No.
Definition
Score (bits)
E Value
1 LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisp...
280
e-101
2 LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisph...
280
2e-98
3 LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisph...
280
8e-98
4 LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisph...
277
1e-97
5 LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisph...
132
2e-40
6 LOC_Os07g33340:12007.t03014:unspliced-genomic ATP-dependent ...
36
0.30
7 LOC_Os08g14280:12008.t01303:unspliced-genomic retrotransposo...
36
0.41
8 LOC_Os05g44970:12005.t03985:unspliced-genomic senescence-ind...
35
0.56
9 LOC_Os03g18454:12003.t01617:unspliced-genomic gamma-interfer...
35
0.56
10 LOC_Os08g17540:12008.t01624:unspliced-genomic retrotransposo...
35
0.77
11 LOC_Os05g19030:12005.t01670:unspliced-genomic expressed protein
35
0.77
12 LOC_Os01g10490:12001.t00923:unspliced-genomic meiosis 5, put...
34
1.0
13 LOC_Os08g41440:12008.t03873:unspliced-genomic NAD-dependent ...
35
1.1
14 LOC_Os06g23390:12006.t02151:unspliced-genomic SF16-like prot...
35
1.1
15 LOC_Os11g48000:12011.t04293:unspliced-genomic zinc finger, C...
33
1.2
16 LOC_Os04g26140:12004.t02321:unspliced-genomic retrotransposo...
30
1.2
17 LOC_Os11g47840:12011.t04276:unspliced-genomic membrane prote...
34
1.4
18 LOC_Os11g43130:12011.t03843:unspliced-genomic retrotransposo...
34
1.4
19 LOC_Os09g22460:12009.t01979:unspliced-genomic F-box domain c...
34
1.4
20 LOC_Os08g03980:12008.t00293:unspliced-genomic retrotransposo...
34
1.4
21 LOC_Os04g25610:12004.t02268:unspliced-genomic retrotransposo...
26
1.5
22 LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like ...
27
1.8
23 LOC_Os10g04840:12010.t00364:unspliced-genomic hypothetical p...
34
2.0
24 LOC_Os07g31610:12007.t02848:unspliced-genomic peroxidase 7 p...
34
2.0
25 LOC_Os07g11500:12007.t01023:unspliced-genomic retrotransposo...
34
2.0
26 LOC_Os07g05920:12007.t00475:unspliced-genomic retrotransposo...
34
2.0
27 LOC_Os06g07110:12006.t00595:unspliced-genomic retrotransposo...
34
2.0
28 LOC_Os05g26550:12005.t02309:unspliced-genomic retrotransposo...
34
2.0
29 LOC_Os03g11470:12003.t00947:unspliced-genomic activating sig...
34
2.0
30 LOC_Os08g15650:12008.t01439:unspliced-genomic expressed protein
27
2.1
31 LOC_Os03g61240:12003.t05357:unspliced-genomic expressed protein
28
2.2
32 LOC_Os07g36070:12007.t03279:unspliced-genomic retrotransposo...
31
2.3
33 LOC_Os11g46020:12011.t04127:unspliced-genomic retrotransposo...
29
2.4
34 LOC_Os12g11430:12012.t01018:unspliced-genomic retrotransposo...
33
2.7
35 LOC_Os11g36940:12011.t03238:unspliced-genomic glucan endo-1,...
33
2.7
36 LOC_Os09g28340:12009.t02512:unspliced-genomic expressed protein
33
2.7
37 LOC_Os05g44950:12005.t03983:unspliced-genomic senescence-ind...
33
2.7
38 LOC_Os04g49394:12004.t04455:unspliced-genomic ulp1 protease ...
33
2.7
39 LOC_Os02g07690:12002.t00666:unspliced-genomic VQ motif famil...
33
2.7
40 LOC_Os01g07720:12001.t00652:unspliced-genomic dolichyl-P-Man...
33
2.7
41 LOC_Os01g03950:12001.t00284:unspliced-genomic alpha-D-xylosi...
30
3.1
42 LOC_Os08g23640:12008.t02136:unspliced-genomic retrotransposo...
29
3.2
43 LOC_Os05g37700:12005.t03312:unspliced-genomic periplasmic be...
25
3.5
44 LOC_Os04g48170:12004.t04336:unspliced-genomic cytochrome P45...
27
3.5
45 LOC_Os12g24330:12012.t02162:unspliced-genomic expressed protein
33
3.8
46 LOC_Os08g22210:12008.t02002:unspliced-genomic retrotransposo...
33
3.8
47 LOC_Os04g09860:12004.t00820:unspliced-genomic ATARP9, putati...
33
3.8
48 LOC_Os02g07160:12002.t00613:unspliced-genomic 4-hydroxypheny...
33
3.8
49 LOC_Os02g06180:12002.t00516:unspliced-genomic phytosulfokine...
33
3.8
50 LOC_Os01g37590:12001.t03301:unspliced-genomic peptide transp...
28
3.8
51 LOC_Os08g44680:12008.t04191:unspliced-genomic photosystem I ...
26
3.9
52 LOC_Os03g41438:12003.t03558:unspliced-genomic protein Z, put...
32
4.1
53 LOC_Os12g09310:12012.t00810:unspliced-genomic conserved hypo...
25
4.1
54 LOC_Os05g02870:12005.t00185:unspliced-genomic ATPase, couple...
27
4.7
55 LOC_Os12g43860:12012.t04053:unspliced-genomic retrotransposo...
32
5.2
56 LOC_Os12g36370:12012.t03320:unspliced-genomic retrotransposo...
32
5.2
57 LOC_Os12g33170:12012.t03010:unspliced-genomic retrotransposo...
32
5.2
58 LOC_Os12g27310:12012.t02444:unspliced-genomic retrotransposo...
32
5.2
59 LOC_Os10g13490:12010.t01079:unspliced-genomic retrotransposo...
32
5.2
60 LOC_Os09g32670:12009.t02881:unspliced-genomic protein capI, ...
32
5.2
61 LOC_Os09g23980:12009.t02081:unspliced-genomic retrotransposo...
32
5.2
62 LOC_Os09g17510:12009.t01537:unspliced-genomic retrotransposo...
32
5.2
63 LOC_Os08g36340:12008.t03374:unspliced-genomic potassium tran...
32
5.2
64 LOC_Os08g27980:12008.t02556:unspliced-genomic transposon pro...
32
5.2
65 LOC_Os08g13240:12008.t01202:unspliced-genomic retrotransposo...
32
5.2
66 LOC_Os08g13120:12008.t01190:unspliced-genomic retrotransposo...
32
5.2
67 LOC_Os07g48210:12007.t04454:unspliced-genomic retrotransposo...
32
5.2
68 LOC_Os07g41960:12007.t03851:unspliced-genomic hypothetical p...
32
5.2
69 LOC_Os07g36360:12007.t03307:unspliced-genomic retrotransposo...
32
5.2
70 LOC_Os07g24280:12007.t02125:unspliced-genomic retrotransposo...
32
5.2
71 LOC_Os06g36980:12006.t03393:unspliced-genomic retrotransposo...
32
5.2
72 LOC_Os06g33549:12006.t03051:unspliced-genomic protein phosph...
32
5.2
73 LOC_Os06g32630:12006.t02961:unspliced-genomic retrotransposo...
32
5.2
74 LOC_Os06g25000:12006.t02308:unspliced-genomic retrotransposo...
32
5.2
75 LOC_Os06g21430:12006.t01960:unspliced-genomic retrotransposo...
