ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65l02 |
|---|---|
| Clone Library Name | barley_pub |
>AB091471:Os05g0245300 | Length = 162 Score = 171 bits (433), Expect = 6e-43 Identities = 81/162 (50%), Positives = 104/162 (64%) Frame = +2 Query: 92 MAKLHRLXXXXXXXXXXXXXXXXXXXXXXXXETTNLFGLEIEAKFSHIPSFIFFXXXXXX 271 MAK+HRL ETT+ FG+++EAK+S+ PSFIFF Sbjct: 1 MAKVHRLMNAVLRLAAAAAAATAAVVMVTSRETTSFFGIQMEAKYSYTPSFIFFVVAYAV 60 Query: 272 XXXXXXXXXXXPPGGAASRLLVMTDVVMGMVLTGAVAATGAIAEVGRNGNSHAGWLPICE 451 P G A SRL + TDVV+GMVL GAVA+ GAI+++ +NGNSHAGWLP+C Sbjct: 61 AAAYSLLVLAVPAGSALSRLALTTDVVLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCG 120 Query: 452 EVHGYCNQVMGALIAGFVALVVYFLIIMHSLHAVTDTMCPCH 577 ++H YCN VM ALIAGFVAL V+F+++M+SLH VTD +CPCH Sbjct: 121 QIHAYCNHVMAALIAGFVALAVHFVVVMYSLHIVTDVICPCH 162
>AK062426:Os01g0237000 | Length = 162 Score = 113 bits (282), Expect = 2e-25 Identities = 53/121 (43%), Positives = 82/121 (67%), Gaps = 2/121 (1%) Frame = +2 Query: 197 LFGLEIEAKFSHIPSFIFFXXXXXXXXXXXXXXXXXPPGGA--ASRLLVMTDVVMGMVLT 370 ++G+E++AKF + PS +FF P + A+RLL+M DVV+GMVL Sbjct: 38 VYGMEVQAKFRYTPSLVFFVAANAAVSACSLVVLLVPSSTSKLAARLLLMADVVLGMVLA 97 Query: 371 GAVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVALVVYFLIIMHSLHA 550 GA AA GA+AE+G+NGNSHAGW+ IC +V +C++V AL+AG +V+Y+L++M+S++ Sbjct: 98 GAFAAAGAMAELGKNGNSHAGWIAICVQVPLFCDRVRSALVAGSATIVLYYLMLMYSIYT 157 Query: 551 V 553 + Sbjct: 158 L 158
>Os04g0460400:Os04g0460400 | Length = 193 Score = 62.4 bits (150), Expect = 4e-10 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 7/123 (5%) Frame = +2 Query: 206 LEIEAKFSHIPSFIFFXXXXXXXXXXXXXXXXXP------PGGAASRL-LVMTDVVMGMV 364 ++ EAK+S +PSF FF P SRL LV D M + Sbjct: 67 IQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRPRARYSRLFLVFFDTAMLAL 126 Query: 365 LTGAVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVALVVYFLIIMHSL 544 LT +A AI + GN A W IC++ +C ++ G+LI F A+V+ ++I S Sbjct: 127 LTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIGSFAAMVLLVVLITLSA 186 Query: 545 HAV 553 A+ Sbjct: 187 FAL 189
>AK105205:Os04g0684300 | Length = 66 Score = 52.8 bits (125), Expect = 3e-07 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = +2 Query: 374 AVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVALVV-YFLIIM 535 A +A AI ++ NGN A W+ IC + HG+C + G+++A F+ +V+ FL+I+ Sbjct: 4 AASAAAAIVDLAHNGNLRANWVAICMQFHGFCQRTSGSVVASFLTVVILMFLVIL 58
>AK073789:Os12g0610800 | Length = 195 Score = 51.2 bits (121), Expect = 9e-07 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 3/114 (2%) Frame = +2 Query: 218 AKFSHIPSFIFFXXXXXXXXXXXXXXXXXP---PGGAASRLLVMTDVVMGMVLTGAVAAT 388 AKF P+F+FF A S + + D+V+ +L A Sbjct: 72 AKFKDTPAFVFFVIANAIASGYNLMVLVTRRILQRRAQSLSVHLLDMVILTLLATGSATA 131 Query: 389 GAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVALVVYFLIIMHSLHA 550 ++A++G+NGN HA W PIC++ +CN AL++ F+ + + + + S A Sbjct: 132 ASMAQLGKNGNLHARWNPICDKFGSFCNHGGIALVSSFIGVALMLALNLLSAAA 185
