ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf66o21 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g25850:12005.t02240:unspliced-genomic superoxide dismutase, mitochondrial precursor, putative, expressed| Length = 4786 Score = 156 bits (335), Expect(7) = 4e-95 Identities = 62/67 (92%), Positives = 64/67 (95%) Frame = +1 / +2 Query: 166 LPDLPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQLDAAVGKGDASGVVHLQSA 345 LPDLPYDYGALEPA+SGEIMRLHHQKHHATYVANYNKALEQLDAAV KGDA +VHLQSA Sbjct: 179 LPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKGDAPAIVHLQSA 358 Query: 346 IKFNGGG 366 IKFNGGG Sbjct: 359 IKFNGGG 379 Score = 98.2 bits (208), Expect(7) = 4e-95 Identities = 38/49 (77%), Positives = 42/49 (85%) Frame = +1 / +3 Query: 391 KNLKPISEGGGEPPHGKLGWAIDEDFGSIEKLIKKMNAEGAALQGSGWV 537 K L + EGGG+PPH KLGWAIDEDFGS E L+KKM+AEGAALQGSGWV Sbjct: 2613 KILGVLQEGGGDPPHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWV 2759 Score = 67.5 bits (141), Expect(7) = 4e-95 Identities = 26/27 (96%), Positives = 26/27 (96%) Frame = +1 / +2 Query: 592 QDPLVTKGANLYPLLGIDVWEHAYYLQ 672 QDPLVTKGANL PLLGIDVWEHAYYLQ Sbjct: 3674 QDPLVTKGANLVPLLGIDVWEHAYYLQ 3754 Score = 48.7 bits (100), Expect(7) = 4e-95 Identities = 21/33 (63%), Positives = 26/33 (78%) Frame = +3 / +3 Query: 669 AVQEREAGLPDQHLEGGELEIRRRGV*ESACVI 767 AVQE +A LP+QHLEG ELEIRR GV + C++ Sbjct: 4404 AVQECQARLPEQHLEGDELEIRRGGVRKCDCLM 4502 Score = 44.1 bits (90), Expect(7) = 4e-95 Identities = 18/19 (94%), Positives = 18/19 (94%) Frame = +1 / +3 Query: 538 WLALDKEAKKLSVETTPNQ 594 WLALDKEAKKLSVETT NQ Sbjct: 2856 WLALDKEAKKLSVETTANQ 2912 Score = 42.8 bits (87), Expect(7) = 4e-95 Identities = 15/16 (93%), Positives = 15/16 (93%) Frame = +1 / +3 Query: 364 GHVNHSIFWKNLKPIS 411 GHVNHSIFW NLKPIS Sbjct: 2478 GHVNHSIFWNNLKPIS 2525 Score = 22.6 bits (43), Expect(7) = 4e-95 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = +3 / +1 Query: 81 SHGAPHVG 104 SHGAPH G Sbjct: 79 SHGAPHAG 102 Score = 66.1 bits (138), Expect(7) = 6e-54 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = -1 / -3 Query: 773 KSNHASTFSYSSPAYFQFTTFQMLVR*SGLTFLYC 669 + + A FSY+SPAYFQF TFQML+R*SGLTFLYC Sbjct: 4508 RQHQAVAFSYTSPAYFQFITFQMLLR*SGLTFLYC 4404 Score = 62.0 bits (129), Expect(7) = 6e-54 Identities = 25/33 (75%), Positives = 26/33 (78%) Frame = -3 / -3 Query: 510 TLCIHLLYKFLNRTKILINGPAKFAMRWLTTTL 412 T C HLLYK L TKILINGPAKF M W+TTTL Sbjct: 2732 TFCTHLLYKCLK*TKILINGPAKFCMWWITTTL 2634 Score = 56.1 bits (116), Expect(7) = 6e-54 Identities = 22/26 (84%), Positives = 23/26 (88%) Frame = -1 / -2 Query: 671 CR*YACSQTSIPNKGYRFAPLVTRGS 594 CR*YACSQTSIPNKG + AP VTRGS Sbjct: 3753 CR*YACSQTSIPNKGTKLAPFVTRGS 3676 Score = 50.6 bits (104), Expect(7) = 6e-54 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = -1 / -2 Query: 257 *VAWCFWWCRRMISPETA 204 *VAWCFWWCRRMISPE A Sbjct: 270 *VAWCFWWCRRMISPEMA 217 Score = 36.3 bits (73), Expect(7) = 6e-54 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = -1 / -1 Query: 590 LGVVSTESFLASLSKASH 537 L VVSTESF ASLSKASH Sbjct: 2908 LAVVSTESFFASLSKASH 2855 Score = 34.5 bits (69), Expect(7) = 6e-54 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -2 / -3 Query: 121 LGFSSWPTCGAPWL 80 LGFSS P CGAPWL Sbjct: 119 LGFSSRPACGAPWL 78 Score = 33.6 bits (67), Expect(7) = 6e-54 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -3 / -1 Query: 375 VNMTAAVEFDGALEVDDAGRVPL 307 + +T+AVE DGALEV D G V L Sbjct: 388 LGLTSAVELDGALEVHDGGGVAL 320 Score = 91.3 bits (193), Expect(6) = 3e-41 Identities = 32/41 (78%), Positives = 36/41 (87%) Frame = +3 / +2 Query: 414 GWW*ATSWQTWLGH**GFWFY*ETYKEDECRGCCFTRVWMG 536 GWW*+T+ +TWLGH**GFWF * T KEDECR CCFTR+WMG Sbjct: 2636 GWW*STTCKTWLGH**GFWFI*GTCKEDECRRCCFTRIWMG 2758 Score = 73.0 bits (153), Expect(6) = 3e-41 Identities = 30/46 (65%), Positives = 35/46 (76%) Frame = +1 / +1 Query: 628 PLLGIDVWEHAYYLQYKNVRPDYLTNIWKVVNWKYAGEEYEKVLA* 765 PLL ++ +LQYKNVRPDYL+NIWKV+NWKYAGE YE A* Sbjct: 4363 PLLLLNSLH*FPWLQYKNVRPDYLSNIWKVMNWKYAGEVYENATA* 4500 Score = 30.4 bits (60), Expect(6) = 3e-41 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = +3 / +2 Query: 537 VASFG*RGQKAFS*NYS*SGPS 602 VASFG*RG++AFS N * G S Sbjct: 2855 VASFG*RGKEAFSGNNC*PGES 2920 Score = 29.9 bits (59), Expect(6) = 3e-41 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +3 / +1 Query: 219 DHAPAPPEAP 248 DHAPAPPEAP Sbjct: 232 DHAPAPPEAP 261 Score = 26.7 bits (52), Expect(6) = 3e-41 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +3 / +2 Query: 363 RSC*PFNLLEEPQAYQ 410 R C F+LLE PQAYQ Sbjct: 2477 RPCQSFDLLE*PQAYQ 2524 Score = 25.4 bits (49), Expect(6) = 3e-41 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +2 / +3 Query: 326 SSTSRAPSNSTAAV 367 S TSRAPS+STA V Sbjct: 339 SCTSRAPSSSTAEV 380 Score = 39.1 bits (79), Expect(7) = 4e-23 Identities = 16/26 (61%), Positives = 17/26 (65%) Frame = -2 / -3 Query: 670 AGSMHAPRHQFPTKDTGLRLWSQEGP 593 AGS HAPRHQFPTK+ EGP Sbjct: 3752 AGSTHAPRHQFPTKEPSWPPSLPEGP 3675 Score = 37.7 bits (76), Expect(7) = 4e-23 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -3 / -2 Query: 774 QIKSRKHFLILLSCVFPVHHLPDV 703 Q S + L CVFPVHHLPDV Sbjct: 4509 QTTSSSRIFVHLPCVFPVHHLPDV 4438 Score = 33.6 bits (67), Expect(7) = 4e-23 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 / -2 Query: 365 PPPLNLMALWRWT 327 PPPLNLMALWR T Sbjct: 378 PPPLNLMALWRCT 340 Score = 33.6 bits (67), Expect(7) = 4e-23 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 / -1 Query: 231 QAHDLAGDGRLQRA 190 QAHDL GDGRLQRA Sbjct: 244 QAHDLPGDGRLQRA 203 Score = 31.3 bits (62), Expect(7) = 4e-23 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 / -2 Query: 595 PD*E*FQLKAFWPLYPKLAT 536 P *+ F LKA PLYPKLAT Sbjct: 2913 PG*QLFPLKASLPLYPKLAT 2854 Score = 29.5 bits (58), Expect(7) = 4e-23 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 / -3 Query: 468 KILINGPAKFAMRWLTTTLTDRLEVLPED*MVNMTAA 358 K + G K++ + DRLEV+PED M++M + Sbjct: 2582 KKVSGGRKKWSKLYGLDNYADRLEVIPEDRMIDMACS 2472 Score = 26.3 bits (51), Expect(7) = 4e-23 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -3 / -1 Query: 120 *GSLRGQRAERHG 82 *G RGQRAERHG Sbjct: 118 *GFPRGQRAERHG 80 Score = 42.3 bits (86), Expect(3) = 8e-05 Identities = 17/27 (62%), Positives = 22/27 (81%) Frame = +3 / +1 Query: 591 SGPSCDQRRKPVSFVGN*CLGACILPA 671 +GPS ++ + SFVGN*CLGAC+LPA Sbjct: 