32
5.2
76 LOC_Os06g21420:12006.t01959:unspliced-genomic retrotransposo...
32
5.2
77 LOC_Os05g45600:12005.t04048:unspliced-genomic retrotransposo...
32
5.2
78 LOC_Os05g30830:12005.t02682:unspliced-genomic retrotransposo...
32
5.2
79 LOC_Os05g23090:12005.t01967:unspliced-genomic retrotransposo...
32
5.2
80 LOC_Os05g20760:12005.t01837:unspliced-genomic retrotransposo...
32
5.2
81 LOC_Os05g13460:12005.t01124:unspliced-genomic retrotransposo...
32
5.2
82 LOC_Os05g05870:12005.t00477:unspliced-genomic retrotransposo...
32
5.2
83 LOC_Os04g33540:12004.t03030:unspliced-genomic hypothetical p...
32
5.2
84 LOC_Os04g28700:12004.t02565:unspliced-genomic retrotransposo...
32
5.2
85 LOC_Os04g26030:12004.t02310:unspliced-genomic retrotransposo...
32
5.2
86 LOC_Os04g25480:12004.t02256:unspliced-genomic retrotransposo...
32
5.2
87 LOC_Os04g23220:12004.t02049:unspliced-genomic expressed protein
32
5.2
88 LOC_Os04g20900:12004.t01824:unspliced-genomic retrotransposo...
32
5.2
89 LOC_Os04g19710:12004.t01711:unspliced-genomic retrotransposo...
32
5.2
90 LOC_Os04g19490:12004.t01689:unspliced-genomic retrotransposo...
32
5.2
91 LOC_Os04g18820:12004.t01624:unspliced-genomic retrotransposo...
32
5.2
92 LOC_Os04g06560:12004.t00536:unspliced-genomic retrotransposo...
32
5.2
93 LOC_Os03g35600:12003.t03045:unspliced-genomic serine/threoni...
32
5.2
94 LOC_Os03g05770:12003.t00448:unspliced-genomic peroxidase 28 ...
32
5.2
95 LOC_Os02g38830:12002.t03521:unspliced-genomic retrotransposo...
32
5.2
96 LOC_Os02g37890:12002.t03427:unspliced-genomic retrotransposo...
32
5.2
97 LOC_Os01g73850:12001.t06665:unspliced-genomic retrotransposo...
32
5.2
98 LOC_Os01g21290:12001.t01866:unspliced-genomic retrotransposo...
32
5.2
99 LOC_Os04g11810:12004.t01005:unspliced-genomic acyltransferas...
29
5.8
100 LOC_Os02g05120:12002.t00410:unspliced-genomic expressed protein
29
5.9
101 LOC_Os11g47350:12011.t04210:unspliced-genomic beta-D-xylosid...
29
6.2
102 LOC_Os01g36090:12001.t03159:unspliced-genomic DNA-damage-rep...
25
6.8
103 LOC_Os05g15880:12005.t01359:unspliced-genomic xylanase inhib...
26
7.0
104 LOC_Os12g41090:12012.t03786:unspliced-genomic CBL-interactin...
32
7.1
105 LOC_Os11g37670:12011.t03307:unspliced-genomic expressed protein
32
7.1
106 LOC_Os11g12740:12011.t01161:unspliced-genomic peptide transp...
32
7.1
107 LOC_Os05g23490:12005.t02006:unspliced-genomic hypothetical p...
32
7.1
108 LOC_Os03g31630:12003.t02762:unspliced-genomic subtilisin-lik...
31
7.2
109 LOC_Os09g27420:12009.t02421:unspliced-genomic formate--tetra...
27
8.7
110 LOC_Os11g04310:12011.t00324:unspliced-genomic cytochrome P45...
29
8.9
111 LOC_Os08g14364:12008.t04300:unspliced-genomic expressed protein
25
9.0
112 LOC_Os03g41980:12003.t03606:unspliced-genomic retrotransposo...
30
9.0
113 LOC_Os02g53200:12002.t04899:unspliced-genomic glucan endo-1,...
28
9.1
114 LOC_Os07g33310:12007.t03011:unspliced-genomic transparent te...
29
9.3
115 LOC_Os01g38120:12001.t03350:unspliced-genomic conserved hypo...
30
9.4
116 LOC_Os12g38950:12012.t03575:unspliced-genomic zinc finger, C...
31
9.7
117 LOC_Os12g19840:12012.t01827:unspliced-genomic retrotransposo...
31
9.7
118 LOC_Os12g19830:12012.t01826:unspliced-genomic retrotransposo...
31
9.7
119 LOC_Os08g24160:12008.t02186:unspliced-genomic ripening-relat...
31
9.7
120 LOC_Os07g38840:12007.t03548:unspliced-genomic expressed protein
31
9.7
121 LOC_Os06g06510:12006.t00536:unspliced-genomic histone H3, pu...
31
9.7
122 LOC_Os06g06490:12006.t00534:unspliced-genomic U-box domain c...
31
9.7
123 LOC_Os06g06480:12006.t00533:unspliced-genomic core histone H...
31
9.7
124 LOC_Os06g06460:12006.t00531:unspliced-genomic histone H3, pu...
31
9.7
125 LOC_Os04g27100:12004.t02414:unspliced-genomic expressed protein
31
9.7
126 LOC_Os03g51520:12003.t04479:unspliced-genomic fip1 motif fam...
31
9.7
127 LOC_Os03g14830:12003.t01269:unspliced-genomic phosphomevalon...
31
9.7
128 LOC_Os02g58770:12002.t05447:unspliced-genomic retrotransposo...
31
9.7
129 LOC_Os01g71860:12001.t06478:unspliced-genomic glycosyl hydro...
31
9.7
130 LOC_Os01g66010:12001.t05962:unspliced-genomic amino acid car...
31
9.7
131 LOC_Os01g09700:12001.t00847:unspliced-genomic 1-aminocyclopr...
31
9.7
132 LOC_Os10g33540:12010.t02655:unspliced-genomic alcohol oxidas...
26
9.8
>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1344
Score = 280 bits (605), Expect(4) = e-101
Identities = 106/125 (84%), Positives = 118/125 (94%)
Frame = +2 / +3
Query: 215 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYY 394
QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYY
Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 647
Query: 395 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 574
DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPG
Sbjct: 648 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 827
Query: 575 CEESG 589
CEESG
Sbjct: 828 CEESG 842
Score = 103 bits (219), Expect(4) = e-101
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +2 / +3
Query: 71 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSGSAGLSSVSNGGRIRCMQV 220
MAP VMASSAT+VAPFQGLKSTAGLPVSRRS SAGL SVSNGGRI CMQV
Sbjct: 207 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQV 356
Score = 27.6 bits (54), Expect(4) = e-101
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 712 MYVSTYQRRSRKMHMRIIVP 771
MY+ YQ R + MHM ++ P
Sbjct: 1034 MYICMYQHRLKSMHM*MLAP 1093
Score = 25.4 bits (49), Expect(4) = e-101
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 664 FLNFTSCSNHM*IYEHMYVST 726
F + C + + +Y HMYVST
Sbjct: 994 FFSSCLCQHQLCMYVHMYVST 1056
Score = 199 bits (429), Expect(4) = 3e-63