>AK073296:Os07g0442900 | Length = 207 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = +2 Query: 332 LVMTDVVMGMVLTGAVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVAL 511 L++ DV V+ A GA+A VG GNSH W IC +C + + +A Sbjct: 129 LILLDVFYAAVMASATGTAGAVAWVGLKGNSHTRWNKICNVYGKFCRHIGSSTFLALIAA 188 Query: 512 VVYFLI 529 +V L+ Sbjct: 189 IVLVLL 194
>AK060356:Os01g0363300 | Length = 215 Score = 44.3 bits (103), Expect = 1e-04 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Frame = +2 Query: 212 IEAKFSHIPSFIFFXXXXXXXXXXXXXXXXXPPGGAASRLLVMTDVVMGMVLTGAVAATG 391 + AK+++ +F++F +A +++ D+V +L AV A Sbjct: 95 VTAKWTYSSAFVYFVVANAMVFAFSAAALAAVRRRSAVVPVMVGDLVAMALLFSAVGAAA 154 Query: 392 AIAEVGRNGNSHAGWLPICEEVHGYCNQVMG----ALIAGFVALVVYFLIIM 535 +G GN+H W +C+ +C + M ALIA F LV+ L I+ Sbjct: 155 QFGLLGERGNAHVRWAKVCDVYGPFCERAMAAVVVALIAAFADLVLLMLTIL 206
>AK059622:Os01g0363300 | Length = 215 Score = 44.3 bits (103), Expect = 1e-04 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%) Frame = +2 Query: 212 IEAKFSHIPSFIFFXXXXXXXXXXXXXXXXXPPGGAASRLLVMTDVVMGMVLTGAVAATG 391 + AK+++ +F++F +A +++ D+V +L AV A Sbjct: 95 VTAKWTYSSAFVYFVVANAMVFAFSAAALAAVRRRSAVVPVMVGDLVAMALLFSAVGAAA 154 Query: 392 AIAEVGRNGNSHAGWLPICEEVHGYCNQVMG----ALIAGFVALVVYFLIIM 535 +G GN+H W +C+ +C + M ALIA F LV+ L I+ Sbjct: 155 QFGLLGERGNAHVRWAKVCDVYGPFCERAMAAVVVALIAAFADLVLLMLTIL 206
>Os08g0536200:Os08g0536200 | Length = 168 Score = 37.7 bits (86), Expect = 0.010 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +2 Query: 344 DVVMGMVLTGAVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVALVV 517 D V+ + A A GAI + GN +GW +C YCN AL A+++ Sbjct: 94 DAVVVNLEAAATAGAGAIGSIAMWGNEASGWYAVCRLYRRYCNAGAAALALSLAAVLL 151
>AK061149:Os04g0281900 | Length = 209 Score = 34.3 bits (77), Expect = 0.11 Identities = 18/83 (21%), Positives = 36/83 (43%) Frame = +2 Query: 323 SRLLVMTDVVMGMVLTGAVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGF 502 S ++ + D V ++ A AA+ + + NG+ W C G+C Q ++ F Sbjct: 110 SWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGVFGGFCRQARTSVAITF 169 Query: 503 VALVVYFLIIMHSLHAVTDTMCP 571 ++ Y L+ + S + + P Sbjct: 170 ASVACYILLSLISSYRLFSAYDP 192
>AK066544:Os07g0102100 | Length = 808 Score = 33.5 bits (75), Expect = 0.19 Identities = 19/44 (43%), Positives = 23/44 (52%) Frame = +3 Query: 213 SRPSSPTFPHLSSSWLPTPWHASTACSSSSCRQGAPPRDCSS*P 344 S PSSP P +SS P +ST+ S+S R APP S P Sbjct: 86 STPSSPATPRSASSPTSRPRTSSTSTSASPPRSAAPPSSASPPP 129
>Os03g0196400:Os03g0196400 | Length = 238 Score = 32.0 bits (71), Expect = 0.56 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = +2 Query: 347 VVMGMVLTGAVAATGAIAEVGRNGNSHAGWLPICEEVHGYCNQVMGALIAGFVALV 514 +VM ++ AVAA A +G+ G W+ C +C Q G + A V Sbjct: 148 LVMAYIVISAVAAAMEAALIGKYGQPEFQWMKTCHLYKRFCAQAGGGVACAIAASV 203
>AK064916:Os07g0529600 | Length = 402 Score = 30.4 bits (67), Expect = 1.6 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = +1 Query: 415 RQLARRVAADLRGGARLLQPGHGSPHRRLRRAGRLLPH--------HHALPPRG 552 R++ARR A GGA+ P RR+RRAG L H H PP G Sbjct: 142 RRVARRAAVLRHGGAQAGAPVPRRARRRVRRAGGLRRHQARRALHLHRHEPPPG 195
>Os12g0586400:Os12g0586400 | Length = 566 Score = 29.3 bits (64), Expect = 3.6 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 198 CSAWKSRPSSPTFPHLSSSWLPTP 269 CS +++R + P F HLS+S P P Sbjct: 432 CSVYEARETKPKFSHLSASLCPLP 455