3673 AGPSGNEGGQLGSFVGN*CLGACVLPA 3753 Score = 26.7 bits (52), Expect(3) = 8e-05 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 / +1 Query: 539 G*LWIKRPKSFQ 574 G*LWIKR +SFQ Sbjct: 2857 G*LWIKRQRSFQ 2892 Score = 22.6 bits (43), Expect(3) = 8e-05 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +1 / +3 Query: 10 QIRPSHSPNPPRAHT 54 ++RPS +P P +HT Sbjct: 375 EVRPSPAPLTPSSHT 419 Score = 33.6 bits (67), Expect(2) = 0.089 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -3 / -1 Query: 657 MLPDINSQQRIQVCAFGHKRVL 592 MLPDINSQQR QV ++RVL Sbjct: 3739 MLPDINSQQRNQVGPLRYQRVL 3674 Score = 27.2 bits (53), Expect(2) = 0.089 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -2 / -2 Query: 460 HQWPSQVCHEV 428 HQWPSQV H V Sbjct: 2682 HQWPSQVLHVV 2650
>LOC_Os06g05110:12006.t00400:unspliced-genomic superoxide dismutase, chloroplast, putative, expressed| Length = 4147 Score = 37.3 bits (75), Expect(4) = 6e-07 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 / +3 Query: 418 GGEPPHGKLGWAIDEDFGSIEKLIKKMNAEGAALQGSGWVWL 543 GG P + I++DFGS ++ +L GSGWVWL Sbjct: 1587 GGGSPGRGVLQQIEKDFGSFTNFREEFIRSALSLLGSGWVWL 1712 Score = 32.7 bits (65), Expect(4) = 6e-07 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 / +3 Query: 193 ALEPAVSGEIMRLHHQKHHATYVANYNKAL 282 ALEP +S + LH KH YV + NK L Sbjct: 1179 ALEPYISKRTVELHWGKHQQDYVDSLNKQL 1268 Score = 25.4 bits (49), Expect(4) = 6e-07 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 / +3 Query: 646 VWEHAYYLQYK 678 V++HAYYL YK Sbjct: 2121 VFQHAYYLDYK 2153 Score = 22.6 bits (43), Expect(4) = 6e-07 Identities = 6/15 (40%), Positives = 10/15 (66%) Frame = +1 / +3 Query: 373 NHSIFWKNLKPISEG 417 NH FW++++P G Sbjct: 1551 NHHFFWESMQPEGGG 1595
>LOC_Os06g02500:12006.t00143:unspliced-genomic superoxide dismutase, chloroplast, putative, expressed| Length = 2696 Score = 43.2 bits (88), Expect(2) = 0.001 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +1 / +3 Query: 400 KPISEGGGEPPHGKLGWAIDEDFGSIEKLIKKMNAEGAALQGSGWVWL 543 + + GGG P +L I+ DFGS + +I++ + GSGWVWL Sbjct: 1143 RSMQPGGGGKPPERLLKFINRDFGSYDGMIRQFMDAASTQFGSGWVWL 1286 Score = 23.5 bits (45), Expect(2) = 0.001 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 / +3 Query: 622 LYPLLGIDVWE 654 L PLL ID+WE Sbjct: 1692 LQPLLAIDLWE 1724
>LOC_Os12g39970:12012.t03676:unspliced-genomic expressed protein| Length = 3091 Score = 33.6 bits (67), Expect = 2.0 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -3 / -3 Query: 114 SLRGQRAERHGWLCFGLWCACVCAWRIWGMGW 19 S RG+ A H L + W C C RIW W Sbjct: 803 SCRGRTASVHQPLRWWFWLGCCCISRIWTFHW 708
>LOC_Os12g39880:12012.t03667:unspliced-genomic expressed protein| Length = 2840 Score = 33.6 bits (67), Expect = 2.0 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -3 / -3 Query: 114 SLRGQRAERHGWLCFGLWCACVCAWRIWGMGW 19 S RG+ A H L + W C C RIW W Sbjct: 741 SCRGRTASVHQPLRWWFWLGCCCISRIWTFHW 646
>LOC_Os11g31070:12011.t02707:unspliced-genomic hypothetical protein| Length = 745 Score = 33.6 bits (67), Expect = 2.0 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -3 / +3 Query: 96 AERHGWLCFGLWCACVCAWRIW 31 A R G L G W C CAW+ W Sbjct: 588 ARRRGQLWRGSWTLCCCAWKQW 653