Identities = 89/125 (71%), Positives = 97/125 (77%)
Frame = -3 / -3
Query: 588 PDSSQPGGLKAMKLTHCT*RRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 409
PDSSQPGGL AMKL +CT LSKPM+RT ASGY T VASVHPNIGSFH+V
Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662
Query: 408 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLMPS 229
QY PS*YPG+L SR T PTLLNSRQGTHL+R R S CF+R+S V GG+ DRVSNFLMPS
Sbjct: 661 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSNFLMPS 482
Query: 228 IGHTC 214
IGHTC
Sbjct: 481 IGHTC 467
Score = 57.0 bits (118), Expect(4) = 3e-63
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3 / -3
Query: 150 TGRPAVDLSPWKGATVVADEAITAGAM 70
TG PAVDLSPWKGAT VADEAIT GA+
Sbjct: 286 TGSPAVDLSPWKGATEVADEAITVGAI 206
Score = 26.7 bits (52), Expect(4) = 3e-63
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 769 VL*FSYASSSTYVGRCLHTY 710
VL F+YA SSTYV + TY
Sbjct: 1091 VLAFTYACSSTYVDTYICTY 1032
Score = 23.5 bits (45), Expect(4) = 3e-63
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / -2
Query: 719 TYICSYIH 696
TYIC+YIH
Sbjct: 1049 TYICTYIH 1026
Score = 153 bits (329), Expect(2) = 1e-40
Identities = 76/126 (60%), Positives = 91/126 (72%)
Frame = +1 / +2
Query: 214 AGVAD*GHQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPRVL 393
AGVAD* HQEV DPV+ AT H GP EA +P P+Q+GALPRV G +RLP* Q+ VL
Sbjct: 467 AGVAD*RHQEV*DPVVPATAHGRGPLEADRVPAPVQMGALPRV**GRVRLP*EPQVSWVL 646
Query: 394 RRPILDNVEAAYVRVHRRHTGAQ*GRGGQKGVP*RLRPYHRLRQPASGAVRQLHRLQATG 573
+LD+VEAAYVR+H H GAQ RGGQ+G+ + +HRLRQ +GAV LHRLQA G
Sbjct: 647 *WQVLDHVEAAYVRMH*CHPGAQGARGGQEGISRCICSHHRLRQRQAGAVD*LHRLQAPG 826
Query: 574 LRGVRQ 591
LRGVR+
Sbjct: 827 LRGVRR 844
Score = 36.8 bits (74), Expect(2) = 1e-40
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / +2
Query: 70 HGPSRDGFVSHHRRPLPGAQVHR 138
+G RDG V H R LPGAQ+HR
Sbjct: 206 NGAHRDGLVGHLRCSLPGAQIHR 274
Score = 82.6 bits (174), Expect(3) = 1e-27
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = -2 / -2
Query: 370 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDALNRPHL 215
LT DE +L +LEA HP G +QV++LLQE L E WQVRQGL+LLDA NRPHL
Sbjct: 623 LTVDEPDLTKLEARHPFGPEQVLDLLQEVLDRERWQVRQGLKLLDAFNRPHL 468
Score = 58.3 bits (121), Expect(3) = 1e-27
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = -2 / -2
Query: 559 GDEADALHLTQVVEADDTXXXXXXXXXXXXXLIEHLCGVGAPEHRQLPH 413
GDEA+ LHL VVEADD L+EHL G+ A EHRQLPH
Sbjct: 812 GDEANQLHLPDVVEADDANKCIWICLLGLLELLEHLGGISASEHRQLPH 666
Score = 26.3 bits (51), Expect(3) = 1e-27
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 759 SHMHLPRPTLVGAYIH 712
SHMH +P L+ Y+H
Sbjct: 1081 SHMHALQPMLIHTYVH 1034
Score = 65.7 bits (137), Expect(3) = 5e-21
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -1 / -1
Query: 449 WRRCTRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 318
W +C RT*AAST SS ST+ +C +HGRR++P *TRG+AP W
Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRRTRPY*TRGKAPIW 571
Score = 39.1 bits (79), Expect(3) = 5e-21
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 587 RTPRNPVA*RR*S*RTAPDAGCRSR* 510
RTPRNP A RR*S* TAP CRSR*
Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR* 763
Score = 34.1 bits (68), Expect(3) = 5e-21
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -1 / -1
Query: 269 VASKTGSRTS*CPQSATPA 213
VA TGS+TS*C QSATPA
Sbjct: 522 VAGTTGSQTS*CLQSATPA 466
Score = 43.7 bits (89), Expect(3) = 8e-12
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +3 / +1
Query: 510 SSASTTCVRCSASASSPSGHRVARSPARHKV 602
SSASTT RCS ASSP+ RVARSPA K+
Sbjct: 763 SSASTTSGRCS*LASSPTSPRVARSPAETKL 855
Score = 42.8 bits (87), Expect(3) = 8e-12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 216 RCGRLRASRSSRPCLTCH 269
RCGRL+ASRS RPC TCH
Sbjct: 469 RCGRLKASRSLRPCRTCH 522
Score = 26.3 bits (51), Expect(3) = 8e-12
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +1
Query: 414 CGSCLCSGAPTP 449
CGSCLCS A P
Sbjct: 667 CGSCLCSDALMP 702
>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1193
Score = 280 bits (606), Expect(2) = 2e-98
Identities = 106/126 (84%), Positives = 119/126 (94%)
Frame = +2 / +2
Query: 212 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGY 391
+QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGY
Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 523
Query: 392 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 571
YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PP
Sbjct: 524 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 703
Query: 572 GCEESG 589
GCEESG
Sbjct: 704 GCEESG 721
Score = 99.6 bits (211), Expect(2) = 2e-98
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +2 / +2
Query: 71 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSGSAGLSSVSNGGRIRCMQVWPI 229
MAP VMASSAT+VAPFQGLKSTAGLPVSRRS ++G +VSNGGRI+CMQV+ I
Sbjct: 92 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVYMI 250
Score = 185 bits (398), Expect(3) = 5e-54
Identities = 82/126 (65%), Positives = 99/126 (78%)
Frame = +1 / +1
Query: 208 MHAGVAD*GHQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 387
+++GVA+*GHQEVRDP++ AT H GG EA +P +QVGALPRVQQGW+RLP* Q+ R
Sbjct: 340 IYSGVAN*GHQEVRDPIVPATTHRGGSFEADRVPASIQVGALPRVQQGWIRLP*EPQVSR 519
Query: 388 VLRRPILDNVEAAYVRVHRRHTGAQ*GRGGQKGVP*RLRPYHRLRQPASGAVRQLHRLQA 567
VLR +LD+VEAA+VR+HR H GAQ RGGQ+G+P L PYHRLRQ +GAV LHRLQA
Sbjct: 520 VLRWQVLDHVEAAHVRLHRCHPGAQGARGGQEGLPRCLCPYHRLRQRQAGAVD*LHRLQA 699
Query: 568 TGLRGV 585
LRGV
Sbjct: 700 PRLRGV 717
Score = 35.9 bits (72), Expect(3) = 5e-54
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 70 HGPSRDGFVSHHRRPLPGAQVHR 138
+GP RDG + H R +P AQVHR
Sbjct: 91 YGPHRDGLLGHLRGSIPRAQVHR 159