>Os09g0446200:Os09g0446200 | Length = 841 Score = 29.3 bits (64), Expect = 3.6 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -3 Query: 513 TSATKPAMRAPMTWLQ*PCTSSQIGSHPACELPFLPTSAIAPVAATAPVSTIPITTSVMT 334 ++ ++PA P+ +L +S + + A LP LPT+A A + + Sbjct: 83 SARSRPASLWPLLYLLDSLSSHRRAAAAASCLPNLPTAAPPRAAGSGAAAAAAAAGGKPA 142 Query: 333 SSLEAAPPGG 304 S APPGG Sbjct: 143 SRAPGAPPGG 152
>AK073420:Os03g0240900 | Length = 571 Score = 29.3 bits (64), Expect = 3.6 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 198 CSAWKSRPSSPTFPHLSSSWLPTP 269 CS +++R + P F HLS+S P P Sbjct: 437 CSVYEARETKPKFSHLSASLCPLP 460
>Os03g0845100:Os03g0845100 | Length = 768 Score = 28.9 bits (63), Expect = 4.8 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 412 ERQLARRVAADLRGGARLLQPGHGSPHRRLRRAGRLLPH-HHALPPRGHRYHVSVPL 579 +R+LA A D G ++ Q SPH R GR H HH + P H V +P+ Sbjct: 578 KRELADDDADDTAGDSQ--QRARASPHSSERAGGRACNHRHHLVQPLNHT-EVRIPI 631
>AK107635:Os09g0572500 | Length = 541 Score = 28.9 bits (63), Expect = 4.8 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Frame = -3 Query: 510 SATKPAMRAPM--------TWLQ*PCTSSQIGSHPACELPFLPTSAIAPVAATAPVSTIP 355 S+T PA RAP + PCT + S AC P PTS +P + P + Sbjct: 396 SSTPPAPRAPAISSSSGSSSRTSCPCTGPRPRSS-ACSRPPAPTSGSSPTSEATPTPS-- 452 Query: 354 ITTSVMTSSLEAAPPG 307 TSS PPG Sbjct: 453 ------TSSQLIPPPG 462
>AK099793:Os05g0563400 | Length = 264 Score = 28.9 bits (63), Expect = 4.8 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 9/52 (17%) Frame = +1 Query: 424 ARRVAADLRGGARLLQPGHG-SPHRRLRRAG--------RLLPHHHALPPRG 552 AR AA+ RG R+ G +P RR R G RLLP PPRG Sbjct: 120 ARGAAAEERGRRRVPAAGASRAPRRRARGGGGRGRRAAARLLPRRRRHPPRG 171
>AB071290:Os05g0563400 | Length = 223 Score = 28.9 bits (63), Expect = 4.8 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 9/52 (17%) Frame = +1 Query: 424 ARRVAADLRGGARLLQPGHG-SPHRRLRRAG--------RLLPHHHALPPRG 552 AR AA+ RG R+ G +P RR R G RLLP PPRG Sbjct: 79 ARGAAAEERGRRRVPAAGASRAPRRRARGGGGRGRRAAARLLPRRRRHPPRG 130
>Os03g0416400:Os03g0416400 | Length = 500 Score = 28.5 bits (62), Expect = 6.2 Identities = 19/48 (39%), Positives = 20/48 (41%) Frame = +1 Query: 415 RQLARRVAADLRGGARLLQPGHGSPHRRLRRAGRLLPHHHALPPRGHR 558 R L RR RG R GHG PHRR P +PPR R Sbjct: 342 RPLRRRAHGHRRGVGR--GGGHGQPHRRRHHPSP--PQQVGVPPRRRR 385
>AK120510: | Length = 632 Score = 28.5 bits (62), Expect = 6.2 Identities = 17/43 (39%), Positives = 18/43 (41%) Frame = +3 Query: 198 CSAWKSRPSSPTFPHLSSSWLPTPWHASTACSSSSCRQGAPPR 326 C+A KS PS P S P C SSS APPR Sbjct: 299 CAAIKSVPSPGGTPAASRGLPGWPGFCGVGCGSSSSSSFAPPR 341
>AK110203: | Length = 1316 Score = 28.5 bits (62), Expect = 6.2 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +1 Query: 415 RQLARRVAADLRGGARLLQPGHGSPHRRLRRAGRLLPHHHALPPRGHRYH 564 R++AR +A+ R + HG PH PHHHA H H Sbjct: 525 RKMARSIASASRSSSPRRWIHHG-PHSSADARDHSTPHHHAWERSSHMLH 573
>AK103326:Os01g0111900 | Length = 212 Score = 28.5 bits (62), Expect = 6.2 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +3 Query: 204 AWKSRPSSPTFPHLSSSWLPTPWHASTACSSSSCRQ--GAPPR 326 A S+ SS P +S PWH +C ++SC +PPR Sbjct: 3 AHSSKKSSELLPSISR-----PWHGGYSCRAASCSSSCSSPPR 40