>LOC_Os06g21310:12006.t01948:unspliced-genomic glycine-rich cell wall structural protein precursor, putative| Length = 1017 Score = 31.3 bits (62), Expect(2) = 2.6 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -3 / +3 Query: 78 LCFGLWCACVCAWRIWGM 25 +C+ +WC C W IWG+ Sbjct: 915 VCWRIWCRCWLWWWIWGI 968 Score = 22.1 bits (42), Expect(2) = 2.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -2 / +1 Query: 868 PYSGVLPDFIIAYTKD 821 PY+GV P+F + Y D Sbjct: 532 PYTGV*PNF*LKYLYD 579
>LOC_Os03g50290:12003.t04371:unspliced-genomic 14-3-3-like protein S94, putative, expressed| Length = 4204 Score = 28.1 bits (55), Expect(2) = 2.7 Identities = 10/35 (28%), Positives = 20/35 (57%) Frame = -1 / -3 Query: 806 LKSEVLSVHSHKSNHASTFSYSSPAYFQFTTFQML 702 ++ + + ++ NH+ YSSP+ F +TF +L Sbjct: 1427 IRQQAQAFSMNERNHSQATKYSSPSPFH*STFSIL 1323 Score = 22.1 bits (42), Expect(2) = 2.7 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = -3 / -1 Query: 651 PDINSQQRIQVCAFGHKR 598 PD+ ++R + C F H+R Sbjct: 1243 PDLKLRKRQRHCCFFHRR 1190
>LOC_Os03g11360:12003.t00936:unspliced-genomic LAP4 protein, putative, expressed| Length = 3561 Score = 27.6 bits (54), Expect(2) = 2.7 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 / -2 Query: 114 SLRGQRAERHGWLCFGLWCACVC 46 S+R ++ RH L F C CVC Sbjct: 2627 SIRDRKVRRHRALMFVCVCVCVC 2559 Score = 22.6 bits (43), Expect(2) = 2.7 Identities = 5/8 (62%), Positives = 6/8 (75%) Frame = -3 / -3 Query: 60 CACVCAWR 37 C CVC W+ Sbjct: 2575 CVCVCVWQ 2552
>LOC_Os12g13320:12012.t01200:unspliced-genomic argininosuccinate synthase, chloroplast precursor, putative,| expressed Length = 4108 Score = 33.1 bits (66), Expect = 2.8 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 / +1 Query: 87 HGWLCFGLWCACVCAWRIW 31 +G C G WC C C+W W Sbjct: 2233 NG*CCKGSWCRCSCSWMHW 2289
>LOC_Os10g09790:12010.t00792:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2257 Score = 33.1 bits (66), Expect = 2.8 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 / -1 Query: 13 IRPSHSPNPPRAHTRTPET 69 +RPSH+P PP +R PET Sbjct: 229 VRPSHTPQPPLPLSRAPET 173
>LOC_Os12g11010:12012.t00978:unspliced-genomic hypothetical protein| Length = 1797 Score = 25.8 bits (50), Expect(2) = 2.8 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = -3 / +2 Query: 84 GWLCFGLWCACVC 46 GWL LW C+C Sbjct: 1202 GWLAMDLWRECMC 1240 Score = 24.4 bits (47), Expect(2) = 2.8 Identities = 7/18 (38%), Positives = 8/18 (44%) Frame = -3 / +2 Query: 60 CACVCAWRIWGMGWTDLD 7 C C C W W D+D Sbjct: 1232 CMCRCCWYSWAERLLDVD 1285
>LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like protein pDIR7, putative, expressed| Length = 727 Score = 32.7 bits (65), Expect = 3.8 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = -3 / +1 Query: 60 CACVCAWRIWGMGWTDLDAA 1 C C CAWR W WT AA Sbjct: 70 CFCYCAWRRWRGRWTTAAAA 129
>LOC_Os09g08770:12009.t00671:unspliced-genomic hypothetical protein| Length = 3677 Score = 32.7 bits (65), Expect = 3.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 / +2 Query: 21 IPFPKSSTRTHTHTRDQNTTSHGAPHV 101 +P P + TRTHTHT+ +N HV Sbjct: 2309 LPHPSTPTRTHTHTKKKNEHPLFGSHV 2389