Score = 29.5 bits (58), Expect(3) = 5e-54
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 193 WRKDQMHAGVAD 228
WRKDQ+HAG+ D
Sbjct: 214 WRKDQVHAGIYD 249
Score = 139 bits (299), Expect(3) = 2e-52
Identities = 59/78 (75%), Positives = 66/78 (84%)
Frame = -3 / -3
Query: 450 VASVHPNIGSFHIVQYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVR 271
VASV PN+GSFH+VQY PS*YPG+L SR T PTLLNSRQGTHL+R R S CF+R+S V
Sbjct: 582 VASVQPNMGSFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVS 403
Query: 270 GGK*DRVSNFLMPSIGHT 217
GG+ DRVSNFLMPSIGHT
Sbjct: 402 GGRYDRVSNFLMPSIGHT 349
Score = 57.4 bits (119), Expect(3) = 2e-52
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3 / -3
Query: 588 PDSSQPGGLKAMKLTHCT*RRLSKPMIRT*ASG 490
PDSSQPGGL AMKL +CT LSKPMIRT ASG
Sbjct: 720 PDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG 622
Score = 52.8 bits (109), Expect(3) = 2e-52
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3 / -3
Query: 150 TGRPAVDLSPWKGATVVADEAITAGAM 70
TG PAVDLSPW GAT VA+EAIT GA+
Sbjct: 171 TGSPAVDLSPWNGATEVAEEAITVGAI 91
Score = 89.5 bits (189), Expect(2) = 2e-29
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = -2 / -2
Query: 370 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDALNRPHLH 212
LT DE+NLAELEA HPLG+ QV++LLQ+ L GE WQVR GLELLDALN PHL+
Sbjct: 502 LTVDESNLAELEARHPLGSKQVLDLLQKILHGEWWQVR*GLELLDALNWPHLN 344
Score = 60.2 bits (125), Expect(2) = 2e-29
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -2 / -2
Query: 559 GDEADALHLTQVVEADDTXXXXXXXXXXXXXLIEHLCGVGAPEHRQLPH 413
GDEA+ LHL VVEADDT L+EHL G+GA EH QLPH
Sbjct: 691 GDEANQLHLPDVVEADDTDKGIGVGLLGLLELLEHLGGIGAAEHGQLPH 545
Score = 77.1 bits (162), Expect(3) = 1e-25
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / -1
Query: 449 WRRCTRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 318
W RC+RT AAST S+ RSTR +C +HGRR QPC*TRG+APTW
Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRRIQPC*TRGKAPTW 450
Score = 44.6 bits (91), Expect(3) = 1e-25
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -1 / -1
Query: 587 RTPRNPVA*RR*S*RTAPDAGCRSR*YGRRRQG 489
+TPRN A RR*S* TAP CRSR*YG+R +G
Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621
Score = 33.1 bits (66), Expect(3) = 1e-25
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 269 VASKTGSRTS*CPQSATP 216
VA GSRTS*CPQ ATP
Sbjct: 401 VAGTIGSRTS*CPQLATP 348
Score = 40.0 bits (81), Expect(4) = 2e-11
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 216 RCGRLRASRSSRPCLTCH 269
RCG+LRASRSSRP TCH
Sbjct: 348 RCGQLRASRSSRPYRTCH 401
Score = 38.2 bits (77), Expect(4) = 2e-11
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3 / +3
Query: 507 VSSASTTCVRCSASASSPSGHRVARSPARHKVQVEVTDIHAML 635
VSSASTT RCS ASSP+ +VARS K++ + + L
Sbjct: 639 VSSASTTSGRCS*LASSPTSPQVARSLVATKLRSSIALVDCCL 767
Score = 28.1 bits (55), Expect(4) = 2e-11
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / +3
Query: 414 CGSCLCSGAPTP 449
CGSC CS AP P
Sbjct: 546 CGSCPCSAAPMP 581
Score = 22.1 bits (42), Expect(4) = 2e-11
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 192 MAEGSDACR 218
MAEGS ACR
Sbjct: 213 MAEGSSACR 239
>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 2281
Score = 280 bits (605), Expect(2) = 8e-98
Identities = 106/125 (84%), Positives = 118/125 (94%)
Frame = +2 / +3
Query: 215 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYY 394
QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYY
Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 632
Query: 395 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 574
DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPG
Sbjct: 633 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 812
Query: 575 CEESG 589
CEESG
Sbjct: 813 CEESG 827
Score = 98.2 bits (208), Expect(2) = 8e-98
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2 / +2
Query: 62 RTTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSGSAGLSSVSNGGRIRCMQV 220
+ MAP+VMASSAT+VAPFQGLKSTAGLPV+RRS S+ +VSNGGRIRCMQV
Sbjct: 197 KLAMAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQV 355
Score = 194 bits (418), Expect(2) = 3e-59
Identities = 87/124 (70%), Positives = 96/124 (77%)
Frame = -3 / -1
Query: 588 PDSSQPGGLKAMKLTHCT*RRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 409
PDSSQPGGL AMKL +CT LSKPM+RT ASGY T VASVHPN+GSFH+V
Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647
Query: 408 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLMPS 229
QY PS*YPG+L SR T PTLLNS+QGTHL+R R S CF+R+S V GGK DRVSNFLMPS
Sbjct: 646 QYLPS*YPGDL*FSR*TNPTLLNSKQGTHLDRSRYSICFKRSSTVNGGKYDRVSNFLMPS 467
Query: 228 IGHT 217
IGHT
Sbjct: 466 IGHT 455
Score = 59.3 bits (123), Expect(2) = 3e-59
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3 / -2
Query: 150 TGRPAVDLSPWKGATVVADEAITAGAM 70
TGRPAVDLSPWKGAT VADEAIT GA+
Sbjct: 285 TGRPAVDLSPWKGATEVADEAITEGAI 205
Score = 152 bits (327), Expect(3) = 2e-44
Identities = 74/128 (57%), Positives = 93/128 (72%)
Frame = +1 / +2
Query: 208 MHAGVAD*GHQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 387
+ +GVAD*GH EVRD V+LA GGP EA +P P+ VGAL VQQG +RLP* Q+ R
Sbjct: 446 IQSGVAD*GH*EVRDSVVLAAIDSGGPFEADRVPAPI*VGALLGVQQGRIRLP*ESQITR 625
Query: 388 VLRRPILDNVEAAYVRVHRRHTGAQ*GRGGQKGVP*RLRPYHRLRQPASGAVRQLHRLQA 567
+L R +LD+VE A+V +HR H AQ RGG++G+P* LR +H L Q +GAV QLHR+ A
Sbjct: 626 IL*R*VLDHVETAHVWMHRCHPSAQGARGGKEGIP*CLRSHHWL*QR*AGAVNQLHRV*A 805
Query: 568 TGLRGVRQ 591
TGLRGVR+
Sbjct: 806 TGLRGVRR 829
Score = 35.9 bits (72), Expect(3) = 2e-44
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 70 HGPSRDGFVSHHRRPLPGAQVHRG 141
+G DGFV H R LPGAQVH G
Sbjct: 205 NGSLGDGFVGHLRGSLPGAQVHCG 276