>AK070697:Os11g0459200 | Length = 248 Score = 28.5 bits (62), Expect = 6.2 Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 8/64 (12%) Frame = +1 Query: 412 ERQLARRVAADLRGGARLLQPGHGSP--------HRRLRRAGRLLPHHHALPPRGHRYHV 567 E L R AD G PGH +P HRRL + H P G R V Sbjct: 7 EAYLVRLSGADAPDGQVHHPPGHEAPPHHLPRHRHRRLTSPAEAVHRAHHHPVEGLRAGV 66 Query: 568 SVPL 579 VPL Sbjct: 67 HVPL 70
>Os11g0243300:Os11g0243300 | Length = 476 Score = 28.1 bits (61), Expect = 8.1 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +1 Query: 448 RGGARLLQPGHGSPHRRLRRAGRLLPHHHALPPRGHRYHVSVPLTTSIL 594 + G LL G G P+ A R LP PP GH +H + + +++ Sbjct: 287 KNGGGLLVAG-GDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMPLNMI 334
>Os01g0346900:Os01g0346900 | Length = 444 Score = 28.1 bits (61), Expect = 8.1 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +1 Query: 520 LPHHHALPPRGHRYHVSVPLTTSILVL 600 +PH H LP Y +++P+T S++ L Sbjct: 148 IPHQHLLPQFAPTYTLAIPITPSLMPL 174
>AK103728: | Length = 432 Score = 28.1 bits (61), Expect = 8.1 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -3 Query: 432 PACELPFLPTSAIAPV--AATAPVSTIPITTSVMTSSLEAAP 313 P+ + P T AP A AP +T+P+T S T + A+P Sbjct: 91 PSNQAPPTQTVPAAPASQAPVAPATTVPVTVSAPTPTATASP 132
>U63530:Os09g0407200 | Length = 392 Score = 28.1 bits (61), Expect = 8.1 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -3 Query: 432 PACELPFLPTSAIAPV--AATAPVSTIPITTSVMTSSLEAAP 313 P+ + P T AP A AP +T+P+T S T + A+P Sbjct: 91 PSNQAPPTQTVPAAPASQAPVAPATTVPVTVSAPTPTATASP 132
>AK103130:Os09g0407200 | Length = 392 Score = 28.1 bits (61), Expect = 8.1 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -3 Query: 432 PACELPFLPTSAIAPV--AATAPVSTIPITTSVMTSSLEAAP 313 P+ + P T AP A AP +T+P+T S T + A+P Sbjct: 91 PSNQAPPTQTVPAAPASQAPVAPATTVPVTVSAPTPTATASP 132
>AK102832:Os01g0750600 | Length = 682 Score = 28.1 bits (61), Expect = 8.1 Identities = 19/69 (27%), Positives = 24/69 (34%) Frame = -3 Query: 516 TTSATKPAMRAPMTWLQ*PCTSSQIGSHPACELPFLPTSAIAPVAATAPVSTIPITTSVM 337 T T P + AP P + + P P P P PVS P+T + Sbjct: 19 TPPVTPPPVTAPP-----PVSPPPVTPPPVTPPPVSPPPVSPPPVTPPPVSPPPVTPPPV 73 Query: 336 TSSLEAAPP 310 T APP Sbjct: 74 TPPTPVAPP 82
>AK064397:Os01g0750600 | Length = 682 Score = 28.1 bits (61), Expect = 8.1 Identities = 19/69 (27%), Positives = 24/69 (34%) Frame = -3 Query: 516 TTSATKPAMRAPMTWLQ*PCTSSQIGSHPACELPFLPTSAIAPVAATAPVSTIPITTSVM 337 T T P + AP P + + P P P P PVS P+T + Sbjct: 19 TPPVTPPPVTAPP-----PVSPPPVTPPPVTPPPVSPPPVSPPPVTPPPVSPPPVTPPPV 73 Query: 336 TSSLEAAPP 310 T APP Sbjct: 74 TPPTPVAPP 82 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,690,480 Number of extensions: 473201 Number of successful extensions: 1892 Number of sequences better than 10.0: 32 Number of HSP's gapped: 1878 Number of HSP's successfully gapped: 32 Length of query: 285 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 185 Effective length of database: 11,395,755 Effective search space: 2108214675 Effective search space used: 2108214675 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