>LOC_Os01g36280:12001.t03177:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8630 Score = 32.7 bits (65), Expect = 3.8 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -1 / -1 Query: 872 GPLQWSTARFYYCIYKRSNSRKLKSEVLSVHSHKSNHASTFSYSSPAY 729 G + AR + + S S + +L + ++ HAS+FSYSSP Y Sbjct: 593 GKYHITLARILFFVSCPSTSARSSRLILYRSTLQTGHASSFSYSSPRY 450
>LOC_Os05g43480:12005.t03839:unspliced-genomic UBP25, putative, expressed| Length = 5770 Score = 30.4 bits (60), Expect(2) = 4.9 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 / +2 Query: 112 SSWPTCGAPWLVVFWSLVCVC 50 S W C L FWSL+CVC Sbjct: 3131 SFWQYCSLRVLSRFWSLLCVC 3193 Score = 24.4 bits (47), Expect(2) = 4.9 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = -1 / +2 Query: 674 YCR*YACSQTSIPNKGYRFAPLVTRGS*LGVVSTESFLASLSKASHTHP 528 Y R AC Q + +G L + L S S A L+ HT P Sbjct: 632 YVRLLACRQEGVAEQGQGVCVLCGGTADLAAASDRSRGARLASEDHTLP 778
>LOC_Os11g18640:12011.t01635:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4916 Score = 32.2 bits (64), Expect = 5.2 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -1 / -2 Query: 872 GPLQWSTARFYYCIYKRSNSRKLKSEVLSVHSHKSNHASTFSYSSPAY 729 G + AR ++ I S S +L + ++ HAS+FSYSSP Y Sbjct: 2410 GKYHITLARIFFFIGCPSTSPGSSRLILYRSALQTGHASSFSYSSPRY 2267
>LOC_Os08g13640:12008.t01240:unspliced-genomic ankyrin-like protein, putative, expressed| Length = 8490 Score = 32.2 bits (64), Expect = 5.2 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 / +3 Query: 7 IQIRPSHSPNPPRAHTRTPETKTQPA 84 + +R + +P PPRA TRTP+T T+ A Sbjct: 159 VLLR*APTPPPPRALTRTPKTLTKSA 236
>LOC_Os06g09540:12006.t00833:unspliced-genomic phosphoinositide 5-phosphatase, putative, expressed| Length = 10278 Score = 32.2 bits (64), Expect = 5.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 / +1 Query: 9 PDPSIPFPKSSTRTHTHTRDQNT 77 P P I P + TRTHTHT++ ++ Sbjct: 9370 P*PQINIPHTHTRTHTHTKNSSS 9438
>LOC_Os05g25360:12005.t02192:unspliced-genomic hypothetical protein| Length = 601 Score = 32.2 bits (64), Expect = 5.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 / -1 Query: 16 RPSHSPNPPRAHTRTPETKTQPA 84 R H P PPR H RTP + PA Sbjct: 112 RGDHPPPPPRHHHRTPRSALPPA 44
>LOC_Os08g45160:12008.t04237:unspliced-genomic TENA/THI-4 family protein, expressed| Length = 4515 Score = 28.6 bits (56), Expect(2) = 5.3 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +1 / +2 Query: 16 RPSHSPNPPRAHTRTPETKTQPAM 87 RPS SP+PP P T P M Sbjct: 383 RPSSSPSPPGPSAWIPSANTSPRM 454 Score = 25.8 bits (50), Expect(2) = 5.3 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = +2 / +1 Query: 755 CLRDLICENGQTVP 796 CL +IC NG+++P Sbjct: 1360 CLNYIICRNGESIP 1401
>LOC_Os07g07646:12007.t04721:unspliced-genomic expressed protein| Length = 2769 Score = 25.4 bits (49), Expect(3) = 5.4 Identities = 5/6 (83%), Positives = 5/6 (83%) Frame = -1 / +1 Query: 248 WCFWWC 231 WC WWC Sbjct: 196 WCCWWC 213 Score = 24.9 bits (48), Expect(3) = 5.4 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = -3 / +3 Query: 51 VCAWRIWGMGW 19 +C W IW GW Sbjct: 2640 LCRWFIWNCGW 2672 Score = 22.1 bits (42), Expect(3) = 5.4 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -1 / +3 Query: 578 STESFLASLSKASHTHPDP 522 S+ S SLS + THP P Sbjct: 9 SSSSCCCSLSSKAPTHPGP 65