Score = 29.5 bits (58), Expect(3) = 2e-44
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 193 WRKDQMHAGV 222
WRKDQMHAG+
Sbjct: 328 WRKDQMHAGI 357
Score = 74.4 bits (156), Expect(2) = 2e-22
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = -2 / -3
Query: 370 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDALNRPHL 215
LT DE++LAEL+A HPL ++QV++LLQ+ L + QVRQ LELL+ALNRPHL
Sbjct: 608 LTVDESDLAELQARHPLRSEQVLDLLQKVLHCQWRQVRQSLELLNALNRPHL 453
Score = 51.9 bits (107), Expect(2) = 2e-22
Identities = 24/53 (45%), Positives = 29/53 (54%)
Frame = -2 / -3
Query: 571 RWPEGDEADALHLTQVVEADDTXXXXXXXXXXXXXLIEHLCGVGAPEHRQLPH 413
RW DEAD LHL VV+A+D L+EHL G+GA +H Q PH
Sbjct: 809 RWLIRDEAD*LHLPNVVKANDANEGIRVCLLCLLELLEHLGGIGASKHGQFPH 651
Score = 56.5 bits (117), Expect(3) = 3e-19
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = -1 / -2
Query: 449 WRRCTRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPT 321
W RC +T A ST SS R S R C +HGRR +PC*T +APT
Sbjct: 687 WHRCIQTWAVSTWSSTYRHSIRVICDSHGRRIRPC*TPSKAPT 559
Score = 40.9 bits (83), Expect(3) = 3e-19
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 584 TPRNPVA*RR*S*RTAPDAGCRSR*YGRRRQG 489
TPRNPVA R*S* TAP C+S+* RR QG
Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727
Score = 35.0 bits (70), Expect(3) = 3e-19
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / -2
Query: 266 ASKTGSRTS*CPQSATP 216
AS T SRTS*CPQSATP
Sbjct: 504 ASTTESRTS*CPQSATP 454
Score = 35.9 bits (72), Expect(3) = 3e-06
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3 / +1
Query: 216 RCGRLRASRSSRPCLTC 266
RCGRLRA RSSR C TC
Sbjct: 454 RCGRLRALRSSRLCRTC 504
Score = 35.4 bits (71), Expect(3) = 3e-06
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 510 SSASTTCVRCSASASSPSGHRVARSPARHK 599
S A TT RCS SASS HRVARS A K
Sbjct: 748 SLALTTLGRCS*SASSRISHRVARSQAATK 837
Score = 23.5 bits (45), Expect(3) = 3e-06
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3 / +1
Query: 414 CGSCLCSGAPTP 449
CG+C C AP P
Sbjct: 652 CGNCPCLDAPMP 687
>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1248
Score = 277 bits (600), Expect(2) = 1e-97
Identities = 105/124 (84%), Positives = 117/124 (94%)
Frame = +2 / +2
Query: 218 VWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYD 397
VWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYYD
Sbjct: 515 VWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYD 694
Query: 398 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGC 577
GRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPGC
Sbjct: 695 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 874
Query: 578 EESG 589
EESG
Sbjct: 875 EESG 886
Score = 100 bits (212), Expect(2) = 1e-97
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +2 / +1
Query: 71 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSGSAGLSSVSNGGRIRCMQV 220
MAP+VMASSATTVAPFQGLKSTAG+PV+RRSG++ +VSNGGRIRCMQV
Sbjct: 265 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQV 414
Score = 210 bits (452), Expect(3) = 1e-63
Identities = 90/126 (71%), Positives = 103/126 (81%)
Frame = +1 / +1
Query: 208 MHAGVAD*GHQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 387
++ GVAD*GHQEVRDP+L AT H GGPPEA +P P QVGALPRVQQG +RLP* Q+PR
Sbjct: 505 VYLGVAD*GHQEVRDPLLPATAHRGGPPEADRVPAPFQVGALPRVQQGRIRLP*EPQIPR 684
Query: 388 VLRRPILDNVEAAYVRVHRRHTGAQ*GRGGQKGVP*RLRPYHRLRQPASGAVRQLHRLQA 567
+LR +LD+VEAA+VRVH RH GAQ RGGQ+GVP* +RPYHRLRQ +GA QLHRLQA
Sbjct: 685 ILRWQVLDHVEAAHVRVH*RHPGAQGARGGQEGVP*CIRPYHRLRQRQAGAAHQLHRLQA 864
Query: 568 TGLRGV 585
GLRGV
Sbjct: 865 PGLRGV 882
Score = 48.3 bits (99), Expect(3) = 1e-63
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 73 GPSRDGFVSHHRRPLPGAQVHR 138
GP RDG V HHRR LPGAQVHR
Sbjct: 267 GPLRDGVVGHHRRSLPGAQVHR 332
Score = 24.4 bits (47), Expect(3) = 1e-63
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 193 WRKDQMHAG 219
WR+DQ+HAG
Sbjct: 387 WRQDQVHAG 413
Score = 197 bits (425), Expect(2) = 5e-60
Identities = 90/124 (72%), Positives = 96/124 (77%)
Frame = -3 / -1
Query: 588 PDSSQPGGLKAMKLTHCT*RRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 409
PDSSQPGGL AMKL CT LSKPMIRT ASGY T VASVHPN+GSFH+V
Sbjct: 885 PDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMV 706
Query: 408 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLMPS 229
QY PS*YPG+L SR T PTLLNSRQGTHLER R S CFRR+S V GG+*+RVSNFLMPS
Sbjct: 705 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLERSRYSICFRRSSTVSGGR*ERVSNFLMPS 526
Query: 228 IGHT 217
IGHT
Sbjct: 525 IGHT 514
Score = 57.9 bits (120), Expect(2) = 5e-60
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3 / -2
Query: 150 TGRPAVDLSPWKGATVVADEAITAGAM 70
TG PAVDLSPWKGATVVAD+AIT GA+
Sbjct: 344 TGMPAVDLSPWKGATVVADDAITEGAI 264
Score = 97.3 bits (206), Expect(3) = 1e-33
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = -2 / -3
Query: 370 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDALNRPHLH 212
LT DE++LAELEAGHPLG +QV++LLQE L GE WQV +GLELLDALNRPHL+
Sbjct: 667 LTVDESDLAELEAGHPLGTEQVLDLLQEVLHGERWQVGEGLELLDALNRPHLN 509
Score = 63.8 bits (133), Expect(3) = 1e-33
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = -2 / -3
Query: 559 GDEADALHLTQVVEADDTXXXXXXXXXXXXXLIEHLCGVGAPEHRQLPH 413
GDEAD LHL VVEADDT L+EHL GV APEH QLPH
Sbjct: 856 GDEADELHLPDVVEADDTDECIRVRLLGLLELLEHLGGVSAPEHGQLPH 710
Score = 25.8 bits (50), Expect(3) = 1e-33
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -3
Query: 104 WWLTKPSRLGP 72
WW T PSR GP
Sbjct: 298 WWPTTPSRRGP 266
Score = 79.9 bits (168), Expect(3) = 3e-28
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -1 / -2
Query: 449 WRRCTRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 318
