--KKREAEENKEDRLLKVDSDEREEKGDHA 303
           S  E++   T+  PR  KK  AEE KE+    ++  E EE  D +
Sbjct: 17  STPEEIAAGTSGRPRTFKKNLAEEEKEEEEDDIEESEEEESEDES 61



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>Os12g0597100:Os12g0597100 |
          Length = 1137

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 163 KAKASAGEKVQKATTTDPRKKREAEENKEDRLLKVDSDE 279
           KAK SA EK ++      ++K+ + +N + +  KVD  E
Sbjct: 459 KAKRSAAEKEKRIRKKQAKQKKNSRKNNKGKNEKVDIKE 497



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>AK100968:Os07g0555200 |
          Length = 566

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 187 KVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           K Q+      R++ EA++ +E+  +K   +EREEK   A  R
Sbjct: 41  KCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRIRARRR 82



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>AK066706:Os07g0555200 |
          Length = 814

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 187 KVQKATTTDPRKKREAEENKEDRLLKVDSDEREEKGDHAAER 312
           K Q+      R++ EA++ +E+  +K   +EREEK   A  R
Sbjct: 289 KCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRIRARRR 330


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 8,616,101
Number of extensions: 132346
Number of successful extensions: 528
Number of sequences better than 10.0: 11
Number of HSP's gapped: 525
Number of HSP's successfully gapped: 11
Length of query: 190
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 95
Effective length of database: 11,595,960
Effective search space: 1101616200
Effective search space used: 1101616200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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