>LOC_Os04g40670:12004.t03628:unspliced-genomic expressed protein| Length = 3044 Score = 26.7 bits (52), Expect(3) = 6.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +3 / +1 Query: 831 YAIIKSGSTPL*GPFYSKKKK 893 YAI+ + T +* PF+ KKK+ Sbjct: 1294 YAIVVTSRTTI*HPFFRKKKQ 1356 Score = 23.1 bits (44), Expect(3) = 6.3 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1 / +3 Query: 13 IRPSHSPNPP 42 +RPSH NPP Sbjct: 27 LRPSHPSNPP 56 Score = 22.6 bits (43), Expect(3) = 6.3 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +2 / +3 Query: 812 GCWIFCICNNKI 847 G W+ CIC + I Sbjct: 501 GSWVHCICTSLI 536
>LOC_Os08g06890:12008.t00579:unspliced-genomic hypothetical protein| Length = 1769 Score = 31.8 bits (63), Expect = 7.2 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 / +3 Query: 663 LPAVQEREAGLPDQHLEGGELEIRR 737 LPA+Q+ GLP QHL +L RR Sbjct: 564 LPALQQEHPGLPPQHLSRRQLRGRR 638
>LOC_Os05g22940:12005.t01953:unspliced-genomic acetyl-coenzyme A carboxylase, putative, expressed| Length = 13930 Score = 31.8 bits (63), Expect = 7.2 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -1 / +2 Query: 152 TPLRAPPSARPRVLFVANVRSAMAGCVLVSGVRVCARGGFGE 27 TP+RA P + PRV +A V + + G + V G G GE Sbjct: 302 TPIRARPVSPPRVSAIAAVSALLGGGLDVGGGSRVLLSGMGE 427
>LOC_Os04g59600:12004.t05416:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed| Length = 4431 Score = 31.8 bits (63), Expect = 7.2 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +1 / +2 Query: 31 PNPPRAHTRTPETKTQPA 84 P PPR+HTR+P T PA Sbjct: 170 PPPPRSHTRSPTKATPPA 223
>LOC_Os03g37470:12003.t03205:unspliced-genomic transparent testa 12 protein, putative, expressed| Length = 9984 Score = 31.8 bits (63), Expect = 7.2 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +3 / -3 Query: 6 HPDPSIPFPKSSTRTHTHTRDQNTTSHGAP 95 HP P +P R H R Q+ T+ GAP Sbjct: 160 HPPPPLPSSSCCCRRRRHARRQSPTTTGAP 71
>LOC_Os08g24230:12008.t02193:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3648 Score = 26.7 bits (52), Expect(2) = 8.0 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -3 / -2 Query: 750 LILLSCVFPVHHLPDVG 700 L+ L C FP+ HLP +G Sbjct: 2936 LLTLMCSFPLDHLPRLG 2886 Score = 26.7 bits (52), Expect(2) = 8.0 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = -3 / -1 Query: 105 GQRAERHGWLCFGLWCACV 49 G R + W C LWC C+ Sbjct: 267 GMRGLQGCWRCADLWCECL 211
>LOC_Os04g40070:12004.t03572:unspliced-genomic GRAM domain containing protein, expressed| Length = 4518 Score = 28.6 bits (56), Expect(2) = 9.6 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +1 / -3 Query: 19 PSHSPNPPRAHTRTPETKTQPAM 87 P SP+PP RTP + PAM Sbjct: 2974 PCSSPSPPGGPRRTPPSADPPAM 2906 Score = 24.9 bits (48), Expect(2) = 9.6 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 / -3 Query: 600 SCDQRRKPVSFVGN*CLGACIL 665 SCD+RR VS V C AC++ Sbjct: 724 SCDKRRYIVSIVMTLC*FACLV 659
>LOC_Os10g31330:12010.t02459:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 1267 Score = 31.3 bits (62), Expect = 9.9 Identities = 8/17 (47%), Positives = 9/17 (52%) Frame = -3 / +1 Query: 81 WLCFGLWCACVCAWRIW 31 W LWC C WR+W Sbjct: 499 WARLWLWCRCWWCWRVW 549