WR+CTRT AAST SS RS RG C +HGRR +PC*TRGRAPTW
Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRRIRPC*TRGRAPTW 615
Score = 46.4 bits (95), Expect(3) = 3e-28
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1 / -2
Query: 587 RTPRNPVA*RR*S*RTAPDAGCRSR*YGRRRQGT 486
+TPR+P A RR*S* AP CRSR*YGR QGT
Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQGT 783
Score = 37.3 bits (75), Expect(3) = 3e-28
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 269 VASKTGSRTS*CPQSATP 216
VA + GSRTS*CPQSATP
Sbjct: 566 VAGRRGSRTS*CPQSATP 513
Score = 41.8 bits (85), Expect(4) = 5e-13
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 216 RCGRLRASRSSRPCLTCH 269
RCGRLRASRSSRP TCH
Sbjct: 513 RCGRLRASRSSRPSPTCH 566
Score = 41.8 bits (85), Expect(4) = 5e-13
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3 / +3
Query: 507 VSSASTTCVRCSASASSPSGHRVARS 584
VSSASTT RCS+SASSP+ R ARS
Sbjct: 804 VSSASTTSGRCSSSASSPTSPRAARS 881
Score = 29.0 bits (57), Expect(4) = 5e-13
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 414 CGSCLCSGAPTP 449
CGSC CSGA TP
Sbjct: 711 CGSCPCSGALTP 746
Score = 21.7 bits (41), Expect(4) = 5e-13
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2 / +2
Query: 44 NPPSSLRTTMAPAVMASSATTVAPFQG 124
+PP + + APA AS+ + +A G
Sbjct: 323 SPPPACPSPAAPATPASATSAMAAGSG 403
>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast|
precursor, putative, expressed
Length = 1519
Score = 132 bits (283), Expect(2) = 2e-40
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = +2 / +3
Query: 353 GFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLR 532
G + R ++ PGYYDGRYWT+WKLPMFGC+DA VL EVEE ++EYPDA++R+I FD+ R
Sbjct: 750 GEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSR 929
Query: 533 QVQCVSFIAFRPPGCEES 586
Q QC+SF+ +PP S
Sbjct: 930 QCQCMSFVVHKPPSAAAS 983
Score = 57.9 bits (120), Expect(2) = 2e-40
Identities = 17/38 (44%), Positives = 31/38 (81%)
Frame = +2 / +2
Query: 239 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV 352
+++E +SYLPPL+ +++ K++++++ WVPCLEF KV
Sbjct: 491 RRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKV 604
Score = 69.3 bits (145), Expect(2) = 5e-14
Identities = 38/79 (48%), Positives = 42/79 (53%)
Frame = -3 / -1
Query: 585 DSSQPGGLKAMKLTHCT*RRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIVQ 406
+++ GGL K H R LSK M R ASGY T AS HPNIGSFH VQ
Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803
Query: 405 YRPS*YPGELLCSRKTKPT 349
Y PS*YPG L R P+
Sbjct: 802 YLPS*YPGIRLLLRWISPS 746
Score = 31.8 bits (63), Expect(2) = 5e-14
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3 / -2
Query: 351 TLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLM 235
TL NSRQGTH + S +RGG+*D S L+
Sbjct: 603 TLSNSRQGTHPLDMMNSISLEMDFALRGGR*DIASYLLL 487
Score = 58.3 bits (121), Expect(2) = 1e-08
Identities = 33/60 (55%), Positives = 36/60 (60%)
Frame = +1 / +2
Query: 388 VLRRPILDNVEAAYVRVHRRHTGAQ*GRGGQKGVP*RLRPYHRLRQPASGAVRQLHRLQA 567
VLRR +LD VEAA VR+ R GA G G +GVP RL P HRLRQ V L R QA
Sbjct: 785 VLRREVLDAVEAADVRML*RGGGAPGGGGMPEGVPGRLHPPHRLRQQPPVPVHVLRRPQA 964
Score = 24.9 bits (48), Expect(2) = 1e-08
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3 / +3
Query: 213 CRCGRLRASRSSRPCLTC 266
CR G L + +R CLTC
Sbjct: 465 CRHGTLSPTGGTRRCLTC 518
Score = 33.6 bits (67), Expect(2) = 0.004
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -1 / -2
Query: 446 RRCTRT*AASTLSSIGRRSTRGSCCAHGRRSQP 348
R+ RT AAST SS RRST S C G P
Sbjct: 843 RQSIRTSAASTASSTSRRSTPASGCCSGGSPPP 745
Score = 30.4 bits (60), Expect(2) = 0.004
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 349 LAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGL 248
L +LEA P ++LL +GLR +G QVR L
Sbjct: 601 LVKLEARDPSFGHDELDLLGDGLRAQGRQVRHRL 500
>LOC_Os01g10490:12001.t00923:unspliced-genomic meiosis 5, putative, expressed|
Length = 1374
Score = 33.6 bits (67), Expect(2) = 1.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 268 TPHHGGPPEAG*LPDPLQVGALP 336
TP HGG P G LP P GA P
Sbjct: 350 TPSHGGGPSGGALPSPSHGGAAP 418
Score = 21.7 bits (41), Expect(2) = 1.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 505 PYHRLRQPASGAVRQLHRLQ 564
P+ RLR+ GAV + RL+
Sbjct: 463 PWRRLRRRLPGAVPRWRRLR 522
>LOC_Os11g48000:12011.t04293:unspliced-genomic zinc finger, C2H2 type family protein, expressed|
Length = 1647
Score = 33.1 bits (66), Expect(2) = 1.2
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +1 / -3
Query: 391 LRRPILDNVEAAYVRVHRRHTGAQ*GRGGQKGVP*RLRPYHRLRQPASGAVRQLH 555
LRRP L EAA V R H A+ G G + L P RL +S R H
Sbjct: 706 LRRPELALAEAARVEARRPHAAAEVGVGRRIARERLLLPRRRLPDDSSSPCRSPH 542
Score = 22.1 bits (42), Expect(2) = 1.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2 / -2
Query: 194 GGRIRCMQVWPIEGIKK 244
GGR RC P + IKK
Sbjct: 1442 GGRERCKHAGPCKLIKK 1392
>LOC_Os04g26140:12004.t02321:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 8938
Score = 30.4 bits (60), Expect(2) = 1.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 513 SASTTCVRCSASASSPSGHRVAR 581
+A C+RC AS SSP+G V R
Sbjct: 3968 TAGLLCLRCWASTSSPTGRLVRR 4036
Score = 27.2 bits (53), Expect(2) = 1.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 201 GSDACRCGRLRASR 242
GS CRCGRLR R
Sbjct: 1570 GSYGCRCGRLRLHR 1611
>LOC_Os04g25610:12004.t02268:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3190
Score = 25.8 bits (50), Expect(2) = 1.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3 / +1
Query: 219 CGRLRASRSSRPCLTCH 269
CGR R SR R C T H
Sbjct: 2611 CGRKRLSRPPRSCRTHH 2661
Score = 25.4 bits (49), Expect(2) = 1.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2 / +3
Query: 134 TAGLPVSRRSGSAGLSSVSNGGRIRCMQVWP 226
++GLP+SRR + ++ GR+R P
Sbjct: 2541 SSGLPISRRGKKSWTRGRASAGRLRAKAT*P 2633
>LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like protein pDIR7, putative, expressed|
Length = 727
Score = 27.2 bits (53), Expect(2) = 1.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / -2
Query: 537 CSASASSPSGHRVARSPAR 593
C + SPSG R SPAR
Sbjct: 372 CPSGGRSPSGRRTCTSPAR 316
Score = 26.3 bits (51), Expect(2) = 1.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 213 CRCGRLRASRSSRP 254
CRCGR R +RSS P
Sbjct: 408 CRCGRRR*TRSSCP 367
>LOC_Os07g36070:12007.t03279:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3502
Score = 31.3 bits (62), Expect(2) = 2.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 513 SASTTCVRCSASASSPSGHRVAR 581
+A C RC ASASSP+G V+R
Sbjct: 390 TAGLLCRRCWASASSPTGRLVSR 322
Score = 24.0 bits (46), Expect(2) = 2.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1 / -1
Query: 253 PVLLATPHHGGPPEAG*LPDPLQVGALPRVQQG 351
P+ L+TP A P P GA P QG
Sbjct: 2854 PLTLSTPSTSSRSAASTPPSPSTTGAWPGYVQG 2756
>LOC_Os11g46020:12011.t04127:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 2553
Score = 29.5 bits (58), Expect(2) = 2.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1 / +3
Query: 104 WWLTKPSRLGPWWYVNC*VGCR*LAWQ 24
WWL + R PW + C R L+W+
Sbjct: 702 WWLLRRRRWRPWAWSRCSYWWRQLSWR 782
Score = 25.4 bits (49), Expect(2) = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3 / +2
Query: 756 HMHLPRPTLVGAYIHMLVYS 697
H+H+ R VGA H LV S
Sbjct: 653 HLHMQRVVAVGASTHALVAS 712
>LOC_Os12g11430:12012.t01018:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5279
Score = 33.1 bits (66), Expect = 2.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 513 SASTTCVRCSASASSPSGHRVAR 581
+A C RC AS SSP+GH V R
Sbjct: 4906 TAGLLCCRCWASTSSPTGHLVRR 4974
Score = 32.7 bits (65), Expect = 3.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3 / +1
Query: 513 SASTTCVRCSASASSPSGHRVAR 581
+A+ C RC AS SSP+G R+ R
Sbjct: 5173 TAALLCCRCWASTSSPTGRRIRR 5241
>LOC_Os01g03950:12001.t00284:unspliced-genomic alpha-D-xylosidase, putative, expressed|
Length = 4888
Score = 29.9 bits (59), Expect(2) = 3.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1 / +2
Query: 398 RRSTRGSCCAHGRRSQPC*TRGRAP 324
RRSTR +C RS C GR+P
Sbjct: 3893 RRSTRSTCTCSRTRSSRCSAAGRSP 3967
Score = 25.4 bits (49), Expect(2) = 3.1
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 603 ALYALPDSSQPGGLK 559
ALY L +++QPGG++
Sbjct: 1252 ALYGLGENTQPGGIR 1296
>LOC_Os08g23640:12008.t02136:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 1858
Score = 29.5 bits (58), Expect(2) = 3.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2 / -2
Query: 110 APFQGLKSTAGLPVSRRSGSAGLSSVSNGGRIRCMQVWP 226
APF ++TA ++R + + ++S +GGR+ C+ + P
Sbjct: 984 APFGWPRATAPSCLTRGTSNTFVASTPSGGRVSCLGLRP 868
Score = 24.4 bits (47), Expect(2) = 3.2
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2 / -3
Query: 374 NSSPGYYDGRYWTMWKLPMFGCTDA 448
N+S G + WTMW C A
Sbjct: 197 NASRGAVPSKLWTMWSAASRTCARA 123
>LOC_Os05g37700:12005.t03312:unspliced-genomic periplasmic beta-glucosidase precursor, putative, expressed|
Length = 4490
Score = 24.9 bits (48), Expect(2) = 3.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1 / -1
Query: 401 GRRSTRGSCCAHGRR 357
GRR R CC GRR
Sbjct: 470 GRRWRRRRCCGRGRR 426
Score = 24.9 bits (48), Expect(2) = 3.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3 / -1
Query: 372 CSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRG 268
C R P+ R G R R* C RRA RG
Sbjct: 371 CRRPCGPSRRRRRGGAGRSRRR*GRCRRRARRWRG 267
>LOC_Os04g48170:12004.t04336:unspliced-genomic cytochrome P450 87A3, putative, expressed|
Length = 4479
Score = 27.2 bits (53), Expect(2) = 3.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3 / +3
Query: 510 SSASTTCVRCSASASSPSGHRVARSPAR 593
SSA+TT C+AS +S S + S AR
Sbjct: 672 SSAATTSAPCTASCTSTSRRSCSGSTAR 755
Score = 22.6 bits (43), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2 / +2
Query: 488 YPDAYVRIIGFDNL 529
YPD + I G DN+
Sbjct: 650 YPDTFTEIFGRDNV 691
>LOC_Os01g37590:12001.t03301:unspliced-genomic peptide transporter PTR2, putative, expressed|
Length = 2275
Score = 27.6 bits (54), Expect(2) = 3.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2 / +2
Query: 50 PSSLRTTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSGSAGLSSVSNGGR 202
P+S + APA + ++ AP +TAG S S SS S R
Sbjct: 713 PASTSSPSAPAASSPASPASAPTSSTTATAGSAPPWASSSTASSSSSASAR 865
Score = 26.3 bits (51), Expect(2) = 3.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1 / +3
Query: 235 HQEVRDPVLLATPHHGGPPEAG*LPDP 315
H D +L HH GPP L DP
Sbjct: 1320 HLRADDHLLRGAGHHHGPPRRRRLRDP 1400
>LOC_Os08g44680:12008.t04191:unspliced-genomic photosystem I reaction center subunit II, chloroplast precursor,|
putative, expressed
Length = 1006
Score = 25.8 bits (50), Expect(2) = 3.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1 / +1
Query: 443 RCTRT*AASTLSSIGRRSTRGSCCAHGRR 357
R R+ A + S GRR R S +HGRR
Sbjct: 337 RRPRSSAGARGDSSGRRRWRSSTSSHGRR 423
Score = 24.0 bits (46), Expect(2) = 3.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 251 SRTS*CPQSATPAC 210
SR S CP++A P+C
Sbjct: 430 SRCSRCPRAAPPSC 471
>LOC_Os03g41438:12003.t03558:unspliced-genomic protein Z, putative, expressed|
Length = 13733
Score = 31.8 bits (63), Expect(2) = 4.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 513 SASTTCVRCSASASSPSGHRVARSPAR 593
SAST+C CSA+A SPS +P R
Sbjct: 341 SASTSCTTCSANACSPSAVPRPGTPRR 261
Score = 24.4 bits (47), Expect(2) = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3 / -2
Query: 21 SLPS*LSATHLAVYVPPWPQP*WLRQ 98
SLP S +H+ ++ PWP LR+