>LOC_Os06g28330:12006.t02537:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4365 Score = 31.3 bits (62), Expect = 9.9 Identities = 16/48 (33%), Positives = 19/48 (39%) Frame = -1 / +2 Query: 146 LRAPPSARPRVLFVANVRSAMAGCVLVSGVRVCARGGFGEWDGRIWMP 3 L +P S RPR + R +A V S R C R W R P Sbjct: 326 LHSPSSPRPRRRGTRSRRCELASIVSASRRRKCCRSSMMRWSSRTGRP 469
>LOC_Os04g49290:12004.t04445:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4364 Score = 31.3 bits (62), Expect = 9.9 Identities = 16/48 (33%), Positives = 19/48 (39%) Frame = -1 / +2 Query: 146 LRAPPSARPRVLFVANVRSAMAGCVLVSGVRVCARGGFGEWDGRIWMP 3 L +P S RPR + R +A V S R C R W R P Sbjct: 326 LHSPSSPRPRRRGTRSRRCELASIVSASRRRKCCRSSMMRWSSRTGRP 469
>LOC_Os03g57290:12003.t04996:unspliced-genomic cullin-4B, putative, expressed| Length = 6969 Score = 31.3 bits (62), Expect = 9.9 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -3 / +1 Query: 63 WCACVCAWRIWGMGW 19 +C CVC + WG GW Sbjct: 2221 YCVCVCVFFFWGGGW 2265
>LOC_Os02g12290:12002.t01027:unspliced-genomic nuclear ribonuclease Z, putative| Length = 1895 Score = 31.3 bits (62), Expect = 9.9 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 / +3 Query: 19 PSHSPNPPRAHTRTPETKTQP 81 P H P PPR H R P + P Sbjct: 213 PLHLPRPPRPHRRPPHVRRHP 275
>LOC_Os02g04340:12002.t00333:unspliced-genomic NIN-like protein 2, putative, expressed| Length = 2759 Score = 31.3 bits (62), Expect = 9.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +3 / -2 Query: 9 PDPSIPFPKSSTRTHTHTRDQNTTSHG 89 P P+IP P + TH Q +SHG Sbjct: 352 PSPAIPLPLPRSHLRTHAYKQTPSSHG 272
>LOC_Os02g03980:12002.t00297:unspliced-genomic F-box protein interaction domain containing protein| Length = 1185 Score = 31.3 bits (62), Expect = 9.9 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 / +2 Query: 16 RPSHSPNPPRAHTRTPETKTQPA 84 RP HSP RA RTP ++ PA Sbjct: 857 RPRHSPTGARAAGRTPSRRSSPA 925
>LOC_Os01g57890:12001.t05190:unspliced-genomic ATML1, putative, expressed| Length = 6636 Score = 31.3 bits (62), Expect = 9.9 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 / -1 Query: 21 IPFPKSSTRTHTHTRDQNTTSHG 89 +PF + T THTHT N T+ G Sbjct: 5172 LPFVLTETHTHTHTHAHNKTTKG 5104
>LOC_Os01g56490:12001.t05058:unspliced-genomic ubiquitin carboxyl-terminal hydrolase 21, putative, expressed| Length = 17146 Score = 31.3 bits (62), Expect = 9.9 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -1 / +2 Query: 857 STARFYYCIYKRSNSRKLKSEVLSVHSHK 771 ST+RF + I SN RKL S+V V HK Sbjct: 1259 STSRFTWTIEDFSNHRKLYSDVFVVGGHK 1345
>LOC_Os01g03390:12001.t00231:unspliced-genomic Bowman-Birk type bran trypsin inhibitor precursor, putative,| expressed Length = 996 Score = 31.3 bits (62), Expect = 9.9 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = -1 / -3 Query: 248 WCFWWCRR 225 WC+WWCRR Sbjct: 193 WCWWWCRR 170 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 315,485,471 Number of extensions: 4732896 Number of successful extensions: 27741 Number of sequences better than 10.0: 39 Length of query: 298 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 249 Effective length of database: 52,856,264 Effective search space: 13161209736 Effective search space used: 13161209736 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