Sbjct: 4801 SLPGPPSLSHVPHFLRPWPPSCCLRE 4724
>LOC_Os05g02870:12005.t00185:unspliced-genomic ATPase, coupled to transmembrane movement of substances, putative|
Length = 2043
Score = 26.7 bits (52), Expect(2) = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2 / +2
Query: 56 SLRTTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSGSAGLSSVS 190
S RT APA SSA++ +P S+A P + ++ +S S
Sbjct: 443 SRRTRSAPASTRSSASSASPAPRTPSSATRPTAACPAASAAASPS 577
Score = 26.7 bits (52), Expect(2) = 4.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3 / +2
Query: 510 SSASTTCVRCSASASSPSGHRVARSPARHKVQVEVTD 620
SS S T CS+S++ HR A S + V+D
Sbjct: 890 SSTSPTAPPCSSSSAQDGNHRSALSWTPRTTRTAVSD 1000
>LOC_Os04g26030:12004.t02310:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 4384
Score = 32.2 bits (64), Expect = 5.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 513 SASTTCVRCSASASSPSGHRVAR 581
+A C RC AS SSP+G R+ R
Sbjct: 3832 TAGLLCCRCWASTSSPTGRRIRR 3900
Score = 31.3 bits (62), Expect = 9.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 513 SASTTCVRCSASASSPSGHRVAR 581
+AS C RC AS SSP+G V R
Sbjct: 3743 TASLLCCRCWASTSSPTGRLVRR 3811
>LOC_Os04g11810:12004.t01005:unspliced-genomic acyltransferase, putative, expressed|
Length = 1326
Score = 28.6 bits (56), Expect(2) = 5.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1 / -1
Query: 505 PYHRLRQPASGAVRQLHRLQATGLRGVRQGIK 600
P H +PA+G +R LH Q GL R+ ++
Sbjct: 486 PRHADDEPAAGELRHLHEQQRVGLGLSRRRVR 391
Score = 24.0 bits (46), Expect(2) = 5.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 94 VSHHRRPLPGAQVHR 138
++HH R P A+VHR
Sbjct: 1194 MAHHPRRPPAAEVHR 1150
>LOC_Os01g36090:12001.t03159:unspliced-genomic DNA-damage-repair/toleration protein DRT102, putative, expressed|
Length = 1616
Score = 25.4 bits (49), Expect(2) = 6.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1 / -2
Query: 545 RTAPDAGCRSR*YGRRRQGTXXXXXXXXXXPVWRRCTR 432
R+ AGCR RRR GT WRR R
Sbjct: 493 RSRRSAGCRRARGRRRRPGTGRGTGWRARRRRWRRRRR 380
Score = 23.5 bits (45), Expect(2) = 6.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1 / -2
Query: 395 RSTRGSCCAHGRRSQPC 345
R RG+C RR +PC
Sbjct: 289 RRRRGTCWRRWRRRRPC 239
>LOC_Os05g15880:12005.t01359:unspliced-genomic xylanase inhibitor protein 2 precursor, putative, expressed|
Length = 1164
Score = 25.8 bits (50), Expect(2) = 7.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 433 RVHRRHTGAQ*GRGGQKGVP*RLRPYHR 516
R HR H G + GRG +G R YHR
Sbjct: 143 RRHRDHLGPEQGRGLPQGGLRRRPLYHR 226
Score = 23.1 bits (44), Expect(2) = 7.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 546 SASSPSGHRVARSPAR 593
S+SSPS R A +P+R
Sbjct: 346 SSSSPSAARAASTPSR 393
>LOC_Os09g27420:12009.t02421:unspliced-genomic formate--tetrahydrofolate ligase, putative, expressed|
Length = 4198
Score = 27.2 bits (53), Expect(2) = 8.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 64 YHHGPSRDGFVSHHRRPLPGA 126
+H +R G V HHR +PGA
Sbjct: 905 HHADAARGGQVDHHRWAVPGA 967
Score = 26.3 bits (51), Expect(2) = 8.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 673 FTSCSNHM*IYEHMYVSTYQRRS 741
F SC++H ++ +YVS + RS
Sbjct: 1471 FVSCNSHDRLHGSLYVSNHHERS 1539
>LOC_Os03g41980:12003.t03606:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6161
Score = 29.9 bits (59), Expect(2) = 9.0
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2 / +3
Query: 110 APFQGLKSTAGLPVSRRSGSAGLSSVSNGGRIRCMQVWP 226
APF ++TA ++R + + ++S +GGR+ C+ + P
Sbjct: 5841 APFGWPRATAQSCLTRGTSNTFVASTPSGGRVSCLGLGP 5957
Score = 24.0 bits (46), Expect(2) = 9.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +2
Query: 67 HHGPSRDGFVSHHRRPLP 120
H P + G SH R P P
Sbjct: 4577 HRAPLKKGLPSHRRDPTP 4630
>LOC_Os02g53200:12002.t04899:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed|
Length = 3132
Score = 28.1 bits (55), Expect(2) = 9.1
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1 / -3
Query: 253 PVLLATPHHGGPPEAG*LPDPLQVGALP 336
P + HH P + P P GALP
Sbjct: 1393 PAMAFATHHASPVDVAFTPPPAPAGALP 1310
Score = 24.9 bits (48), Expect(2) = 9.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2 / -3
Query: 74 APAVMASSATTVAPFQGLKSTAGLPVSRRSG 166
A A + S TVA Q + ++ LP+S +G
Sbjct: 2650 AAAALLQSFATVASVQTVDGSSHLPISANNG 2558
>LOC_Os07g33310:12007.t03011:unspliced-genomic transparent testa 12 protein, putative, expressed|
Length = 3216
Score = 28.6 bits (56), Expect(2) = 9.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / +2
Query: 449 WRRCTRT*AASTLSSIGRR 393
WRRCTR +AS+ S RR
Sbjct: 635 WRRCTRARSASSSCSASRR 691
Score = 24.4 bits (47), Expect(2) = 9.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1 / +2
Query: 398 RRSTRGSCCAHGRRSQPC*TRGRAPTW 318
RR++R +C + GRR R P W
Sbjct: 821 RRASRSTCRSAGRRCGCSAWASRGPPW 901
>LOC_Os10g33540:12010.t02655:unspliced-genomic alcohol oxidase, putative, expressed|
Length = 2411
Score = 26.3 bits (51), Expect(2) = 9.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3 / -3
Query: 510 SSASTTCVRCSASASSPSGHRVARSP 587
S A TTC SASA SP R P
Sbjct: 1947 SRAPTTCPSSSASAPSPRSPRRGTPP 1870
Score = 26.3 bits (51), Expect(2) = 9.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / -3
Query: 627 AMLVHIGRSVALLSQFYFLFQSYVNIR 707
A L H GRS+ +S + LF NIR
Sbjct: 276 AQLFH*GRSIFSVSHYKILFSPSQNIR 196
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 314,933,614
Number of extensions: 4908127
Number of successful extensions: 28969
Number of sequences better than 10.0: 132
Length of query: 294
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 245
Effective length of database: 52,856,264
Effective search space: 12949784680
Effective search space used: 12949784680
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)